HHsearch alignment for GI: 254781019 and conserved domain: cd00751
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=99.32 E-value=2.1e-09 Score=77.52 Aligned_cols=98 Identities=16% Similarity=0.191 Sum_probs=84.8
Q ss_pred CCCCHHHHHHHHHHHHHHHC--CHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHH
Q ss_conf 98599999999999999727--9578689999457887546005888863202687735898414203588899878999
Q gi|254781019|r 47 PDEDIVTMAAAAALPIMQNQ--DKNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACAL 124 (396)
Q Consensus 47 ~~Ed~~tmA~~Aa~~~L~~~--~~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~ 124 (396)
T Consensus 18 ~~~~~~~L~~~ai~~al~~agl~~~~Id~vi~G~~~~~g~g~n~aR~~al~aGlp~~vp~~tV~~aCaSG~~Ai~~A~~~ 97 (386)
T cd00751 18 KDVSADDLGAAVIKALLERAGLDPEEVDDVIMGNVLQAGEGQNPARQAALLAGLPESVPATTVNRVCGSGLQAVALAAQS 97 (386)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHH
T ss_conf 88989999999999999984989899998999950666656639999999769998886588842216879999999741
Q ss_pred HHCCCCCEEEEEECCCCCCC
Q ss_conf 97399976999503320145
Q gi|254781019|r 125 VAKSPERKVLIVASDVARYD 144 (396)
Q Consensus 125 i~sg~~~~aLVV~sD~~~~~ 144 (396)
T Consensus 98 I~sG~~dvvla~GvEsmS~~ 117 (386)
T cd00751 98 IAAGEADVVVAGGVESMSRA 117 (386)
T ss_pred HCCCCCCEEEEECCCCCCCC
T ss_conf 10799778887244535657