RPSBLAST alignment of GI: 254781018 and protein with PDBid: 1kkh
>1kkh_A Mevalonate kinase; mixed beta sheet, phosphate-binding loop, beta-alpha-beta, transferase; 2.40A {Methanocaldococcus jannaschii} SCOP: d.14.1.5 d.58.26.3 PDB: 1vis_A Length = 317
Score = 109 bits (273), Expect = 9e-25
Identities = 55/295 (18%), Positives = 107/295 (36%), Gaps = 18/295 (6%)
Query: 9 PHAHSI---APAKVILSGEYSSLYGASALAVAITFYLRALLTTIEPSLIRIINSQTIEYS 65
P + P+KVIL GE++ +YG A+++AI + + I + +
Sbjct: 1 PRGSHMIIETPSKVILFGEHAVVYGYRAISMAIDLTSTIEIKETQEDEIILNLND----- 55
Query: 66 FEACRLLGHQIDQRHRDFIAKKIPITSVLTHPNDLILYIFNRHLPHISCGISLDLHSTIP 125
L + + + I + G +++ S IP
Sbjct: 56 ------LNKSLGLNLNEIKNINPNNFGDFKYCLCAIKNTLDYLNIEPKTGFKINISSKIP 109
Query: 126 IGSGFGSSSAIISALSLALSSITHQPFCNKEKLIAETGYIERLQHGKTGIIDSTTIVMGG 185
I G GSS++I A+S ++ +++ +E+ GK I D++TI G
Sbjct: 110 ISCGLGSSASITIGTIKAVSGFYNKEL-KDDEIAKLGYMVEKEIQGKASITDTSTITYKG 168
Query: 186 IIYINPPQIIKNETLVGEWWAINTGMPESSTGE---CVSFVEQHFSQSSIWSEFNAVTNE 242
I+ I + K + E+ + + V + + F +
Sbjct: 169 ILEIKNNKFRKIKGEFEEFLKNCKFLIVYAEKRKKKTAELVNEVAKIENKDEIFKEIDKV 228
Query: 243 MMENIQKKDAEKTYKSVRVNQSLLESIGVVPETVGKFIRCIENNGGSAKIAGAGS 297
+ E ++ K+ E K + N LL+ + + + + + G AK+ GAG
Sbjct: 229 IDEALKIKNKEDFGKLMTKNHELLKKLNISTPKLDRIVDIGNRFGFGAKLTGAGG 283