HHsearch results for GI: 254781018 and protein with PDBid: 2gs8_A
>2gs8_A Mevalonate pyrophosphate decarboxylase; structural genomics, PSI, protein structure initiative; HET: MSE; 1.50A {Streptococcus pyogenes m1 gas}
Probab=99.80 E-value=2.2e-15 Score=114.30 Aligned_cols=271 Identities=13% Similarity=0.094 Sum_probs=167.7
Q ss_pred CEEEECCCEEEEECCCEEECCC----------EEEEEEE-CCCEEEEEEECCCCE--EEEEECCCCCCCCCCCCCCCCCC
Q ss_conf 0899858179997445440795----------4899876-672799999848982--99995576667532100123333
Q gi|254781018|r 10 HAHSIAPAKVILSGEYSSLYGA----------SALAVAI-TFYLRALLTTIEPSL--IRIINSQTIEYSFEACRLLGHQI 76 (337)
Q Consensus 10 ~~~~~APGKi~L~GEh~v~~G~----------~ai~~aI-~~~~~v~i~~~~~~~--~~~~s~~~~~~~~~~~~~~~~~~ 76 (337)
.+++.||-.|=|. -|+|. +.|++++ +.+|+.+++..++.. .++.-+
T Consensus 8 ~vt~~a~~NIAli----KYWGK~d~~~~lP~n~SiS~TL~~~~T~T~v~~~~~~~~~d~~~~n----------------- 66 (317)
T 2gs8_A 8 VITVTSYANIAII----KYWGKENQAKMIPSTSSISLTLENMFTTTSVSFLPDTATSDQFYIN----------------- 66 (317)
T ss_dssp EEEEEEEEEEEEE----CCCCEEETTTTEESSCEEEEEEEEEEEEEEEEECCTTCCSCEEEET-----------------
T ss_pred CEEEEECCCEEEE----ECCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCEEEEEC-----------------
T ss_conf 3899932618888----3057568888789998251696789868999983588885399999-----------------
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHH
Q ss_conf 43321111122103347778889999987511566788769999805541038985303789999999998187754025
Q gi|254781018|r 77 DQRHRDFIAKKIPITSVLTHPNDLILYIFNRHLPHISCGISLDLHSTIPIGSGFGSSSAIISALSLALSSITHQPFCNKE 156 (337)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~i~s~iP~~~GLGSSaA~~va~~~al~~~~~~~~~~~~ 156 (337)
...... .....+...+++........++|.+..++|.++|||||||..+|++.+++.+++.+++ .+
T Consensus 67 ---------g~~~~~----~~~~~~~~~~~~~~~~~~~~~~I~s~n~~P~aaGLaSSAs~~aA~~~a~~~~~~~~l~-~~ 132 (317)
T 2gs8_A 67 ---------GILQND----EEHTKISAIIDQFRQPGQAFVKMETQNNMPTAAGLSSSSSGLSALVKACDQLFDTQLD-QK 132 (317)
T ss_dssp ---------TEECCH----HHHHHHHHHHTTTCCTTCCCEEEEEECCSCGGGCCCHHHHHHHHHHHHHHHHHTCCCC-HH
T ss_pred ---------CEECCC----HHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC-HH
T ss_conf ---------987780----6788999999862431366089999725753100000688999999999997378888-89
Q ss_pred HHHHHHHHHHHCCCCCCCCHHHHHHHHCCCEEEECCCCC--CCCCCCCCE--EEEEC--CCCCCCHHHHHHHHHHHHCCC
Q ss_conf 899999986411577877345787653263024027852--001478843--99974--971453799999999764120
Q gi|254781018|r 157 KLIAETGYIERLQHGKTGIIDSTTIVMGGIIYINPPQII--KNETLVGEW--WAINT--GMPESSTGECVSFVEQHFSQS 230 (337)
Q Consensus 157 ~~~~~a~~~e~~~~~~~sg~D~~~~~~gg~~~~~~~~~~--~~~~~~~~~--~~i~~--~~~~~st~~~~~~~~~~~~~~ 230 (337)
++..+|...+ | +.+.|+|||++........ .....+... +++.. .+...||..+...+.......
T Consensus 133 ~ls~lAr~gs--------G-Sa~rSi~GG~v~w~~~~~~~~~~~~~~~~~~~i~~v~~~~k~v~St~~~~~~~~~s~~~~ 203 (317)
T 2gs8_A 133 ALAQKAKFAS--------G-SSSRSFFGPVAAWDKDSGAIYKVETDLKMAMIMLVLNAAKKPISSREGMKLCRDTSTTFD 203 (317)
T ss_dssp HHHHHHHHHH--------G-GGGGGGSCSEEEECTTTCCEEECCCCCCEEEEEEECCCSSCCSCHHHHHHHHHHHCTTHH
T ss_pred HHHHHHHHCC--------C-CCCCHHHCCEEEEECCCCCEEECCCCCCHHEEEEEEECCCCCCCCHHHHHHHHCCCHHHH
T ss_conf 9999997528--------7-705143188689951898502147897333699997236766654076886520202578
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH-----C-C--CCCHHHH---HHHHHHHHCCC-EEEECCCCCC
Q ss_conf 68999876548999999838721689999995999997-----1-8--9977999---99999985798-0895078867
Q gi|254781018|r 231 SIWSEFNAVTNEMMENIQKKDAEKTYKSVRVNQSLLES-----I-G--VVPETVG---KFIRCIENNGG-SAKIAGAGSI 298 (337)
Q Consensus 231 ~~~~~~~~i~~~~~~al~~~d~~~l~~~~~~~~~ll~~-----l-~--vs~~~l~---~l~~~~~~~g~-~ak~sGAG~~ 298 (337)
..+.........+..+++++|++.+++.+..+-..+.. + . .-+|... ++++.+++.|. ++-.+|||++
T Consensus 204 ~~~~~~~~~~~~~~~al~~~D~~~l~~~~e~d~~~lHa~~~~~~pp~~~~~~~t~~vi~~i~~~r~~G~~~~~t~dAGPn 283 (317)
T 2gs8_A 204 QWVEQSAIDYQHMLTYLKTNNFEKVGQLTEANALAMHATTKTANPPFSYLTKESYQAMEAVKELRQEGFACYFTMDAGPN 283 (317)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTSSSCCCSCCHHHHHHHHHHHHHHHTTCCEEEECCSSSC
T ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHCCCCEEEEECCCCC
T ss_conf 88987436799999999879999999999999999999998359972421825999999999999689829999268826
Q ss_pred CCCEEEEEEEECCCHHHHHHH--CCCEEEEEEE
Q ss_conf 885089999857997999974--5986999998
Q gi|254781018|r 299 RGEKAGLVLVGGYNPEKLSSL--YGYTCYKIKE 329 (337)
Q Consensus 299 ~Gg~~~~~l~~~~~~~~~~~~--~~~~~~~~~~ 329 (337)
.+++....+.+++.+. ..|+++..++
T Consensus 284 -----V~~l~~~~~~~~i~~~l~~~~~~i~~~~ 311 (317)
T 2gs8_A 284 -----VKVLCLEKDLAQLAERLGKNYRIIVSKT 311 (317)
T ss_dssp -----EEEEEEGGGHHHHHHHHHTTSEEEEEEB
T ss_pred -----EEEEECHHHHHHHHHHHHHHCCEEEECC
T ss_conf -----7999736029999999976136998168