HHsearch alignment of GI: 254781016 and MMDB domain: 1fi4_A_32-61_179-397
>1fi4_A (A:32-61,A:179-397) Mevalonate 5-diphosphate decarboxylase; mixed alpha/beta structure, ATP binding, cholesterol biosynthesis, structural genomics, PSI; 2.27A {Saccharomyces cerevisiae}
Probab=100.00 E-value=0 Score=470.33 Aligned_cols=195 Identities=29% Similarity=0.567 Sum_probs=185.9
Q ss_pred CCEEEEECCCCCCHHHCCCCCCCEEEEECCCCEEEEEEECCCCCCEEEECCEECCCCCHHHHHHHHHHHHHHHHCCCEEE
Q ss_conf 84248811677670117578984346812781079999717888579987872566520689999997421676194399
Q gi|254781016|r 30 SNIALCKYWGKRDSKLNLPLNNSLSLSLGHLGTITHITVIDSDADCIILNGQKISSQSSFFKKTTQFCDLFRQFSKVYFL 109 (355)
Q Consensus 30 ~NIALIKYWGK~d~~l~lP~n~SiS~TL~~~~T~T~v~~~~~~~d~~~lnG~~~~~~~~~~~ri~~~l~~~r~~~~~~~~ 109 (355)
.||||||||||||+++|||+|+|||+|||
T Consensus 1 vNIAliKYWGKrd~~l~lP~n~SlS~TL~--------------------------------------------------- 29 (249)
T 1fi4_A 1 VNIATLKYWGKRDTKLNLPTNSSISVTLS--------------------------------------------------- 29 (249)
T ss_dssp CEEEEECCCCEEETTTTEESSCEEEEEBC---------------------------------------------------
T ss_pred CCEEEEECCCCCCCCCCCCCCCEEEEEEC---------------------------------------------------
T ss_conf 50457622577688778889983668934---------------------------------------------------
Q ss_pred EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHCCCCHHCCCCCCCCCCCEEEEECC-
Q ss_conf 9985023321101232247999999999981889998899988652135303431056200257898765441310156-
Q gi|254781016|r 110 IETSNNIPTKAGLASSASGFAALTLALFRIYSIPEKSESLSRVARLGSGSACRSFYRGFCEWICGTDQNGMDSFAVPFN- 188 (355)
Q Consensus 110 I~S~N~fPtaaGLASSASgfAALa~Al~~~~~~~~~~~~lS~lARlGSGSA~RSi~GG~v~W~~g~~~~~sds~a~~~~- 188 (355)
+|+|||||+|++|.++|++||||+++.
T Consensus 30 ----------------------------------------------------~Si~GGfv~W~~G~~~dg~dS~A~~i~~ 57 (249)
T 1fi4_A 30 ----------------------------------------------------QSLFGGYVAWEXGKAEDGHDSXAVQIAD 57 (249)
T ss_dssp ----------------------------------------------------TGGSSSEEEEECCSCTTCTTCEEEEEEC
T ss_pred ----------------------------------------------------CHHHCCEEEECCCCCCCCCCCEEEECCC
T ss_conf ----------------------------------------------------8541884884278888877723566466
Q ss_pred -CCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHCHHHHHHHHH-HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf -668642158999728766752105679887618568999973-055099999999809999999999999998999870
Q gi|254781016|r 189 -NQWPDLRIGLLKIIDREKKIGSREAMEITRHHSPFFTQWTQQ-ISTDLAHIKQAIIDQDFIKLGEVAEKNALKMHATMI 266 (355)
Q Consensus 189 -~~~~dl~~~i~iv~~~~K~vsSt~gm~~~v~tSp~y~~r~~~-~~~~~~~~~~ai~~~Df~~l~~i~e~dal~mHa~~~ 266 (355)
+|||||++++++|++++|+|+||+||+++++|||||+.|++. ++.++.+|++||+++||++||+++|+|+++|||+||
T Consensus 58 ~~~w~dl~iii~vv~~~~K~vsSt~gM~~~~~TS~~y~~w~~~~a~~~l~~~~~Ai~~~Df~~~~ei~e~ds~~mHA~~l 137 (249)
T 1fi4_A 58 SSDWPQXKACVLVVSDIKKDVSSTQGXQLTVATSELFKERIEHVVPKRFEVXRKAIVEKDFATFAKETXXDSNSFHATCL 137 (249)
T ss_dssp GGGSTTEEEEEEEECCCSCCCCHHHHHHHHHHHCSHHHHHHHTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHEEEEEEECCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 43310110699994388776652577777765282357899987899999999999808999999999999999999985
Q ss_pred CCCCCEEEECHHHHHHHHHHHHHHH--CCCEEEEEECCCCEEEEEECHHHHHHHHHHHHHCCC
Q ss_conf 3899568657889999999999742--896199997779817999558989999999763210
Q gi|254781016|r 267 AASPPLLYWQKETIQGMERVWDARQ--QSIPIYFTLDAGPNLKLLFTHKIEETIKQFFPEITI 327 (355)
Q Consensus 267 ~s~P~~~Y~~~~t~~ii~~v~~~R~--~g~~v~fT~DAGPNv~il~~~~~~~~i~~~l~~i~~ 327 (355)
++.|||+||+|+|+++|+.|+++|+ +|++|||||||||||||||++++++.|.+++.+...
T Consensus 138 ~s~Pp~~Y~~~~S~~ii~~V~~lr~~~~g~~v~yT~DAGPNv~vl~~~~~~~~i~~~l~~~f~ 200 (249)
T 1fi4_A 138 DSFPPIFYXNDTSKRIISWCHTINQFYGETIVAYTFDAGPNAVLYYLAENESKLFAFIYKLFG 200 (249)
T ss_dssp TSSSCCCCCCHHHHHHHHHHHHHHHHHTSCCEEEEECSSSCEEEEEEGGGHHHHHHHHHHHHT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEECHHHHHHHHHHHHHHCC
T ss_conf 479974876760899999999999865895189995788667999656349999999999758