HHsearch alignment for GI: 254781018 and conserved domain: PRK03926
>PRK03926 mevalonate kinase; Provisional.
Probab=100.00 E-value=0 Score=368.08 Aligned_cols=288 Identities=23% Similarity=0.279 Sum_probs=231.1
Q ss_pred EEEECCCEEEEECCCEEECCCEEEEEEECCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 89985817999744544079548998766727999998489829999557666753210012333343321111122103
Q gi|254781018|r 11 AHSIAPAKVILSGEYSSLYGASALAVAITFYLRALLTTIEPSLIRIINSQTIEYSFEACRLLGHQIDQRHRDFIAKKIPI 90 (337)
Q Consensus 11 ~~~~APGKi~L~GEh~v~~G~~ai~~aI~~~~~v~i~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (337)
T Consensus 3 i~asAPGrv~LiGEH~v~~G~~aia~AI~~~~~v~~~~~~d~i-~~~~~-~~------------~-~~~~~--------- 58 (302)
T PRK03926 3 VLCSAPGKIYLFGEHAVVYGKPAIACAIDLRTRVRAELNDDSI-YIQSD-YG------------K-TGEVH--------- 58 (302)
T ss_pred EEEEECEEEEEEECCEEECCCEEEEEEECCCEEEEEEECCCEE-EEECC-CC------------C-CCCHH---------
T ss_conf 9998078999993876986960899993781999999989906-99754-77------------6-54200---------
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC
Q ss_conf 34777888999998751156678876999980554103898530378999999999818775402589999998641157
Q gi|254781018|r 91 TSVLTHPNDLILYIFNRHLPHISCGISLDLHSTIPIGSGFGSSSAIISALSLALSSITHQPFCNKEKLIAETGYIERLQH 170 (337)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~g~~i~i~s~iP~~~GLGSSaA~~va~~~al~~~~~~~~~~~~~~~~~a~~~e~~~~ 170 (337)
T Consensus 59 ----~~~~~~l~~~~-~--~~~~~G~~i~I~S~iP~gaGLgSSAAl~va~~~al~~~~g~~ls-~~~la~la~~~E~~~~ 130 (302)
T PRK03926 59 ----PYVRAAIEKVR-E--EADKDGVDLSITSQIPVGSGLGSSAAVTVATIGALNKLLGLGLS-LEEIAKMGHEVELLVQ 130 (302)
T ss_pred ----HHHHHHHHHHH-H--HCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC-HHHHHHHHHHHHHHHC
T ss_conf ----79999999999-7--56899837999656887778763899999999999985489989-9999999999998746
Q ss_pred CCCCCHHHHHHHHCCCEEEECCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCC-----HHHHHHHHHHHHHHH
Q ss_conf 787734578765326302402785200147884399974971453799999999764120-----689998765489999
Q gi|254781018|r 171 GKTGIIDSTTIVMGGIIYINPPQIIKNETLVGEWWAINTGMPESSTGECVSFVEQHFSQS-----SIWSEFNAVTNEMME 245 (337)
Q Consensus 171 ~~~sg~D~~~~~~gg~~~~~~~~~~~~~~~~~~~~~i~~~~~~~st~~~~~~~~~~~~~~-----~~~~~~~~i~~~~~~ 245 (337)
T Consensus 131 G~~sGiD~~~s~~Gg~~~~~~~~~l--~~~-~~~l~l~~tg~~~~t~~~v~~v~~~~~~~~~~~~~~~~~~~~i~~~a~~ 207 (302)
T PRK03926 131 GAASPTDTYVSTIGGFVTIPDRKKL--PFM-DCGIVVGYTGSSGSTKELVANVRKLYEEYPELIEPILESIGKLSEKAEE 207 (302)
T ss_pred CCCCHHHHHHHHCCCEEEECCCCCC--CCC-CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 8997889999975998996678977--778-9788999839746599999999999876699999999999999999998
Q ss_pred HHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC-EEEECCCCCCCCCEEEEEEEECCCHHHHH---HHCC
Q ss_conf 9983872168999999599999718997799999999985798-08950788678850899998579979999---7459
Q gi|254781018|r 246 NIQKKDAEKTYKSVRVNQSLLESIGVVPETVGKFIRCIENNGG-SAKIAGAGSIRGEKAGLVLVGGYNPEKLS---SLYG 321 (337)
Q Consensus 246 al~~~d~~~l~~~~~~~~~ll~~l~vs~~~l~~l~~~~~~~g~-~ak~sGAG~~~Gg~~~~~l~~~~~~~~~~---~~~~ 321 (337)
T Consensus 208 ~l~~~d~~~lG~Lm~~~h~ll~~lgVS~peld~lv~~a~~~GalGAKltGaG---~GGc~iaL~~~d~~~~v~~al~~ag 284 (302)
T PRK03926 208 LVLSGDYVSIGELMNINQGLLDALGVSTKELSELVYAARTAGAFGAKITGAG---GGGCMVALTAPDKCREVATAIGIAG 284 (302)
T ss_pred HHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEECCCC---CCCEEEEEECCCCHHHHHHHHHHCC
T ss_conf 7765649999999999688787316898899999999996798288805898---7628999946131999999999769
Q ss_pred CEEEEEEECCCCEEE
Q ss_conf 869999987997092
Q gi|254781018|r 322 YTCYKIKEDKNGTML 336 (337)
Q Consensus 322 ~~~~~~~~~~~G~~i 336 (337)
T Consensus 285 ~~~~~~~~~~~g~~~ 299 (302)
T PRK03926 285 GKPMITKPTEEGLRI 299 (302)
T ss_pred CEEEEEEECCCCEEE
T ss_conf 968995677982375