HHsearch alignment for GI: 254781017 and conserved domain: COG0083
>COG0083 ThrB Homoserine kinase [Amino acid transport and metabolism].
Probab=99.95 E-value=1.6e-24 Score=174.34 Aligned_cols=276 Identities=19% Similarity=0.197 Sum_probs=196.3
Q ss_pred CCEEEEECCEEEEEECCCEEECCCEEEEEEECCEEEEEEEECCCCEEEEEECCCCCCCCCCHHHCCCHHHHHHHHHHHHC
Q ss_conf 87899971704999743533089428987767728999998689849999536444465661201508999999999718
Q gi|254781017|r 5 LHKICVSAPGSLVLMGEHGVLHGHAALVFAINKRVILYLTLRKDRLINIDSSLGQYCGSLDLAMFHPSFSFIIMAINHIK 84 (324)
Q Consensus 5 ~~ki~~~aPGKv~L~GEh~v~~G~~ai~~aI~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~ 84 (324)
T Consensus 1 ~~~~~v~aPASSANlGp-----GFD~lGlAl~~~~~~~v~~~~~-~~~i~~~g-~~~~~iP~~~~n~~~~~~~~~~~~~~ 73 (299)
T COG0083 1 MLMMKVRVPASSANLGP-----GFDVLGLALDLYNDVVVVEVVD-KFEIEVEG-EGADKIPLDPENLVYQAALKFLEALG 73 (299)
T ss_pred CCEEEEEEEECCCCCCC-----CCCCEEEECCCCCCEEEEEECC-CEEEEEEC-CCCCCCCCCCCEEHHHHHHHHHHHHC
T ss_conf 94089997621024677-----7000012014557279997047-37999834-65667999830009999999999829
Q ss_pred CCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHH-HHCCCEEEEE
Q ss_conf 778738999826875354887402456655677764045666601455788887765214688754477-6629858998
Q gi|254781017|r 85 PSCGFDLKVISQLDSQLGLGSSAAITVAITAALLTLQYHKEPSPDEILTTAHAIVLKVQGISSGIDLAA-SIHGGLICYQ 163 (324)
Q Consensus 85 ~~~g~~i~i~s~iP~g~GLGSSaa~~va~~~al~~~~~~~~~~~~~i~~lA~~~E~~~~g~~sG~D~~a-~~~Gg~i~~~ 163 (324)
T Consensus 74 ~~~~~~i~i~k~IP~~rGLGSSaAsiVAal~aan~l~-~~~L~~~~ll~~a~~~Eg----Hp---DNVapa~lGG~~l~~ 145 (299)
T COG0083 74 IEAGVKIRIEKGIPLGRGLGSSAASIVAALAAANELA-GLPLSKEELLQLALEIEG----HP---DNVAPAVLGGLVLVE 145 (299)
T ss_pred CCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH-CCCCCHHHHHHHHHHHCC----CC---CHHHHHHHCCEEEEE
T ss_conf 9865799997699877787589999999999999984-599989999999997558----97---107777607879986
Q ss_pred E-CCCEEEEEE--CCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHH
Q ss_conf 5-275156730--4777526765841798999988899886082348999999984033207889873048644568999
Q gi|254781017|r 164 M-PKYSIEKID--FIFPIHLIYSGYKTPTAQVLKKISYIEIEYPEINEINQKIYALMGKLSQISCQALRNKNLKVLAQAM 240 (324)
Q Consensus 164 ~-~~~~~~~~~--~~~~l~l~~tg~~~~T~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~al~~~d~~~l~~lm 240 (324)
T Consensus 146 ~~~~~~~~~v~~~~~~~~v~~iP~~e~sT~~aR~vL---P~~~~-~~daV~n~-----s~~a~lv~al~~~~~~l~~~~~ 216 (299)
T COG0083 146 EESGIISVKVPFPSDLKLVVVIPNFEVSTAEARKVL---PKSYS-RKDAVFNL-----SRAALLVAALLEGDPELLRAMM 216 (299)
T ss_pred ECCCCEEEECCCCCCEEEEEEECCCCCCHHHHHHHC---CCCCC-HHHHHHHH-----HHHHHHHHHHHCCCHHHHHHHH
T ss_conf 158734797158764689999089656579999746---56688-89999999-----9999999999769999999870
Q ss_pred HH-HHHHHH-HHCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEE
Q ss_conf 99-899998-616787799999999997199459972689975489998466532689999999999779789
Q gi|254781017|r 241 NR-QQGLLE-TLGVSDSKLSEIVWKLREQPHIMASKISGSGLGDCVIALGKGDLNSLPYQSVNCHMHAKGIDI 311 (324)
Q Consensus 241 ~~-~~~~L~-~lgvs~~~l~~li~~~~~~~g~~~aklsGAG~GG~~i~l~~~~~~~~~~~~~~~~~~~~g~~~ 311 (324)
T Consensus 217 ~D~ihepyR~~L---~P~~~~v~-~~a~~~gA~g~~lSGAGP--Ti~al~~~~-~~e~~~~~~~~~~~~~~~~ 282 (299)
T COG0083 217 KDVIHEPYRAKL---VPGYAEVR-EAALEAGALGATLSGAGP--TVFALADES-DAEKAAALLEELYEQGIKG 282 (299)
T ss_pred CCCCCHHHHHHH---CCCHHHHH-HHHHHCCCEEEEEECCCC--EEEEEECCC-HHHHHHHHHHHHHHHCCCC
T ss_conf 360104666532---70189999-998647965999964787--079984542-0667999999999728850