HHSEARCH alignment of GI: 254781018 and SCOP domain: d1k47a2

Alignment
>d1k47a2 d.58.26.4 (A:195-329) Phosphomevalonate kinase (PMK) {Streptococcus pneumoniae r6 [TaxId: 171101]}
Probab=99.62  E-value=1.9e-15  Score=113.22  Aligned_cols=106  Identities=17%  Similarity=0.244  Sum_probs=87.2

Q ss_pred             CCEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC--CCCHHHHHH
Q ss_conf             843999749714537999999997641206899987654899999983872168999999599999718--997799999
Q gi|254781018|r  202 GEWWAINTGMPESSTGECVSFVEQHFSQSSIWSEFNAVTNEMMENIQKKDAEKTYKSVRVNQSLLESIG--VVPETVGKF  279 (337)
Q Consensus       202 ~~~~~i~~~~~~~st~~~~~~~~~~~~~~~~~~~~~~i~~~~~~al~~~d~~~l~~~~~~~~~ll~~l~--vs~~~l~~l  279 (337)
                      +..+++..++...+|.+++..+++.. ...+++++..+++++.++|+++|++.++++|++||.+++.++  +++|+++.|
T Consensus         5 ~~~lll~~TG~~~sT~~lv~~v~~~~-~~~~l~~~~~~v~~~~~al~~~d~~~l~~~m~~~~~ll~~l~~~i~~~~l~~l   83 (135)
T d1k47a2           5 ECDFLVGWTKEVAVSSHMVQQIKQNI-NQNFLTSSKETVVSLVEALEQGKSEKIIEQVEVASKLLEGLSTDIYTPLLRQL   83 (135)
T ss_dssp             CCEEEEEECCCCCCCHHHHHHHHTTC-CHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCTTTSCHHHHHH
T ss_pred             CCEEEEEECCCCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
T ss_conf             86389984499354799999999997-76799999999999999999287799999999999999863556788078999


Q ss_pred             HHHHHHCCCEEEECCCCCCCCCEEEEEEEECC
Q ss_conf             99998579808950788678850899998579
Q gi|254781018|r  280 IRCIENNGGSAKIAGAGSIRGEKAGLVLVGGY  311 (337)
Q Consensus       280 ~~~~~~~g~~ak~sGAG~~~Gg~~~~~l~~~~  311 (337)
                      ++.++++|+++|+||||   ||+|++++..++
T Consensus        84 ~~~a~~~g~~ak~~GaG---gGG~~i~l~~~~  112 (135)
T d1k47a2          84 KEASQDLQAVAKSSGAG---GGDCGIALSFDA  112 (135)
T ss_dssp             HHTTTTSSEEEEECSSC---SSSEEEEEECSH
T ss_pred             HHHHHHHCCCHHCCCCC---CCCEEEEEECCH
T ss_conf             99999706002014676---788589986283


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: GHMP Kinase, C-terminal domain
family: Phosphomevalonate kinase (PMK)
domain: Phosphomevalonate kinase (PMK)
species: Streptococcus pneumoniae r6 [TaxId: 171101]