HHsearch results for GI: 254781017 and protein with PDBid: 1fi4_A

>1fi4_A Mevalonate 5-diphosphate decarboxylase; mixed alpha/beta structure, ATP binding, cholesterol biosynthesis, structural genomics, PSI; 2.27A {Saccharomyces cerevisiae} SCOP: d.14.1.5 d.58.26.2
Probab=99.70  E-value=1.3e-13  Score=103.84  Aligned_cols=281  Identities=14%  Similarity=0.142  Sum_probs=158.7

Q ss_pred             CCCCC--EEEEECCEEEEEECCCE--E----ECCCEEEEEEEC---CEEEEEEEECCCCE---EEEEECCCCCCCCCCHH
Q ss_conf             98887--89997170499974353--3----089428987767---72899999868984---99995364444656612
Q gi|254781017|r    2 GQCLH--KICVSAPGSLVLMGEHG--V----LHGHAALVFAIN---KRVILYLTLRKDRL---INIDSSLGQYCGSLDLA   67 (324)
Q Consensus         2 ~~~~~--ki~~~aPGKv~L~GEh~--v----~~G~~ai~~aI~---~~~~~~~~~~~~~~---i~i~~~~~~~~~~~~~~   67 (324)
                      |.-|.  +.+|+||-.|-|+=..-  +    +==.+.|+++++   .++..+++.+++..   +.++..    ....+..
T Consensus        18 ~~~~~~~~~t~~AP~NIAlIKYWGKrd~~l~lP~n~SiS~TL~~d~~~T~Ttv~~s~~~~~d~~~lNG~----~~~~~~~   93 (416)
T 1fi4_A           18 GSHMTVYTASVTAPVNIATLKYWGKRDTKLNLPTNSSISVTLSQDDLRTLTSAATAPEFERDTLWLNGE----PHSIDNE   93 (416)
T ss_dssp             -----CEEEEEEECCEEEEECCCCEEETTTTEESSCEEEEEBCTTTSCEEEEEEECTTCCSCBCTTTCC----BSSSSSS
T ss_pred             CCCEEEEEEEEEEECCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCEEEECCE----ECCCCCH
T ss_conf             870389999997534332640157668767899998147893699987789999788887787999998----6576308


Q ss_pred             HCCCHHHHHHHH---HHHHC------CCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
Q ss_conf             015089999999---99718------778738999826875354887402456655677764045666601455788887
Q gi|254781017|r   68 MFHPSFSFIIMA---INHIK------PSCGFDLKVISQLDSQLGLGSSAAITVAITAALLTLQYHKEPSPDEILTTAHAI  138 (324)
Q Consensus        68 ~~~~~~~~i~~~---l~~~~------~~~g~~i~i~s~iP~g~GLGSSaa~~va~~~al~~~~~~~~~~~~~i~~lA~~~  138 (324)
                      .....++.+...   +....      ....++|...+++|.++||+||||..+|++.++..+ ++.+++..++.++|...
T Consensus        94 r~~~~l~~ir~l~~~~~~~~~~~~~~~~~~l~I~S~NnfPtaaGLASSASg~AAl~~al~~l-~~~~l~~~elS~lAR~G  172 (416)
T 1fi4_A           94 RTQNCLRDLRQLRKEMESKDASLPTLSQWKLHIVSENNFPTAAGLASSAAGFAALVSAIAKL-YQLPQSTSEISRIARKG  172 (416)
T ss_dssp             SHHHHHHHHHHHHHHHHTTCTTSCCGGGSCEEEEEEECCCTTSCCCHHHHHHHHHHHHHHHH-TTCCSCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH-HCCCCCHHHHHHHHHHC
T ss_conf             89999999999998754012246533462289999568842246888999999999999998-56778889999998610


Q ss_pred             HHHHCCCCCCHHHHHHHCCCEEEEEECCCE------EEEEE----CC-CC--CCEEECCCC-C-CHHHHHHHHHHHHHHC
Q ss_conf             765214688754477662985899852751------56730----47-77--526765841-7-9899998889988608
Q gi|254781017|r  139 VLKVQGISSGIDLAASIHGGLICYQMPKYS------IEKID----FI-FP--IHLIYSGYK-T-PTAQVLKKISYIEIEY  203 (324)
Q Consensus       139 E~~~~g~~sG~D~~a~~~Gg~i~~~~~~~~------~~~~~----~~-~~--l~l~~tg~~-~-~T~~~v~~v~~~~~~~  203 (324)
                      +        | -.+.|+|||++.+..+...      ..++.    ++ ..  +++++...+ . +|..+..    .....
T Consensus       173 S--------G-SAcRSi~GG~v~W~~g~~~dgsds~A~~v~~~~~~p~l~~iilvv~~~~K~vsST~gm~~----~v~tS  239 (416)
T 1fi4_A          173 S--------G-SACRSLFGGYVAWEMGKAEDGHDSMAVQIADSSDWPQMKACVLVVSDIKKDVSSTQGMQL----TVATS  239 (416)
T ss_dssp             H--------G-GGGGGGSSSEEEEECCSCTTCTTCEEEEEECGGGSTTEEEEEEEECCCSCCCCHHHHHHH----HHHHC
T ss_pred             C--------C-CHHHHHHCCEEEECCCCCCCCCCCEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCHHC----CCCCC
T ss_conf             6--------3-445564088778437888778763478715655664400389983466555656310111----54557


Q ss_pred             CCHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHH--C------CCCHHHH---HHHHHHHHC-CCCE
Q ss_conf             23489999999840332078898730486445689999989999861--6------7877999---999999971-9945
Q gi|254781017|r  204 PEINEINQKIYALMGKLSQISCQALRNKNLKVLAQAMNRQQGLLETL--G------VSDSKLS---EIVWKLREQ-PHIM  271 (324)
Q Consensus       204 ~~~~~~~~~~~~~~~~i~~~~~~al~~~d~~~l~~lm~~~~~~L~~l--g------vs~~~l~---~li~~~~~~-~g~~  271 (324)
                      |.+.+..+..   ..+...+...|++++|++.|++++-..-..|.++  .      .-+|...   ++|+..++. ++..
T Consensus       240 ~~~~~~~~~~---a~~~~~~m~~Ai~~~Df~~~~ei~e~ds~~mHa~~l~s~Ppi~Y~~~~s~~ii~~v~~~r~~~~~~~  316 (416)
T 1fi4_A          240 ELFKERIEHV---VPKRFEVMRKAIVEKDFATFAKETMMDSNSFHATCLDSFPPIFYMNDTSKRIISWCHTINQFYGETI  316 (416)
T ss_dssp             SHHHHHHHTH---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSSSCCCCCCHHHHHHHHHHHHHHHHHTSCC
T ss_pred             CCHHHHHHHH---HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHCCCCC
T ss_conf             5789999875---0668999999998389999999999989999999863699847568427999999999998638972


Q ss_pred             EEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHH
Q ss_conf             9972689975489998466532689999999999
Q gi|254781017|r  272 ASKISGSGLGDCVIALGKGDLNSLPYQSVNCHMH  305 (324)
Q Consensus       272 ~aklsGAG~GG~~i~l~~~~~~~~~~~~~~~~~~  305 (324)
                      .+-..+||+  .+..|++.+..+.+.+.+...+.
T Consensus       317 ~~yT~DAGP--Nv~il~~~~~~~~v~~~l~~~f~  348 (416)
T 1fi4_A          317 VAYTFDAGP--NAVLYYLAENESKLFAFIYKLFG  348 (416)
T ss_dssp             EEEEECSSS--CEEEEEEGGGHHHHHHHHHHHHT
T ss_pred             EEEEECCCC--CEEEEECHHHHHHHHHHHHHHCC
T ss_conf             899967887--77999747669999999999769