HHSEARCH alignment of GI: 254781018 and SCOP domain: d1wuua1

Alignment
>d1wuua1 d.14.1.5 (A:2-216) Galactokinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.7e-34  Score=231.10  Aligned_cols=181  Identities=14%  Similarity=0.109  Sum_probs=137.1

Q ss_pred             CCCCCCCCCEEEECCCEEEEECCCEEECCCEEEEEEECCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             54357996089985817999744544079548998766727999998489829999557666753210012333343321
Q gi|254781018|r    2 KQQTSQTPHAHSIAPAKVILSGEYSSLYGASALAVAITFYLRALLTTIEPSLIRIINSQTIEYSFEACRLLGHQIDQRHR   81 (337)
Q Consensus         2 ~~~~~~~p~~~~~APGKi~L~GEh~v~~G~~ai~~aI~~~~~v~i~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~   81 (337)
                      +++|+.+|+++++|||||+|+|||+||+|++|+++||++++++.+++++++.+++.+.....................  
T Consensus        20 ~~~fg~~p~~i~~APGrv~L~GEH~dy~Gg~vl~~Ai~~~~~v~~~~~~d~~i~v~s~~~~~~~~~~~~~~~~~~~~~--   97 (215)
T d1wuua1          20 REEFGAEPELAVSAPGRVNLIGEHTDYNQGLVLPMALELMTVLVGSPRKDGLVSLLTTSEGADEPQRLQFPLPTAQRS--   97 (215)
T ss_dssp             HHHHSSCCSEEEEEEEEEEEECTTCGGGTCEEEEEEEEEEEEEEEEEETTCEEEEEECCSSSCSCSEEEEECCCSSCC--
T ss_pred             HHHHCCCCCEEEECCEEEEEECCCEEECCCEEEEEECCCCEEEEEEECCCCEEEEEECCCCCCCCEEEEECCCCCCCC--
T ss_conf             998699977899855699996588265796677663267389999856998799998667877530785114410122--


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHH
Q ss_conf             11112210334777888999998751156678876999980554103898530378999999999818775402589999
Q gi|254781018|r   82 DFIAKKIPITSVLTHPNDLILYIFNRHLPHISCGISLDLHSTIPIGSGFGSSSAIISALSLALSSITHQPFCNKEKLIAE  161 (337)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~i~s~iP~~~GLGSSaA~~va~~~al~~~~~~~~~~~~~~~~~  161 (337)
                          .......|..+...    ...........|+++.++|+||.++|||||||++||++.+++++++.+++ .+++.++
T Consensus        98 ----~~~~~~~~~~~~~~----~~~~~~~~~~~g~~i~i~S~iP~gaGLgSSAA~~val~~al~~~~~~~~~-~~~la~~  168 (215)
T d1wuua1          98 ----LEPGTPRWANYVKG----VIQYYPAAPLPGFSAVVVSSVPLGGGLSSSASLEVATYTFLQQLCPDSGT-IAARAQV  168 (215)
T ss_dssp             ----CCCCSSGGGHHHHH----HHHHCSSSCCCEEEEEEEECSCTTSSSCHHHHHHHHHHHHHHHHSCCCSC-HHHHHHH
T ss_pred             ----CCCCCCHHHHHHHH----HHHHHCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC-HHHHHHH
T ss_conf             ----34465126666556----67663257888758998257556764265068788889888887402344-7899999


Q ss_pred             HHHHHHCCCCCCCC-HHHHHHHHCCC---EEEECCC
Q ss_conf             99864115778773-45787653263---0240278
Q gi|254781018|r  162 TGYIERLQHGKTGI-IDSTTIVMGGI---IYINPPQ  193 (337)
Q Consensus       162 a~~~e~~~~~~~sg-~D~~~~~~gg~---~~~~~~~  193 (337)
                      ++.+|+.+.|.+|| |||++|+||+.   ++++..+
T Consensus       169 a~~~E~~~~G~~~G~mDq~as~~g~~~~~~~id~~~  204 (215)
T d1wuua1         169 CQQAEHSFAGMPCGIMDQFISLMGQKGHALLIDCRS  204 (215)
T ss_dssp             HHHHHHHHTCCCCCSHHHHHHHHCCTTEEEEEETTT
T ss_pred             HHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEEECCC
T ss_conf             999999760798847899999817788499998799


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Ribosomal protein S5 domain 2-like
superfamily: Ribosomal protein S5 domain 2-like
family: GHMP Kinase, N-terminal domain
domain: Galactokinase
species: Human (Homo sapiens) [TaxId: 9606]