HHsearch alignment for GI: 254781017 and conserved domain: TIGR00144
>TIGR00144 beta_RFAP_syn beta-ribofuranosylaminobenzene 5'-phosphate synthase family; InterPro: IPR004422 This protein family contains several archaeal examples of beta-ribofuranosylaminobenzene 5-prime-phosphate synthase (beta-RFAP synthase), an enzyme involved in methanopterin biosynthesis . In some species, two members of this family are found. It is unclear whether both act as beta-RFAP synthase. This family is related to the GHMP kinases (Galactokinase, Homoserine kinase, Mevalonate kinase, Phosphomevalonate kinase). Members are found so far only in the Archaea and in Methylobacterium extorquens.They have an amino-terminal domain probably related to ATP binding..
Probab=98.26 E-value=0.00042 Score=45.17 Aligned_cols=290 Identities=20% Similarity=0.230 Sum_probs=171.1
Q ss_pred EECCEEEEE-----ECCCEEECCCEEEEEEECC-EEEEEEEECCCCEEEEEECCCCC-CCCCCHHHCCCHHHHHHHHHHH
Q ss_conf 971704999-----7435330894289877677-28999998689849999536444-4656612015089999999997
Q gi|254781017|r 10 VSAPGSLVL-----MGEHGVLHGHAALVFAINK-RVILYLTLRKDRLINIDSSLGQY-CGSLDLAMFHPSFSFIIMAINH 82 (324)
Q Consensus 10 ~~aPGKv~L-----~GEh~v~~G~~ai~~aI~~-~~~~~~~~~~~~~i~i~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~ 82 (324)
T Consensus 3 ~~~p~~~~~~l~dl~g~~g~~dgg~--g~~l~~p~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (337)
T TIGR00144 3 LNTPSRLHLTLIDLNGSIGRVDGGV--GLALEEPELEIGGKESDDLGVEFDKKLVGKLGEPYNKSVRDRVYEAAAKTLDY 80 (337)
T ss_pred CCCCCCEEEEEEECCCCCCCCCCCC--CEEECCCCEEEECCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 3575410345552166422224552--10112653144023333333101135565411045677888889989999987
Q ss_pred HCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCEEEE
Q ss_conf 18778738999826875354887402456655677764045666601455788887765214688754477662985899
Q gi|254781017|r 83 IKPSCGFDLKVISQLDSQLGLGSSAAITVAITAALLTLQYHKEPSPDEILTTAHAIVLKVQGISSGIDLAASIHGGLICY 162 (324)
Q Consensus 83 ~~~~~g~~i~i~s~iP~g~GLGSSaa~~va~~~al~~~~~~~~~~~~~i~~lA~~~E~~~~g~~sG~D~~a~~~Gg~i~~ 162 (324)
T Consensus 81 ~g~d~~~~~~~~~~~~~~~glg~g~~~~l~~~~~~~~~-~~~~~~~~~~~~~~g~------gg~~g~g~~~~~~gg~~~d 153 (337)
T TIGR00144 81 IGGDEGFDLEVLSLFPAHSGLGSGTQLSLAVGRLVSEL-YGLELTARELAEIVGR------GGTSGIGVAAFEDGGFLVD 153 (337)
T ss_pred HCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHH-HCCCCHHHHHHHHHCC------CCCCCCCEEEECCCCEEEE
T ss_conf 26765511687530320014566512467788888887-3243104556665327------7754330122215752664
Q ss_pred EE----------------------CCCEEEEEEC--CCCCCEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
Q ss_conf 85----------------------2751567304--77752676584179899998889988608234899999998403
Q gi|254781017|r 163 QM----------------------PKYSIEKIDF--IFPIHLIYSGYKTPTAQVLKKISYIEIEYPEINEINQKIYALMG 218 (324)
Q Consensus 163 ~~----------------------~~~~~~~~~~--~~~l~l~~tg~~~~T~~~v~~v~~~~~~~~~~~~~~~~~~~~~~ 218 (324)
T Consensus 154 ~g~~~g~g~~~~~~~p~~~~~g~~p~p~~~~~d~p~~w~~~~~~p~~~~~~~-g~~~~~~~~~~cp~pl~~~~~~~~~-- 230 (337)
T TIGR00144 154 GGHSTGKGKEKEDFLPSSASKGAKPAPVIARLDFPEDWNVILAIPELDRGVF-GKREVNLFQKYCPVPLEDVEKLCHL-- 230 (337)
T ss_pred CCCCCCCCCCCHHCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEECCCCCCC-CCHHHHHHHHHCCCCHHHHHHHHHH--
T ss_conf 5654466643000255321256776531221257745415887313211124-4113344554258766788999999--
Q ss_pred CCCHHHHHHHCCCCHHHHHHHHHHHHHH-HHH--HCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEECCCCCHH
Q ss_conf 3207889873048644568999998999-986--1678779999999999719945997268997548999846653268
Q gi|254781017|r 219 KLSQISCQALRNKNLKVLAQAMNRQQGL-LET--LGVSDSKLSEIVWKLREQPHIMASKISGSGLGDCVIALGKGDLNSL 295 (324)
Q Consensus 219 ~i~~~~~~al~~~d~~~l~~lm~~~~~~-L~~--lgvs~~~l~~li~~~~~~~g~~~aklsGAG~GG~~i~l~~~~~~~~ 295 (324)
T Consensus 231 -~l~~~~p~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~g~~~~g~~~~gp--~~~~~~d~-~~~~ 305 (337)
T TIGR00144 231 -ILMKMLPAVVEGDLDDFGEALNKLQGLGFKKVELELQGPLIKGLIDLLD-KDGAPGAGLSSFGP--TVYAVTDE-KPGG 305 (337)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH-HCCCCCCCCCCCCC--EEEEECCC-CCHH
T ss_conf -9987655666301567778887776313023445553357888887654-14753134222475--24652254-4014
Q ss_pred HHHHHHHHHHHCCCEEEEEEC
Q ss_conf 999999999977978999414
Q gi|254781017|r 296 PYQSVNCHMHAKGIDIVPITP 316 (324)
Q Consensus 296 ~~~~~~~~~~~~g~~~~~~~~ 316 (324)
T Consensus 306 ~~~~~~~~~~~~g~~~~~~~~ 326 (337)
T TIGR00144 306 IAGALNDIFGPYGYYGRIIVT 326 (337)
T ss_pred HHHHHHHHHHCCCCCEEEEEE
T ss_conf 677788752003641137874