HHsearch alignment for GI: 254781019 and conserved domain: TIGR00747
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III; InterPro: IPR004655 Beta-ketoacyl-acyl carrier protein synthase III (FabH), in general, initiates elongation in type II fatty acid synthase systems found in bacteria and plants. It is responsible for producing the multitude of fatty acid structures found in bacterial membranes . The two members of this subfamily from Bacillus subtilis differ from each other, and from FabH from Escherichia coli, in acyl group specificity. Active site residues include Cys112, His244 and Asn274 of Escherichia coli FabH. Cys-112 is the site of acyl group attachment. ; GO: 0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity, 0006633 fatty acid biosynthetic process.
Probab=100.00 E-value=0 Score=442.79 Aligned_cols=298 Identities=21% Similarity=0.221 Sum_probs=257.9
Q ss_pred CCCEEEEEEEECCCEEECHHHHHHHCCCCHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCC--HHHCCEEEEEC
Q ss_conf 9620668887348904559999987099987976303832466559985999999999999997279--57868999945
Q gi|254781019|r 1 MAIGIEDISFYTTNQYLDLSVIAEKYRLDVAKFYVGIGQERMSVLNPDEDIVTMAAAAALPIMQNQD--KNLIDTLFFAT 78 (396)
Q Consensus 1 M~vGI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~~lGi~~r~v~~~~Ed~~tmA~~Aa~~~L~~~~--~~~Id~li~~T 78 (396)
T Consensus 1 ~~~~i~g~G~YlP~~v~tNadL~k~vDTSDEWI~TRTGI~eRRiAad~E~~S~mg~~AA~~Aie~A~i~~~dID~iivaT 80 (329)
T TIGR00747 1 MKAKILGTGSYLPEKVLTNADLEKMVDTSDEWIVTRTGIKERRIAADDETSSHMGFEAAKKAIENAGISKDDIDLIIVAT 80 (329)
T ss_pred CEEEEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEEEC
T ss_conf 93578986030775135733345321068331123686100021472012689999999999985278866878679805
Q ss_pred CCCCC-CCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCC---CC
Q ss_conf 78875-460058888632026877358984142035888998789999739997699950332014588875334---78
Q gi|254781019|r 79 ESSVD-QSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACALVAKSPERKVLIVASDVARYDLGSSGEPT---QG 154 (396)
Q Consensus 79 ~t~~~-~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~~~~~~~~t---~G 154 (396)
T Consensus 81 ~~pd~l~fPS~Ac~~~~~LGi~-~~~aFD~~AACaGF~Y~Ls~A~~~i~SG~y~~vLvvGaeklSs~~D~~DR~TcvLFG 159 (329)
T TIGR00747 81 TTPDYLAFPSAACMVQAYLGIK-NIPAFDLSAACAGFIYGLSVAKQYIESGKYKTVLVVGAEKLSSTLDWTDRGTCVLFG 159 (329)
T ss_pred CCCCCCCCCCHHHHHHHHCCCC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCEEEEC
T ss_conf 7800003778589999761866-763222365676689999999998615770268899851105536746687579960
Q ss_pred CCEEEEEECCCCCCC--EEEECC----CCCCC--------CCCCCCC---CCCCCCEEECCHHHHHHHHHHHHHHHHHHH
Q ss_conf 302468842687630--353100----01567--------8651127---588754235660169899999999999999
Q gi|254781019|r 155 CGAVAILISSQTSIL--EIEDIT----GIYTN--------DCMDFWR---PNYRRTALVDGKYSTKIYLQSLEAVWHDYQ 217 (396)
Q Consensus 155 aGA~Allv~~~~~~~--~~~~~~----~~~~~--------~~~df~r---p~~~~~~~~dg~~~~~~y~~~~~~a~~~~l 217 (396)
T Consensus 160 DGAgA~v~g~s~~~~~~eI~~~~l~AdG~~~~~L~l~~~~~~~P~~~~~~~~~~~f~~M~G~evFk~Av~~m~~~~~~~l 239 (329)
T TIGR00747 160 DGAGAVVVGESEDDGGLEIISTNLGADGTQGELLYLPAGGRRCPFSKNTLQGSSPFITMEGNEVFKHAVRKMLKVVEETL 239 (329)
T ss_pred CCCEEEEEECCCCCCCCEEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHH
T ss_conf 67226887045787763012346530564432132067776688777734466661787373258899999999999999
Q ss_pred HHCCCCHHHCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC
Q ss_conf 96298821101233114540578888864110245441001345554333444532385432338999999997157436
Q gi|254781019|r 218 KNKGHDFNDFQYFCYHQPFTRMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALISLLDHSSENL 297 (396)
Q Consensus 218 ~~~g~~~~did~~v~H~p~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~slLe~~~~~~ 297 (396)
T Consensus 240 ~~a~l~~~DiD~lvPHQAN~RIi~a~ak~L~~~~~~----------Vv~T--v~khyGNTSAASiP~AL~E~~~-~G~iK 306 (329)
T TIGR00747 240 EAAGLSKEDIDWLVPHQANIRIIEALAKRLELKESK----------VVKT--VHKHYGNTSAASIPIALDELLE-TGRIK 306 (329)
T ss_pred HHHCCCHHHCCEECCCCHHHHHHHHHHHHHCCCCCC----------EEEE--EECCCCCCHHHHHHHHHHHHHH-CCCCC
T ss_conf 971878304615555411168999999970898031----------6863--2001346304346678999874-17777
Q ss_pred CCCEEEEEEECCCCC
Q ss_conf 988899984079830
Q gi|254781019|r 298 AGKRVGFFSYGSGCV 312 (396)
Q Consensus 298 ~G~rIll~syGsG~~ 312 (396)
T Consensus 307 ~Gd~~LL~AFGGGLt 321 (329)
T TIGR00747 307 KGDLLLLVAFGGGLT 321 (329)
T ss_pred CCCEEEEEEECHHHH
T ss_conf 244888763060356