HHsearch alignment for GI: 254781017 and conserved domain: KOG2833
>KOG2833 consensus.
Probab=99.35 E-value=3.2e-09 Score=77.51 Aligned_cols=278 Identities=16% Similarity=0.236 Sum_probs=147.5
Q ss_pred CCCCCCEEEEECCEEEEEECC---C---EEECCCEEEEEEECC---E--EEEEEEECC-CCEEEEEECCCCCCCCCCHHH
Q ss_conf 998887899971704999743---5---330894289877677---2--899999868-984999953644446566120
Q gi|254781017|r 1 MGQCLHKICVSAPGSLVLMGE---H---GVLHGHAALVFAINK---R--VILYLTLRK-DRLINIDSSLGQYCGSLDLAM 68 (324)
Q Consensus 1 ~~~~~~ki~~~aPGKv~L~GE---h---~v~~G~~ai~~aI~~---~--~~~~~~~~~-~~~i~i~~~~~~~~~~~~~~~ 68 (324)
T Consensus 1 ~~k~~~~~t~taPvNIAvIKYWGKRD~~l~LP~N~SISvTL~~D~L~t~Tt~~~s~~fe~dr~wLNGk~~----~i~~~R 76 (395)
T KOG2833 1 MDKPVAEVTATAPVNIAVIKYWGKRDEELNLPTNDSISVTLSQDDLCTLTTAVVSPSFEEDRMWLNGKEV----PISNKR 76 (395)
T ss_pred CCCCEEEEEECCCCEEEEEEECCCCCHHHCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCEEEECCCCC----CCCCHH
T ss_conf 9974036763166236665412444132137777706888535531445788842664454178878221----366378
Q ss_pred CCCHHHHHHHHHHHHC------C---CCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
Q ss_conf 1508999999999718------7---787389998268753548874024566556777640456666014557888877
Q gi|254781017|r 69 FHPSFSFIIMAINHIK------P---SCGFDLKVISQLDSQLGLGSSAAITVAITAALLTLQYHKEPSPDEILTTAHAIV 139 (324)
Q Consensus 69 ~~~~~~~i~~~l~~~~------~---~~g~~i~i~s~iP~g~GLGSSaa~~va~~~al~~~~~~~~~~~~~i~~lA~~~E 139 (324)
T Consensus 77 ~q~cl~e~r~~~~d~~~~~~~~~~~~~~~lHI~S~nNFPtAAGLASSAAG~Aalv~alarl-y~l~~~~~els~iAR~-- 153 (395)
T KOG2833 77 YQRCLREIRRLARDREESEASLPSNGPLKLHIASVNNFPTAAGLASSAAGFAALVLALARL-YGLDDSPEELSRIARQ-- 153 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH-HCCCCCHHHHHHHHHC--
T ss_conf 9999999999865323311256767871178874378830320011024089999999998-5899998999999861--
Q ss_pred HHHCCCCCCHHHHHHHCCCEEEEEECCC-------EEEEEEC-CCC----CCEEECCCC---CCHHHHHHHHHHHHHHCC
Q ss_conf 6521468875447766298589985275-------1567304-777----526765841---798999988899886082
Q gi|254781017|r 140 LKVQGISSGIDLAASIHGGLICYQMPKY-------SIEKIDF-IFP----IHLIYSGYK---TPTAQVLKKISYIEIEYP 204 (324)
Q Consensus 140 ~~~~g~~sG~D~~a~~~Gg~i~~~~~~~-------~~~~~~~-~~~----l~l~~tg~~---~~T~~~v~~v~~~~~~~~ 204 (324)
T Consensus 154 ----GSGS---ACRSl~GG~V~W~mG~~~DGsDsvAvq~~p~~~W~el~ililVvs~~~K~t~ST~GM~~sveTS~L--- 223 (395)
T KOG2833 154 ----GSGS---ACRSLYGGFVAWEMGELDDGSDSVAVQIAPSSHWPELRILILVVSDAKKKTGSTEGMRRSVETSQL--- 223 (395)
T ss_pred ----CCCH---HHHHHCCCEEEEECCCCCCCCCEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHH---
T ss_conf ----4860---455430453677315645787503787035347873189999960553344661888988887699---
Q ss_pred CHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHH-HHHH---HH-HHHHH------CCCCHHHHHHHHHHHHCCCC-EE
Q ss_conf 34899999998403320788987304864456899-9998---99-99861------67877999999999971994-59
Q gi|254781017|r 205 EINEINQKIYALMGKLSQISCQALRNKNLKVLAQA-MNRQ---QG-LLETL------GVSDSKLSEIVWKLREQPHI-MA 272 (324)
Q Consensus 205 ~~~~~~~~~~~~~~~i~~~~~~al~~~d~~~l~~l-m~~~---~~-~L~~l------gvs~~~l~~li~~~~~~~g~-~~ 272 (324)
T Consensus 224 -~qhRi~~---vVP~Ri~~m~eaI~~rDF~~FA~lTm~DSNqFHAvclDT~PPI~YmNd~S~~iI~~vh~~N~~~G~t~v 299 (395)
T KOG2833 224 -LQHRIES---VVPQRIQQMREAIRERDFESFAKLTMKDSNQFHAVCLDTFPPIFYLNDTSWRIISLVHEFNASAGGTRV 299 (395)
T ss_pred -HHHHHHH---HHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHCCCCEEE
T ss_conf -9999986---647999999999986577887777761312456442315897478536407999999998751697168
Q ss_pred EECCCCCCCCEEEEEECCCCCHHHHHHHH
Q ss_conf 97268997548999846653268999999
Q gi|254781017|r 273 SKISGSGLGDCVIALGKGDLNSLPYQSVN 301 (324)
Q Consensus 273 aklsGAG~GG~~i~l~~~~~~~~~~~~~~ 301 (324)
T Consensus 300 AYTFDAGPNAvl~~l~e~--~~~~l~~~~ 326 (395)
T KOG2833 300 AYTFDAGPNAVLIVLEEN--VSQLLAAVL 326 (395)
T ss_pred EEEECCCCCEEEEEHHHH--HHHHHHHHH
T ss_conf 988338986289983640--999999999