HHsearch alignment for GI: 254781019 and conserved domain: PRK08242

Probab=99.13  E-value=3.3e-08  Score=69.99  Aligned_cols=99  Identities=18%  Similarity=0.153  Sum_probs=83.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHC--CHHHCCEEEEECCCCCC-CCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHH
Q ss_conf             98599999999999999727--95786899994578875-4600588886320268773589841420358889987899
Q gi|254781019|r   47 PDEDIVTMAAAAALPIMQNQ--DKNLIDTLFFATESSVD-QSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACA  123 (396)
Q Consensus        47 ~~Ed~~tmA~~Aa~~~L~~~--~~~~Id~li~~T~t~~~-~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~  123 (396)
T Consensus        24 ~~~~~~~L~a~~i~~~l~r~~i~~~~Id~vi~G~v~~~g~~g~n~aR~~al~aGlp~~vpa~TVnr~C~SGl~Ai~~Aa~  103 (402)
T PRK08242         24 HEVKPVRLAAGLLNALRDRNGLDTAAVDDVVLGCVTPVGDQGADIARTAVLAAGLPETVPGVQINRFCASGLEAVNLAAA  103 (402)
T ss_pred             CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHH
T ss_conf             98989999999999999870989899997999807765544577999999976999888647884505578999999999


Q ss_pred             HHHCCCCCEEEEEECCCCCCCC
Q ss_conf             9973999769995033201458
Q gi|254781019|r  124 LVAKSPERKVLIVASDVARYDL  145 (396)
Q Consensus       124 ~i~sg~~~~aLVV~sD~~~~~~  145 (396)
T Consensus       104 ~I~~G~~dv~iAGGvEsmS~~P  125 (402)
T PRK08242        104 KVRSGWDDLVIAGGVESMSRVP  125 (402)
T ss_pred             HHHCCCCCEEEECCCCCCCCCC
T ss_conf             9966998889976613456575