HHsearch alignment for GI: 254781019 and conserved domain: cd00833

>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=98.78  E-value=1.1e-06  Score=60.54  Aligned_cols=218  Identities=16%  Similarity=0.172  Sum_probs=124.9

Q ss_pred             HHHHHHHHHHHHHCC--HHHCC----EEEEECCCCCCC-------------------CHHHHHHHHHHHCCCCCCEEEEE
Q ss_conf             999999999997279--57868----999945788754-------------------60058888632026877358984
Q gi|254781019|r   53 TMAAAAALPIMQNQD--KNLID----TLFFATESSVDQ-------------------SKSAAIWLHKLLGLNSSCRVVEL  107 (396)
Q Consensus        53 tmA~~Aa~~~L~~~~--~~~Id----~li~~T~t~~~~-------------------~~~~a~~v~~~Lgl~~~~~~~Di  107 (396)
T Consensus        89 rl~L~~a~eAl~dAG~~~~~~~~~r~GV~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~~~Gp--~~~v  166 (421)
T cd00833          89 RLLLEVAWEALEDAGYSPESLAGSRTGVFVGASSSDYLELLARDPDEIDAYAATGTSRAFLANRISYFFDLRGP--SLTV  166 (421)
T ss_pred             HHHHHHHHHHHHHCCCCHHHCCCCCEEEEECCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC--CCCC
T ss_conf             99999999999752898346488634999666666478897427565785301354311799999999689996--0033


Q ss_pred             CCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC--------CCC--CC-----------CCCCCCCCEEEEEECCCC
Q ss_conf             142035888998789999739997699950332014--------588--87-----------533478302468842687
Q gi|254781019|r  108 KQACYSATCALHMACALVAKSPERKVLIVASDVARY--------DLG--SS-----------GEPTQGCGAVAILISSQT  166 (396)
Q Consensus       108 ~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~--------~~~--~~-----------~~~t~GaGA~Allv~~~~  166 (396)
T Consensus       167 ~tACaSsl~Ai~~A~~~i~~G~~d~ai~Gg~~~~~~~~~~~~~~~~~~ls~~~~~rpFD~~~~G~v~gEGa~~lvLe~~~  246 (421)
T cd00833         167 DTACSSSLVALHLACQSLRSGECDLALVGGVNLILSPDMFVGFSKAGMLSPDGRCRPFDADADGYVRGEGVGVVVLKRLS  246 (421)
T ss_pred             CCHHHHHHHHHHHHHHHHHCCCCCEEEECEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHH
T ss_conf             53627999999999999857994354412000315868999986357868999856788899986555751354368789


Q ss_pred             -------CCCEEEECCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCCHH
Q ss_conf             -------6303531000156786511275887542356601698999999999999999629882110123311454057
Q gi|254781019|r  167 -------SILEIEDITGIYTNDCMDFWRPNYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHDFNDFQYFCYHQPFTRM  239 (396)
Q Consensus       167 -------~~~~~~~~~~~~~~~~~df~rp~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~~did~~v~H~p~~k~  239 (396)
T Consensus       247 ~A~~~g~~I~a~i~G~g~~~----dg~~~-~~~~P--~--------~~~~~~~~~~al~~agi~~~~i~yieaHgtgT~~  311 (421)
T cd00833         247 DALRDGDRIYAVIRGSAVNQ----DGRTK-GITAP--S--------GEAQAALIRRAYARAGVDPSDIDYVEAHGTGTPL  311 (421)
T ss_pred             HHHHCCCCEEEEEEEEEECC----CCCCC-CCCCC--C--------HHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCC
T ss_conf             99876994799998999806----89777-88887--5--------6689999999999729994412089974476866


Q ss_pred             HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
Q ss_conf             888886411024544100134555433344453238543233899999999
Q gi|254781019|r  240 AEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALISLL  290 (396)
Q Consensus       240 ~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~slL  290 (396)
T Consensus       312 gD~~E~~ai~~~f~~~~--~~~~~~-~v~S~Ks~~GH~~~AaG~~~~i~~~  359 (421)
T cd00833         312 GDPIEVEALAKVFGGSR--SADQPL-LIGSVKSNIGHLEAAAGLAGLIKVV  359 (421)
T ss_pred             CCHHHHHHHHHHHCCCC--CCCCCC-CCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf             69999999999961257--777863-0235434534335767999999999