HHsearch alignment for GI: 254781018 and conserved domain: TIGR00144
>TIGR00144 beta_RFAP_syn beta-ribofuranosylaminobenzene 5'-phosphate synthase family; InterPro: IPR004422 This protein family contains several archaeal examples of beta-ribofuranosylaminobenzene 5-prime-phosphate synthase (beta-RFAP synthase), an enzyme involved in methanopterin biosynthesis . In some species, two members of this family are found. It is unclear whether both act as beta-RFAP synthase. This family is related to the GHMP kinases (Galactokinase, Homoserine kinase, Mevalonate kinase, Phosphomevalonate kinase). Members are found so far only in the Archaea and in Methylobacterium extorquens.They have an amino-terminal domain probably related to ATP binding..
Probab=95.40 E-value=0.19 Score=27.83 Aligned_cols=178 Identities=15% Similarity=0.212 Sum_probs=103.0
Q ss_pred CCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCEEEECC
Q ss_conf 88769999805541038985303789999999998187754025899999986411577877345787653263024027
Q gi|254781018|r 113 SCGISLDLHSTIPIGSGFGSSSAIISALSLALSSITHQPFCNKEKLIAETGYIERLQHGKTGIIDSTTIVMGGIIYINPP 192 (337)
Q Consensus 113 ~~g~~i~i~s~iP~~~GLGSSaA~~va~~~al~~~~~~~~~~~~~~~~~a~~~e~~~~~~~sg~D~~~~~~gg~~~~~~~ 192 (337)
T Consensus 84 d~~~~~~~~~~~~~~~glg~g~~~~l~~~~~~~~~~~~~~~~~~----~~~~~---g~gg~~g~g~~~~~~gg~~~d~g~ 156 (337)
T TIGR00144 84 DEGFDLEVLSLFPAHSGLGSGTQLSLAVGRLVSELYGLELTARE----LAEIV---GRGGTSGIGVAAFEDGGFLVDGGH 156 (337)
T ss_pred CCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHH----HHHHH---CCCCCCCCCEEEECCCCEEEECCC
T ss_conf 65511687530320014566512467788888887324310455----66653---277754330122215752664565
Q ss_pred -----------------------CCCCCCCCCCCEEE-EECCCC--CCCHHHHHHHHHH-HHCCCHHHHHHHH-HHHHHH
Q ss_conf -----------------------85200147884399-974971--4537999999997-6412068999876-548999
Q gi|254781018|r 193 -----------------------QIIKNETLVGEWWA-INTGMP--ESSTGECVSFVEQ-HFSQSSIWSEFNA-VTNEMM 244 (337)
Q Consensus 193 -----------------------~~~~~~~~~~~~~~-i~~~~~--~~st~~~~~~~~~-~~~~~~~~~~~~~-i~~~~~ 244 (337)
T Consensus 157 ~~g~g~~~~~~~p~~~~~g~~p~p~~~~~d~p~~w~~~~~~p~~~~~~~g~~~~~~~~~~cp~pl~~~~~~~~~~l~~~~ 236 (337)
T TIGR00144 157 STGKGKEKEDFLPSSASKGAKPAPVIARLDFPEDWNVILAIPELDRGVFGKREVNLFQKYCPVPLEDVEKLCHLILMKML 236 (337)
T ss_pred CCCCCCCCHHCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf 44666430002553212567765312212577454158873132111244113344554258766788999999998765
Q ss_pred HHHHCCCCHHHHHHHHHHHHH-HHH--CCCCCHHHHHHHHHHHHCCC-EEEECCCCC
Q ss_conf 999838721689999995999-997--18997799999999985798-089507886
Q gi|254781018|r 245 ENIQKKDAEKTYKSVRVNQSL-LES--IGVVPETVGKFIRCIENNGG-SAKIAGAGS 297 (337)
Q Consensus 245 ~al~~~d~~~l~~~~~~~~~l-l~~--l~vs~~~l~~l~~~~~~~g~-~ak~sGAG~ 297 (337)
T Consensus 237 p~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~gp 293 (337)
T TIGR00144 237 PAVVEGDLDDFGEALNKLQGLGFKKVELELQGPLIKGLIDLLDKDGAPGAGLSSFGP 293 (337)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 566630156777888777631302344555335788888765414753134222475