HHsearch alignment for GI: 254781019 and conserved domain: KOG1394

Probab=97.31  E-value=0.0039  Score=38.52  Aligned_cols=178  Identities=17%  Similarity=0.167  Sum_probs=104.8

Q ss_pred             HHHHHHHHHHHHHHHCCH-----HHCCE----EEEECCCCC---------------------CCCHH-----HHHHHHHH
Q ss_conf             999999999999972795-----78689----999457887---------------------54600-----58888632
Q gi|254781019|r   51 IVTMAAAAALPIMQNQDK-----NLIDT----LFFATESSV---------------------DQSKS-----AAIWLHKL   95 (396)
Q Consensus        51 ~~tmA~~Aa~~~L~~~~~-----~~Id~----li~~T~t~~---------------------~~~~~-----~a~~v~~~   95 (396)
T Consensus        94 ~~~~al~aa~eAL~da~~~~~~~~e~dk~~~GV~iGtgmg~l~~i~e~a~~~~~~g~rrvsPffVPkil~NM~ag~vsm~  173 (440)
T KOG1394          94 FTKLALTAAEEALKDAGLLDVNLSEEDKEKTGVLIGTGMGDLEDIYETAQNLSEKGYRRVSPFFVPKILTNMAAGYVSMK  173 (440)
T ss_pred             HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCHHHHH
T ss_conf             89999999999997368888641245544104585146332999999999998722343386300066503651033453


Q ss_pred             HCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC---------------CCCC---CC-------
Q ss_conf             0268773589841420358889987899997399976999503320145---------------8887---53-------
Q gi|254781019|r   96 LGLNSSCRVVELKQACYSATCALHMACALVAKSPERKVLIVASDVARYD---------------LGSS---GE-------  150 (396)
Q Consensus        96 Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~---------------~~~~---~~-------  150 (396)
T Consensus       174 ~gl~G--pnhsvSTACATg~h~igda~n~Ir~GdaDvmlAGgsE~~I~PlslaGF~r~RALSt~nd~P~~aSRPfD~~Rd  251 (440)
T KOG1394         174 YGLRG--PNHSVSTACATGNHCIGDAFNFIRLGDADVMLAGGSEACINPLSLAGFSRARALSTRNDNPQKASRPFDKKRD  251 (440)
T ss_pred             HCCCC--CCHHHHHHHHHCCCHHHHHHHHHHHCCCCEEECCCCCEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
T ss_conf             15767--7616676665143058888878870765455226753000522234378877764158993103788866777


Q ss_pred             -CCCCCCEEEEEECC-------CCCCCEEEECCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             -34783024688426-------8763035310001567865112758875423566016989999999999999996298
Q gi|254781019|r  151 -PTQGCGAVAILISS-------QTSILEIEDITGIYTNDCMDFWRPNYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGH  222 (396)
Q Consensus       151 -~t~GaGA~Allv~~-------~~~~~~~~~~~~~~~~~~~df~rp~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~  222 (396)
T Consensus       252 GFVmGEGagvlvlEelEHA~~RgA~I~AE~lGygl-s~Da~HiT~P~------~dG~--------Ga~~am~raL~~Agl  316 (440)
T KOG1394         252 GFVMGEGAGVLVLEELEHAKKRGAPIYAEVLGYGL-SSDAYHITSPD------PDGA--------GAVLAMERALKDAGL  316 (440)
T ss_pred             CEEECCCEEEEEHHHHHHHHHCCCCEEHHHHCCCC-CCCCCCCCCCC------CCCC--------HHHHHHHHHHHHCCC
T ss_conf             35650660587618678898749915277645752-56634347899------8730--------589999999987499


Q ss_pred             CHHHCCEEEECCCCCHHHHHHHH
Q ss_conf             82110123311454057888886
Q gi|254781019|r  223 DFNDFQYFCYHQPFTRMAEKAHI  245 (396)
Q Consensus       223 ~~~did~~v~H~p~~k~~~~~~~  245 (396)
T Consensus       317 ~pe~i~YvNAHATST~~GD~aE~  339 (440)
T KOG1394         317 SPEDIDYVNAHATSTPLGDAAEA  339 (440)
T ss_pred             CHHHCCEEECCCCCCCCCHHHHH
T ss_conf             95655705303335767308999