HHsearch alignment for GI: 254781017 and conserved domain: PRK04344
>PRK04344 consensus.
Probab=99.95 E-value=7.7e-26 Score=182.70 Aligned_cols=273 Identities=17% Similarity=0.154 Sum_probs=186.3
Q ss_pred CEEEEECCEEEEEE----CCCEE-ECCCEEEEEEECCEEEEEEEECCCCEEEEEECCCCCCCCCCHHHCCCHHHHHHHHH
Q ss_conf 78999717049997----43533-08942898776772899999868984999953644446566120150899999999
Q gi|254781017|r 6 HKICVSAPGSLVLM----GEHGV-LHGHAALVFAINKRVILYLTLRKDRLINIDSSLGQYCGSLDLAMFHPSFSFIIMAI 80 (324)
Q Consensus 6 ~ki~~~aPGKv~L~----GEh~v-~~G~~ai~~aI~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~i~~~l 80 (324)
T Consensus 1 M~i~~kapAKINL~L~V~~kr~dGyH~l~s~~~~i~l~D~i~i~~~~~~~i~i~~~~~~~p~----~~~Nlv~ka~~~l~ 76 (284)
T PRK04344 1 MKIYEKAPAKINLSLDTLFKRDDGYHEVEMIMTTIDLADRLTLEELKEDKIVVDSENRFVPS----DQRNLAYQAAKLLK 76 (284)
T ss_pred CCEEEEECEEEECCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEECCCCCEEEEECCCCCCC----CCCHHHHHHHHHHH
T ss_conf 90516712128533322775899982268999995688299999988998899978876888----76219999999999
Q ss_pred HHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCEE
Q ss_conf 97187787389998268753548874024566556777640456666014557888877652146887544776629858
Q gi|254781017|r 81 NHIKPSCGFDLKVISQLDSQLGLGSSAAITVAITAALLTLQYHKEPSPDEILTTAHAIVLKVQGISSGIDLAASIHGGLI 160 (324)
Q Consensus 81 ~~~~~~~g~~i~i~s~iP~g~GLGSSaa~~va~~~al~~~~~~~~~~~~~i~~lA~~~E~~~~g~~sG~D~~a~~~Gg~i 160 (324)
T Consensus 77 ~~~~~~~~~~I~l~KnIPvgaGLGGGSSdAAa~L~~Ln~l-~~l~ls~~~L~~la~~l---------GaDVPffl~g~~a 146 (284)
T PRK04344 77 ERYNIKKGVTISIDKHIPVAAGLAGGSSDAAATLRGLNRL-WNLGLSLEELAELGSEI---------GSDVPFCVYGGTA 146 (284)
T ss_pred HHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHH-HCCCCCHHHHHHHHHHC---------CCCEEEEEECCCE
T ss_conf 9759899769999978988678898615799999999998-56899999999999862---------7986489827618
Q ss_pred EEEECCCEEEEEECC--CCCCEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHH
Q ss_conf 998527515673047--775267658417989999888998860823489999999840332078898730486445689
Q gi|254781017|r 161 CYQMPKYSIEKIDFI--FPIHLIYSGYKTPTAQVLKKISYIEIEYPEINEINQKIYALMGKLSQISCQALRNKNLKVLAQ 238 (324)
Q Consensus 161 ~~~~~~~~~~~~~~~--~~l~l~~tg~~~~T~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~al~~~d~~~l~~ 238 (324)
T Consensus 147 ~~~G~Ge~l~~l~~~~~~~~vlv~P~~~vST~~vy~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~ 211 (284)
T PRK04344 147 LATGRGEKIEPLPTPPSCWVVLAKPNIGVSTPDIFKNLNLDRIEHPDT---------------DKMVEAIENGDYQQICQ 211 (284)
T ss_pred EEECCCCEEEECCCCCCCEEEEECCCCCCCHHHHHHHCCCCCCCCCCH---------------HHHHHHHHCCCHHHHHH
T ss_conf 998589650799877875899988999967399997458000468777---------------89999886279999997
Q ss_pred HHHHHHHHHHHHC-CCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEE
Q ss_conf 9999899998616-78779999999999719945997268997548999846653268999999999977978999
Q gi|254781017|r 239 AMNRQQGLLETLG-VSDSKLSEIVWKLREQPHIMASKISGSGLGDCVIALGKGDLNSLPYQSVNCHMHAKGIDIVP 313 (324)
Q Consensus 239 lm~~~~~~L~~lg-vs~~~l~~li~~~~~~~g~~~aklsGAG~GG~~i~l~~~~~~~~~~~~~~~~~~~~g~~~~~ 313 (324)
T Consensus 212 ~~---~Ndle~~~~~~~P~i~~i~~~l~~-~Ga~~~~mSGSGs--tvF~lf~~~~~A~~~~~~lk~~~~~~~~~~~ 281 (284)
T PRK04344 212 SL---GNVLEPVTLAKHPEIAKIKNRMLK-FGADAALMSGSGP--TVFGLCRKESRAQRIYNGLKGFCEEVYLVRL 281 (284)
T ss_pred HC---CCCHHHHHHHHCHHHHHHHHHHHH-CCCCEEEEECCCC--CEEEEECCHHHHHHHHHHHHHHCCCEEEEEE
T ss_conf 73---485689999859399999999996-7998689977251--2489989999999999987875792899997