HHsearch alignment for GI: 254781016 and conserved domain: PTZ00299
>PTZ00299 homoserine kinase; Provisional.
Probab=99.40 E-value=7.2e-11 Score=96.37 Aligned_cols=292 Identities=15% Similarity=0.163 Sum_probs=169.8
Q ss_pred CCCCEEEECCCCEEEEECCCCCCHHHCCCCCCCEEEEECCCCEEEEEEECCCCCCEEEECCEE---CCCCC-H-HHHHHH
Q ss_conf 776378974884248811677670117578984346812781079999717888579987872---56652-0-689999
Q gi|254781016|r 20 INEKSSAFLPSNIALCKYWGKRDSKLNLPLNNSLSLSLGHLGTITHITVIDSDADCIILNGQK---ISSQS-S-FFKKTT 94 (355)
Q Consensus 20 ~~~~~ta~ap~NIALIKYWGK~d~~l~lP~n~SiS~TL~~~~T~T~v~~~~~~~d~~~lnG~~---~~~~~-~-~~~ri~ 94 (355)
T Consensus 4 ~~~kV~V~VPATsA-----------NLGpGFD~LGlAL~-ly~ev~v~~--~~~~~i~i~g~g~~~ip~d~~Nlv~~a~~ 69 (336)
T PTZ00299 4 LPKKVVLRVPATTA-----------NIGPAYDTLGMALS-IFMELTVEH--ADAFSMTVEGEGSEHISTDEDNMVVQACR 69 (336)
T ss_pred CCCEEEEEECCCHH-----------HCCCCHHHHHHHCC-CCCEEEEEE--CCCCEEEEEECCCCCCCCCCCCHHHHHHH
T ss_conf 89759999674446-----------44523675253036-774899998--89717999706777799996114999999
Q ss_pred HHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC---CHHHHHHHHHHCCC---CCHHHHCCCC
Q ss_conf 99742167619439999850233211012322479999999999818899---98899988652135---3034310562
Q gi|254781016|r 95 QFCDLFRQFSKVYFLIETSNNIPTKAGLASSASGFAALTLALFRIYSIPE---KSESLSRVARLGSG---SACRSFYRGF 168 (355)
Q Consensus 95 ~~l~~~r~~~~~~~~I~S~N~fPtaaGLASSASgfAALa~Al~~~~~~~~---~~~~lS~lARlGSG---SA~RSi~GG~ 168 (355)
T Consensus 70 ~~~~~~~~~~~~~~~i~i~~~IP~~rGLGSSAaAiVaG~~aan~L~g~~l~~~~~~~ll~~a~~~EgHPDNVAPAllGG~ 149 (336)
T PTZ00299 70 LAFEEYAHKSMPPLKFIMHSNIPYGCGCGSSSAAAVAGFVAGMKLCGLTMETENEEALLQAIAKFEGHPDNAAPAIYGGI 149 (336)
T ss_pred HHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCE
T ss_conf 99998569788963899836888766751388999999999998626887755899999987621689745543245886
Q ss_pred HH-CCCCCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCH
Q ss_conf 00-25789876544131015666864215899972876675210567988761856899997305509999999980999
Q gi|254781016|r 169 CE-WICGTDQNGMDSFAVPFNNQWPDLRIGLLKIIDREKKIGSREAMEITRHHSPFFTQWTQQISTDLAHIKQAIIDQDF 247 (355)
Q Consensus 169 v~-W~~g~~~~~sds~a~~~~~~~~dl~~~i~iv~~~~K~vsSt~gm~~~v~tSp~y~~r~~~~~~~~~~~~~ai~~~Df 247 (355)
T Consensus 150 ~l~~~~~--~~~~~~~~ip~p---~~l~~Vv~iP~~~~~--lsT~~AR~vLP~~v~~~daV-~n~~r~a~lv~al~~~d~ 221 (336)
T PTZ00299 150 QLVYKKD--NGRFLTYRVPTP---PNLSVVLFVPHNKMK--ANTHVTRNLIPTSVSLEDAV-FNISRTSILVLALSTGDL 221 (336)
T ss_pred EEEEECC--CCCEEEEECCCC---CCCEEEEEECCCCCE--ECHHHHHHHCCCCCCHHHHH-HHHHHHHHHHHHHHCCCH
T ss_conf 9999728--982799977999---884899997897633--06899996586768899999-999999999999954989
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHCC-CEEEEEECCCCEEEEEEC------------HHH
Q ss_conf 9999999999998999870389956865788999999999974289-619999777981799955------------898
Q gi|254781016|r 248 IKLGEVAEKNALKMHATMIAASPPLLYWQKETIQGMERVWDARQQS-IPIYFTLDAGPNLKLLFT------------HKI 314 (355)
Q Consensus 248 ~~l~~i~e~dal~mHa~~~~s~P~~~Y~~~~t~~ii~~v~~~R~~g-~~v~fT~DAGPNv~il~~------------~~~ 314 (355)
T Consensus 222 ~ll~-~~-~D--~ihepyR~~-----~LiP~~~~v~~~a---~~aGA~g~~iS-GAGPTi~Al~~g~~~~~~~~~~~~~~ 288 (336)
T PTZ00299 222 RMLK-SC-SD--KLHEQQRSD-----ALFPHFRPCVKAA---REAGAHYAFLS-GAGPSVCALVGGRHGDPLTQPREERK 288 (336)
T ss_pred HHHH-HC-CC--EEECCCHHH-----HCCCCHHHHHHHH---HHCCCEEEEEE-CHHHHHHEEECCCCCCCCCCCCHHHH
T ss_conf 8997-48-73--486520233-----2262799999999---87899499997-64222442621556653224410345
Q ss_pred HHHHH----HHHHHCCC-----CCCCCCCCCCCCCCCCCCC
Q ss_conf 99999----99763210-----0368887512000002432
Q gi|254781016|r 315 EETIK----QFFPEITI-----IDPLDSPDLWSTKDSLSQK 346 (355)
Q Consensus 315 ~~~i~----~~l~~i~~-----~~~~~~~~~~~~~~~~~~~ 346 (355)
T Consensus 289 a~~V~~aM~~a~~~~gi~~~~~i~~~~~~G~~vi~~~~~~~ 329 (336)
T PTZ00299 289 AESVAEAMIKAAEAVGVAGRVIITQPSDQGVHLVGTTCIRP 329 (336)
T ss_pred HHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEECCCCCCC
T ss_conf 99999999999998698458999346778878965645678