HHsearch alignment for GI: 254781016 and conserved domain: PTZ00298
>PTZ00298 mevalonate kinase; Provisional.
Probab=99.40 E-value=1e-09 Score=88.29 Aligned_cols=212 Identities=15% Similarity=0.191 Sum_probs=130.2
Q ss_pred EEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH------C--CC-CCHHHHCCCCHHCCCCCCC
Q ss_conf 3999985023321101232247999999999981889998899988652------1--35-3034310562002578987
Q gi|254781016|r 107 YFLIETSNNIPTKAGLASSASGFAALTLALFRIYSIPEKSESLSRVARL------G--SG-SACRSFYRGFCEWICGTDQ 177 (355)
Q Consensus 107 ~~~I~S~N~fPtaaGLASSASgfAALa~Al~~~~~~~~~~~~lS~lARl------G--SG-SA~RSi~GG~v~W~~g~~~ 177 (355)
T Consensus 94 g~~i~i~S~iP~gaGLGSSAAv~VA~~~Al~~~~~~~ls~~~i~~~A~~~E~~~hG~pSGiD~~~s~~Gg~i~f~~~~~~ 173 (328)
T PTZ00298 94 GLKMHLGGPLVPSSGIGASASDVVSLSRALSELYQLNLTEEEVNLSAFVGEGGYHGTPSGADNTAATYGGLISYRRVNGK 173 (328)
T ss_pred CEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEEEECCCC
T ss_conf 53899705888656735068899999999999847999999999999999998558997276999945987999854886
Q ss_pred CCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHH----HC-HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
Q ss_conf 654413101566686421589997287667521056798876----18-5689999730550999999998099999999
Q gi|254781016|r 178 NGMDSFAVPFNNQWPDLRIGLLKIIDREKKIGSREAMEITRH----HS-PFFTQWTQQISTDLAHIKQAIIDQDFIKLGE 252 (355)
Q Consensus 178 ~~sds~a~~~~~~~~dl~~~i~iv~~~~K~vsSt~gm~~~v~----tS-p~y~~r~~~~~~~~~~~~~ai~~~Df~~l~~ 252 (355)
T Consensus 174 ~~~~--~i~~~-----~~~~lvi~dtg~~--~~T~~~V~~V~~~~~~~p~~~~~i~~~~~~iv~~a~~aL~~~d~~~lG~ 244 (328)
T PTZ00298 174 SVFK--RIAFQ-----QPLYLVVCSTGIT--ASTTKVVGDVRKLKENQPTWFNRLLENYNACVSEAKEALQKGNLFRVGE 244 (328)
T ss_pred CCCE--ECCCC-----CCCEEEEEECCCC--CCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
T ss_conf 4420--23678-----9706999836986--5369999999999865869999999999999999999986489999999
Q ss_pred HHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHCC-CEEEEEECCCC--EEEEEECH-HHHHHHHHHHHHCCCC
Q ss_conf 99999998999870389956865788999999999974289-61999977798--17999558-9899999997632100
Q gi|254781016|r 253 VAEKNALKMHATMIAASPPLLYWQKETIQGMERVWDARQQS-IPIYFTLDAGP--NLKLLFTH-KIEETIKQFFPEITII 328 (355)
Q Consensus 253 i~e~dal~mHa~~~~s~P~~~Y~~~~t~~ii~~v~~~R~~g-~~v~fT~DAGP--Nv~il~~~-~~~~~i~~~l~~i~~~ 328 (355)
T Consensus 245 Lm~~n----h~lL~~l--gVS--~p~Ld~l---v~~a~~~GAlGAKLT-GAG~GGcvIaL~~~~~~a~~i~~al~~~~~- 311 (328)
T PTZ00298 245 LMNAN----HDLCQKL--TVS--CRELDSI---VQTCRTYGALGAKMS-GTGRGGLVVALAASEDQRDAIAKAVRARCP- 311 (328)
T ss_pred HHHHH----HHHHHHC--CCC--CHHHHHH---HHHHHHCCCCEEEEC-CCCCCCEEEEECCCHHHHHHHHHHHHHHCC-
T ss_conf 99999----9989746--889--7899999---999997699655751-468875899983866669999999997466-
Q ss_pred CCCCCCCCCCCCCCC
Q ss_conf 368887512000002
Q gi|254781016|r 329 DPLDSPDLWSTKDSL 343 (355)
Q Consensus 329 ~~~~~~~~~~~~~~~ 343 (355)
T Consensus 312 --~-a~~~w~~~~~~ 323 (328)
T PTZ00298 312 --E-AKFVWRYTVQP 323 (328)
T ss_pred --C-CCCEEEEEECC
T ss_conf --7-73059999556