HHsearch alignment for GI: 254781016 and conserved domain: pfam08544
>pfam08544 GHMP_kinases_C GHMP kinases C terminal. This family includes homoserine kinases, galactokinases and mevalonate kinases.
Probab=96.44 E-value=0.021 Score=37.19 Aligned_cols=75 Identities=23% Similarity=0.177 Sum_probs=53.9
Q ss_pred HHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHCCCEEEEEECC--CCEEEEEE-CHHHH
Q ss_conf 9999809999999999999998999870389956865788999999999974289619999777--98179995-58989
Q gi|254781016|r 239 KQAIIDQDFIKLGEVAEKNALKMHATMIAASPPLLYWQKETIQGMERVWDARQQSIPIYFTLDA--GPNLKLLF-THKIE 315 (355)
Q Consensus 239 ~~ai~~~Df~~l~~i~e~dal~mHa~~~~s~P~~~Y~~~~t~~ii~~v~~~R~~g~~v~fT~DA--GPNv~il~-~~~~~ 315 (355)
T Consensus 2 ~~~l~~~d~~~~~~~~~~~~~~---------~~~~~~~~~i~~~~---~~~~~~G~~~a~~sGsg~G~~v~~l~~~~~~a 69 (82)
T pfam08544 2 LEALREGDLELLGELLNENALL---------LYLGILSPELDELL---EELRELGALGAKLSGSGGGPTVFALFKDEEDA 69 (82)
T ss_pred HHHHHCCCHHHHHHHHHHHHHC---------CHHHCCCHHHHHHH---HHHHHCCCCEEECCCCCCCCEEEEEECCHHHH
T ss_conf 3788818999999999999864---------05505778899999---99998599855412589888588885898999
Q ss_pred HHHHHHHHHC
Q ss_conf 9999997632
Q gi|254781016|r 316 ETIKQFFPEI 325 (355)
Q Consensus 316 ~~i~~~l~~i 325 (355)
T Consensus 70 ~~i~~~l~~~ 79 (82)
T pfam08544 70 EEVAEALREA 79 (82)
T ss_pred HHHHHHHHHH
T ss_conf 9999999987