HHSEARCH alignment of GI: 254781018 and SCOP domain: d1kkha2

Alignment
>d1kkha2 d.58.26.3 (A:181-317) Mevalonate kinase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=99.74  E-value=2.8e-17  Score=124.77  Aligned_cols=122  Identities=20%  Similarity=0.288  Sum_probs=101.4

Q ss_pred             CEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
Q ss_conf             43999749714537999999997641206899987654899999983872168999999599999718997799999999
Q gi|254781018|r  203 EWWAINTGMPESSTGECVSFVEQHFSQSSIWSEFNAVTNEMMENIQKKDAEKTYKSVRVNQSLLESIGVVPETVGKFIRC  282 (337)
Q Consensus       203 ~~~~i~~~~~~~st~~~~~~~~~~~~~~~~~~~~~~i~~~~~~al~~~d~~~l~~~~~~~~~ll~~l~vs~~~l~~l~~~  282 (337)
                      .+++++.+....+|.+++..+++.....+.++++.++++   +||+.+|++.++++|+++|.++++++||+|++|.|++.
T Consensus        12 ~~Lv~~~t~~~~~t~~~v~~v~~~~~~~~i~~~~~~~~~---~al~~~d~~~lg~lm~~~~~~l~~lgvs~~~id~l~~~   88 (137)
T d1kkha2          12 KFLIVYAEKRKKKTAELVNEVAKIENKDEIFKEIDKVID---EALKIKNKEDFGKLMTKNHELLKKLNISTPKLDRIVDI   88 (137)
T ss_dssp             CEEEEEEECCCSCHHHHHHHHHTCTTHHHHHHHHHHHHH---HHHHCCSHHHHHHHHHHHHHHHHTTTCCCHHHHHHHHH
T ss_pred             CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
T ss_conf             879997368334299999999999762299999999999---99982899999999999999998705895899999999


Q ss_pred             HHHCCCEEEECCCCCCCCCEEEEEEEECCCHHHHH-HH--CCCEEEEEEEC
Q ss_conf             98579808950788678850899998579979999-74--59869999987
Q gi|254781018|r  283 IENNGGSAKIAGAGSIRGEKAGLVLVGGYNPEKLS-SL--YGYTCYKIKED  330 (337)
Q Consensus       283 ~~~~g~~ak~sGAG~~~Gg~~~~~l~~~~~~~~~~-~~--~~~~~~~~~~~  330 (337)
                      +++.|+|+|+||||   ||+|++++++.+..+.+. .+  .++++|++++.
T Consensus        89 ~~~~g~GaKitGAG---gGG~~ial~~~~~~~~~~~~l~~~~~~~f~~~~~  136 (137)
T d1kkha2          89 GNRFGFGAKLTGAG---GGGCVIILVNEEKEKELLKELNKEDVRIFNCRMM  136 (137)
T ss_dssp             HHHHSSEEEECSSS---SSEEEEEECCGGGHHHHHHHHHTSSCEEEEECBC
T ss_pred             HHHCCCCCCCCCCC---CCCEEEEEECHHHHHHHHHHHHHCCCHHEEEECC
T ss_conf             98538874201589---9817999857354999999999818301322547


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: GHMP Kinase, C-terminal domain
family: Mevalonate kinase
domain: Mevalonate kinase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]