HHsearch alignment for GI: 254781017 and conserved domain: COG1907
>COG1907 Predicted archaeal sugar kinases [General function prediction only].
Probab=99.49 E-value=8.7e-11 Score=87.42 Aligned_cols=271 Identities=20% Similarity=0.222 Sum_probs=175.1
Q ss_pred EEEECCEEEEEE-----CCCEEECCCEEEEEEECC-EEEEEEEECCCCEEEEEECCCCCCCCCCHHHCCCHHHHHHHHHH
Q ss_conf 999717049997-----435330894289877677-28999998689849999536444465661201508999999999
Q gi|254781017|r 8 ICVSAPGSLVLM-----GEHGVLHGHAALVFAINK-RVILYLTLRKDRLINIDSSLGQYCGSLDLAMFHPSFSFIIMAIN 81 (324)
Q Consensus 8 i~~~aPGKv~L~-----GEh~v~~G~~ai~~aI~~-~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 81 (324)
T Consensus 2 v~v~tpSrlH~gliDl~G~~GRv~Gg--vG~aLe~P~l~i~~~~s~--~~~~~g----------e~~~----~~~~~~a~ 63 (312)
T COG1907 2 VRVRTPSRLHAGLIDLNGSIGRVDGG--VGLALEEPRLEIEAKPSD--DIEVDG----------EDRR----ERVEKAAR 63 (312)
T ss_pred EEEECCCEEEECCCCCCCCCCCEECC--EEEEEECCCEEEEEECCC--CCCCCC----------HHHH----HHHHHHHH
T ss_conf 58704750110044578753213044--048850781599972055--411255----------0668----99999999
Q ss_pred -HHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCEE
Q ss_conf -7187787389998268753548874024566556777640456666014557888877652146887544776629858
Q gi|254781017|r 82 -HIKPSCGFDLKVISQLDSQLGLGSSAAITVAITAALLTLQYHKEPSPDEILTTAHAIVLKVQGISSGIDLAASIHGGLI 160 (324)
Q Consensus 82 -~~~~~~g~~i~i~s~iP~g~GLGSSaa~~va~~~al~~~~~~~~~~~~~i~~lA~~~E~~~~g~~sG~D~~a~~~Gg~i 160 (324)
T Consensus 64 ~~le~~~gv~I~I~~~~P~HvGLGS~TQlaLa~a~ai~~i-~gl~~~~~elA~~vgR------G~tSgiGv~afe~GGFI 136 (312)
T COG1907 64 LVLEVGEGVKIEIRSDIPAHVGLGSTTQLALAVASAILEI-YGLELSIRELAFAVGR------GGTSGIGVYAFEYGGFI 136 (312)
T ss_pred HHHCCCCCEEEEEEECCCHHCCCCHHHHHHHHHHHHHHHH-HCCCCCHHHHHHHHCC------CCCCCEEEEEEEECCEE
T ss_conf 7514167529999752732207773779999999999998-6589998999999736------77564137998878899
Q ss_pred EE-----EEC--CC--EEEEEECC--CCCCEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHC
Q ss_conf 99-----852--75--15673047--775267658417989999888998860823489999999840332078898730
Q gi|254781017|r 161 CY-----QMP--KY--SIEKIDFI--FPIHLIYSGYKTPTAQVLKKISYIEIEYPEINEINQKIYALMGKLSQISCQALR 229 (324)
Q Consensus 161 ~~-----~~~--~~--~~~~~~~~--~~l~l~~tg~~~~T~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~al~ 229 (324)
T Consensus 137 VDGGh~~~f~ps~~sP~I~R~dfPedW~~VlaIP~~~rg~~~-~~E~~if~~~~p~p~~~~~~ls~~---vLm~mmPavv 212 (312)
T COG1907 137 VDGGHSFGFLPSSASPLIFRLDFPEDWRFVLAIPEVERGVSG-RREVDIFKKYCPVPLEEVGELSHR---VLMKMMPAVV 212 (312)
T ss_pred EECCCCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCCCCC-HHHHHHHHHCCCCCHHHHHHHHHH---HHHHHHHHHH
T ss_conf 878744676668999605532288865999994478843210-278889975689997999899999---9998758988
Q ss_pred CCCHHHHHHHHHHHHHHH----HH--HCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHH
Q ss_conf 486445689999989999----86--167877999999999971994599726899754899984665326899999999
Q gi|254781017|r 230 NKNLKVLAQAMNRQQGLL----ET--LGVSDSKLSEIVWKLREQPHIMASKISGSGLGDCVIALGKGDLNSLPYQSVNCH 303 (324)
Q Consensus 230 ~~d~~~l~~lm~~~~~~L----~~--lgvs~~~l~~li~~~~~~~g~~~aklsGAG~GG~~i~l~~~~~~~~~~~~~~~~ 303 (324)
T Consensus 213 E~Die~fg~~l~~iQ~l~g~~f~~~e~~~~~~~V~~iv~~m~~~--a~~agqSSwGP--tvY~i~d~~~~~~~~~~~~~~ 288 (312)
T COG1907 213 ERDIESFGEALNEIQELGGKWFKKVEGGLQREDVKEIVDEMVEA--AYGAGQSSWGP--TVYGIVDSREAGSVVRKLIDI 288 (312)
T ss_pred HHCHHHHHHHHHHHHHHHHHHHHHHHCEECCHHHHHHHHHHHHH--CCCCCCCCCCC--EEEEECCCCCCCHHHHHHHHH
T ss_conf 63799999999999988766465641310228999999999872--30443256688--789861653212479999999
Q ss_pred HHHCCCEE
Q ss_conf 99779789
Q gi|254781017|r 304 MHAKGIDI 311 (324)
Q Consensus 304 ~~~~g~~~ 311 (324)
T Consensus 289 ~~~~g~~g 296 (312)
T COG1907 289 LLEEGIGG 296 (312)
T ss_pred HHHCCCCE
T ss_conf 87438861