HHsearch alignment of GI: 254781016 and MMDB domain: 1fi4_A_1-31_62-178_398-416
>1fi4_A (A:1-31,A:62-178,A:398-416) Mevalonate 5-diphosphate decarboxylase; mixed alpha/beta structure, ATP binding, cholesterol biosynthesis, structural genomics, PSI; 2.27A {Saccharomyces cerevisiae}
Probab=99.02 E-value=3.2e-09 Score=84.40 Aligned_cols=121 Identities=35% Similarity=0.454 Sum_probs=89.0
Q ss_pred EEEEC-CCCEEEEEEECCC-CCCEEEECCEECCCCCHHHHH--------HHHHHHHHHHH---CCCEEEEEEECCCCCCC
Q ss_conf 46812-7810799997178-885799878725665206899--------99997421676---19439999850233211
Q gi|254781016|r 54 SLSLG-HLGTITHITVIDS-DADCIILNGQKISSQSSFFKK--------TTQFCDLFRQF---SKVYFLIETSNNIPTKA 120 (355)
Q Consensus 54 S~TL~-~~~T~T~v~~~~~-~~d~~~lnG~~~~~~~~~~~r--------i~~~l~~~r~~---~~~~~~I~S~N~fPtaa 120 (355)
|+|-- +++++++++..+. ....+.+|+...........+ +.+.+..+... ....++|...+++|.++
T Consensus 27 ~~~~~idl~~~vti~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~I~i~s~IP~g~ 106 (167)
T 1fi4_A 27 SVTAPDDLRTLTSAATAPEFERDTLWLNGEPHSIDNERTQNCLRDLRQLRKEXESKDASLPTLSQWKLHIVSENNFPTAA 106 (167)
T ss_dssp EEEECTTSCEEEEEEECTTCCSCBCTTTCCBSSSSSSSHHHHHHHHHHHHHHHHTTCTTSCCGGGSCEEEEEEECCCTTS
T ss_pred EEECCCCCEEEEEEEECCCCCCCEEEECCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHH
T ss_conf 99750897789999978887664599899735652067888999999999887543342343447318999707872055
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHCCCCHHCCCC
Q ss_conf 012322479999999999818899988999886521353034310562002578
Q gi|254781016|r 121 GLASSASGFAALTLALFRIYSIPEKSESLSRVARLGSGSACRSFYRGFCEWICG 174 (355)
Q Consensus 121 GLASSASgfAALa~Al~~~~~~~~~~~~lS~lARlGSGSA~RSi~GG~v~W~~g 174 (355)
||+|||+..+|++.|++++++++++.+++..+|+.+......++.||++.+-.+
T Consensus 107 GLGSSAA~~VA~~~Al~~~~g~~Ls~~eLa~la~~~E~~v~g~~~G~~d~~a~~ 160 (167)
T 1fi4_A 107 GLASSAAGFAALVSAIAKLYQLPQSTSEISRIARKGSGSACRGPQETNESLIDA 160 (167)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTCCSCHHHHHHHHHHHHGGGGGCCEECSCCSSCS
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHCCCCCCHHHCCC
T ss_conf 677779999999987778644689989999996526714265987630640378