HHsearch alignment for GI: 254781019 and conserved domain: cd00828
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=98.88 E-value=2.6e-07 Score=64.48 Aligned_cols=216 Identities=17% Similarity=0.118 Sum_probs=122.8
Q ss_pred HHHHHHHHHHHHHCCH---HHCC----EEEEECCCCCCC-----------------C-------HHHHHHHHHHHCCCCC
Q ss_conf 9999999999972795---7868----999945788754-----------------6-------0058888632026877
Q gi|254781019|r 53 TMAAAAALPIMQNQDK---NLID----TLFFATESSVDQ-----------------S-------KSAAIWLHKLLGLNSS 101 (396)
Q Consensus 53 tmA~~Aa~~~L~~~~~---~~Id----~li~~T~t~~~~-----------------~-------~~~a~~v~~~Lgl~~~ 101 (396)
T Consensus 74 ~~~l~aa~~Al~dAGl~~~~~~~~~r~gv~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~~~~-~ 152 (407)
T cd00828 74 LLALVATEEALADAGITDPYEVHPSEVGVVVGSGMGGLRFLRRGGKLDARAVNPYVSPKWMLSPNTVAGWVNILLLSS-H 152 (407)
T ss_pred HHHHHHHHHHHHHCCCCCHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHCCC-C
T ss_conf 999999999999679996455278766999996774388899887765540587325023014224889999985878-8
Q ss_pred CEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC--------------CCCCC---CC--------CCCCCC
Q ss_conf 358984142035888998789999739997699950332014--------------58887---53--------347830
Q gi|254781019|r 102 CRVVELKQACYSATCALHMACALVAKSPERKVLIVASDVARY--------------DLGSS---GE--------PTQGCG 156 (396)
Q Consensus 102 ~~~~Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~--------------~~~~~---~~--------~t~GaG 156 (396)
T Consensus 153 Gp~~tv~tACaSsl~Ai~~A~~~I~~G~~d~aivGg~~~~~~~~~~~f~~~~~ls~~~~~p~~~~rPFD~~rdG~v~gEG 232 (407)
T cd00828 153 GPIKTPVGACATALEALDLAVEAIRSGKADIVVVGGVEDPLEEGLSGFANMGALSTAEEEPEEMSRPFDETRDGFVEAEG 232 (407)
T ss_pred CCCCCEECHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCEEECCC
T ss_conf 98526503507999999999666236851446643122356366799987445422789988751303667898683485
Q ss_pred EEEEEECCCC-------CCCEEEECCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCE
Q ss_conf 2468842687-------630353100015678651127588754235660169899999999999999962988211012
Q gi|254781019|r 157 AVAILISSQT-------SILEIEDITGIYTNDCMDFWRPNYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHDFNDFQY 229 (396)
Q Consensus 157 A~Allv~~~~-------~~~~~~~~~~~~~~~~~df~rp~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~~did~ 229 (396)
T Consensus 233 a~~lvLe~~~~A~~rg~~i~a~i~g~~~~~-dg~~---~-~~~~---~--------~~~~~~~~~~Al~~A~i~~~~i~y 296 (407)
T cd00828 233 AGVLVLERAELALARGAPIYGRVAGTASTT-DGAG---R-SVPA---G--------GKGIARAIRTALAKAGLSLDDLDV 296 (407)
T ss_pred CEEEEEEEHHHHHHCCCEEEEEECCEEEEC-CCCC---C-CCCC---C--------CHHHHHHHHHHHHHCCCCCCCCCE
T ss_conf 217765048667668897999643647866-8988---8-7798---6--------267899999999971999545638
Q ss_pred EEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
Q ss_conf 33114540578888864110245441001345554333444532385432338999999997
Q gi|254781019|r 230 FCYHQPFTRMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALISLLD 291 (396)
Q Consensus 230 ~v~H~p~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~slLe 291 (396)
T Consensus 297 I~aHgtgT~~gD~~E~~Al~~~f~~~~-----~~~-~i~S~K~~~GH~~~aaG~~~li~~~l 352 (407)
T cd00828 297 ISAHGTSTPANDVAESRAIAEVAGALG-----APL-PVTAQKALFGHSKGAAGALQLIGALQ 352 (407)
T ss_pred EEEECCCCCCCCHHHHHHHHHHHHCCC-----CCC-EEECCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 995167686669999999999862137-----887-04450123031678999999999999