HHsearch alignment for GI: 254781019 and conserved domain: PRK08963
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed.
Probab=98.69 E-value=4.4e-07 Score=63.01 Aligned_cols=100 Identities=13% Similarity=0.104 Sum_probs=85.9
Q ss_pred CCCCCHHHHHHHHHHHHHHHC--CHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHH
Q ss_conf 998599999999999999727--957868999945788754600588886320268773589841420358889987899
Q gi|254781019|r 46 NPDEDIVTMAAAAALPIMQNQ--DKNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACA 123 (396)
Q Consensus 46 ~~~Ed~~tmA~~Aa~~~L~~~--~~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~ 123 (396)
T Consensus 32 l~~~~~~~L~a~~ik~~l~r~~i~p~~Id~Vi~G~v~~~~~g~n~AR~aaL~aGlp~~vp~~TVnr~C~SGl~Ai~~Aa~ 111 (436)
T PRK08963 32 FHGVPAVDLGKMVVGELLARSEIDPKLIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVSRACATSFQAVANVAE 111 (436)
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHH
T ss_conf 58899899999999999998298989999899983675676772999999975999888626776322356899999999
Q ss_pred HHHCCCCCEEEEEECCCCCCCC
Q ss_conf 9973999769995033201458
Q gi|254781019|r 124 LVAKSPERKVLIVASDVARYDL 145 (396)
Q Consensus 124 ~i~sg~~~~aLVV~sD~~~~~~ 145 (396)
T Consensus 112 ~I~~G~~dvvlaGGvEsMS~~P 133 (436)
T PRK08963 112 SIMAGTIDIGIAGGADSSSVLP 133 (436)
T ss_pred HHHCCCCCEEEEECCCCCCCCC
T ss_conf 9974999789994512246686