HHsearch results for GI: 254781017 and protein with PDBid: 2hk2_A

>2hk2_A Diphosphomevalonate decarboxylase; mevalonate diphosphate decarboxylase, lyase; 2.30A {Staphylococcus aureus} PDB: 2hk3_A
Probab=99.89  E-value=3.8e-21  Score=151.65  Aligned_cols=299  Identities=11%  Similarity=0.029  Sum_probs=177.7

Q ss_pred             CCCCCCEEEEECCEEEEEE---CCCEEEC---CCEEEEEEEC-CEEEEEEEECCCC-EEEEEECCCCCCCCCCHHHCCCH
Q ss_conf             9988878999717049997---4353308---9428987767-7289999986898-49999536444465661201508
Q gi|254781017|r    1 MGQCLHKICVSAPGSLVLM---GEHGVLH---GHAALVFAIN-KRVILYLTLRKDR-LINIDSSLGQYCGSLDLAMFHPS   72 (324)
Q Consensus         1 ~~~~~~ki~~~aPGKv~L~---GEh~v~~---G~~ai~~aI~-~~~~~~~~~~~~~-~i~i~~~~~~~~~~~~~~~~~~~   72 (324)
                      |=|.|+..+++||-.+-|+   |-+-.-+   -.+.|++++| .+++.+++.+++. ...+.......    +.......
T Consensus         2 ~~~~~~~~~a~a~~nialiKYwGk~d~~~~~P~n~SiS~tl~~~~t~t~v~~~~~~~~d~~~~ng~~~----~~~~~~~i   77 (331)
T 2hk2_A            2 MLEMIKSGKARAHTNIALIKYWGKKDEALIIPMNNSISVTLEKFYTETKVTFNDQLTQDQFWLNGEKV----SGKELEKI   77 (331)
T ss_dssp             HHHHCEEEEEEEEEEEEEECCCCEEETTTTEESSCEEEEEEEEEEEEEEEEEETTCCSCEEEETTEEE----CTHHHHHH
T ss_pred             HHHCCCCEEEECCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCEEEEECCEEC----CCHHHHHH
T ss_conf             24415523998765068885227567777788998776897788017999980698851899999538----82688999


Q ss_pred             HHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHH
Q ss_conf             99999999971877873899982687535488740245665567776404566660145578888776521468875447
Q gi|254781017|r   73 FSFIIMAINHIKPSCGFDLKVISQLDSQLGLGSSAAITVAITAALLTLQYHKEPSPDEILTTAHAIVLKVQGISSGIDLA  152 (324)
Q Consensus        73 ~~~i~~~l~~~~~~~g~~i~i~s~iP~g~GLGSSaa~~va~~~al~~~~~~~~~~~~~i~~lA~~~E~~~~g~~sG~D~~  152 (324)
                      .+++...-+......+++|++.+++|.++|||||||..+|++.|++.+ ++.+++.+++.++|...|        | |.+
T Consensus        78 ~~~~~~~r~~~~~~~~~~I~s~n~iP~~~GLgSSAa~~aA~~~a~~~~-~~~~l~~~el~~lA~~gs--------G-s~~  147 (331)
T 2hk2_A           78 SKYMDIVRNRAGIDWYAEIESDNFVPTAAGLASSASAYAALAAACNQA-LDMQLSDKDLSRLARIGS--------G-SAS  147 (331)
T ss_dssp             HHHHHHHHHHHTCCCEEEEEEEEESCGGGTCCCHHHHHHHHHHHHHHH-TTCCCCHHHHHHHHHTTC--------G-GGG
T ss_pred             HHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH-HCCCCCHHHHHHHHHHCC--------C-CCC
T ss_conf             999999998619987479999736875333257899999999999876-205799899999976428--------7-621


Q ss_pred             HHHCCCEEEEEECCCE--E--EEEEC-----CCCCCEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHH
Q ss_conf             7662985899852751--5--67304-----7775267658417989999888998860823489999999840332078
Q gi|254781017|r  153 ASIHGGLICYQMPKYS--I--EKIDF-----IFPIHLIYSGYKTPTAQVLKKISYIEIEYPEINEINQKIYALMGKLSQI  223 (324)
Q Consensus       153 a~~~Gg~i~~~~~~~~--~--~~~~~-----~~~l~l~~tg~~~~T~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~  223 (324)
                      .|.|||++.+......  .  .++..     ....+++.......|....+......+..|...++.+...    .....
T Consensus       148 ~si~GG~v~~~~~~~~~~~~~~~l~~~~~~~~~~~vi~~~~~~~k~~~s~~~~~~~~~~~~~~~~~~~~~~----~~~~~  223 (331)
T 2hk2_A          148 RSIYGGFAEWEKGYSDETSYAVPLESNHFEDDLAMIFVVINQHSKKVPSRYGMSLTRNTSRFYQYWLDHID----EDLAE  223 (331)
T ss_dssp             GGGSSSEEEEECCSSTTTCEEEECCCTTGGGGEEEEEECCCCSSCCCCHHHHHHHHHHHCTTHHHHHHHHH----HHHHH
T ss_pred             CCEECCEEEEECCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHH----HHHHH
T ss_conf             01168766774478876633555404667875238999378545532455420001146608999998756----77999


Q ss_pred             HHHHHCCCCHHHHHHHHHHH----HHHHHH--HC-----CCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEECCCC
Q ss_conf             89873048644568999998----999986--16-----78779999999999719945997268997548999846653
Q gi|254781017|r  224 SCQALRNKNLKVLAQAMNRQ----QGLLET--LG-----VSDSKLSEIVWKLREQPHIMASKISGSGLGDCVIALGKGDL  292 (324)
Q Consensus       224 ~~~al~~~d~~~l~~lm~~~----~~~L~~--lg-----vs~~~l~~li~~~~~~~g~~~aklsGAG~GG~~i~l~~~~~  292 (324)
                      ...++.++|++.|++++...    |..+..  ..     ..++++.++++.+++ .|+.++-++|||+  .+++|++++.
T Consensus       224 l~~al~~~D~~~l~~~~e~d~~~~h~~~~~~~~~~~~~~~~t~~i~~~i~~~r~-~G~~~~~~sgAGP--tv~~l~~~~~  300 (331)
T 2hk2_A          224 AKAAIQDKDFKRLGEVIEENGLRMHATNLGSTPPFTYLVQESYDVMALVHECRE-AGYPCYFTMDAGP--NVKILVEKKN  300 (331)
T ss_dssp             HHHHHHTTCHHHHHHHHHHHHHHHHHHHTTSSSCCCSCCHHHHHHHHHHHHHHH-TTCCEEEECCSSS--CEEEEEEHHH
T ss_pred             HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHH-CCCCEEEEECCCH--HEEEEECHHH
T ss_conf             999987699999999998768877998753478611004205999999999985-8984999956763--4499987868


Q ss_pred             CHHHHHHHHHHHHHCCCEEEEEEC-CCCCCC
Q ss_conf             268999999999977978999414-545644
Q gi|254781017|r  293 NSLPYQSVNCHMHAKGIDIVPITP-SHSTSL  322 (324)
Q Consensus       293 ~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~  322 (324)
                      .+++++.+.....  ..+++.... ..|.++
T Consensus       301 ~~~v~~~l~~~f~--~~~~~i~~~~~~G~~i  329 (331)
T 2hk2_A          301 KQQIIDKLLTQFD--NNQIIDSDIIATGIEI  329 (331)
T ss_dssp             HHHHHHHHTTTSC--GGGEEEEEBCCSCCEE
T ss_pred             HHHHHHHHHHHCC--CCEEEEECCCCCCCEE
T ss_conf             9999999996499--7629996367988875