HHsearch alignment of GI: 254781016 and MMDB domain: 3k17_A_211-350
>3k17_A (A:211-350) LIN0012 protein; protein structure initiative II(PSI II), NYSGXRC, structural genomics, NEW YORK SGX research center for structural genomics; HET: PGE; 2.10A {Listeria innocua}
Probab=95.87 E-value=0.16 Score=30.55 Aligned_cols=126 Identities=13% Similarity=-0.042 Sum_probs=78.0
Q ss_pred CCCEEEEEEECCCCCCCCCCHHHHHHHHH-----CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 64215899972876675210567988761-----8568999973055099999999809999999999999998999870
Q gi|254781016|r 192 PDLRIGLLKIIDREKKIGSREAMEITRHH-----SPFFTQWTQQISTDLAHIKQAIIDQDFIKLGEVAEKNALKMHATMI 266 (355)
Q Consensus 192 ~dl~~~i~iv~~~~K~vsSt~gm~~~v~t-----Sp~y~~r~~~~~~~~~~~~~ai~~~Df~~l~~i~e~dal~mHa~~~ 266 (355)
|+++ +++++++.+ .||..|...|.. ...+..-++...+-..++.+|+.++|++.|++++..+-..+-++..
T Consensus 1 p~~~--~~l~~tg~~--~~t~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~d~~~~g~l~~~~~~~l~~l~~ 76 (140)
T 3k17_A 1 PVPT--FSVGWTGTP--VSTGKLVSQIHAFKQEDSKNYQHFLTRNNEIXKQIIQAFHTKDEELLYSSIKENRRILQELGT 76 (140)
T ss_dssp CSSE--EEEEECSCC--CCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHH--HEEEECCCC--CCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 4433--168326986--445999999998634056999999999866689999877416999999999999999997543
Q ss_pred CCCCCEEEECHHHHHHHHHHHHHHHCCCEEEEEECCC--CEEEEEECHHH-HHHHHHHHHHCCC
Q ss_conf 3899568657889999999999742896199997779--81799955898-9999999763210
Q gi|254781016|r 267 AASPPLLYWQKETIQGMERVWDARQQSIPIYFTLDAG--PNLKLLFTHKI-EETIKQFFPEITI 327 (355)
Q Consensus 267 ~s~P~~~Y~~~~t~~ii~~v~~~R~~g~~v~fT~DAG--PNv~il~~~~~-~~~i~~~l~~i~~ 327 (355)
.+.+.+. +|.--+++ ...++.|..+-.| .|| =.|..||+.+. .+.|.+.+.+-+.
T Consensus 77 ~~~~~is--~~~l~~l~---~~a~~~g~gaki~-GAGgGG~v~al~~~~~~~~~i~~~~~~~g~ 134 (140)
T 3k17_A 77 KAGVNIE--TSLLKELA---DSAENXGGAGKSS-GSGGGDCGIAFSKTKELAEKLVNEWEKLGI 134 (140)
T ss_dssp HHTCCCS--CHHHHHHH---HHHHHTTSEEEEC-TTCSSSEEEEEESSHHHHHHHHHHHHHTTC
T ss_pred HCCCCCC--CHHHHHHH---HHHHHCCCEEEEE-CCCCCCEEEEEECCHHHHHHHHHHHHHCCC
T ss_conf 0387658--89999999---9998679389980-336401899998788999999999998799