HHSEARCH alignment of GI: 254781018 and SCOP domain: d1s4ea1

Alignment
>d1s4ea1 d.14.1.5 (A:5-180) Galactokinase {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=99.97  E-value=1.2e-30  Score=208.86  Aligned_cols=160  Identities=15%  Similarity=0.106  Sum_probs=116.7

Q ss_pred             EEECCCEEEEECCCEEECCCEEEEEEECCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf             99858179997445440795489987667279999984898299995576667532100123333433211111221033
Q gi|254781018|r   12 HSIAPAKVILSGEYSSLYGASALAVAITFYLRALLTTIEPSLIRIINSQTIEYSFEACRLLGHQIDQRHRDFIAKKIPIT   91 (337)
Q Consensus        12 ~~~APGKi~L~GEh~v~~G~~ai~~aI~~~~~v~i~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (337)
                      +++|||||+|+|||+||+|++|+++||+++++++++++++..+  .............       +        ......
T Consensus         1 tv~aPgRi~l~GeH~Dy~gg~vl~~AI~~~~~v~~~~~~~~~i--~~~~~~~~~~~~~-------~--------~~~~~~   63 (176)
T d1s4ea1           1 TVKSPGRVNLIGEHTDYTYGYVMPMAIDLYTIITAEKYDKVQL--YSEHFNEEKTFTL-------D--------NLTKEG   63 (176)
T ss_dssp             CEEEEEEEESSCCSCGGGTCEECEEEEEEEEEEC----CCBCC--CBTTTTC-C---C-------C---------CCCCS
T ss_pred             CCCCCEEEEEECCCEEECCCEEEEEEEEEEEEEEEECCCCEEE--EECCCCCCEEEEE-------C--------CCCCCC
T ss_conf             9225789998716813489898858866589999981664378--8425775024651-------0--------332356


Q ss_pred             HHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC
Q ss_conf             47778889999987511566788769999805541038985303789999999998187754025899999986411577
Q gi|254781018|r   92 SVLTHPNDLILYIFNRHLPHISCGISLDLHSTIPIGSGFGSSSAIISALSLALSSITHQPFCNKEKLIAETGYIERLQHG  171 (337)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~g~~i~i~s~iP~~~GLGSSaA~~va~~~al~~~~~~~~~~~~~~~~~a~~~e~~~~~  171 (337)
                      +|..+....+....  .......|+++.++|+||.++|||||||++||++.+++++++.+++ ++++.++|+.+|+.+.|
T Consensus        64 ~~~~~~~~~~~~~~--~~~~~~~g~~i~i~s~iP~gsGLgSSAAl~va~~~al~~~~~~~~~-~~~l~~~a~~~E~~~~g  140 (176)
T d1s4ea1          64 SWIDYVKGVLWVLI--QEGYKIGGLKGKITGDLPLGAGLSSSASFEVGILEVLNQLYNLNID-PLKKALLAKKAENEFVG  140 (176)
T ss_dssp             STHHHHHHHHHHHH--HTTCCCCCBC-CEEESSCTTSSSCHHHHHHHHHHHHHHHHTTCCCC-HHHHHHHHHHHHHHTSC
T ss_pred             CCHHHEEHHHHHHH--HHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC-HHHHHHHHHHHHHHHCC
T ss_conf             62021200123346--6315677848998357456766456078999999999998523699-89999999999887628


Q ss_pred             CCCC-HHHHHHHHCCCEEEEC
Q ss_conf             8773-4578765326302402
Q gi|254781018|r  172 KTGI-IDSTTIVMGGIIYINP  191 (337)
Q Consensus       172 ~~sg-~D~~~~~~gg~~~~~~  191 (337)
                      .+|| |||++++|||...+..
T Consensus       141 ~~~G~~Dq~~~~~gg~~~~~~  161 (176)
T d1s4ea1         141 VPCGILDQFAVVFGKKDNVIF  161 (176)
T ss_dssp             CCCCSHHHHHHHHCCTTEEEE
T ss_pred             CCCCHHHHHHHHHCCCCEEEE
T ss_conf             986548799998568887999


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Ribosomal protein S5 domain 2-like
superfamily: Ribosomal protein S5 domain 2-like
family: GHMP Kinase, N-terminal domain
domain: Galactokinase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]