HHsearch results for GI: 254781016 and protein with PDBid: 1uek_A
>1uek_A 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase; non-mevalonate pathway, GHMP superfamily; 1.70A {Thermus thermophilus} SCOP: d.14.1.5 d.58.26.5
Probab=98.89 E-value=6.5e-08 Score=74.19 Aligned_cols=249 Identities=15% Similarity=0.075 Sum_probs=133.8
Q ss_pred EECCCCEEEEECCCCCCHHHCCCCCCCEEEEECCCCEEEEEEECCCCCCEEEECCEECCCCCHHHHHHHHHHHHHHHHCC
Q ss_conf 97488424881167767011757898434681278107999971788857998787256652068999999742167619
Q gi|254781016|r 26 AFLPSNIALCKYWGKRDSKLNLPLNNSLSLSLGHLGTITHITVIDSDADCIILNGQKISSQSSFFKKTTQFCDLFRQFSK 105 (355)
Q Consensus 26 a~ap~NIALIKYWGK~d~~l~lP~n~SiS~TL~~~~T~T~v~~~~~~~d~~~lnG~~~~~~~~~~~ri~~~l~~~r~~~~ 105 (355)
|-|-.|..| +=-|||..-+ =--.|+=..+| ++-+-+++. .+ +.+.++|.. .++ .-|.+.++.+++..+
T Consensus 5 spAKINL~L-~i~~kr~dGy--H~i~s~~~~i~-l~D~i~i~~--~~-~~~~~~~p~--~~~---Nlv~ka~~~~~~~~~ 72 (275)
T 1uek_A 5 APAKVNLGL-SVRFRREDGY--HELHTLFAPFS-LADRLVVEP--VS-SGLHFQGPY--GRE---NLAYRAASLYLEAAG 72 (275)
T ss_dssp EEEEEEEEE-EEEEECTTSS--EEEEEEEEEEE-EEEEEEEEE--ES-SCEEEESTT--GGG---SHHHHHHHHHHHHTT
T ss_pred CCCEECCCE-EECCCCCCCC--CEEEEEEEEEC-CCEEEEEEE--CC-CCCEECCCC--CCC---HHHHHHHHHHHHHHC
T ss_conf 252073250-0078589997--52368999936-753999998--78-994786899--842---389999999888628
Q ss_pred C--EEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHCCCCHHCCCCCCCCCCCEE
Q ss_conf 4--39999850233211012322479999999999818899988999886521353034310562002578987654413
Q gi|254781016|r 106 V--YFLIETSNNIPTKAGLASSASGFAALTLALFRIYSIPEKSESLSRVARLGSGSACRSFYRGFCEWICGTDQNGMDSF 183 (355)
Q Consensus 106 ~--~~~I~S~N~fPtaaGLASSASgfAALa~Al~~~~~~~~~~~~lS~lARlGSGSA~RSi~GG~v~W~~g~~~~~sds~ 183 (355)
. .++|.-++++|.++||+||||..||...++++.++..++..+ +|+.. ||-+..+++|...|..|.++. ..
T Consensus 73 ~~~~~~I~i~K~IP~gaGLGggSs~aaa~l~~~~~~~~~~~~l~~---~a~~l-GsDvp~fl~g~~a~~~g~Ge~---l~ 145 (275)
T 1uek_A 73 QPGGVRILLEKRIPEGAGLGGGSSDAAQVLLALQALYPAEVDLFA---LARTL-GADVPFFLLGRGAEARGVGER---LK 145 (275)
T ss_dssp CCCEEEEEEECCSCSSSSSCHHHHHHHHHHHHHHHHSCSCCCHHH---HHHHH-CTTHHHHHHCSEEEEETTTTE---EE
T ss_pred CCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHH---HHHHH-CCCCCCCCCCCCCEECCCCCE---EE
T ss_conf 977769999858997676773579999999998764354047999---99972-877653116866311256420---26
Q ss_pred EEECCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
Q ss_conf 10156668642158999728766752105679887618568999973055099999999809999999999999998999
Q gi|254781016|r 184 AVPFNNQWPDLRIGLLKIIDREKKIGSREAMEITRHHSPFFTQWTQQISTDLAHIKQAIIDQDFIKLGEVAEKNALKMHA 263 (355)
Q Consensus 184 a~~~~~~~~dl~~~i~iv~~~~K~vsSt~gm~~~v~tSp~y~~r~~~~~~~~~~~~~ai~~~Df~~l~~i~e~dal~mHa 263 (355)
.+. .+++.+++++. + -..||.-+-+.+.-..+ .....+..+.+++..+|...+..--|.-+.+
T Consensus 146 ~~~----~~~~~~vlv~P--~--~~iST~~ay~~~~~~~~------~~~~~~~~~~~~l~~~~~~~~~NdLe~~~~~--- 208 (275)
T 1uek_A 146 PLA----LPPVPAVVFFP--G--LRVPTPLVYRAVRPEDF------GPDLPVEAILEALARGEEPPYWNSLEGPAFR--- 208 (275)
T ss_dssp EEC----CCCEEEEEEEC--C--CCCCHHHHHHTCCGGGC------CCCCCHHHHHHHHHHTCCCSCCBTTHHHHHH---
T ss_pred EEC----CCCCCEEEECC--C--CCCCHHHHHHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHH---
T ss_conf 711----46542255147--7--67776999987424315------8512478899987642056654554679988---
Q ss_pred HHHCCCCCEEEECHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEEC-HHHHHHHHHHHHH
Q ss_conf 870389956865788999999999974289619999777981799955-8989999999763
Q gi|254781016|r 264 TMIAASPPLLYWQKETIQGMERVWDARQQSIPIYFTLDAGPNLKLLFT-HKIEETIKQFFPE 324 (355)
Q Consensus 264 ~~~~s~P~~~Y~~~~t~~ii~~v~~~R~~g~~v~fT~DAGPNv~il~~-~~~~~~i~~~l~~ 324 (355)
+.|+-.++.+.+ ++.|-..+.=-.+||.|+.||. +++++++.+.++.
T Consensus 209 -----------l~P~i~~i~~~l---~~~ga~~~~lSGSGst~fal~~~~~~a~~~~~~l~~ 256 (275)
T 1uek_A 209 -----------LFPELKEVRGRM---RALGLRGVLMSGSGSAFFGLAEGPDHARRAAEALRA 256 (275)
T ss_dssp -----------HCTHHHHHHHHH---HHTTCEEEEECTTSSCEEEECSSHHHHHHHHHHHTT
T ss_pred -----------HCHHHHHHHHHH---HHCCCCEEEEECHHHCEEEEECCHHHHHHHHHHHHH
T ss_conf -----------685999999999---967998699988412468998999999999999877