HHsearch results for GI: 254781017 and protein with PDBid: 3k85_A
>3k85_A D-glycero-D-manno-heptose 1-phosphate kinase; bacteriodes thetaiotaomicron, protein structure initiative II(PSI II), nysgxrc; 2.28A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=0 Score=363.37 Aligned_cols=303 Identities=17% Similarity=0.157 Sum_probs=236.7
Q ss_pred CCEEEEECCEEEEEECCCEEE------CCCEEEEEEECCEEEEEEEECCCCEEEEEECCCCCCCC------CCHHHCCCH
Q ss_conf 878999717049997435330------89428987767728999998689849999536444465------661201508
Q gi|254781017|r 5 LHKICVSAPGSLVLMGEHGVL------HGHAALVFAINKRVILYLTLRKDRLINIDSSLGQYCGS------LDLAMFHPS 72 (324)
Q Consensus 5 ~~ki~~~aPGKv~L~GEh~v~------~G~~ai~~aI~~~~~~~~~~~~~~~i~i~~~~~~~~~~------~~~~~~~~~ 72 (324)
|+=|.+||||||+|+|||+|| ||+.+|++|||+|+++++++++++.+.+.+........ .....+...
T Consensus 1 ~~~i~~raP~RI~l~G~~tD~~~~~~~~gG~via~AId~~~~v~v~~~~~~~i~i~~~d~~~~~~~~~~~~~~~~~~~~~ 80 (357)
T 3k85_A 1 MSLVRSKAPLRLGLAGGGSDVSPYSDIYGGLILNATINLYAYCTIEETNSGRIEINAYDAQCCKSYLSMSQLEIDGEASL 80 (357)
T ss_dssp --CEEEEEEEEEEEECTTTTSTTHHHHTCEEEEEEEEEEEEEEEEEECSSSEEEEEETTTTEEEEEECCSSCCCCSSSHH
T ss_pred CCEEEEECCEEEEEECCCCCCCHHHCCCCCEEEEEEECCCEEEEEEECCCCEEEEEECCCCCEEEEECCCCCCCCCHHHH
T ss_conf 96999989997898707636811334489799999986818999999999969999658885169812431234660678
Q ss_pred HHHHH-HHHHH-HCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCC-H
Q ss_conf 99999-99997-187787389998268753548874024566556777640456666014557888877652146887-5
Q gi|254781017|r 73 FSFII-MAINH-IKPSCGFDLKVISQLDSQLGLGSSAAITVAITAALLTLQYHKEPSPDEILTTAHAIVLKVQGISSG-I 149 (324)
Q Consensus 73 ~~~i~-~~l~~-~~~~~g~~i~i~s~iP~g~GLGSSaa~~va~~~al~~~~~~~~~~~~~i~~lA~~~E~~~~g~~sG-~ 149 (324)
+...+ ..++. .....|++|.++|++|.|+|||||||++||++.|++.+ ++..+++++++++|+.+|..++|.+|| +
T Consensus 81 i~~~~~~~~~~~~~~~~g~~i~i~S~iP~gsGLGSSAA~~Va~~~al~~~-~~~~l~~~~l~~~a~~~E~~~~g~~~G~~ 159 (357)
T 3k85_A 81 IKGVYNRIIRDYRLEPKSFKITTYNDAPAGSGLGTSSTMVVCILKAFIEW-LSLPLGDYETSRLAYEIERKDLGLSGGKQ 159 (357)
T ss_dssp HHHHHHHHHHHTTCCCCCEEEEEEESSCSSSSSCHHHHHHHHHHHHHHHH-HTCCCCHHHHHHHHHHHHHTTTCCCCCSH
T ss_pred HHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHH-HHHHCCCHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 99999999997278898759999657868889884068889889998865-54511538899999987665428987765
Q ss_pred HHHHHHCCCEEEEEECCCEEEE---EEC--------CCCCCEEECCCCCCHHHHHHHHHHH-HHHCCCHHHHHHHHHHHH
Q ss_conf 4477662985899852751567---304--------7775267658417989999888998-860823489999999840
Q gi|254781017|r 150 DLAASIHGGLICYQMPKYSIEK---IDF--------IFPIHLIYSGYKTPTAQVLKKISYI-EIEYPEINEINQKIYALM 217 (324)
Q Consensus 150 D~~a~~~Gg~i~~~~~~~~~~~---~~~--------~~~l~l~~tg~~~~T~~~v~~v~~~-~~~~~~~~~~~~~~~~~~ 217 (324)
||+++++||++++++.+..... +.+ ..++++++|+.+++|++++..+... ....+...+... .+
T Consensus 160 D~~~~~~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~tg~~~~s~~~~~~~~~~~~~~~~~~~~~~~----~~ 235 (357)
T 3k85_A 160 DQYAAAFGGFNYMEFLQNDLVIVNPLKMKRWIVDELESSMVLYFTGRSRSSAAIINEQKKNTSEGNQTAIEAMH----KI 235 (357)
T ss_dssp HHHHHHHCSEEEEEEETTTEEEEEEECCCHHHHHHHHHTEEEECC---------------------CCTTHHHH----HH
T ss_pred CCHHHCCCCCCEEEECCCCCEEECCCCCCHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH----HH
T ss_conf 40645167621577405884377112320445555430332542475330776667888766430188998887----77
Q ss_pred CCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHH--CCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEECCCCCHH
Q ss_conf 332078898730486445689999989999861--678779999999999719945997268997548999846653268
Q gi|254781017|r 218 GKLSQISCQALRNKNLKVLAQAMNRQQGLLETL--GVSDSKLSEIVWKLREQPHIMASKISGSGLGDCVIALGKGDLNSL 295 (324)
Q Consensus 218 ~~i~~~~~~al~~~d~~~l~~lm~~~~~~L~~l--gvs~~~l~~li~~~~~~~g~~~aklsGAG~GG~~i~l~~~~~~~~ 295 (324)
.+++.++.++++++|++.|+++|+++|..+..+ ++|+|+++++++.+++ .|++|+|+||||||||+++|++++..
T Consensus 236 ~~~~~~~~~a~~~~d~~~lg~lm~~~~~~~~~l~~~vs~~~ld~l~~~a~~-~Ga~gaKlsGAGgGG~~~~l~~~~~~-- 312 (357)
T 3k85_A 236 KQSAIDTKLALLKGDVGEFARILGEGWENKKKMAGAITNPMIQEAFDVATG-AGAMAGKVSGAGGGGFIMFVVEPTRK-- 312 (357)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHHHTTC-----------CCSCTTTT-SCCSEEEECCCC---CEEEECCHHHH--
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH-CCCEEEEEEEECHHHEEEEEECHHHH--
T ss_conf 666677787663026999999999999987764147998999999999976-89969999730610289999876459--
Q ss_pred HHHHHHHHHHHCCCEEEEEECC
Q ss_conf 9999999999779789994145
Q gi|254781017|r 296 PYQSVNCHMHAKGIDIVPITPS 317 (324)
Q Consensus 296 ~~~~~~~~~~~~g~~~~~~~~~ 317 (324)
+++.+++...|++.++.+.+
T Consensus 313 --~~~~~~l~~~~~~~~~~~~~ 332 (357)
T 3k85_A 313 --EEVVRALNNLNGFVMPFQFI 332 (357)
T ss_dssp --HHHHHHHHTSSSCBCCCCBC
T ss_pred --HHHHHHHHHCCCEEEEEEEC
T ss_conf --99999998779849999991