HHsearch alignment for GI: 254781018 and conserved domain: TIGR00144

>TIGR00144 beta_RFAP_syn beta-ribofuranosylaminobenzene 5'-phosphate synthase family; InterPro: IPR004422 This protein family contains several archaeal examples of beta-ribofuranosylaminobenzene 5-prime-phosphate synthase (beta-RFAP synthase), an enzyme involved in methanopterin biosynthesis . In some species, two members of this family are found. It is unclear whether both act as beta-RFAP synthase. This family is related to the GHMP kinases (Galactokinase, Homoserine kinase, Mevalonate kinase, Phosphomevalonate kinase). Members are found so far only in the Archaea and in Methylobacterium extorquens.They have an amino-terminal domain probably related to ATP binding..
Probab=95.40  E-value=0.19  Score=27.83  Aligned_cols=178  Identities=15%  Similarity=0.212  Sum_probs=103.0

Q ss_pred             CCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCEEEECC
Q ss_conf             88769999805541038985303789999999998187754025899999986411577877345787653263024027
Q gi|254781018|r  113 SCGISLDLHSTIPIGSGFGSSSAIISALSLALSSITHQPFCNKEKLIAETGYIERLQHGKTGIIDSTTIVMGGIIYINPP  192 (337)
Q Consensus       113 ~~g~~i~i~s~iP~~~GLGSSaA~~va~~~al~~~~~~~~~~~~~~~~~a~~~e~~~~~~~sg~D~~~~~~gg~~~~~~~  192 (337)
T Consensus        84 d~~~~~~~~~~~~~~~glg~g~~~~l~~~~~~~~~~~~~~~~~~----~~~~~---g~gg~~g~g~~~~~~gg~~~d~g~  156 (337)
T TIGR00144        84 DEGFDLEVLSLFPAHSGLGSGTQLSLAVGRLVSELYGLELTARE----LAEIV---GRGGTSGIGVAAFEDGGFLVDGGH  156 (337)
T ss_pred             CCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHH----HHHHH---CCCCCCCCCEEEECCCCEEEECCC
T ss_conf             65511687530320014566512467788888887324310455----66653---277754330122215752664565


Q ss_pred             -----------------------CCCCCCCCCCCEEE-EECCCC--CCCHHHHHHHHHH-HHCCCHHHHHHHH-HHHHHH
Q ss_conf             -----------------------85200147884399-974971--4537999999997-6412068999876-548999
Q gi|254781018|r  193 -----------------------QIIKNETLVGEWWA-INTGMP--ESSTGECVSFVEQ-HFSQSSIWSEFNA-VTNEMM  244 (337)
Q Consensus       193 -----------------------~~~~~~~~~~~~~~-i~~~~~--~~st~~~~~~~~~-~~~~~~~~~~~~~-i~~~~~  244 (337)
T Consensus       157 ~~g~g~~~~~~~p~~~~~g~~p~p~~~~~d~p~~w~~~~~~p~~~~~~~g~~~~~~~~~~cp~pl~~~~~~~~~~l~~~~  236 (337)
T TIGR00144       157 STGKGKEKEDFLPSSASKGAKPAPVIARLDFPEDWNVILAIPELDRGVFGKREVNLFQKYCPVPLEDVEKLCHLILMKML  236 (337)
T ss_pred             CCCCCCCCHHCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf             44666430002553212567765312212577454158873132111244113344554258766788999999998765


Q ss_pred             HHHHCCCCHHHHHHHHHHHHH-HHH--CCCCCHHHHHHHHHHHHCCC-EEEECCCCC
Q ss_conf             999838721689999995999-997--18997799999999985798-089507886
Q gi|254781018|r  245 ENIQKKDAEKTYKSVRVNQSL-LES--IGVVPETVGKFIRCIENNGG-SAKIAGAGS  297 (337)
Q Consensus       245 ~al~~~d~~~l~~~~~~~~~l-l~~--l~vs~~~l~~l~~~~~~~g~-~ak~sGAG~  297 (337)
T Consensus       237 p~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~gp  293 (337)
T TIGR00144       237 PAVVEGDLDDFGEALNKLQGLGFKKVELELQGPLIKGLIDLLDKDGAPGAGLSSFGP  293 (337)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf             566630156777888777631302344555335788888765414753134222475