HHsearch results for GI: 254781017 and protein with PDBid: 3f0n_A
>3f0n_A Mevalonate pyrophosphate decarboxylase; cholesterol biosynthesis, lipid synthesis, lyase, steroid biosynthesis, sterol biosynthesis; 1.90A {Mus musculus} PDB: 3d4j_A
Probab=99.58 E-value=2.3e-12 Score=96.05 Aligned_cols=277 Identities=13% Similarity=0.160 Sum_probs=152.9
Q ss_pred CCCCCEEEEECCEEEEEEC---CCE---EECCCEEEEEEE---CCEEEEEEEECCC---CEEEEEECCCCCCCCCCHHHC
Q ss_conf 9888789997170499974---353---308942898776---7728999998689---849999536444465661201
Q gi|254781017|r 2 GQCLHKICVSAPGSLVLMG---EHG---VLHGHAALVFAI---NKRVILYLTLRKD---RLINIDSSLGQYCGSLDLAMF 69 (324)
Q Consensus 2 ~~~~~ki~~~aPGKv~L~G---Eh~---v~~G~~ai~~aI---~~~~~~~~~~~~~---~~i~i~~~~~~~~~~~~~~~~ 69 (324)
||-...|+|+||-.|-|+= -+- .+=-.+.|++++ +.++..+++.+++ +.+.+.... ........
T Consensus 18 ~~~~~~vT~~Ap~NIAlIKYWGKrD~~l~lP~N~SiS~TL~~~~~~T~Ttv~~s~~~~~D~~~lNGk~----~~~~~~Ri 93 (414)
T 3f0n_A 18 GPQDLMVTCTAPVNIAVIKYWGKRDEALILPINSSLSVTLHQDQLKTTTTVAISKDFTEDRIWLNGRE----EDVGQPRL 93 (414)
T ss_dssp ---CEEEEEEECCEEEEECCCCEEETTTTEESSCEEEEEBCTTTSCEEEEEEECTTCCSCEEEETTEE----ECTTCHHH
T ss_pred CCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCEEEECCEE----CCCCCHHH
T ss_conf 66663899982367525412575688778999980579805888678999997888878789999997----77635789
Q ss_pred CCHHHHHHHHHHHHC-----------CCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
Q ss_conf 508999999999718-----------778738999826875354887402456655677764045666601455788887
Q gi|254781017|r 70 HPSFSFIIMAINHIK-----------PSCGFDLKVISQLDSQLGLGSSAAITVAITAALLTLQYHKEPSPDEILTTAHAI 138 (324)
Q Consensus 70 ~~~~~~i~~~l~~~~-----------~~~g~~i~i~s~iP~g~GLGSSaa~~va~~~al~~~~~~~~~~~~~i~~lA~~~ 138 (324)
...++.++...+... ....++|...+++|..+||+|||+..+|++.++..+. +.+ .++.++|...
T Consensus 94 ~~~l~~ir~~~~~~~~~~~~~~~p~~~~~~~~I~S~NnfPtaAGLASSASg~aALa~al~~l~-~l~---~~lS~iARlG 169 (414)
T 3f0n_A 94 QACLREIRRLARKRRSTEDGDTLPLSLSYKVHVASVNNFPTAAGLASSAAGYACLAYTLAQVY-GVE---GDLSEVARRG 169 (414)
T ss_dssp HHHHHHHHHHHHC-------CCHHHHHHSCEEEEEEECCCGGGCCCHHHHHHHHHHHHHHHHH-TCC---SCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH-CCC---HHHHHHHHHH
T ss_conf 999999999987631112233465455642699851476166678887999999999999885-353---3599999860
Q ss_pred HHHHCCCCCCHHHHHHHCCCEEEEEECCC------EEEEEE--CCCC-----CCEEECCCCC-C-HHHHHHHHHHHHHHC
Q ss_conf 76521468875447766298589985275------156730--4777-----5267658417-9-899998889988608
Q gi|254781017|r 139 VLKVQGISSGIDLAASIHGGLICYQMPKY------SIEKID--FIFP-----IHLIYSGYKT-P-TAQVLKKISYIEIEY 203 (324)
Q Consensus 139 E~~~~g~~sG~D~~a~~~Gg~i~~~~~~~------~~~~~~--~~~~-----l~l~~tg~~~-~-T~~~v~~v~~~~~~~ 203 (324)
+ |++ .-++|||++.+..+.. ...++. ..++ +++++...+. + |..+.. ..+..
T Consensus 170 S----GSA-----~RSi~GGfv~W~~g~~~dgsds~a~~i~~~~~~p~l~~iilivd~~~K~vsSt~gm~~----~~~tS 236 (414)
T 3f0n_A 170 S----GSA-----CRSLYGGFVEWQMGEQADGKDSIARQIAPEWHWPQLRILILVVSADKKQTGSTVGMQT----SVETS 236 (414)
T ss_dssp C----GGG-----GGGGSSSEEEECCCSCTTCTTCCEEEEECTTSCTTEEEEEEEESCCC-CCCHHHHHHH----HHHHC
T ss_pred C----CCC-----CCCCCCCEEEECCCCCCCCCCCCCEECCCCCCCCCCCEEEEEECCCCCCCCCHHHHHH----HHHCC
T ss_conf 7----885-----3103166456046788788765303346644565100699982465566776787764----01036
Q ss_pred CCHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHH------C--CCCHH---HHHHHHHHHHC-CCCE
Q ss_conf 23489999999840332078898730486445689999989999861------6--78779---99999999971-9945
Q gi|254781017|r 204 PEINEINQKIYALMGKLSQISCQALRNKNLKVLAQAMNRQQGLLETL------G--VSDSK---LSEIVWKLREQ-PHIM 271 (324)
Q Consensus 204 ~~~~~~~~~~~~~~~~i~~~~~~al~~~d~~~l~~lm~~~~~~L~~l------g--vs~~~---l~~li~~~~~~-~g~~ 271 (324)
|......+.. .....++..+||+++|++.|++++-..-..+.++ . .-+|. +-++|+..++. ++.-
T Consensus 237 p~~~~r~~~~---~~~~i~~m~~Ai~~~Df~~fgel~e~dsl~mHA~~l~s~Pp~~Y~~~~s~~ii~~V~~~r~~~~~~~ 313 (414)
T 3f0n_A 237 TLLKFRAESV---VPERMKEMTRCIQEQDFQGFAQLTMKDSNQFHATCLDTFPPISYLNDTSRRIIQLVHRFNTHHGQTK 313 (414)
T ss_dssp HHHHHHHHHT---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSSSCCCCCCHHHHHHHHHHHHHHHHHTSCC
T ss_pred CHHHHHHHHH---HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHCCCCC
T ss_conf 4799999986---5899999999999599999999999999999999854799858767648999999999999669976
Q ss_pred EEECCCCCCCCEEEEEECCCCCHHHHHHHHHHH
Q ss_conf 997268997548999846653268999999999
Q gi|254781017|r 272 ASKISGSGLGDCVIALGKGDLNSLPYQSVNCHM 304 (324)
Q Consensus 272 ~aklsGAG~GG~~i~l~~~~~~~~~~~~~~~~~ 304 (324)
.+--.+||+ .+..|+.++..+.+++.++..+
T Consensus 314 v~~T~DAGP--Nv~il~~~~~~~~v~~~l~~~f 344 (414)
T 3f0n_A 314 VAYTFDAGP--NAVIFTLEDTVAEFVAAVRHSF 344 (414)
T ss_dssp EEEECCSSS--CEEEEEEHHHHHHHHHHHHHHS
T ss_pred EEEEECCCC--CEEEEEECCCHHHHHHHHHHHC
T ss_conf 899978887--8799973254999999999878