HHsearch results for GI: 254781017 and protein with PDBid: 2gs8_A
>2gs8_A Mevalonate pyrophosphate decarboxylase; structural genomics, PSI, protein structure initiative; HET: MSE; 1.50A {Streptococcus pyogenes m1 gas}
Probab=99.85 E-value=3.1e-18 Score=133.16 Aligned_cols=284 Identities=12% Similarity=0.076 Sum_probs=175.3
Q ss_pred CCEEEEECCEEEEEECCC--EEE----CCCEEEEEEEC-CEEEEEEEECCCC--EEEEEECCCCCCCCCCHHHCCCHHHH
Q ss_conf 878999717049997435--330----89428987767-7289999986898--49999536444465661201508999
Q gi|254781017|r 5 LHKICVSAPGSLVLMGEH--GVL----HGHAALVFAIN-KRVILYLTLRKDR--LINIDSSLGQYCGSLDLAMFHPSFSF 75 (324)
Q Consensus 5 ~~ki~~~aPGKv~L~GEh--~v~----~G~~ai~~aI~-~~~~~~~~~~~~~--~i~i~~~~~~~~~~~~~~~~~~~~~~ 75 (324)
++.|+++||-.|-|+=.+ .+. =-.+.|++++| .++..+++..++. ...+..... ...+ .....
T Consensus 6 ~~~vt~~a~~NIAliKYWGK~d~~~~lP~n~SiS~TL~~~~T~T~v~~~~~~~~~d~~~~ng~-----~~~~---~~~~~ 77 (317)
T 2gs8_A 6 PNVITVTSYANIAIIKYWGKENQAKMIPSTSSISLTLENMFTTTSVSFLPDTATSDQFYINGI-----LQND---EEHTK 77 (317)
T ss_dssp CCEEEEEEEEEEEEECCCCEEETTTTEESSCEEEEEEEEEEEEEEEEECCTTCCSCEEEETTE-----ECCH---HHHHH
T ss_pred CCCEEEEECCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCEEEEECCE-----ECCC---HHHHH
T ss_conf 993899932618888305756888878999825169678986899998358888539999998-----7780---67889
Q ss_pred HHHHHHHHCC--CCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHH
Q ss_conf 9999997187--78738999826875354887402456655677764045666601455788887765214688754477
Q gi|254781017|r 76 IIMAINHIKP--SCGFDLKVISQLDSQLGLGSSAAITVAITAALLTLQYHKEPSPDEILTTAHAIVLKVQGISSGIDLAA 153 (324)
Q Consensus 76 i~~~l~~~~~--~~g~~i~i~s~iP~g~GLGSSaa~~va~~~al~~~~~~~~~~~~~i~~lA~~~E~~~~g~~sG~D~~a 153 (324)
+...+.++.. ...++|++..++|.++|||||||..+|++.|++.+ ++.+++.+++.++|...| | ..+.
T Consensus 78 ~~~~~~~~~~~~~~~~~I~s~n~~P~aaGLaSSAs~~aA~~~a~~~~-~~~~l~~~~ls~lAr~gs----G-----Sa~r 147 (317)
T 2gs8_A 78 ISAIIDQFRQPGQAFVKMETQNNMPTAAGLSSSSSGLSALVKACDQL-FDTQLDQKALAQKAKFAS----G-----SSSR 147 (317)
T ss_dssp HHHHHTTTCCTTCCCEEEEEECCSCGGGCCCHHHHHHHHHHHHHHHH-HTCCCCHHHHHHHHHHHH----G-----GGGG
T ss_pred HHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHH-CCCCCCHHHHHHHHHHCC----C-----CCCC
T ss_conf 99999862431366089999725753100000688999999999997-378888899999997528----7-----7051
Q ss_pred HHCCCEEEEEECCCEEEEEECCCCC----CEEECCCC--CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHH
Q ss_conf 6629858998527515673047775----26765841--79899998889988608234899999998403320788987
Q gi|254781017|r 154 SIHGGLICYQMPKYSIEKIDFIFPI----HLIYSGYK--TPTAQVLKKISYIEIEYPEINEINQKIYALMGKLSQISCQA 227 (324)
Q Consensus 154 ~~~Gg~i~~~~~~~~~~~~~~~~~l----~l~~tg~~--~~T~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~a 227 (324)
|+|||++.+......+..++..+++ +++....+ .+|..+ +......+...+....... -......|
T Consensus 148 Si~GG~v~w~~~~~~~~~~~~~~~~~~~i~~v~~~~k~v~St~~~----~~~~~~s~~~~~~~~~~~~----~~~~~~~a 219 (317)
T 2gs8_A 148 SFFGPVAAWDKDSGAIYKVETDLKMAMIMLVLNAAKKPISSREGM----KLCRDTSTTFDQWVEQSAI----DYQHMLTY 219 (317)
T ss_dssp GGSCSEEEECTTTCCEEECCCCCCEEEEEEECCCSSCCSCHHHHH----HHHHHHCTTHHHHHHHHHH----HHHHHHHH
T ss_pred HHHCCEEEEECCCCCEEECCCCCCHHEEEEEEECCCCCCCCHHHH----HHHHCCCHHHHHHHHHHHH----HHHHHHHH
T ss_conf 431886899518985021478973336999972367666540768----8652020257888987436----79999999
Q ss_pred HCCCCHHHHHHHHHHH----HHHHHH--HC--CCCHHH---HHHHHHHHHCCCCEEEECCCCCCCCEEEEEECCCCCHHH
Q ss_conf 3048644568999998----999986--16--787799---999999997199459972689975489998466532689
Q gi|254781017|r 228 LRNKNLKVLAQAMNRQ----QGLLET--LG--VSDSKL---SEIVWKLREQPHIMASKISGSGLGDCVIALGKGDLNSLP 296 (324)
Q Consensus 228 l~~~d~~~l~~lm~~~----~~~L~~--lg--vs~~~l---~~li~~~~~~~g~~~aklsGAG~GG~~i~l~~~~~~~~~ 296 (324)
++++|++.|++++-.. |..+++ .. .-+|.. -+.|+.+++ .|..++-.+|||+ .+.+|++++..+++
T Consensus 220 l~~~D~~~l~~~~e~d~~~lHa~~~~~~pp~~~~~~~t~~vi~~i~~~r~-~G~~~~~t~dAGP--nV~~l~~~~~~~~i 296 (317)
T 2gs8_A 220 LKTNNFEKVGQLTEANALAMHATTKTANPPFSYLTKESYQAMEAVKELRQ-EGFACYFTMDAGP--NVKVLCLEKDLAQL 296 (317)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHHHTTSSSCCCSCCHHHHHHHHHHHHHHH-TTCCEEEECCSSS--CEEEEEEGGGHHHH
T ss_pred HHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHH-CCCCEEEEECCCC--CEEEEECHHHHHHH
T ss_conf 98799999999999999999999983599724218259999999999996-8982999926882--67999736029999
Q ss_pred HHHHHHHHHHCCCEEEEEECCCCCCC
Q ss_conf 99999999977978999414545644
Q gi|254781017|r 297 YQSVNCHMHAKGIDIVPITPSHSTSL 322 (324)
Q Consensus 297 ~~~~~~~~~~~g~~~~~~~~~~~~~~ 322 (324)
.+. +. +.|+++.-++..|+++
T Consensus 297 ~~~----l~-~~~~~i~~~~g~~~~v 317 (317)
T 2gs8_A 297 AER----LG-KNYRIIVSKTKDLPDV 317 (317)
T ss_dssp HHH----HH-TTSEEEEEEBCCCCCC
T ss_pred HHH----HH-HHCCEEEECCCCCCCC
T ss_conf 999----97-6136998168989899