HHsearch alignment for GI: 254781018 and conserved domain: PTZ00299
>PTZ00299 homoserine kinase; Provisional.
Probab=99.87 E-value=2.4e-20 Score=146.99 Aligned_cols=281 Identities=16% Similarity=0.160 Sum_probs=183.8
Q ss_pred EEEECCCEEEEECCCEEECCCEEEEEEECCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 89985817999744544079548998766727999998489829999557666753210012333343321111122103
Q gi|254781018|r 11 AHSIAPAKVILSGEYSSLYGASALAVAITFYLRALLTTIEPSLIRIINSQTIEYSFEACRLLGHQIDQRHRDFIAKKIPI 90 (337)
Q Consensus 11 ~~~~APGKi~L~GEh~v~~G~~ai~~aI~~~~~v~i~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (337)
T Consensus 8 V~V~VPATsANLGp-----GFD~LGlAL~ly~ev~v~~~~~~~i~i~g~g~~~----------ip~d~~--------Nlv 64 (336)
T PTZ00299 8 VVLRVPATTANIGP-----AYDTLGMALSIFMELTVEHADAFSMTVEGEGSEH----------ISTDED--------NMV 64 (336)
T ss_pred EEEEECCCHHHCCC-----CHHHHHHHCCCCCEEEEEECCCCEEEEEECCCCC----------CCCCCC--------CHH
T ss_conf 99996744464452-----3675253036774899998897179997067777----------999961--------149
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC--CHHHHHHHHHHHHHC
Q ss_conf 347778889999987511566788769999805541038985303789999999998187754--025899999986411
Q gi|254781018|r 91 TSVLTHPNDLILYIFNRHLPHISCGISLDLHSTIPIGSGFGSSSAIISALSLALSSITHQPFC--NKEKLIAETGYIERL 168 (337)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~g~~i~i~s~iP~~~GLGSSaA~~va~~~al~~~~~~~~~--~~~~~~~~a~~~e~~ 168 (337)
T Consensus 65 -------~~a~~~~~~~~~~~~~~~~~i~i~~~IP~~rGLGSSAaAiVaG~~aan~L~g~~l~~~~~~~ll~~a~~~E-- 135 (336)
T PTZ00299 65 -------VQACRLAFEEYAHKSMPPLKFIMHSNIPYGCGCGSSSAAAVAGFVAGMKLCGLTMETENEEALLQAIAKFE-- 135 (336)
T ss_pred -------HHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHC--
T ss_conf -------99999999985697889638998368887667513889999999999986268877558999999876216--
Q ss_pred CCCCCCCHHHHHHHHCCCEEEECCC---CC--CCCCCCCCEEEEECCC--CCCCHHHHHHHHHHHHCCCHHHHHHHHHHH
Q ss_conf 5778773457876532630240278---52--0014788439997497--145379999999976412068999876548
Q gi|254781018|r 169 QHGKTGIIDSTTIVMGGIIYINPPQ---II--KNETLVGEWWAINTGM--PESSTGECVSFVEQHFSQSSIWSEFNAVTN 241 (337)
Q Consensus 169 ~~~~~sg~D~~~~~~gg~~~~~~~~---~~--~~~~~~~~~~~i~~~~--~~~st~~~~~~~~~~~~~~~~~~~~~~i~~ 241 (337)
T Consensus 136 ----gHPDNVAPAllGG~~l~~~~~~~~~~~~~ip~p~~l~~Vv~iP~~~~~lsT~~AR~vLP~~v~~~daV~n~~r~a- 210 (336)
T PTZ00299 136 ----GHPDNAAPAIYGGIQLVYKKDNGRFLTYRVPTPPNLSVVLFVPHNKMKANTHVTRNLIPTSVSLEDAVFNISRTS- 210 (336)
T ss_pred ----CCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCEEEEEECCCCCEECHHHHHHHCCCCCCHHHHHHHHHHHH-
T ss_conf ----897455432458869999728982799977999884899997897633068999965867688999999999999-
Q ss_pred HHHHHHHCCCCHHHHHHH--HHHHHHHHHCCCCCHHHHHHHHHHHHCCC-EEEECCCCCCCCCEEEEEEEEC--------
Q ss_conf 999999838721689999--99599999718997799999999985798-0895078867885089999857--------
Q gi|254781018|r 242 EMMENIQKKDAEKTYKSV--RVNQSLLESIGVVPETVGKFIRCIENNGG-SAKIAGAGSIRGEKAGLVLVGG-------- 310 (337)
Q Consensus 242 ~~~~al~~~d~~~l~~~~--~~~~~ll~~l~vs~~~l~~l~~~~~~~g~-~ak~sGAG~~~Gg~~~~~l~~~-------- 310 (337)
T Consensus 211 ~lv~al~~~d~~ll~-~~~D~ihepyR~~--~LiP~~~~v~~~a~~aGA~g~~iSGAGPT-----i~Al~~g~~~~~~~~ 282 (336)
T PTZ00299 211 ILVLALSTGDLRMLK-SCSDKLHEQQRSD--ALFPHFRPCVKAAREAGAHYAFLSGAGPS-----VCALVGGRHGDPLTQ 282 (336)
T ss_pred HHHHHHHCCCHHHHH-HCCCEEECCCHHH--HCCCCHHHHHHHHHHCCCEEEEEECHHHH-----HHEEECCCCCCCCCC
T ss_conf 999999549898997-4873486520233--22627999999998789949999764222-----442621556653224
Q ss_pred -CCH---HHHH----H---H--CCCEEEEEEECCCCEEE
Q ss_conf -997---9999----7---4--59869999987997092
Q gi|254781018|r 311 -YNP---EKLS----S---L--YGYTCYKIKEDKNGTML 336 (337)
Q Consensus 311 -~~~---~~~~----~---~--~~~~~~~~~~~~~G~~i 336 (337)
T Consensus 283 ~~~~~~a~~V~~aM~~a~~~~gi~~~~~i~~~~~~G~~v 321 (336)
T PTZ00299 283 PREERKAESVAEAMIKAAEAVGVAGRVIITQPSDQGVHL 321 (336)
T ss_pred CCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEE
T ss_conf 410345999999999999986984589993467788789