HHsearch alignment for GI: 254781017 and conserved domain: PRK04648
>PRK04648 consensus.
Probab=99.85 E-value=4.6e-19 Score=139.82 Aligned_cols=257 Identities=13% Similarity=0.133 Sum_probs=163.9
Q ss_pred ECCEEEEEEC----CCEE-ECCCEEEEEEECCEEEEEEEECCCCEEEEEECCCCCCCCCCHHHCCCHHHHHHHHHHHHCC
Q ss_conf 7170499974----3533-0894289877677289999986898499995364444656612015089999999997187
Q gi|254781017|r 11 SAPGSLVLMG----EHGV-LHGHAALVFAINKRVILYLTLRKDRLINIDSSLGQYCGSLDLAMFHPSFSFIIMAINHIKP 85 (324)
Q Consensus 11 ~aPGKv~L~G----Eh~v-~~G~~ai~~aI~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~ 85 (324)
T Consensus 18 ~APAKINL~L~V~gkr~DGYH~l~Sl~~~idl~D~l~i~~~~~~~~~~~~~~~~~---i~-~~~Nlv~ka~~~l~~~~~~ 93 (295)
T PRK04648 18 PAPAKLNLFLQITGRRADGYHLLQTVFRLLDWGDTIHLRVRSDGQIHRIGESLPG---VA-EDDDLVVRAARLLQSAAGT 93 (295)
T ss_pred CCCCEEECCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEECCCCCEEEECCCCCC---CC-CCCHHHHHHHHHHHHHHCC
T ss_conf 5621370251328879999872568999837880999998899947993688888---99-9774999999999996599
Q ss_pred CCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCEEEEEEC
Q ss_conf 78738999826875354887402456655677764045666601455788887765214688754477662985899852
Q gi|254781017|r 86 SCGFDLKVISQLDSQLGLGSSAAITVAITAALLTLQYHKEPSPDEILTTAHAIVLKVQGISSGIDLAASIHGGLICYQMP 165 (324)
Q Consensus 86 ~~g~~i~i~s~iP~g~GLGSSaa~~va~~~al~~~~~~~~~~~~~i~~lA~~~E~~~~g~~sG~D~~a~~~Gg~i~~~~~ 165 (324)
T Consensus 94 ~~~~~I~l~K~IPvgAGLGGGSSnAAa~L~~Ln~~-~~l~ls~~~L~~ia~~l---------GaDVPffl~~~~a~~~G~ 163 (295)
T PRK04648 94 ALGAEIRVDKRIPAGGGFGGGSSDAATVLVALNAL-WGLGLDVDTLAELGLRL---------GADVPVFVRGHNAWAEGV 163 (295)
T ss_pred CCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH-HCCCCCHHHHHHHHHHH---------CCCCEEEEECCCEEEEEC
T ss_conf 98749999806866756776546899999999998-58999989999999964---------899315874776899967
Q ss_pred CCEEEEEECC-CCCCEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHH
Q ss_conf 7515673047-775267658417989999888998860823489999999840332078898730486445689999989
Q gi|254781017|r 166 KYSIEKIDFI-FPIHLIYSGYKTPTAQVLKKISYIEIEYPEINEINQKIYALMGKLSQISCQALRNKNLKVLAQAMNRQQ 244 (324)
Q Consensus 166 ~~~~~~~~~~-~~l~l~~tg~~~~T~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~al~~~d~~~l~~lm~~~~ 244 (324)
T Consensus 164 GE~l~~~~~~~~~~lLv~P~~~vST~~vy~~~~~~~~~~~~-------------~~~~~~~~~~~~NdlE~~~~------ 224 (295)
T PRK04648 164 GEQLTPISLPEAAYLLVDPGVHVPTPVLFRSQELTRDAAPA-------------KIADFASGSLLDNAFEPVLR------ 224 (295)
T ss_pred CCEEEECCCCCCEEEEECCCCCCCHHHHHHCCCCCCCCCCC-------------CHHHHHHCCHHHCHHHHHHH------
T ss_conf 83635867788579998899996659997383445666645-------------56777628431181689998------
Q ss_pred HHHHHHCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEC
Q ss_conf 999861678779999999999719945997268997548999846653268999999999977978999414
Q gi|254781017|r 245 GLLETLGVSDSKLSEIVWKLREQPHIMASKISGSGLGDCVIALGKGDLNSLPYQSVNCHMHAKGIDIVPITP 316 (324)
Q Consensus 245 ~~L~~lgvs~~~l~~li~~~~~~~g~~~aklsGAG~GG~~i~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 316 (324)
T Consensus 225 ----~---~~P~I~~i~~~L~~~-g--~a~MSGSGS--t~FglF~~~~~A~---~a~~~l~~-~~~~w~v~~ 280 (295)
T PRK04648 225 ----R---REPAVEAVFQALSRV-G--TPRLTGSGS--GCFVEFATRAAAE---QALAQLPG-GLRAWVVEG 280 (295)
T ss_pred ----H---CCHHHHHHHHHHHCC-C--CCCEEEECC--CEEEEECCHHHHH---HHHHHCCC-CCCEEEECC
T ss_conf ----6---288999999998605-9--865795352--1389989999999---99996345-288699745