HHsearch alignment for GI: 254781018 and conserved domain: PRK04648
>PRK04648 consensus.
Probab=99.76 E-value=2.8e-16 Score=121.32 Aligned_cols=232 Identities=14% Similarity=0.102 Sum_probs=149.3
Q ss_pred CEEE-ECCCEEEEE----CCCEE-ECCCEEEEEEECCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 0899-858179997----44544-07954899876672799999848982999955766675321001233334332111
Q gi|254781018|r 10 HAHS-IAPAKVILS----GEYSS-LYGASALAVAITFYLRALLTTIEPSLIRIINSQTIEYSFEACRLLGHQIDQRHRDF 83 (337)
Q Consensus 10 ~~~~-~APGKi~L~----GEh~v-~~G~~ai~~aI~~~~~v~i~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (337)
T Consensus 13 ~~~~~~APAKINL~L~V~gkr~DGYH~l~Sl~~~idl~D~l~i~~~~~~~~~~~~~~~~~-------i----~~~----- 76 (295)
T PRK04648 13 DWSAWPAPAKLNLFLQITGRRADGYHLLQTVFRLLDWGDTIHLRVRSDGQIHRIGESLPG-------V----AED----- 76 (295)
T ss_pred CEEECCCCCEEECCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEECCCCCEEEECCCCCC-------C----CCC-----
T ss_conf 830445621370251328879999872568999837880999998899947993688888-------9----997-----
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
Q ss_conf 11221033477788899999875115667887699998055410389853037899999999981877540258999999
Q gi|254781018|r 84 IAKKIPITSVLTHPNDLILYIFNRHLPHISCGISLDLHSTIPIGSGFGSSSAIISALSLALSSITHQPFCNKEKLIAETG 163 (337)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~i~s~iP~~~GLGSSaA~~va~~~al~~~~~~~~~~~~~~~~~a~ 163 (337)
T Consensus 77 ---~Nlv~ka--------~~~l-~~~~~~~~~~~I~l~K~IPvgAGLGGGSSnAAa~L~~Ln~~~~l~ls~-~~L~~ia~ 143 (295)
T PRK04648 77 ---DDLVVRA--------ARLL-QSAAGTALGAEIRVDKRIPAGGGFGGGSSDAATVLVALNALWGLGLDV-DTLAELGL 143 (295)
T ss_pred ---CHHHHHH--------HHHH-HHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCH-HHHHHHHH
T ss_conf ---7499999--------9999-996599987499998068667567765468999999999985899998-99999999
Q ss_pred HHHHCCCCCCCCHHHHHHHHCCCEEEEC-CCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH
Q ss_conf 8641157787734578765326302402-785200147884399974971453799999999764120689998765489
Q gi|254781018|r 164 YIERLQHGKTGIIDSTTIVMGGIIYINP-PQIIKNETLVGEWWAINTGMPESSTGECVSFVEQHFSQSSIWSEFNAVTNE 242 (337)
Q Consensus 164 ~~e~~~~~~~sg~D~~~~~~gg~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~st~~~~~~~~~~~~~~~~~~~~~~i~~~ 242 (337)
T Consensus 144 ~l---------GaDVPffl~~~~a~~~G~GE~l~~~~~~~~~~lLv~P~~~vST~~vy~~~~~~~~~--~~~~~---~~~ 209 (295)
T PRK04648 144 RL---------GADVPVFVRGHNAWAEGVGEQLTPISLPEAAYLLVDPGVHVPTPVLFRSQELTRDA--APAKI---ADF 209 (295)
T ss_pred HH---------CCCCEEEEECCCEEEEECCCEEEECCCCCCEEEEECCCCCCCHHHHHHCCCCCCCC--CCCCH---HHH
T ss_conf 64---------89931587477689996783635867788579998899996659997383445666--64556---777
Q ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEECCCCCC
Q ss_conf 99999838721689999995999997189977999999999857980895078867
Q gi|254781018|r 243 MMENIQKKDAEKTYKSVRVNQSLLESIGVVPETVGKFIRCIENNGGSAKIAGAGSI 298 (337)
Q Consensus 243 ~~~al~~~d~~~l~~~~~~~~~ll~~l~vs~~~l~~l~~~~~~~g~~ak~sGAG~~ 298 (337)
T Consensus 210 ~~~~~~~NdlE~~~---------~-~---~~P~I~~i~~~L~~~g~-a~MSGSGSt 251 (295)
T PRK04648 210 ASGSLLDNAFEPVL---------R-R---REPAVEAVFQALSRVGT-PRLTGSGSG 251 (295)
T ss_pred HHCCHHHCHHHHHH---------H-H---CCHHHHHHHHHHHCCCC-CCEEEECCC
T ss_conf 62843118168999---------8-6---28899999999860598-657953521