HHsearch results for GI: 254781017 and protein with PDBid: 3lto_A
>3lto_A Mevalonate diphosphate decarboxylase; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.27A {Legionella pneumophila}
Probab=99.79 E-value=2.7e-16 Score=120.92 Aligned_cols=290 Identities=15% Similarity=0.097 Sum_probs=162.0
Q ss_pred CEEEEECCEEEEEE---CCCE---EECCCEEEEEEECC-EEEEEEEECCCCEEEEEECCCCCCCCCCH----HHCCCHHH
Q ss_conf 78999717049997---4353---30894289877677-28999998689849999536444465661----20150899
Q gi|254781017|r 6 HKICVSAPGSLVLM---GEHG---VLHGHAALVFAINK-RVILYLTLRKDRLINIDSSLGQYCGSLDL----AMFHPSFS 74 (324)
Q Consensus 6 ~ki~~~aPGKv~L~---GEh~---v~~G~~ai~~aI~~-~~~~~~~~~~~~~i~i~~~~~~~~~~~~~----~~~~~~~~ 74 (324)
.|.+++||-.|-|+ |-.- .+==.+.|++++|. ++.++++..++.....+.... ...... ......+.
T Consensus 1 m~~~a~Ap~NIAliKYWGK~d~~~~lP~n~SiSlTL~~~~T~t~v~~~~~~~~~~d~~~l--ng~~~~~~~~~~~~r~~~ 78 (323)
T 3lto_A 1 MHWFAQAPANIALIKYMGKKDENSNLPDNSSLSYTLSNLLSSVKLEKLPTKKDIWEPLTI--PGAPEFNLSVEAQKRFID 78 (323)
T ss_dssp CEEEEEEEEEEEEECCTTCBCTTTCCBSSCEEEEEEEEEEEEEEEEECSSSSCEECCBCT--TSSBCCCCCSHHHHHHHH
T ss_pred CCCEEECCCEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCEEEEE--CCEECCCCCHHHHHHHHH
T ss_conf 983417754468983047568888789997125680699668999984267764216898--983533325799999999
Q ss_pred HHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCC-CCCCHHHHHHHHHHHHHHCCCCCCHHHHH
Q ss_conf 99999997187787389998268753548874024566556777640456-66601455788887765214688754477
Q gi|254781017|r 75 FIIMAINHIKPSCGFDLKVISQLDSQLGLGSSAAITVAITAALLTLQYHK-EPSPDEILTTAHAIVLKVQGISSGIDLAA 153 (324)
Q Consensus 75 ~i~~~l~~~~~~~g~~i~i~s~iP~g~GLGSSaa~~va~~~al~~~~~~~-~~~~~~i~~lA~~~E~~~~g~~sG~D~~a 153 (324)
++....+.+....+++|...+++|.++|||||||..+|++.|++.+.... ..+...+.+++..+|. |-|.+|
T Consensus 79 ~l~~i~~~~~~~~~~~I~s~N~~P~aaGLaSSASa~aA~~~aa~~~~~~~~~~~~~~~~~ls~~ar~-------gSgSaa 151 (323)
T 3lto_A 79 HLVRLKEYFGYVGGFLIQSSNNFPHSSGLASSASSFAALTKCASIALSELTQKPLPSIDEQAQLSRL-------GSGSSC 151 (323)
T ss_dssp HHHHHHHHHTCCCCEEEEEEESSCTTTTCCCHHHHHHHHHHHHHHHHHHHHTCCCCCHHHHHHHHHT-------TCGGGG
T ss_pred HHHHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHC-------CCCCCC
T ss_conf 9999998679874289999568774312110567999999999999740322320028899999722-------899745
Q ss_pred -HHCCCEEEEEECCCEEEEEECCC--C-CCEEECCC-CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHH
Q ss_conf -66298589985275156730477--7-52676584-1798999988899886082348999999984033207889873
Q gi|254781017|r 154 -SIHGGLICYQMPKYSIEKIDFIF--P-IHLIYSGY-KTPTAQVLKKISYIEIEYPEINEINQKIYALMGKLSQISCQAL 228 (324)
Q Consensus 154 -~~~Gg~i~~~~~~~~~~~~~~~~--~-l~l~~tg~-~~~T~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~al 228 (324)
|+|||++.+...+......+++. . ++++.... +.+|.+..+. ....|...+...... ........||
T Consensus 152 rSi~GG~v~w~~~~~~~~~~~~~~~~~~i~vv~~~~k~vsS~~a~~~----~~tsp~~~~~~~~~~----~~~~~~~~Al 223 (323)
T 3lto_A 152 RSFYAPWALWTGDKVSAIDLPYKDLLHQVIVISSQEKEIPSRVAHKL----VKTSPFYETRSERAE----ANLKLLLNAF 223 (323)
T ss_dssp GGGSCSEEEEETTEEEECCCSCCSCEEEEEECCCCTTCCCHHHHHHH----GGGSTTTTTHHHHHH----HHHHHHHHHH
T ss_pred CHHHCCCEEEECCCCCEEECCCCCCCCEEEEECCCCCCCCCHHHHHH----CCCCCCHHHHHHHHH----HHHHHHHHHH
T ss_conf 04428806850798753305764511159994277666772655510----568976699998717----7599999999
Q ss_pred CCCCHHHHHHHHHHH----HHHHHHH--CC--CCHHHHH---HHHHHHHCCCCEEEECCCCCCCCEEEEEECCCCCHHHH
Q ss_conf 048644568999998----9999861--67--8779999---99999971994599726899754899984665326899
Q gi|254781017|r 229 RNKNLKVLAQAMNRQ----QGLLETL--GV--SDSKLSE---IVWKLREQPHIMASKISGSGLGDCVIALGKGDLNSLPY 297 (324)
Q Consensus 229 ~~~d~~~l~~lm~~~----~~~L~~l--gv--s~~~l~~---li~~~~~~~g~~~aklsGAG~GG~~i~l~~~~~~~~~~ 297 (324)
+++|++.|++++-++ |..+.+- .+ -+|+..+ .|+..+...|..++-.+|||+ ++.+|+.++..+.+.
T Consensus 224 ~~~d~~~l~~l~e~d~~~mHa~~~~s~pp~~y~~~~s~~~i~~v~~~r~~~G~~~~~T~DAGP--nv~vl~~~~~~~~v~ 301 (323)
T 3lto_A 224 ENKDWTSIYQICWHEFLDMHQLFKTCEKPFSYITDNTLHILSVIEKFWNEKGDGPVVTMDAGP--NVHLLYRSDQTDLAR 301 (323)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHHHTSSSCCCSCCHHHHHHHHHHHHHHHHHSCCCEEECCSSS--CEEEEECGGGHHHHH
T ss_pred HCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHCCCCEEEEECCCC--CEEEEECCCCHHHHH
T ss_conf 747899999999999999899987059985501826999999999999966993699867883--779997545489999
Q ss_pred HHHHHHHHHCCCEEEEEE
Q ss_conf 999999997797899941
Q gi|254781017|r 298 QSVNCHMHAKGIDIVPIT 315 (324)
Q Consensus 298 ~~~~~~~~~~g~~~~~~~ 315 (324)
+-+++++ ...++++.--
T Consensus 302 ~~~~~~~-~g~~~vl~~~ 318 (323)
T 3lto_A 302 QFKSDHL-VGNYDVLEGH 318 (323)
T ss_dssp HHHHHHT-TTTSEEC---
T ss_pred HHHHHHC-CCCEEEEECC
T ss_conf 9999746-7850577524