HHsearch alignment for GI: 254781017 and conserved domain: KOG4644
>KOG4644 consensus.
Probab=99.82 E-value=3.2e-17 Score=128.14 Aligned_cols=294 Identities=18% Similarity=0.237 Sum_probs=176.4
Q ss_pred CCCCCEEEEECCEEEEEECCCEEE-------CCCEEEEEEECCE----EEE------------EEEECCCCE-EEEEEC-
Q ss_conf 988878999717049997435330-------8942898776772----899------------999868984-999953-
Q gi|254781017|r 2 GQCLHKICVSAPGSLVLMGEHGVL-------HGHAALVFAINKR----VIL------------YLTLRKDRL-INIDSS- 56 (324)
Q Consensus 2 ~~~~~ki~~~aPGKv~L~GEh~v~-------~G~~ai~~aI~~~----~~~------------~~~~~~~~~-i~i~~~- 56 (324)
T Consensus 566 g~g~s~Viae~PaRiDF~GGW~DTPPiafel~n~AVlglAiklDGk~PIga~a~kI~ePelwlai~~rQDel~V~I~crc 645 (948)
T KOG4644 566 GAGPSTVIAEAPARIDFFGGWLDTPPIAFELDNAAVLGLAIKLDGKNPIGAFAEKIDEPELWLAIEIRQDELFVHIKCRC 645 (948)
T ss_pred CCCCCEEEEECCEEEEECCCCCCCCCEEEECCCCCEEEEEEEECCCCCCCHHHHCCCCCHHEEEEEEECCCEEEEEEEEH
T ss_conf 99986389956556652266567997057616531134688734889621466518971020113564264189998500
Q ss_pred ---CCCCCCCCCHHHC-CC-H----------HHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf ---6444465661201-50-8----------9999999997187787389998268753548874024566556777640
Q gi|254781017|r 57 ---LGQYCGSLDLAMF-HP-S----------FSFIIMAINHIKPSCGFDLKVISQLDSQLGLGSSAAITVAITAALLTLQ 121 (324)
Q Consensus 57 ---~~~~~~~~~~~~~-~~-~----------~~~i~~~l~~~~~~~g~~i~i~s~iP~g~GLGSSaa~~va~~~al~~~~ 121 (324)
T Consensus 646 laDlrD~cqpHa~gal~~aafiCA~IVhl~sel~i~d~~~k~-f~~GfeihT~SdLPHGSGLGTSSIlA~TaLaAi~~aa 724 (948)
T KOG4644 646 LADLRDLCQPHAKGALEAAAFICACIVHLGSELNILDIFEKL-FCCGFEIHTSSDLPHGSGLGTSSILACTALAAICAAA 724 (948)
T ss_pred HHHHHHHHCCCCCCHHHHHHHHHEEEEECCCHHHHHHHHHHH-HCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 101577625578760555424411333203143399999997-3475473032458887776568889899999999860
Q ss_pred CCCCCCCHH----HHHHHHHHHHHHCCCCCC-HHHHHHHCCCEEE---EEECCCEEEEEE----------CCCCCCEEEC
Q ss_conf 456666014----557888877652146887-5447766298589---985275156730----------4777526765
Q gi|254781017|r 122 YHKEPSPDE----ILTTAHAIVLKVQGISSG-IDLAASIHGGLIC---YQMPKYSIEKID----------FIFPIHLIYS 183 (324)
Q Consensus 122 ~~~~~~~~~----i~~lA~~~E~~~~g~~sG-~D~~a~~~Gg~i~---~~~~~~~~~~~~----------~~~~l~l~~t 183 (324)
T Consensus 725 -gr~~gTeaLiHailHtvlrlEQil-TTGGGWQDQ~G~im~GIK~gr~rael~~~ie~eeiTipe~f~ekL~dhLLLVYT 802 (948)
T KOG4644 725 -GRADGTEALIHAILHTVLRLEQIL-TTGGGWQDQCGAIMEGIKKGRCRAELNHGIEHEEITIPEEFREKLEDHLLLVYT 802 (948)
T ss_pred -CCCCCHHHHHHHHHHHHHHHHHHH-HCCCCHHHHCCCHHHHHHHCCCHHHCCCCCEEEEECCCHHHHHHHHHCEEEEEE
T ss_conf -544563676899999999999886-237853653051221012032021256774352101778999997620799872
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHH--CCCCHHHHHHH
Q ss_conf 8417989999888998860823489999999840332078898730486445689999989999861--67877999999
Q gi|254781017|r 184 GYKTPTAQVLKKISYIEIEYPEINEINQKIYALMGKLSQISCQALRNKNLKVLAQAMNRQQGLLETL--GVSDSKLSEIV 261 (324)
Q Consensus 184 g~~~~T~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~al~~~d~~~l~~lm~~~~~~L~~l--gvs~~~l~~li 261 (324)
T Consensus 803 GKTRLAkNLLQdViR--n~far~~a~~Q~ah~-l~~~tdecAegf~kGsl~LlgecL~~YweqKk~MapgCEPl~Vr~ll 879 (948)
T KOG4644 803 GKTRLAKNLLQDVIR--NFFARCKATKQKAHK-LAEATDECAEGFEKGSLELLGECLEHYWEQKKFMAPGCEPLNVRELL 879 (948)
T ss_pred CCHHHHHHHHHHHHH--HHHHHHHHHHHHHHH-HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
T ss_conf 721889999999999--999766899999999-99999999998862758789999999987651047899997489999
Q ss_pred HHHHHCCCCEEEECCCCCCCCEEEEEECCCCCHHHHHHHH
Q ss_conf 9999719945997268997548999846653268999999
Q gi|254781017|r 262 WKLREQPHIMASKISGSGLGDCVIALGKGDLNSLPYQSVN 301 (324)
Q Consensus 262 ~~~~~~~g~~~aklsGAG~GG~~i~l~~~~~~~~~~~~~~ 301 (324)
T Consensus 880 dmLaph~hgesgw~AGAGGGGFiYLl~kEpqqkeaiEa~L 919 (948)
T KOG4644 880 DMLAPHKHGESGWAAGAGGGGFIYLLIKEPQQKEAIEAFL 919 (948)
T ss_pred HHHCCCCCCCCCHHCCCCCCCEEEEEECCCCCHHHHHHHH
T ss_conf 8746001132120015788737999965889978999860