HHsearch alignment for GI: 254781017 and conserved domain: PRK01726
>PRK01726 consensus.
Probab=99.89 E-value=1e-20 Score=150.21 Aligned_cols=256 Identities=15% Similarity=0.143 Sum_probs=172.2
Q ss_pred CEEEEECCEEEEEE---------CCCEEECCCEEEEEEECCEEEEEEEECCCCEEEEEECCCCCCCCCCHHHCCCHHHHH
Q ss_conf 78999717049997---------435330894289877677289999986898499995364444656612015089999
Q gi|254781017|r 6 HKICVSAPGSLVLM---------GEHGVLHGHAALVFAINKRVILYLTLRKDRLINIDSSLGQYCGSLDLAMFHPSFSFI 76 (324)
Q Consensus 6 ~ki~~~aPGKv~L~---------GEh~v~~G~~ai~~aI~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~i 76 (324)
T Consensus 20 k~~~~~aPAKINL~L~V~gkR~DGYH~L----~Sl~~~idl~D~i~i~~~~~~~i~~~~~~~~i~-----~~~Nli~kA~ 90 (312)
T PRK01726 20 KPLRFPSPAKLNLFLYINGKRPDGYHEL----QTLFQFLDFGDWLDISIREDNQIVLTPEIPNLK-----TEDNLIYRAA 90 (312)
T ss_pred CEEEEECCEEECCCCCCCCCCCCCCCEE----EEEEEEECCCCEEEEEECCCCCEEEECCCCCCC-----CCCCHHHHHH
T ss_conf 7788746304804502078289998526----899999468969999996899789936789998-----8675999999
Q ss_pred HHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHC
Q ss_conf 99999718778738999826875354887402456655677764045666601455788887765214688754477662
Q gi|254781017|r 77 IMAINHIKPSCGFDLKVISQLDSQLGLGSSAAITVAITAALLTLQYHKEPSPDEILTTAHAIVLKVQGISSGIDLAASIH 156 (324)
Q Consensus 77 ~~~l~~~~~~~g~~i~i~s~iP~g~GLGSSaa~~va~~~al~~~~~~~~~~~~~i~~lA~~~E~~~~g~~sG~D~~a~~~ 156 (324)
T Consensus 91 ~~l~~~~~~~~~~~I~l~KnIPvgAGLGGGSSdAAavL~~Ln~l-~~l~ls~~~L~~ia~~i---------GADVPffl~ 160 (312)
T PRK01726 91 KLLQQKTNCQLGANIHLDKILPMGGGVGGGSSNAATALVALNYL-WQTNLSIDELAKLGLTL---------GADVPIFVH 160 (312)
T ss_pred HHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH-HCCCCCHHHHHHHHHHH---------CCCEEEEEE
T ss_conf 99999769987638999737866567775434699999999998-44699989999999861---------898166861
Q ss_pred CCEEEEEECCCEEEEEECCC-CCCEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCHHH
Q ss_conf 98589985275156730477-75267658417989999888998860823489999999840332078898730486445
Q gi|254781017|r 157 GGLICYQMPKYSIEKIDFIF-PIHLIYSGYKTPTAQVLKKISYIEIEYPEINEINQKIYALMGKLSQISCQALRNKNLKV 235 (324)
Q Consensus 157 Gg~i~~~~~~~~~~~~~~~~-~l~l~~tg~~~~T~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~al~~~d~~~ 235 (324)
T Consensus 161 ~~~a~~~GiGE~l~~i~~~~~~~lLv~P~i~vST~~vf~~~~l-~~~~~~-----~~~~~~l--------~~~~~NDLE~ 226 (312)
T PRK01726 161 GHAAFAEGVGEKITYCEPPEKWFVVLKPDDSISTAVIFQDPNL-PRNTPK-----KSLEQLL--------SEPYKNDCEK 226 (312)
T ss_pred CCCEEEECCCCEEEECCCCCCEEEEECCCCCCCCHHHHHCCCC-CCCCCH-----HHHHHHH--------HHHHCCCHHH
T ss_conf 7778998898682066777666999899998687799709675-547631-----1499998--------6061164489
Q ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEE
Q ss_conf 68999998999986167877999999999971994599726899754899984665326899999999997797899941
Q gi|254781017|r 236 LAQAMNRQQGLLETLGVSDSKLSEIVWKLREQPHIMASKISGSGLGDCVIALGKGDLNSLPYQSVNCHMHAKGIDIVPIT 315 (324)
Q Consensus 236 l~~lm~~~~~~L~~lgvs~~~l~~li~~~~~~~g~~~aklsGAG~GG~~i~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 315 (324)
T Consensus 227 ~a~----------~---~~PeI~~i~~~L~~~~-~--arMSGSGS--T~FglF~sk~eA~k---i~~~~p-~~~~~~~~k 284 (312)
T PRK01726 227 VVI----------N---HYSEVEEALNWLLQYA-P--ARLTGTGA--CVFAEFDHEASAQA---VFRQKP-EAFFGFVAK 284 (312)
T ss_pred HHH----------H---HCHHHHHHHHHHHHCC-C--CEEECCCC--EEEEEECCHHHHHH---HHHHCC-CCCEEEECC
T ss_conf 999----------8---6899999999986138-9--83675380--49999799999999---998689-764699836
Q ss_pred C
Q ss_conf 4
Q gi|254781017|r 316 P 316 (324)
Q Consensus 316 ~ 316 (324)
T Consensus 285 ~ 285 (312)
T PRK01726 285 G 285 (312)
T ss_pred C
T ss_conf 8