HHsearch alignment for GI: 254781018 and conserved domain: COG4542
>COG4542 PduX Protein involved in propanediol utilization, and related proteins (includes coumermycin biosynthetic protein), possible kinase [Secondary metabolites biosynthesis, transport, and catabolism].
Probab=99.34 E-value=9.1e-11 Score=86.59 Aligned_cols=246 Identities=16% Similarity=0.126 Sum_probs=148.1
Q ss_pred CCEEEECCCEEEEECCCE--EEC-CCEEEEEEECCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 608998581799974454--407-95489987667279999984898299995576667532100123333433211111
Q gi|254781018|r 9 PHAHSIAPAKVILSGEYS--SLY-GASALAVAITFYLRALLTTIEPSLIRIINSQTIEYSFEACRLLGHQIDQRHRDFIA 85 (337)
Q Consensus 9 p~~~~~APGKi~L~GEh~--v~~-G~~ai~~aI~~~~~v~i~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (337)
T Consensus 12 ~~~~A~cpAs~---GELlQG~~~g~~~Lvs~PIa~~s~v~~~~~s~~~s~~----------------------------- 59 (293)
T COG4542 12 MVISAKCPASC---GELLQGSFNGSEKLVSFPIALFSEVTLFDRSGKDSVN----------------------------- 59 (293)
T ss_pred CCEEEECCCCH---HHHHEEEECCCCEEEECCHHHHHHEEEECCCCCCCCC-----------------------------
T ss_conf 51114535024---2252336638752898003541004550147876555-----------------------------
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
Q ss_conf 22103347778889999987511566788769999805541038985303789999999998187754025899999986
Q gi|254781018|r 86 KKIPITSVLTHPNDLILYIFNRHLPHISCGISLDLHSTIPIGSGFGSSSAIISALSLALSSITHQPFCNKEKLIAETGYI 165 (337)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~i~s~iP~~~GLGSSaA~~va~~~al~~~~~~~~~~~~~~~~~a~~~ 165 (337)
T Consensus 60 -~t~a~~~~e~~l-----a~~~~~~~~~~~i~l~lqSsIPvgKG~ASSTADl~At~~A~A~~l~~~l~-es~iakLcv~i 132 (293)
T COG4542 60 -VTPAHKFKENIL-----ARWGVTKLINTGIDLLLQSSIPVGKGMASSTADLVATARATARFLGRELR-ESEIAKLCVSI 132 (293)
T ss_pred -CCHHHHHHHHHH-----HHHCCCCEECCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC-HHHHHHHHHHC
T ss_conf -566689999999-----97285101058736998636655556563478899999999999678778-88999998625
Q ss_pred HHCCCCCCCCHHHHHHHHCCCEEEECCCCCCCCC---CCCCEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH
Q ss_conf 4115778773457876532630240278520014---7884399974971453799999999764120689998765489
Q gi|254781018|r 166 ERLQHGKTGIIDSTTIVMGGIIYINPPQIIKNET---LVGEWWAINTGMPESSTGECVSFVEQHFSQSSIWSEFNAVTNE 242 (337)
Q Consensus 166 e~~~~~~~sg~D~~~~~~gg~~~~~~~~~~~~~~---~~~~~~~i~~~~~~~st~~~~~~~~~~~~~~~~~~~~~~i~~~ 242 (337)
T Consensus 133 E--------PtD--siiF~~~tlFd~r~g~~~~~~g~~PpL~ilv~e~~~~v~T~~y-~q~~r~e~~~~~~~e~~~l~~~ 201 (293)
T COG4542 133 E--------PTD--SIIFDKATLFDQREGRVIEFLGEMPPLHILVFEGKGTVETVDY-NQPPRGEKLLAPLAELGNLINL 201 (293)
T ss_pred C--------CCC--CEECCCCEEEHHCCCHHHHHCCCCCCEEEEEECCCCCEEEEEC-CCCCHHHHHHHHHHHHHHHHHH
T ss_conf 8--------765--4000561000220430888637899627999748982333314-6785465655449999999999
Q ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC-EEEECCCCCCCCCEEEEEEEE
Q ss_conf 9999983872168999999599999718997799999999985798-089507886788508999985
Q gi|254781018|r 243 MMENIQKKDAEKTYKSVRVNQSLLESIGVVPETVGKFIRCIENNGG-SAKIAGAGSIRGEKAGLVLVG 309 (337)
Q Consensus 243 ~~~al~~~d~~~l~~~~~~~~~ll~~l~vs~~~l~~l~~~~~~~g~-~ak~sGAG~~~Gg~~~~~l~~ 309 (337)
T Consensus 202 v~~A~~~~~~~~lG~AAT~SAv~-~Q~~LPK~~~~~lL~l~e~~~~~Gv~VAHSGt----mlGli~D~ 264 (293)
T COG4542 202 VEKALKVGDPKLLGEAATLSAVK-NQDRLPKPGLNELLRLVEETCAIGVIVAHSGT----MLGLIYDR 264 (293)
T ss_pred HHHHHCCCCHHHHHHHHHHHHHH-HCCCCCCHHHHHHHHHHHHHCCCCEEEECCCC----EEEEEECC
T ss_conf 99987238988987888899886-32016832389999999873654458841674----67765403