HHsearch alignment of GI: 254781016 and MMDB domain: 2v8p_A_1-158
>2v8p_A (A:1-158) 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; nucleotide-binding, isoprene biosynthesis, transferase, ATP-binding, non-mevalonate; HET: CDP ADP; 2.1A {Aquifex aeolicus} PDB: 2v2v_A* 2v2q_A* 2v34_A* 2v2z_A* 2vf3_A*
Probab=99.01 E-value=1e-08 Score=80.81 Aligned_cols=142 Identities=17% Similarity=0.134 Sum_probs=96.8
Q ss_pred CCEEEECCCCEEEEE-CCCCCCHHHCCCCCC--CEEEEECCCCEEEEEEECCCCCCEEEECCEECCCCCHHHHHHHHHHH
Q ss_conf 637897488424881-167767011757898--43468127810799997178885799878725665206899999974
Q gi|254781016|r 22 EKSSAFLPSNIALCK-YWGKRDSKLNLPLNN--SLSLSLGHLGTITHITVIDSDADCIILNGQKISSQSSFFKKTTQFCD 98 (355)
Q Consensus 22 ~~~ta~ap~NIALIK-YWGK~d~~l~lP~n~--SiS~TL~~~~T~T~v~~~~~~~d~~~lnG~~~~~~~~~~~ri~~~l~ 98 (355)
...+++||.||-|=- -.|.+... .+. ++.+++ +. .+.+++.+..++.+.+.+... .. ..+.+.++
T Consensus 3 ~~i~~~aPari~l~~~~~g~~~~~----~~~~~~~~~~i-~~--~~~~~v~~~~~~~~~~~~~~~--~~---~~~~~~~~ 70 (158)
T 2v8p_A 3 HMIKVLSPAKINLGLWVLGRLPSG----YHEILTLYQEI-PF--YDEIYIREGVLRVETNIGIPQ--EE---NLVYKGLR 70 (158)
T ss_dssp CCEEEEEEEEEEEEEEEEEECTTS----CEEEEEEEEEE-EE--EEEEEEEESSCEEEESSCCCT--TT---CHHHHHHH
T ss_pred CEEEEEEEEEEEEEEEECCCCCCC----CCEEEEEEEEE-CC--CEEEEEEECCCEEECCCCCCC--HH---HHHHHHHH
T ss_conf 529998537898446627848999----85368999980-78--619999958856657889881--34---46788877
Q ss_pred HHHHHCC--CEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHCCCCHH-CCCCC
Q ss_conf 2167619--43999985023321101232247999999999981889998899988652135303431056200-25789
Q gi|254781016|r 99 LFRQFSK--VYFLIETSNNIPTKAGLASSASGFAALTLALFRIYSIPEKSESLSRVARLGSGSACRSFYRGFCE-WICGT 175 (355)
Q Consensus 99 ~~r~~~~--~~~~I~S~N~fPtaaGLASSASgfAALa~Al~~~~~~~~~~~~lS~lARlGSGSA~RSi~GG~v~-W~~g~ 175 (355)
.+++..+ ..++|+.+.++|.++||+||||..+|+..|++++++++++.+++..+|+.+--...-+++||++. |+.|.
T Consensus 71 ~l~~~~~~~~~~~i~i~s~IP~g~GLGSSsA~~va~~~al~~~~~~~ls~~el~~ia~~~e~~v~~~~~~~~~~~~g~g~ 150 (158)
T 2v8p_A 71 EFERITGIEINYSIFIQKNIPPGAGLGGGSSNLAVVLKKVNELLGSPLSEEELRELVGSISADAPFFLLGKSAIGRGKGE 150 (158)
T ss_dssp HHHHHHCCCCCEEEEEECCSCTTSSSCHHHHHHHHHHHHHHHHTTCCSCHHHHHHHHHHHCTTTGGGGTCSEEEEETTTT
T ss_pred HHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCC
T ss_conf 65420232136788775075323555777403789999866412654233322011234566687523574133238743