HHsearch results for GI: 254781016 and protein with PDBid: 2hke_A
>2hke_A Diphosphomevalonate decarboxylase, putative; mevalonate diphosphate decarboxylase, lyase; 1.80A {Trypanosoma brucei}
Probab=100.00 E-value=0 Score=747.18 Aligned_cols=305 Identities=28% Similarity=0.452 Sum_probs=280.8
Q ss_pred CCEEEECCCCEEEEECCCCCC--HHHCCCCCCCEEEEECC--CCEEEEEEECCC-CCCEEEECCEECCCCCHHHHHHHHH
Q ss_conf 637897488424881167767--01175789843468127--810799997178-8857998787256652068999999
Q gi|254781016|r 22 EKSSAFLPSNIALCKYWGKRD--SKLNLPLNNSLSLSLGH--LGTITHITVIDS-DADCIILNGQKISSQSSFFKKTTQF 96 (355)
Q Consensus 22 ~~~ta~ap~NIALIKYWGK~d--~~l~lP~n~SiS~TL~~--~~T~T~v~~~~~-~~d~~~lnG~~~~~~~~~~~ri~~~ 96 (355)
...||+||+|||||||||||| +.+|||+|||||+||+. ++|+|+|+++++ +.|++||||++.+..+ .+|+.++
T Consensus 4 ~~vt~~AP~NIAlIKYWGKrD~~e~L~lP~N~SiS~TL~~~~~~T~Ttv~~~~~~~~D~~~lNG~~~~~~~--~~ri~~~ 81 (380)
T 2hke_A 4 QCVTVEAPINIAFIKYWGKREGGETLILPTNDSFSITLSASPFRSKTSVELRDDIETDTLRLNGTEVDVGK--TPRVQSM 81 (380)
T ss_dssp CEEEEEECCEEEEECCCCBCTTCTTTTCBSSCEEEEEBCSSSCCEEEEEEEESSCSSCEEEETTEEECGGG--CHHHHHH
T ss_pred CEEEEEEECEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCEEEECCEECCCCC--CHHHHHH
T ss_conf 61999820513465326777888677789998057995599976899999888887757999997787420--1689999
Q ss_pred HHHHHHHCC-----CEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHCCCCHHC
Q ss_conf 742167619-----439999850233211012322479999999999818899988999886521353034310562002
Q gi|254781016|r 97 CDLFRQFSK-----VYFLIETSNNIPTKAGLASSASGFAALTLALFRIYSIPEKSESLSRVARLGSGSACRSFYRGFCEW 171 (355)
Q Consensus 97 l~~~r~~~~-----~~~~I~S~N~fPtaaGLASSASgfAALa~Al~~~~~~~~~~~~lS~lARlGSGSA~RSi~GG~v~W 171 (355)
++.+|...+ .+++|+|+|||||||||||||||||||++|+.++|+.+ .++|+|||+||||||||+|||||+|
T Consensus 82 l~~ir~~~~~~~~~~~~~I~S~NnFPtaAGLASSAsg~AALa~al~~~~~~~---~~lS~lAR~GSGSAcRSi~GGfv~W 158 (380)
T 2hke_A 82 LLHLRSTCPEELKNKKVNIVSENNFPTAAGMASSASGYCAMSAALIRAFKST---TNVSMLARLGSGSACRSAFGGFVIW 158 (380)
T ss_dssp HHHHHTSSCHHHHTCEEEEEEEECSCTTSCCCHHHHHHHHHHHHHHHHHTCS---SCHHHHHHHHCGGGGGGGSSSEEEE
T ss_pred HHHHHHHCHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCC---HHHHHHHHHHCCCCHHHHCCCEEEE
T ss_conf 9999985614304751699975788205657877899999999999874254---4578998752765013303884572
Q ss_pred CCCCCCCCCCEEEEEC--CCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHCHHHHHHHHH-HHHHHHHHHHHHHHCCHH
Q ss_conf 5789876544131015--6668642158999728766752105679887618568999973-055099999999809999
Q gi|254781016|r 172 ICGTDQNGMDSFAVPF--NNQWPDLRIGLLKIIDREKKIGSREAMEITRHHSPFFTQWTQQ-ISTDLAHIKQAIIDQDFI 248 (355)
Q Consensus 172 ~~g~~~~~sds~a~~~--~~~~~dl~~~i~iv~~~~K~vsSt~gm~~~v~tSp~y~~r~~~-~~~~~~~~~~ai~~~Df~ 248 (355)
++|..+|++|+||+++ +.|||||+++|++|++++|+|+||+|||++|+|||||+.|..+ +++++++|++||+++||+
T Consensus 159 ~~g~~~dgsds~A~qi~~~~~w~~l~~~ilvvs~~~K~vsSt~GM~~~v~TSpl~~~r~~~~~~~~~~~~~~Ai~~~Df~ 238 (380)
T 2hke_A 159 NKGEKPDGSDCVATQFVDETHWPEIQVMCAVLKGAQKDVSSTKGMQQSLKTSPLMKKRISETVPERMKIASRAIKARDFA 238 (380)
T ss_dssp ECCSCTTSTTCEEEEEECTTSCTTEEEEEEECCCCSCCCCHHHHHHHHHHHCTTHHHHHHTHHHHHHHHHHHHHHHTCHH
T ss_pred CCCCCCCCCCCCEEECCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHH
T ss_conf 26899996000035236644551120699994377677775288999988391089999986377899999999839999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHH--CCCEEEEEECCCCEEEEEECHHHHHHHHHHHHHCC
Q ss_conf 9999999999989998703899568657889999999999742--89619999777981799955898999999976321
Q gi|254781016|r 249 KLGEVAEKNALKMHATMIAASPPLLYWQKETIQGMERVWDARQ--QSIPIYFTLDAGPNLKLLFTHKIEETIKQFFPEIT 326 (355)
Q Consensus 249 ~l~~i~e~dal~mHa~~~~s~P~~~Y~~~~t~~ii~~v~~~R~--~g~~v~fT~DAGPNv~il~~~~~~~~i~~~l~~i~ 326 (355)
+|++++|+|+++|||+||+++|||+||+|+|+++|++|+++|+ +|+++||||||||||||||+++++++|.++|.+
T Consensus 239 ~~~ei~e~ds~~mHA~~l~s~Ppi~Yl~~~S~~ii~~V~~~r~~~~~~~v~yT~DAGPNv~ll~~~~~~~~v~~~l~~-- 316 (380)
T 2hke_A 239 TFAEIAMLESDDLQEICATTEPKITYATEDSYAMIRLVKAYNAKKGRTALAYTFDAGANCFLFVLKEDLPEAVAMLME-- 316 (380)
T ss_dssp HHHHHHHHHHHHHHHHHHTSSSCCCCCCHHHHHHHHHHHHHHHHHTSCCEEEECCSSSCEEEEEEGGGHHHHHHHHHH--
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEECCCCHHHHHHHHHH--
T ss_conf 999999999999999985379987997846999999999999746894199997889877999725129999999998--
Q ss_pred CCCCCCCC
Q ss_conf 00368887
Q gi|254781016|r 327 IIDPLDSP 334 (355)
Q Consensus 327 ~~~~~~~~ 334 (355)
.+|....
T Consensus 317 -~fp~~~~ 323 (380)
T 2hke_A 317 -HFPTPFE 323 (380)
T ss_dssp -HSCCCGG
T ss_pred -HCCCCHH
T ss_conf -7899615