HHsearch alignment for GI: 254781019 and conserved domain: KOG1391
>KOG1391 consensus.
Probab=94.89 E-value=0.083 Score=30.23 Aligned_cols=94 Identities=14% Similarity=0.183 Sum_probs=71.7
Q ss_pred CCHHHHHHHHHHHHHHHC--CHHHCCEEEEECCCCCCCCHHHHHHHHHHHCC----CCCCEEEEECCCHHHHHHHHHHHH
Q ss_conf 599999999999999727--95786899994578875460058888632026----877358984142035888998789
Q gi|254781019|r 49 EDIVTMAAAAALPIMQNQ--DKNLIDTLFFATESSVDQSKSAAIWLHKLLGL----NSSCRVVELKQACYSATCALHMAC 122 (396)
Q Consensus 49 Ed~~tmA~~Aa~~~L~~~--~~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl----~~~~~~~Di~~aC~g~~~AL~~A~ 122 (396)
T Consensus 26 ~~aTdL~~~AakAAL~aa~v~~e~VD~VI~GNV~---aSSsDgIYl~RHvGL~~GvP~e~pALtiNRLCGSGFQsiVNga 102 (396)
T KOG1391 26 LSATDLGVVAAKAALKAANVGAEAVDHVIMGNVL---ASSSDGIYLARHVGLRVGVPKETPALTINRLCGSGFQSIVNGA 102 (396)
T ss_pred CCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEEEE---ECCCCCEEEEECCCCCCCCCCCCCCEEEHHHHCCCHHHHHHHH
T ss_conf 5444678899998886438883233258871134---1257726754003532278676673343013131279898667
Q ss_pred HHHHCCCCCEEEEEECCCCCCCC
Q ss_conf 99973999769995033201458
Q gi|254781019|r 123 ALVAKSPERKVLIVASDVARYDL 145 (396)
Q Consensus 123 ~~i~sg~~~~aLVV~sD~~~~~~ 145 (396)
T Consensus 103 Q~I~vgea~ivL~GGtEnMSq~P 125 (396)
T KOG1391 103 QEICVGEAEIVLCGGTENMSQAP 125 (396)
T ss_pred HHHHCCCCEEEEECCCCCCCCCC
T ss_conf 77630761599844745234586