HHsearch alignment for GI: 254781019 and conserved domain: COG3424
>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism].
Probab=100.00 E-value=2.8e-33 Score=225.84 Aligned_cols=303 Identities=17% Similarity=0.194 Sum_probs=226.0
Q ss_pred EEEEEEEECCCEEECHHHHHHHC----CC-CHH---H-HHHHCCCCEEEECCCC-----------------CCHHHHHHH
Q ss_conf 06688873489045599999870----99-987---9-7630383246655998-----------------599999999
Q gi|254781019|r 4 GIEDISFYTTNQYLDLSVIAEKY----RL-DVA---K-FYVGIGQERMSVLNPD-----------------EDIVTMAAA 57 (396)
Q Consensus 4 GI~~i~~y~P~~~v~~~~l~~~~----g~-~~~---k-~~~~lGi~~r~v~~~~-----------------Ed~~tmA~~ 57 (396)
T Consensus 3 ~i~sv~t~~Ppy~~~Qse~~d~f~~~~~~~~~~~I~r~l~~~~~i~~R~~v~Pl~~y~e~~~f~ekN~ifie~a~~l~v~ 82 (356)
T COG3424 3 VIASVATALPPYRYNQSEITDSFAELPFQEGREDIPRVLHANAQINRRHLVLPLDWYREPHGFGEKNEIFIEEAVPLGVD 82 (356)
T ss_pred EEEECCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEECCCHHHCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 54000057996435667889999873152226788999865336251212262766417887566303499987999999
Q ss_pred HHHHHHHHCC--HHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECC-CHHHHHHHHHHHHHHHHCCCCCEEE
Q ss_conf 9999997279--578689999457887546005888863202687735898414-2035888998789999739997699
Q gi|254781019|r 58 AALPIMQNQD--KNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQ-ACYSATCALHMACALVAKSPERKVL 134 (396)
Q Consensus 58 Aa~~~L~~~~--~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~-aC~g~~~AL~~A~~~i~sg~~~~aL 134 (396)
T Consensus 83 a~r~aL~~~~l~pedId~vv~vtsTG~-~~Ps~dari~~~Lgl~p~~~Rvpv~glGCaaga~glara~~y~ra~P~~~vl 161 (356)
T COG3424 83 ALRRALDGSPLRPEDIDAVVTVTSTGL-ATPSLDARIVGELGLSPDTRRVPVWGLGCAAGAAGLARARDYCRAAPDANVL 161 (356)
T ss_pred HHHHHHCCCCCCHHHCCEEEEEEECCC-CCCCHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCEEE
T ss_conf 999885269999778867999950255-4787549988613999764052200320142115789999997508665089
Q ss_pred EEECCCCCCCCCCCC--------CCCCCCCEEEEEECCCCCCCEEE-------ECCCCCCCCCCCC--CCCCCCCCEEEC
Q ss_conf 950332014588875--------33478302468842687630353-------1000156786511--275887542356
Q gi|254781019|r 135 IVASDVARYDLGSSG--------EPTQGCGAVAILISSQTSILEIE-------DITGIYTNDCMDF--WRPNYRRTALVD 197 (396)
Q Consensus 135 VV~sD~~~~~~~~~~--------~~t~GaGA~Allv~~~~~~~~~~-------~~~~~~~~~~~df--~rp~~~~~~~~d 197 (396)
T Consensus 162 vV~vELCSLt~~~~d~t~s~lVgtaLF~DG~AA~vv~gd~~~~~~~~~~p~i~~s~StL~~dse~~Mgwdv~d~G~~~vl 241 (356)
T COG3424 162 VVCVELCSLTYVFADDTKSNLVGTALFGDGAAAVVVSGDRRAEGKRPLRPDILDSFSTLYPDSEDIMGWDVGDQGLKVVL 241 (356)
T ss_pred EEEEEEEEEEEECCCCCCCCCEEEEEECCCEEEEEEECCCCCCCCCCCCCEECCCCCCCCCCCCCCCCEEECCCCEEEEE
T ss_conf 99946321554347887545133330048705899834643346678975000454546886210011530488479997
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 60169899999999999999962988211012331145405788888641102454410013455543334445323854
Q gi|254781019|r 198 GKYSTKIYLQSLEAVWHDYQKNKGHDFNDFQYFCYHQPFTRMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNS 277 (396)
Q Consensus 198 g~~~~~~y~~~~~~a~~~~l~~~g~~~~did~~v~H~p~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~ 277 (396)
T Consensus 242 Srdlp~lIe~~l~~~V~~fL~~~~ls~~dI~~w~~HPGG~KVida~~~sLgls~e----------~l~~s~~~L~~~GNM 311 (356)
T COG3424 242 SRDLPNLIESYLAPNVTTFLATHGLSIEDIEAWVVHPGGPKVIDAYEESLGLSPE----------ALELSWDVLREYGNM 311 (356)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCEEEECCCCCHHHHHHHHHCCCCHH----------HHHHHHHHHHHHCCC
T ss_conf 5732689999852558999997687665411155579970699999876189988----------999999999982786
Q ss_pred CCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEEEEE
Q ss_conf 323389999999971574369888999840798303778778
Q gi|254781019|r 278 YTASLYIALISLLDHSSENLAGKRVGFFSYGSGCVAEFFSGI 319 (396)
Q Consensus 278 ~SASi~l~L~slLe~~~~~~~G~rIll~syGsG~~a~~f~~~ 319 (396)
T Consensus 312 SSatvLfVL~d~l~~~--~~~g~~Gl~~A~GPGf~sElvL~~ 351 (356)
T COG3424 312 SSATVLFVLEDTLQKA--PKSGSRGLMFAMGPGFCSELVLLD 351 (356)
T ss_pred CCHHHHHHHHHHHHHC--CCCCCCEEEEECCCCCEEEEEEEE
T ss_conf 5210299999999736--887763034532786322244577