HHsearch results for GI: 254781016 and protein with PDBid: 2hk2_A
>2hk2_A Diphosphomevalonate decarboxylase; mevalonate diphosphate decarboxylase, lyase; 2.30A {Staphylococcus aureus} PDB: 2hk3_A
Probab=100.00 E-value=0 Score=595.97 Aligned_cols=303 Identities=40% Similarity=0.618 Sum_probs=286.0
Q ss_pred CCCCEEEECCCCEEEEECCCCCCHHHCCCCCCCEEEEECCCCEEEEEEECCC-CCCEEEECCEECCCCCHHHHHHHHHHH
Q ss_conf 7763789748842488116776701175789843468127810799997178-885799878725665206899999974
Q gi|254781016|r 20 INEKSSAFLPSNIALCKYWGKRDSKLNLPLNNSLSLSLGHLGTITHITVIDS-DADCIILNGQKISSQSSFFKKTTQFCD 98 (355)
Q Consensus 20 ~~~~~ta~ap~NIALIKYWGK~d~~l~lP~n~SiS~TL~~~~T~T~v~~~~~-~~d~~~lnG~~~~~~~~~~~ri~~~l~ 98 (355)
...++||+||+||||||||||||+++|||.|||||+|||+|+|+|+|++++. ++|+|++||++.+.. ..+||.++++
T Consensus 5 ~~~~~~a~a~~nialiKYwGk~d~~~~~P~n~SiS~tl~~~~t~t~v~~~~~~~~d~~~~ng~~~~~~--~~~~i~~~~~ 82 (331)
T 2hk2_A 5 MIKSGKARAHTNIALIKYWGKKDEALIIPMNNSISVTLEKFYTETKVTFNDQLTQDQFWLNGEKVSGK--ELEKISKYMD 82 (331)
T ss_dssp HCEEEEEEEEEEEEEECCCCEEETTTTEESSCEEEEEEEEEEEEEEEEEETTCCSCEEEETTEEECTH--HHHHHHHHHH
T ss_pred CCCCEEEECCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCEEEEECCEECCCH--HHHHHHHHHH
T ss_conf 15523998765068885227567777788998776897788017999980698851899999538826--8899999999
Q ss_pred HHHHHCCC--EEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHCCCCHHCCCCCC
Q ss_conf 21676194--3999985023321101232247999999999981889998899988652135303431056200257898
Q gi|254781016|r 99 LFRQFSKV--YFLIETSNNIPTKAGLASSASGFAALTLALFRIYSIPEKSESLSRVARLGSGSACRSFYRGFCEWICGTD 176 (355)
Q Consensus 99 ~~r~~~~~--~~~I~S~N~fPtaaGLASSASgfAALa~Al~~~~~~~~~~~~lS~lARlGSGSA~RSi~GG~v~W~~g~~ 176 (355)
.+|+..+. +++|+++|+||+++|||||||++||++.|++++++++++.++++.+||+||||+|||+|||||+|..|..
T Consensus 83 ~~r~~~~~~~~~~I~s~n~iP~~~GLgSSAa~~aA~~~a~~~~~~~~l~~~el~~lA~~gsGs~~~si~GG~v~~~~~~~ 162 (331)
T 2hk2_A 83 IVRNRAGIDWYAEIESDNFVPTAAGLASSASAYAALAAACNQALDMQLSDKDLSRLARIGSGSASRSIYGGFAEWEKGYS 162 (331)
T ss_dssp HHHHHHTCCCEEEEEEEEESCGGGTCCCHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHTTCGGGGGGGSSSEEEEECCSS
T ss_pred HHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEECCEEEEECCCC
T ss_conf 99986199874799997368753332578999999999998762057998999999764287621011687667744788
Q ss_pred CCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
Q ss_conf 76544131015666864215899972876675210567988761856899997305509999999980999999999999
Q gi|254781016|r 177 QNGMDSFAVPFNNQWPDLRIGLLKIIDREKKIGSREAMEITRHHSPFFTQWTQQISTDLAHIKQAIIDQDFIKLGEVAEK 256 (355)
Q Consensus 177 ~~~sds~a~~~~~~~~dl~~~i~iv~~~~K~vsSt~gm~~~v~tSp~y~~r~~~~~~~~~~~~~ai~~~Df~~l~~i~e~ 256 (355)
++...++++....+|+++.+++++++.+.|+++||++|+.+++|+|||+.|++.++.++.+++.+++++||+.|++++|+
T Consensus 163 ~~~~~~~~l~~~~~~~~~~~vi~~~~~~~k~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~D~~~l~~~~e~ 242 (331)
T 2hk2_A 163 DETSYAVPLESNHFEDDLAMIFVVINQHSKKVPSRYGMSLTRNTSRFYQYWLDHIDEDLAEAKAAIQDKDFKRLGEVIEE 242 (331)
T ss_dssp TTTCEEEECCCTTGGGGEEEEEECCCCSSCCCCHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CCCCEEEEEECCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_conf 76633555404667875238999378545532455420001146608999998756779999999876999999999987
Q ss_pred HHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEECHHHHHHHHHHHHH
Q ss_conf 99989998703899568657889999999999742896199997779817999558989999999763
Q gi|254781016|r 257 NALKMHATMIAASPPLLYWQKETIQGMERVWDARQQSIPIYFTLDAGPNLKLLFTHKIEETIKQFFPE 324 (355)
Q Consensus 257 dal~mHa~~~~s~P~~~Y~~~~t~~ii~~v~~~R~~g~~v~fT~DAGPNv~il~~~~~~~~i~~~l~~ 324 (355)
|+++||++|+++.||++||+++|.++++.++++|+.|.++|||+||||||++||++++.++|.+.+.+
T Consensus 243 d~~~~h~~~~~~~~~~~~~~~~t~~i~~~i~~~r~~G~~~~~~sgAGPtv~~l~~~~~~~~v~~~l~~ 310 (331)
T 2hk2_A 243 NGLRMHATNLGSTPPFTYLVQESYDVMALVHECREAGYPCYFTMDAGPNVKILVEKKNKQQIIDKLLT 310 (331)
T ss_dssp HHHHHHHHHTTSSSCCCSCCHHHHHHHHHHHHHHHTTCCEEEECCSSSCEEEEEEHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHCCCCEEEEECCCHHEEEEECHHHHHHHHHHHHH
T ss_conf 68877998753478611004205999999999985898499995676344999878689999999996