Query gi|254781019|ref|YP_003065432.1| hydroxymethylglutaryl-coenzyme A synthase [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 396
No_of_seqs 215 out of 2307
Neff 8.2
Searched_HMMs 39220
Date Mon May 30 04:52:11 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254781019.hhm -d /home/congqian_1/database/cdd/Cdd.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR01835 HMG-CoA-S_prok hydro 100.0 0 0 741.8 20.7 383 3-385 1-412 (412)
2 TIGR01833 HMG-CoA-S_euk hydrox 100.0 0 0 676.6 21.4 386 2-388 4-461 (461)
3 COG3425 PksG 3-hydroxy-3-methy 100.0 0 0 656.5 34.3 375 1-388 1-377 (377)
4 KOG1393 consensus 100.0 0 0 569.9 25.9 391 2-393 11-459 (462)
5 PRK04262 hypothetical protein; 100.0 0 0 558.7 33.7 339 1-354 1-343 (346)
6 TIGR00747 fabH 3-oxoacyl-(acyl 100.0 0 0 442.8 22.5 298 1-312 1-321 (329)
7 PRK09352 3-oxoacyl-(acyl carri 100.0 0 0 400.6 31.4 298 1-314 2-313 (319)
8 PRK09258 3-oxoacyl-(acyl carri 100.0 0 0 401.3 27.6 299 3-315 1-334 (339)
9 COG0332 FabH 3-oxoacyl-[acyl-c 100.0 0 0 401.1 27.8 299 1-314 2-316 (323)
10 PRK07204 3-oxoacyl-(acyl carri 100.0 0 0 391.6 29.4 296 2-312 4-321 (329)
11 PRK06816 3-oxoacyl-(acyl carri 100.0 0 0 391.6 28.8 310 1-321 1-378 (378)
12 PRK12879 3-oxoacyl-(acyl carri 100.0 0 0 386.8 31.2 298 3-316 5-321 (326)
13 CHL00203 fabH 3-oxoacyl-acyl-c 100.0 0 0 386.6 31.4 295 3-314 1-319 (327)
14 PRK07515 3-oxoacyl-(acyl carri 100.0 0 0 389.1 24.9 295 2-312 2-363 (372)
15 PRK05963 3-oxoacyl-(acyl carri 100.0 0 0 384.0 28.8 294 3-312 5-319 (327)
16 cd00830 KAS_III Ketoacyl-acyl 100.0 0 0 382.7 29.6 296 2-313 1-315 (320)
17 PRK06840 hypothetical protein; 100.0 0 0 378.8 29.1 296 1-313 3-328 (337)
18 PRK12880 3-oxoacyl-(acyl carri 100.0 0 0 376.7 26.9 293 2-312 7-330 (353)
19 cd00827 init_cond_enzymes "ini 100.0 0 0 366.5 28.1 300 2-316 1-322 (324)
20 TIGR00748 HMG_CoA_syn_Arc hydr 100.0 0 0 371.3 17.7 339 2-354 1-344 (347)
21 pfam08540 HMG_CoA_synt_C Hydro 100.0 0 0 355.8 17.6 218 171-388 4-282 (282)
22 cd00831 CHS_like Chalcone and 100.0 0 0 332.9 28.7 301 3-315 2-358 (361)
23 pfam01154 HMG_CoA_synt_N Hydro 100.0 0 0 315.5 18.0 165 2-167 1-171 (171)
24 COG3424 BcsA Predicted naringe 100.0 2.8E-33 7.3E-38 225.8 25.6 303 4-319 3-351 (356)
25 cd00327 cond_enzymes Condensin 100.0 6.1E-30 1.6E-34 205.1 20.0 233 46-312 2-248 (254)
26 pfam00195 Chal_sti_synt_N Chal 99.9 4E-24 1E-28 169.0 16.9 162 4-166 18-228 (228)
27 pfam08541 ACP_syn_III_C 3-Oxoa 99.6 5.4E-15 1.4E-19 112.2 7.5 85 217-315 1-85 (90)
28 cd00829 SCP-x_thiolase Thiolas 99.5 3.8E-11 9.7E-16 88.3 20.1 191 47-249 12-293 (375)
29 cd00825 decarbox_cond_enzymes 99.5 7.2E-12 1.8E-16 92.8 15.2 215 51-290 11-280 (332)
30 pfam08392 FAE1_CUT1_RppA FAE1/ 99.4 6.7E-12 1.7E-16 93.0 14.5 165 2-167 8-208 (290)
31 PRK06059 lipid-transfer protei 99.4 2E-10 5E-15 83.9 21.9 266 36-309 10-387 (399)
32 PRK06157 acetyl-CoA acetyltran 99.4 2.6E-09 6.6E-14 76.9 25.0 104 36-141 13-118 (400)
33 PRK06365 acetyl-CoA acetyltran 99.4 2.1E-09 5.4E-14 77.4 24.4 275 36-314 8-408 (415)
34 PRK08256 lipid-transfer protei 99.4 1.4E-09 3.5E-14 78.6 23.2 93 46-142 17-111 (391)
35 PRK12578 acetyl-CoA acetyltran 99.4 6E-10 1.5E-14 80.8 21.1 95 47-142 17-113 (385)
36 PRK06363 consensus 99.4 4.3E-10 1.1E-14 81.8 19.9 249 47-311 18-374 (387)
37 PRK06364 consensus 99.3 1.2E-09 3.2E-14 78.9 20.4 252 47-314 21-383 (389)
38 PRK06158 thiolase; Provisional 99.3 1.6E-09 4.2E-14 78.1 20.8 192 36-248 14-295 (384)
39 cd00751 thiolase Thiolase are 99.3 2.1E-09 5.2E-14 77.5 20.9 98 47-144 18-117 (386)
40 PRK06289 acetyl-CoA acetyltran 99.3 4.4E-09 1.1E-13 75.5 22.3 100 43-143 18-122 (408)
41 PRK08313 acetyl-CoA acetyltran 99.3 1.5E-08 3.9E-13 72.1 24.7 95 46-141 20-117 (391)
42 PRK06064 acetyl-CoA acetyltran 99.3 7.6E-10 1.9E-14 80.2 17.8 96 47-143 18-117 (389)
43 PRK07516 acetyl-CoA acetyltran 99.3 2.6E-09 6.6E-14 76.9 20.4 96 47-143 18-117 (389)
44 PRK06065 acetyl-CoA acetyltran 99.3 4.5E-09 1.2E-13 75.4 21.1 257 36-312 16-383 (393)
45 cd00826 nondecarbox_cond_enzym 99.3 9.5E-10 2.4E-14 79.6 17.5 98 47-144 19-118 (393)
46 PRK07800 consensus 99.3 7.8E-10 2E-14 80.1 16.6 99 47-145 22-122 (393)
47 PRK08235 acetyl-CoA acetyltran 99.3 5.1E-10 1.3E-14 81.3 15.1 98 47-144 22-121 (393)
48 PRK08371 consensus 99.3 1.6E-09 4E-14 78.2 17.3 96 47-143 18-115 (388)
49 pfam02797 Chal_sti_synt_C Chal 99.2 6.7E-11 1.7E-15 86.8 9.0 116 192-317 25-146 (151)
50 cd00834 KAS_I_II Beta-ketoacyl 99.2 7.2E-09 1.8E-13 74.1 18.8 266 1-290 1-352 (406)
51 PRK06504 acetyl-CoA acetyltran 99.2 6.9E-09 1.8E-13 74.2 16.8 100 46-145 21-123 (390)
52 PRK07801 acetyl-CoA acetyltran 99.2 4.5E-09 1.2E-13 75.4 15.3 99 47-145 22-123 (382)
53 PRK07314 3-oxoacyl-(acyl carri 99.2 2.6E-08 6.6E-13 70.7 19.2 261 2-289 3-352 (411)
54 PRK08242 acetyl-CoA acetyltran 99.1 3.3E-08 8.5E-13 70.0 18.9 99 47-145 24-125 (402)
55 PRK05952 3-oxoacyl-(acyl carri 99.1 1.8E-07 4.6E-12 65.4 22.6 255 1-290 2-326 (379)
56 PRK08041 consensus 99.1 1.9E-08 4.8E-13 71.5 16.5 99 47-145 22-122 (391)
57 PRK08142 acetyl-CoA acetyltran 99.1 1.3E-08 3.4E-13 72.5 15.7 98 36-139 11-110 (388)
58 pfam08545 ACP_syn_III 3-Oxoacy 99.1 2.1E-10 5.4E-15 83.6 6.4 63 105-167 1-66 (80)
59 PRK07855 lipid-transfer protei 99.1 2.9E-07 7.3E-12 64.2 21.6 97 36-139 10-109 (386)
60 PRK06954 acetyl-CoA acetyltran 99.1 3.7E-08 9.4E-13 69.7 17.0 99 47-145 27-127 (397)
61 TIGR03150 fabF 3-oxoacyl-[acyl 99.1 7.6E-08 1.9E-12 67.8 18.5 265 2-290 2-352 (407)
62 PRK06445 acetyl-CoA acetyltran 99.1 3.7E-08 9.5E-13 69.7 16.8 98 47-144 28-128 (394)
63 PRK08947 fadA 3-ketoacyl-CoA t 99.1 4.1E-08 1E-12 69.5 16.9 99 47-145 23-125 (387)
64 PRK06333 3-oxoacyl-(acyl carri 99.1 1.9E-08 4.8E-13 71.6 14.9 264 2-290 5-364 (424)
65 PRK06066 acetyl-CoA acetyltran 99.0 1.5E-07 3.8E-12 66.0 17.8 253 36-311 8-370 (375)
66 PRK05656 acetyl-CoA acetyltran 99.0 4E-07 1E-11 63.3 19.0 99 47-145 22-122 (392)
67 PRK09051 beta-ketothiolase; Pr 99.0 4E-07 1E-11 63.3 18.9 100 46-145 22-124 (394)
68 PRK07124 consensus 99.0 1.4E-08 3.6E-13 72.3 11.4 99 47-145 22-122 (402)
69 smart00825 PKS_KS Beta-ketoacy 98.9 1.3E-07 3.3E-12 66.3 15.7 216 53-290 89-359 (424)
70 PRK06633 acetyl-CoA acetyltran 98.9 2.1E-06 5.4E-11 58.8 21.9 98 47-144 23-122 (392)
71 PTZ00050 3-oxoacyl-acyl carrie 98.9 1.7E-07 4.4E-12 65.6 16.2 216 51-290 134-416 (477)
72 PRK06025 acetyl-CoA acetyltran 98.9 1.3E-06 3.2E-11 60.2 20.3 98 47-144 25-125 (417)
73 PRK07108 acetyl-CoA acetyltran 98.9 1.3E-07 3.4E-12 66.3 15.2 98 47-144 23-123 (392)
74 PRK05790 acetyl-CoA acetyltran 98.9 2.6E-08 6.5E-13 70.7 11.5 99 47-145 22-122 (393)
75 PRK07937 lipid-transfer protei 98.9 1.7E-07 4.4E-12 65.5 15.5 87 50-141 23-113 (352)
76 PRK06501 3-oxoacyl-(acyl carri 98.9 7.5E-07 1.9E-11 61.6 18.2 179 87-288 153-364 (425)
77 PRK07851 acetyl-CoA acetyltran 98.9 7.8E-08 2E-12 67.7 13.1 97 47-144 23-123 (405)
78 PRK07103 polyketide beta-ketoa 98.9 1.5E-07 3.9E-12 65.9 14.5 261 1-290 6-359 (415)
79 PRK09116 3-oxoacyl-(acyl carri 98.9 3.4E-07 8.6E-12 63.7 16.1 209 51-287 4-277 (336)
80 PRK06147 3-oxoacyl-(acyl carri 98.9 1.1E-06 2.9E-11 60.5 18.5 241 52-316 65-338 (346)
81 cd00828 elong_cond_enzymes "el 98.9 2.6E-07 6.6E-12 64.5 15.2 216 53-291 74-352 (407)
82 PRK08722 3-oxoacyl-(acyl carri 98.9 2.6E-07 6.6E-12 64.5 15.1 261 3-288 6-354 (414)
83 PRK09185 3-oxoacyl-(acyl carri 98.9 6.1E-07 1.5E-11 62.2 16.6 143 87-246 138-301 (395)
84 PRK07910 3-oxoacyl-(acyl carri 98.9 4.1E-07 1E-11 63.3 15.5 210 53-288 85-359 (418)
85 PRK08768 consensus 98.8 6E-07 1.5E-11 62.2 16.2 266 1-290 1-354 (411)
86 PRK09052 acetyl-CoA acetyltran 98.8 5.5E-06 1.4E-10 56.2 20.8 99 47-145 27-129 (399)
87 PRK06845 consensus 98.8 7.6E-08 1.9E-12 67.8 11.1 98 47-144 22-122 (392)
88 cd00832 CLF Chain-length facto 98.8 9.2E-07 2.3E-11 61.1 16.3 211 51-290 71-345 (399)
89 PRK07967 3-oxoacyl-(acyl carri 98.8 3.3E-06 8.5E-11 57.6 18.6 255 1-287 1-343 (406)
90 cd00833 PKS polyketide synthas 98.8 1.1E-06 2.8E-11 60.5 15.8 218 53-290 89-359 (421)
91 PRK06205 acetyl-CoA acetyltran 98.8 3.9E-07 1E-11 63.3 13.3 99 47-145 22-122 (404)
92 PRK07025 consensus 98.8 1.7E-07 4.3E-12 65.6 11.4 99 47-145 22-122 (393)
93 pfam00108 Thiolase_N Thiolase, 98.7 2.1E-07 5.3E-12 65.1 11.2 99 47-145 22-122 (264)
94 PRK07491 consensus 98.7 2.3E-07 5.8E-12 64.8 11.1 99 47-145 23-123 (392)
95 PRK06366 acetyl-CoA acetyltran 98.7 3.1E-07 7.8E-12 64.0 11.4 99 47-145 22-122 (388)
96 PRK08170 acetyl-CoA acetyltran 98.7 3.3E-07 8.4E-12 63.8 11.4 99 47-145 23-123 (426)
97 PRK08963 fadI 3-ketoacyl-CoA t 98.7 4.4E-07 1.1E-11 63.0 11.5 100 46-145 32-133 (436)
98 PRK08439 3-oxoacyl-(acyl carri 98.7 5.9E-06 1.5E-10 56.0 17.2 258 1-290 1-348 (405)
99 TIGR02845 spore_V_AD stage V s 98.7 1.1E-06 2.9E-11 60.5 13.4 179 48-250 42-246 (331)
100 PRK09268 acetyl-CoA acetyltran 98.7 6.5E-07 1.7E-11 62.0 11.5 99 47-145 27-127 (428)
101 PRK08131 acetyl-CoA acetyltran 98.6 7.3E-07 1.9E-11 61.7 11.3 99 47-145 22-123 (401)
102 PRK06689 consensus 98.6 1.3E-06 3.2E-11 60.2 11.3 99 47-145 22-122 (391)
103 PRK07850 acetyl-CoA acetyltran 98.5 2.3E-06 5.8E-11 58.6 11.4 99 47-145 22-123 (387)
104 TIGR01930 AcCoA-C-Actrans acet 98.5 1.4E-06 3.6E-11 59.9 10.2 99 47-145 20-122 (447)
105 PRK09050 beta-ketoadipyl CoA t 98.5 2.4E-06 6.2E-11 58.4 11.3 99 47-145 22-124 (401)
106 PRK08234 consensus 98.5 2.6E-06 6.5E-11 58.3 11.3 99 47-145 22-124 (400)
107 PRK06690 acetyl-CoA acetyltran 98.5 2.3E-05 5.9E-10 52.4 15.8 96 47-145 21-116 (361)
108 PRK13359 beta-ketoadipyl CoA t 98.4 5.4E-06 1.4E-10 56.3 11.1 99 47-145 22-124 (400)
109 PRK07661 acetyl-CoA acetyltran 98.3 1.7E-05 4.3E-10 53.2 10.4 99 47-145 17-117 (384)
110 COG0304 FabB 3-oxoacyl-(acyl-c 98.2 0.00012 3E-09 47.9 14.1 179 50-245 70-314 (412)
111 PRK08304 stage V sporulation p 98.1 0.00039 9.9E-09 44.7 14.1 237 51-313 56-315 (336)
112 pfam07451 SpoVAD Stage V sporu 98.0 0.00075 1.9E-08 43.0 15.2 236 51-312 51-309 (329)
113 KOG1390 consensus 97.9 0.00079 2E-08 42.8 13.7 98 48-145 27-126 (396)
114 pfam00109 ketoacyl-synt Beta-k 97.9 0.00013 3.3E-09 47.7 9.5 87 53-141 78-194 (243)
115 PRK12404 stage V sporulation p 97.9 0.002 5.2E-08 40.2 15.9 235 51-312 54-312 (334)
116 COG0183 PaaJ Acetyl-CoA acetyl 97.7 0.00049 1.2E-08 44.1 9.5 96 51-146 27-127 (392)
117 COG3321 Polyketide synthase mo 97.7 0.0031 7.9E-08 39.1 13.0 172 54-243 94-319 (1061)
118 KOG1394 consensus 97.3 0.0039 9.9E-08 38.5 9.9 178 51-245 94-339 (440)
119 KOG1389 consensus 97.2 0.014 3.5E-07 35.1 11.8 92 51-143 61-155 (435)
120 PRK08257 acetyl-CoA acetyltran 97.0 0.015 4E-07 34.8 10.6 106 34-141 10-120 (502)
121 PRK06519 3-oxoacyl-(acyl carri 96.9 0.034 8.8E-07 32.6 15.1 160 52-237 74-309 (397)
122 KOG1406 consensus 96.5 0.0086 2.2E-07 36.4 6.3 91 48-142 26-118 (408)
123 KOG1202 consensus 95.7 0.051 1.3E-06 31.6 6.7 179 51-241 87-310 (2376)
124 KOG1391 consensus 94.9 0.083 2.1E-06 30.2 5.8 94 49-145 26-125 (396)
125 KOG1392 consensus 92.9 0.17 4.3E-06 28.3 4.3 91 49-140 64-157 (465)
126 pfam02803 Thiolase_C Thiolase, 91.4 1 2.6E-05 23.5 6.7 87 206-308 21-110 (123)
127 pfam02801 Ketoacyl-synt_C Beta 91.0 0.59 1.5E-05 24.9 5.2 79 207-291 25-103 (117)
128 TIGR02430 pcaF beta-ketoadipyl 75.3 5.7 0.00014 18.8 5.1 90 53-142 27-120 (400)
129 pfam01135 PCMT Protein-L-isoas 66.9 8.1 0.00021 17.9 3.7 42 274-316 50-91 (205)
130 PRK00312 pcm protein-L-isoaspa 64.7 8.8 0.00022 17.6 3.5 38 275-313 56-93 (213)
131 PRK13944 protein-L-isoaspartat 64.2 9.6 0.00024 17.4 3.6 39 274-313 49-87 (205)
132 PRK13942 protein-L-isoaspartat 63.3 10 0.00026 17.2 4.8 39 275-314 54-92 (214)
133 COG3894 Uncharacterized metal- 63.1 9.4 0.00024 17.5 3.4 70 206-288 473-542 (614)
134 TIGR02446 FadI acetyl-CoA C-ac 62.9 10 0.00027 17.2 4.0 95 49-143 29-125 (430)
135 PRK13980 NAD synthetase; Provi 61.9 11 0.00027 17.2 3.5 119 35-161 24-158 (264)
136 TIGR00454 TIGR00454 conserved 57.9 13 0.00032 16.6 5.1 93 43-142 13-110 (204)
137 TIGR02823 oxido_YhdH putative 55.5 8.7 0.00022 17.7 2.2 207 130-353 42-302 (330)
138 cd01451 vWA_Magnesium_chelatas 54.9 14 0.00036 16.3 5.5 87 49-140 16-108 (178)
139 PRK11706 TDP-4-oxo-6-deoxy-D-g 52.2 12 0.00031 16.8 2.5 63 33-109 40-102 (375)
140 KOG2915 consensus 49.7 4.4 0.00011 19.5 -0.1 21 87-107 118-138 (314)
141 PRK13943 protein-L-isoaspartat 49.5 17 0.00044 15.8 3.6 34 85-119 60-93 (317)
142 KOG4342 consensus 47.3 19 0.00048 15.6 3.9 38 275-312 457-496 (1078)
143 TIGR01265 tyr_nico_aTase tyros 46.1 15 0.00038 16.2 2.1 121 17-146 19-164 (424)
144 TIGR03588 PseC UDP-4-keto-6-de 45.7 19 0.00048 15.6 2.6 62 33-108 38-99 (380)
145 PRK08507 prephenate dehydrogen 44.9 20 0.00052 15.4 3.1 38 68-110 56-93 (275)
146 TIGR02813 omega_3_PfaA polyket 43.9 21 0.00054 15.3 5.7 127 8-141 78-240 (2773)
147 TIGR00263 trpB tryptophan synt 42.7 22 0.00056 15.2 4.9 141 9-165 11-164 (412)
148 PRK11658 UDP-4-amino-4-deoxy-L 42.4 21 0.00055 15.2 2.5 62 33-108 42-103 (379)
149 PRK07591 threonine synthase; V 40.5 24 0.00061 15.0 3.8 36 276-312 358-393 (422)
150 TIGR03285 methan_mark_14 putat 40.2 24 0.00062 14.9 4.1 33 47-79 61-95 (445)
151 TIGR00108 eRF peptide chain re 39.9 22 0.00056 15.2 2.2 75 68-147 29-104 (425)
152 COG3897 Predicted methyltransf 38.4 25 0.00064 14.8 2.3 10 213-222 164-173 (218)
153 COG0533 QRI7 Metal-dependent p 38.3 26 0.00066 14.7 4.1 79 55-139 54-136 (342)
154 PRK05638 threonine synthase; V 37.8 26 0.00067 14.7 3.8 37 275-312 322-358 (443)
155 pfam01041 DegT_DnrJ_EryC1 DegT 35.2 29 0.00074 14.4 2.5 62 33-108 34-95 (363)
156 pfam05834 Lycopene_cycl Lycope 34.9 29 0.00075 14.4 3.0 20 207-226 213-232 (374)
157 PRK07417 arogenate dehydrogena 33.1 31 0.0008 14.2 3.1 90 1-112 2-96 (280)
158 PRK02478 Maf-like protein; Rev 32.6 32 0.00081 14.2 3.1 27 74-106 5-31 (199)
159 PRK03359 putative electron tra 32.3 32 0.00083 14.1 4.9 25 53-77 39-63 (256)
160 PRK08197 threonine synthase; V 31.7 33 0.00084 14.1 3.7 35 277-312 347-381 (402)
161 TIGR00080 pimt protein-L-isoas 30.7 34 0.00088 14.0 3.3 47 270-316 53-100 (228)
162 PRK04425 Maf-like protein; Rev 30.7 24 0.00061 14.9 1.2 63 74-142 7-75 (196)
163 pfam02666 PS_Dcarbxylase Phosp 29.9 33 0.00083 14.1 1.8 25 292-317 154-178 (201)
164 COG2230 Cfa Cyclopropane fatty 29.5 26 0.00067 14.7 1.2 30 92-123 64-93 (283)
165 TIGR00631 uvrb excinuclease AB 29.2 36 0.00093 13.8 2.8 79 268-355 305-390 (667)
166 pfam00814 Peptidase_M22 Glycop 29.0 37 0.00094 13.8 4.0 52 56-109 33-88 (225)
167 cd00616 AHBA_syn 3-amino-5-hyd 28.9 37 0.00094 13.8 2.5 64 32-109 26-89 (352)
168 TIGR03419 NifU_clost FeS clust 28.1 38 0.00097 13.7 2.1 16 206-221 106-121 (121)
169 TIGR01752 flav_long flavodoxin 27.8 39 0.00098 13.7 2.7 36 73-110 3-38 (176)
170 PRK08317 hypothetical protein; 26.4 41 0.001 13.5 6.1 204 88-356 7-219 (241)
171 TIGR01225 hutH histidine ammon 25.9 42 0.0011 13.4 1.8 14 74-87 49-62 (529)
172 KOG2112 consensus 25.9 42 0.0011 13.4 2.3 86 222-319 26-112 (206)
173 PRK08361 aspartate aminotransf 25.8 42 0.0011 13.4 6.1 90 38-137 33-123 (390)
174 TIGR03496 FliI_clade1 flagella 25.5 42 0.0011 13.4 3.3 36 277-321 258-293 (411)
175 COG2518 Pcm Protein-L-isoaspar 25.3 43 0.0011 13.4 2.8 20 294-313 68-87 (209)
176 PRK06260 threonine synthase; V 25.2 43 0.0011 13.4 3.7 43 269-312 327-372 (400)
177 cd01467 vWA_BatA_type VWA BatA 25.0 43 0.0011 13.3 5.7 86 49-139 23-111 (180)
178 pfam08704 GCD14 tRNA methyltra 25.0 16 0.00042 16.0 -0.5 38 85-122 87-124 (309)
179 COG0133 TrpB Tryptophan syntha 24.8 44 0.0011 13.3 5.3 141 9-164 14-163 (396)
180 pfam04298 Zn_peptidase_2 Putat 24.5 44 0.0011 13.3 2.3 18 334-351 173-190 (222)
181 pfam02353 CMAS Cyclopropane-fa 24.0 45 0.0012 13.2 2.4 91 18-116 6-102 (273)
182 TIGR02288 PaaN_2 phenylacetic 23.3 47 0.0012 13.1 3.9 85 51-143 240-327 (560)
183 PRK09585 anmK anhydro-N-acetyl 22.6 48 0.0012 13.1 4.0 56 54-110 72-139 (366)
184 TIGR02707 butyr_kinase butyrat 21.9 50 0.0013 13.0 2.8 28 210-237 158-185 (353)
185 pfam02514 CobN-Mg_chel CobN/Ma 21.7 50 0.0013 12.9 3.6 13 81-93 264-276 (1064)
186 PRK08942 D,D-heptose 1,7-bisph 21.2 51 0.0013 12.9 4.6 49 198-248 60-117 (181)
187 pfam00670 AdoHcyase_NAD S-aden 21.2 52 0.0013 12.9 2.7 21 289-309 13-33 (162)
188 TIGR01246 dapE_proteo succinyl 21.1 52 0.0013 12.9 1.5 201 39-249 9-320 (383)
189 cd05125 Mth938_2P1-like Mth938 21.1 52 0.0013 12.9 3.2 42 70-114 54-96 (114)
190 TIGR02771 TraF_Ti conjugative 20.9 52 0.0013 12.8 2.7 30 276-306 30-60 (183)
191 cd00248 Mth938-like Mth938-lik 20.7 53 0.0013 12.8 4.3 60 49-114 34-94 (109)
192 pfam00012 HSP70 Hsp70 protein. 20.6 53 0.0013 12.8 3.6 37 205-241 304-340 (598)
193 PRK09605 O-sialoglycoprotein e 20.6 53 0.0014 12.8 4.2 78 54-139 52-134 (536)
194 cd06449 ACCD Aminocyclopropane 20.4 53 0.0014 12.8 7.3 34 274-308 273-306 (307)
195 PRK05305 phosphatidylserine de 20.3 54 0.0014 12.8 1.4 22 291-312 163-184 (214)
No 1
>TIGR01835 HMG-CoA-S_prok hydroxymethylglutaryl-CoA synthase; InterPro: IPR011554 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase. Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA . HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria . In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi . In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes , . This entry represents HMG-CoA synthase enzymes found in a limited spectrum of mostly Gram-positive bacteria, which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway..
Probab=100.00 E-value=0 Score=741.81 Aligned_cols=383 Identities=50% Similarity=0.838 Sum_probs=373.2
Q ss_pred CEEEEEEEECCCEEECHHHHHH-----HCCCCHHHHHHHCC---CCEEEECCCCCCHHHHHHHHHHHHHHHC--CHHHCC
Q ss_conf 2066888734890455999998-----70999879763038---3246655998599999999999999727--957868
Q gi|254781019|r 3 IGIEDISFYTTNQYLDLSVIAE-----KYRLDVAKFYVGIG---QERMSVLNPDEDIVTMAAAAALPIMQNQ--DKNLID 72 (396)
Q Consensus 3 vGI~~i~~y~P~~~v~~~~l~~-----~~g~~~~k~~~~lG---i~~r~v~~~~Ed~~tmA~~Aa~~~L~~~--~~~~Id 72 (396)
|||++|++|+|+++|+..+|++ .+|++|+|+.+|+| |++++|++.+||+||||++|++.+|++. |.++||
T Consensus 1 IGI~~I~F~~p~~yl~~~~LAEnPLYF~~gv~p~K~~~GIgatLQ~~~~~~~~~eDiVTmAA~Aa~~Il~~~nLd~~~Id 80 (412)
T TIGR01835 1 IGIDKISFFTPQYYLDLTALAENPLYFARGVDPEKFSKGIGATLQKKMAVPPIDEDIVTMAASAAKPILDRNNLDKQKID 80 (412)
T ss_pred CCCCHHHHHCCCCCCCHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 97011234403000353566304114541766435757743677765068978864578899999974324206844234
Q ss_pred EEEEECCCCCCCCHHHHHHHHHHHCCCCCCE-----EEEECCCHHHHHHHHHHHHHHHHCCCC-CEEEEEECCCCCCCCC
Q ss_conf 9999457887546005888863202687735-----898414203588899878999973999-7699950332014588
Q gi|254781019|r 73 TLFFATESSVDQSKSAAIWLHKLLGLNSSCR-----VVELKQACYSATCALHMACALVAKSPE-RKVLIVASDVARYDLG 146 (396)
Q Consensus 73 ~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~-----~~Di~~aC~g~~~AL~~A~~~i~sg~~-~~aLVV~sD~~~~~~~ 146 (396)
+||+||||++|.+|+.|++||++||+.|.|| +|++++||||+|+||++|..+|+.+|. +++|||+||+++|...
T Consensus 81 ~Vi~gTESgID~SKAaavyvh~LLgl~p~cRGnnFL~~ElK~ACYGATAaLq~A~~hv~~~P~s~kVLViaSDiAkY~~~ 160 (412)
T TIGR01835 81 MVIFGTESGIDQSKAAAVYVHGLLGLQPFCRGNNFLSFELKQACYGATAALQMAKGHVARSPNSRKVLVIASDIAKYGLE 160 (412)
T ss_pred EEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCC
T ss_conf 78975105266899999999998277843104542243277777999999999999985188866016888631122779
Q ss_pred CCCCCCCCCCEEEEEECCCCCCCEEEECCC-CCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHH
Q ss_conf 875334783024688426876303531000-1567865112758875423566016989999999999999996298821
Q gi|254781019|r 147 SSGEPTQGCGAVAILISSQTSILEIEDITG-IYTNDCMDFWRPNYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHDFN 225 (396)
Q Consensus 147 ~~~~~t~GaGA~Allv~~~~~~~~~~~~~~-~~~~~~~df~rp~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~~ 225 (396)
+++|+|||||||||||+.||+++.+...++ .+|.|++|||||+++.+|.|||++|.++|+.++.++|++|.++.+++++
T Consensus 161 t~GE~TQGAGAVA~Li~~dP~~l~i~~~~~G~~T~DimDFWRP~y~~~a~VdG~~S~~~Yl~a~~~aW~dy~~~~~~~l~ 240 (412)
T TIGR01835 161 TPGEATQGAGAVAMLISADPKLLAINEDSVGLYTDDIMDFWRPNYSTTALVDGQYSTEQYLNALEEAWNDYKERTGLSLE 240 (412)
T ss_pred CCCCCCHHHHHHHHHHHCCCHHHHCCCCCCCEECCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHCCCCHH
T ss_conf 89886166899999874180120015876531213312121789885531646046889999999999999972389756
Q ss_pred HCCE---EEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH------HCCCCCCCHHHHHHHHHHHHCC--
Q ss_conf 1012---3311454057888886411024544100134555433344453------2385432338999999997157--
Q gi|254781019|r 226 DFQY---FCYHQPFTRMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNR------LIGNSYTASLYIALISLLDHSS-- 294 (396)
Q Consensus 226 did~---~v~H~p~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~------~~GN~~SASi~l~L~slLe~~~-- 294 (396)
||++ ||||+||+||+.|++..++.....+..+..++..+..++.|++ +|||+|||||||+|+++||++.
T Consensus 241 DfaanYR~~fH~PftKMg~Ka~~~~l~~~~~~~~k~~~~~~y~~Si~Y~~Gveaam~vGN~YTGSlyLgL~sLLena~sk 320 (412)
T TIGR01835 241 DFAANYRFCFHVPFTKMGLKALRHILKKNKEDEDKDSVQKAYEESILYNRGVEAAMEVGNLYTGSLYLGLASLLENAQSK 320 (412)
T ss_pred HHHCCCCEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCC
T ss_conf 75315717870787420379999987404781268999998753367852344333305413788999999986303664
Q ss_pred CCCCCCEEEEEEECCCCCEEEEEEEEECCHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHCCCCCC-CCCCCCCCCCCCE
Q ss_conf 436988899984079830377877860226876520387889742722389999999863068888-7631666788866
Q gi|254781019|r 295 ENLAGKRVGFFSYGSGCVAEFFSGIVQKNYRKKSHQKRHQHIINSRIPISYQVYCDLHQDIIPSVE-GNCTIPHTTTGPF 373 (396)
Q Consensus 295 ~~~~G~rIll~syGsG~~a~~f~~~v~~~~~~~~~~~~~~~~L~~r~~l~~~~y~~~~~~~~~~~~-~~~~~~~~~~~~~ 373 (396)
+++.|++|+|||||||+++|||+++|++++++++..+++++.|++|+.+++++|+++|+...+..+ .+...+.+.+|.|
T Consensus 321 ~d~tG~~Igl~SYGSGavaEFF~g~l~~Gy~~~L~~~~~~~~l~~R~~~~~~eY~~~F~~~~~~dg~~~~~~~~~~~~~f 400 (412)
T TIGR01835 321 EDLTGDKIGLFSYGSGAVAEFFSGTLVEGYEDHLKKERHLELLKNRTEVSVAEYEKLFEETIPTDGSDSADATGEDRGEF 400 (412)
T ss_pred CCCCCCEEEEEECCCCCEEEEEEEEECHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHH
T ss_conf 43131111100125220110010044045898878999999987177468899999986206898875001566220255
Q ss_pred EEEEEECCEEEE
Q ss_conf 983565538998
Q gi|254781019|r 374 RLATIQNHKRIY 385 (396)
Q Consensus 374 ~l~~i~~~~R~Y 385 (396)
.|.+|.||+|.|
T Consensus 401 ~l~~I~d~~R~Y 412 (412)
T TIGR01835 401 RLAGINDHKRIY 412 (412)
T ss_pred HHHHHCCCCCCC
T ss_conf 554440676779
No 2
>TIGR01833 HMG-CoA-S_euk hydroxymethylglutaryl-CoA synthase; InterPro: IPR010122 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase. Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA . HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria . In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi . In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes , . This entry is specific for eukaryotic HMG-CoA synthase enzymes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process.
Probab=100.00 E-value=0 Score=676.57 Aligned_cols=386 Identities=30% Similarity=0.489 Sum_probs=355.5
Q ss_pred CCEEEEEEEECCCEEECHHHHHHHCCCCHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHC--CHHHCCEEEEECC
Q ss_conf 62066888734890455999998709998797630383246655998599999999999999727--9578689999457
Q gi|254781019|r 2 AIGIEDISFYTTNQYLDLSVIAEKYRLDVAKFYVGIGQERMSVLNPDEDIVTMAAAAALPIMQNQ--DKNLIDTLFFATE 79 (396)
Q Consensus 2 ~vGI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~~lGi~~r~v~~~~Ed~~tmA~~Aa~~~L~~~--~~~~Id~li~~T~ 79 (396)
+|||.+|..|+|..||++.+||.+.|++.|||+.||||.+|+||.+.||+.+|+++|+.+||+++ ++++|++|.||||
T Consensus 4 dVGI~al~~yfP~~yV~Q~~LE~yDgVs~GKYTiGLGq~~mgFc~drEDI~Sl~LTvv~~L~er~~id~~~IGRLEVGTE 83 (461)
T TIGR01833 4 DVGILALEIYFPSQYVDQAELEKYDGVSAGKYTIGLGQTKMGFCTDREDINSLCLTVVSKLMERYQIDYNKIGRLEVGTE 83 (461)
T ss_pred CCEEEEEEEECCCCCCCHHHHHHHCCCCCCCEEECCCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCE
T ss_conf 74068888636887526577863268888950342356620000221015666589999999860787154311010425
Q ss_pred CCCCCCHHHHHHHHHHHCC--CCCCEEEEECCCHHHHHHHHHHHHHHHHCCC--CCEEEEEECCCCCCCCCCCCCCCCCC
Q ss_conf 8875460058888632026--8773589841420358889987899997399--97699950332014588875334783
Q gi|254781019|r 80 SSVDQSKSAAIWLHKLLGL--NSSCRVVELKQACYSATCALHMACALVAKSP--ERKVLIVASDVARYDLGSSGEPTQGC 155 (396)
Q Consensus 80 t~~~~~~~~a~~v~~~Lgl--~~~~~~~Di~~aC~g~~~AL~~A~~~i~sg~--~~~aLVV~sD~~~~~~~~~~~~t~Ga 155 (396)
|-+|.+||+.++|||+++- +++++++|..+||||||+||.+|.+||+|+. +|.+||||+||+.|..+ .+|||+||
T Consensus 84 TiiDKSKSVKtVLMQLF~~sGNTDvEGiDt~NACYGGTaALFNa~~WiESssWDGRyalVVagDiAvYa~G-~ARPTGGA 162 (461)
T TIGR01833 84 TIIDKSKSVKTVLMQLFEESGNTDVEGIDTVNACYGGTAALFNAINWIESSSWDGRYALVVAGDIAVYAKG-NARPTGGA 162 (461)
T ss_pred EEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCC-CCCCCHHH
T ss_conf 34100103557767754205795435325534112247999754543212675303412453211134888-98875289
Q ss_pred CEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCC-CCCCEEECCHHHHHHHHHHHHHHHHHHHHH------------CCC
Q ss_conf 0246884268763035310001567865112758-875423566016989999999999999996------------298
Q gi|254781019|r 156 GAVAILISSQTSILEIEDITGIYTNDCMDFWRPN-YRRTALVDGKYSTKIYLQSLEAVWHDYQKN------------KGH 222 (396)
Q Consensus 156 GA~Allv~~~~~~~~~~~~~~~~~~~~~df~rp~-~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~------------~g~ 222 (396)
||+|||||++++++...+.+++||.|.+|||||+ .++||+|||++|.+||+.++..|++.|..| ...
T Consensus 163 GavAmLiGp~APivfe~glR~shM~HaYDFYKPdL~SEYP~VDGklS~~CYl~ALD~cY~~y~~K~~~~~~~~~~~~~~f 242 (461)
T TIGR01833 163 GAVAMLIGPNAPIVFERGLRASHMQHAYDFYKPDLASEYPVVDGKLSIQCYLSALDRCYKSYCKKIEKQLGKSGKDGRKF 242 (461)
T ss_pred HHHHHHHCCCCCEEECCCCCHHHHCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 99999756898887427754122214533368888316850445305878998988888998888998742024467633
Q ss_pred CHHHCCEEEECCCCCHHHHHHHHHHCCH-------------------------------------HHHHHHHHHHHHHHH
Q ss_conf 8211012331145405788888641102-------------------------------------454410013455543
Q gi|254781019|r 223 DFNDFQYFCYHQPFTRMAEKAHIRLSKI-------------------------------------VHQNLSVAEIEKAIG 265 (396)
Q Consensus 223 ~~~did~~v~H~p~~k~~~~~~~~l~~~-------------------------------------~~~~~~~~~~e~~~~ 265 (396)
+++++|++|||.|++|+++|...||+-. .........|++++.
T Consensus 243 ~l~~~dy~vFH~PyCKlVqKS~ARLlyNDF~~~~~~~~~~~~~~~~~~l~~l~~~~ty~drd~EK~~~~~sk~~f~~k~~ 322 (461)
T TIGR01833 243 TLDDFDYMVFHSPYCKLVQKSLARLLYNDFLANPSSETDTALYEVLEALSTLKLEDTYTDRDLEKAFMKISKELFDKKVK 322 (461)
T ss_pred CHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 06344736750773226899999998888763223445566666677653377112002325889999999998861020
Q ss_pred HHHHHHHHCCCCCCCHHHHHHHHHHHHCCC-CCCCCEEEEEEECCCCCEEEEEEEEECC-------HHHHHHCCCHHHHH
Q ss_conf 334445323854323389999999971574-3698889998407983037787786022-------68765203878897
Q gi|254781019|r 266 ITTLYNRLIGNSYTASLYIALISLLDHSSE-NLAGKRVGFFSYGSGCVAEFFSGIVQKN-------YRKKSHQKRHQHII 337 (396)
Q Consensus 266 ~~~~~~~~~GN~~SASi~l~L~slLe~~~~-~~~G~rIll~syGsG~~a~~f~~~v~~~-------~~~~~~~~~~~~~L 337 (396)
|++.++.++|||||||+|-+|+|||.+... .+.|+||++||||||++|+|||++|..+ .+.+....++..+|
T Consensus 323 ~Sl~~~~~~GNMYT~SlYg~laSLL~~~~~~eLaGkRv~~FSYGSGlAAs~FS~~~~~D~~p~S~l~~~~~~~~d~~~~L 402 (461)
T TIGR01833 323 PSLLLPTQVGNMYTASLYGCLASLLSSKSADELAGKRVGLFSYGSGLAASLFSLRVSGDASPGSILDKLIASLSDIKNKL 402 (461)
T ss_pred CEEEECCCCCCCCHHHHHHHHHHHHHCCCHHHHCCCEEEEEECCHHHHHHHEEEEECCCCCCCCHHHHHHHHHHCCHHHH
T ss_conf 00210005786400789999999974078013077569986362455432110145368887641455566552115777
Q ss_pred HCCCCCCHHHHHHHHH-----HCCCCCCC--CCCCCCCCCCCEEEEEEEC-CEEEEEEE
Q ss_conf 4272238999999986-----30688887--6316667888669835655-38998861
Q gi|254781019|r 338 NSRIPISYQVYCDLHQ-----DIIPSVEG--NCTIPHTTTGPFRLATIQN-HKRIYETT 388 (396)
Q Consensus 338 ~~r~~l~~~~y~~~~~-----~~~~~~~~--~~~~~~~~~~~~~l~~i~~-~~R~Y~~~ 388 (396)
++|+.++|++|++.++ +...+|.| .++++...+|+|||++||+ |||.|+++
T Consensus 403 ~~R~~~~P~~f~~~m~~Re~~h~k~nf~P~k~gsi~~L~~GTyYL~~vD~~~RR~Y~~~ 461 (461)
T TIGR01833 403 DSRHCLSPEEFEEAMELREQAHHKKNFTPTKEGSIESLFPGTYYLESVDSLHRRSYKRK 461 (461)
T ss_pred HHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCHHHCCCCCCC
T ss_conf 53321480889999999987303578854767770437896032021123236345789
No 3
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=100.00 E-value=0 Score=656.46 Aligned_cols=375 Identities=33% Similarity=0.479 Sum_probs=354.8
Q ss_pred CCCEEEEEEEECCCEEECHHHHHHHCCCCHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHH--CCHHHCCEEEEEC
Q ss_conf 96206688873489045599999870999879763038324665599859999999999999972--7957868999945
Q gi|254781019|r 1 MAIGIEDISFYTTNQYLDLSVIAEKYRLDVAKFYVGIGQERMSVLNPDEDIVTMAAAAALPIMQN--QDKNLIDTLFFAT 78 (396)
Q Consensus 1 M~vGI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~~lGi~~r~v~~~~Ed~~tmA~~Aa~~~L~~--~~~~~Id~li~~T 78 (396)
|+|||.+|++|+|+++|+++||++.||++++|+.+++|+.+|+|++++||++|||++|++++|++ .||++|++|+++|
T Consensus 1 ~~iGI~~~g~y~p~~~i~~~ela~~~g~d~~k~~~gl~~~e~sv~~~~ED~vTmaveAA~~~l~r~~~D~~~Ig~v~vgT 80 (377)
T COG3425 1 MMIGIVGIGAYIPRYRIKLEELARAWGVDPEKIKKGLGVEEKSVPPWDEDAVTMAVEAARNALKRADIDPSKIGAVIVGS 80 (377)
T ss_pred CCCCCCEEEEECCCEEEEHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCEEEEEC
T ss_conf 95551238885662386099997632888377653004234467997420899999999998751388988966699953
Q ss_pred CCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEE
Q ss_conf 78875460058888632026877358984142035888998789999739997699950332014588875334783024
Q gi|254781019|r 79 ESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACALVAKSPERKVLIVASDVARYDLGSSGEPTQGCGAV 158 (396)
Q Consensus 79 ~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~~~~~~~~t~GaGA~ 158 (396)
||++|.+|++|++||++||++++++++|+++||+++|+||++|.+||.+++++++|||++|++.|.+++..|+|+||||+
T Consensus 81 ES~~d~~K~~at~v~~~lg~~~~~~~~d~~~AC~agT~aL~~a~~~v~s~~~~~~LvI~sD~a~~~~~~~~E~t~GAGav 160 (377)
T COG3425 81 ESGPDAVKPTATIVAEALGLNPSARAADVEFACYAGTAALQAAIGWVESGMISYGLVIGADTAQYAPGDALEYTAGAGAV 160 (377)
T ss_pred CCCCCCCCCHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHCCCCCCCCCCCCCCCEE
T ss_conf 77765444058999998389975120567878998899999999999728755417996311035888656766778608
Q ss_pred EEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCCH
Q ss_conf 68842687630353100015678651127588754235660169899999999999999962988211012331145405
Q gi|254781019|r 159 AILISSQTSILEIEDITGIYTNDCMDFWRPNYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHDFNDFQYFCYHQPFTR 238 (396)
Q Consensus 159 Allv~~~~~~~~~~~~~~~~~~~~~df~rp~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~~did~~v~H~p~~k 238 (396)
||++++++.++++...+++++.|++|||||.+.+||.+||+++..+|++++.++++.++++.|++++||||+||||||+|
T Consensus 161 A~lIg~n~~~~a~~~~~~syt~d~~DFwRp~~~~yp~~dg~~s~~~Y~~~~~~a~~~~~~k~gls~~dfdy~vfH~P~~k 240 (377)
T COG3425 161 AFLIGKNPPIVAEFEGTGSYTTDTPDFWRPDGQPYPYVDGRFSEPAYFKHVENAAKGYMEKTGLSPDDFDYIVFHQPNGK 240 (377)
T ss_pred EEEEECCCCEEEEECCCEEEECCCCCCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHCCCHHHHCEEEECCCCCC
T ss_conf 99980698727872475677457776146689846640763558999999999999999983898455075983179872
Q ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEEEE
Q ss_conf 78888864110245441001345554333444532385432338999999997157436988899984079830377877
Q gi|254781019|r 239 MAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALISLLDHSSENLAGKRVGFFSYGSGCVAEFFSG 318 (396)
Q Consensus 239 ~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~slLe~~~~~~~G~rIll~syGsG~~a~~f~~ 318 (396)
|+++++..++.. ++++.+++.+++++||+||||+|++|+++|++++ ++|||||++|||||+++++||+
T Consensus 241 ~~~ka~k~l~~~----------~e~v~~~l~~~~~vGN~YtgS~~L~Las~Ld~a~--~~G~rIl~~SYGSGa~s~~fs~ 308 (377)
T COG3425 241 FPKKAAKSLGFK----------EEQVKPGLVYPQRIGNTYTGSLLLGLASLLDNAK--LPGDRILLFSYGSGAGSEAFSI 308 (377)
T ss_pred HHHHHHHHHCCC----------HHHCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCC--CCCCEEEEEEECCCCCEEEEEE
T ss_conf 489999985734----------7662843011665275111069999999985267--8888799996078852567888
Q ss_pred EEECCHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCEEEEEEE
Q ss_conf 8602268765203878897427223899999998630688887631666788866983565538998861
Q gi|254781019|r 319 IVQKNYRKKSHQKRHQHIINSRIPISYQVYCDLHQDIIPSVEGNCTIPHTTTGPFRLATIQNHKRIYETT 388 (396)
Q Consensus 319 ~v~~~~~~~~~~~~~~~~L~~r~~l~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~R~Y~~~ 388 (396)
+|++++.++.+...+..+|++|+.+|+.+|+.+++.+.+......... ...+.|+|+.|+++.|+|.+.
T Consensus 309 ~v~~~~~~~~~~~~~~~~l~~R~~ls~~dYe~~~~~~~~~~~~~~~~~-~~~~~~~l~~i~~~~R~y~~~ 377 (377)
T COG3425 309 TVTDGIEERRKKLAPTVLLEQRNRLSYIDYELYFKRRKKIRLGKDNEF-YDSGDYYLEEIDDHFRRYRYV 377 (377)
T ss_pred EECCCHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCC-CCCCCEEEEECCCCCEEEEEC
T ss_conf 961608877650154778876503899999999851343333334455-567746976216772567509
No 4
>KOG1393 consensus
Probab=100.00 E-value=0 Score=569.93 Aligned_cols=391 Identities=29% Similarity=0.470 Sum_probs=355.1
Q ss_pred CCEEEEEEEECCCEEECHHHHHHHCCCCHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHC--CHHHCCEEEEECC
Q ss_conf 62066888734890455999998709998797630383246655998599999999999999727--9578689999457
Q gi|254781019|r 2 AIGIEDISFYTTNQYLDLSVIAEKYRLDVAKFYVGIGQERMSVLNPDEDIVTMAAAAALPIMQNQ--DKNLIDTLFFATE 79 (396)
Q Consensus 2 ~vGI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~~lGi~~r~v~~~~Ed~~tmA~~Aa~~~L~~~--~~~~Id~li~~T~ 79 (396)
+|||.+|..|+|..+|++.||+...|.+.+|++.||||.+|.||.+.||+.+|+.++++++|++. +++.|++|.|+||
T Consensus 11 dvGI~aieiyfP~~yV~Q~elEk~d~vs~gKytIGLGq~~MgfcsdrEDi~Sl~ltvvs~Lmery~i~~~~IGRLEVGTE 90 (462)
T KOG1393 11 DVGIIAIEIYFPSQYVDQEELEKFDGVSAGKYTIGLGQTQMGFCSDREDIISLSLTVVSRLMERYNIDPDSIGRLEVGTE 90 (462)
T ss_pred CCCEEEEEEECCCCCCCHHHHHHCCCCCCCCEEECCCCCEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCEEEECCE
T ss_conf 35426899976756667666762488544625763475121253763320035599999999983898656411773230
Q ss_pred CCCCCCHHHHHHHHHHHC--CCCCCEEEEECCCHHHHHHHHHHHHHHHHCC--CCCEEEEEECCCCCCCCCCCCCCCCCC
Q ss_conf 887546005888863202--6877358984142035888998789999739--997699950332014588875334783
Q gi|254781019|r 80 SSVDQSKSAAIWLHKLLG--LNSSCRVVELKQACYSATCALHMACALVAKS--PERKVLIVASDVARYDLGSSGEPTQGC 155 (396)
Q Consensus 80 t~~~~~~~~a~~v~~~Lg--l~~~~~~~Di~~aC~g~~~AL~~A~~~i~sg--~~~~aLVV~sD~~~~~~~~~~~~t~Ga 155 (396)
|-+|.+||+.+.++++++ .+.++.+.|..+|||||++||.+|.+||+++ .++.+||||+|++.|..+ +.|||+||
T Consensus 91 TiiDKSKSVKt~LMqLF~~sgNtdIEGiDttnACYGGtaALfnavnWiESssWDGr~aivV~gDIAvY~~G-~aRpTGGA 169 (462)
T KOG1393 91 TIIDKSKSVKTVLMQLFEESGNTDIEGIDTTNACYGGTAALFNAVNWIESSSWDGRYAIVVCGDIAVYAKG-NARPTGGA 169 (462)
T ss_pred ECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCC-CCCCCCCC
T ss_conf 02453257999999971013897543443443012338999877655211445774148997337871478-87777873
Q ss_pred CEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCC-CCCCEEECCHHHHHHHHHHHHHHHHHHHHHC--------CCCHHH
Q ss_conf 0246884268763035310001567865112758-8754235660169899999999999999962--------988211
Q gi|254781019|r 156 GAVAILISSQTSILEIEDITGIYTNDCMDFWRPN-YRRTALVDGKYSTKIYLQSLEAVWHDYQKNK--------GHDFND 226 (396)
Q Consensus 156 GA~Allv~~~~~~~~~~~~~~~~~~~~~df~rp~-~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~--------g~~~~d 226 (396)
||+|||++|++++......+++|+.+.+|||+|+ .++||+|||++|.+||+.++..|+..+.+|. +..+++
T Consensus 170 gAVAmLIgPnApi~ferglr~thM~hayDFyKPdl~SEyPvVDGklSi~cYl~Ald~cY~~~~kK~~~~~~~~~~~~l~~ 249 (462)
T KOG1393 170 GAVAMLIGPNAPIIFERGLRATHMQHAYDFYKPDLLSEYPVVDGKLSIQCYLSALDRCYTVYRKKIAAQWQKSGSDNLNS 249 (462)
T ss_pred CEEEEEECCCCCEEECCCCHHHHHHHHHHCCCCCCCCCCCEECCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 35899976998557445303446565430148887786862568021898999999999999999999743356765465
Q ss_pred CCEEEECCCCCHHHHHHHHHHCCHHH--------------------------------HHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 01233114540578888864110245--------------------------------4410013455543334445323
Q gi|254781019|r 227 FQYFCYHQPFTRMAEKAHIRLSKIVH--------------------------------QNLSVAEIEKAIGITTLYNRLI 274 (396)
Q Consensus 227 id~~v~H~p~~k~~~~~~~~l~~~~~--------------------------------~~~~~~~~e~~~~~~~~~~~~~ 274 (396)
||+++||.||.||++|...|++.... .......+.+++.+++.+++++
T Consensus 250 fdy~ifHsP~cKlvqKs~arl~ynDf~~~~~~~~~~~~~~~~~~l~~s~~dr~~ek~~~~~s~~~~~~Kt~~sl~~~~~~ 329 (462)
T KOG1393 250 FDYIIFHSPYCKLVQKSLARLLYNDFLLNPSQLPESAGLESTLKLDESYTDRDLEKAFIKISKPIFKKKTKPSLLAPRRN 329 (462)
T ss_pred CCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCC
T ss_conf 77599857035667877777543144414001542001223333000111047788899876777775135116741247
Q ss_pred CCCCCCHHHHHHHHHHHHC-CCCCCCCEEEEEEECCCCCEEEEEEEEEC----CHHHHHHCCCHHHHHHCCCCCCHHHHH
Q ss_conf 8543233899999999715-74369888999840798303778778602----268765203878897427223899999
Q gi|254781019|r 275 GNSYTASLYIALISLLDHS-SENLAGKRVGFFSYGSGCVAEFFSGIVQK----NYRKKSHQKRHQHIINSRIPISYQVYC 349 (396)
Q Consensus 275 GN~~SASi~l~L~slLe~~-~~~~~G~rIll~syGsG~~a~~f~~~v~~----~~~~~~~~~~~~~~L~~r~~l~~~~y~ 349 (396)
|||||+|+|.+|+++|... ...+.|+||++||||||++|.|||++|.+ -.+......++..+|++|+.+++++|+
T Consensus 330 GNmYTaSly~~l~sll~~~~~d~l~Gkrig~FSYGSGlAAs~fs~~v~~da~p~~k~~~~~~d~~~rL~~R~~~tPe~F~ 409 (462)
T KOG1393 330 GNMYTASLYASLASLLSAVPADELAGKRIGMFSYGSGLAASMFSLRVTQDATPLDKIIASLTDLKKRLDSRKCVTPEEFT 409 (462)
T ss_pred CCCCCHHHHHHHHHHHHCCCHHHHHCCEEEEEEECCCCHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHH
T ss_conf 74224989999999885166044310378899605764120477884588871444567666177776415445889999
Q ss_pred HHHHH-----CCCCCCCCCCCCCCCCCCEEEEEEEC-CEEEEEEECCCCC
Q ss_conf 99863-----06888876316667888669835655-3899886178888
Q gi|254781019|r 350 DLHQD-----IIPSVEGNCTIPHTTTGPFRLATIQN-HKRIYETTNFPDP 393 (396)
Q Consensus 350 ~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~i~~-~~R~Y~~~~~~~~ 393 (396)
+.++- ...++.|.++.+..++|+|||++|++ |||.|.++|.|+.
T Consensus 410 e~melre~~~~~~n~~p~gs~~~Lf~gtyYL~~vd~~~RRsY~~~~~~n~ 459 (462)
T KOG1393 410 EIMELREDTHHKVNFVPQGSIESLFPGTYYLKRVDELHRRSYTLKPEPNN 459 (462)
T ss_pred HHHHHHHHHCCCCCCCCCCCHHHCCCCCEEHHHHHHHHHHCCCCCCCCCC
T ss_conf 99986666302356778883532278715234345776530266789998
No 5
>PRK04262 hypothetical protein; Provisional
Probab=100.00 E-value=0 Score=558.75 Aligned_cols=339 Identities=26% Similarity=0.372 Sum_probs=308.6
Q ss_pred CCCEEEEEEEECCCEEECHHHHHHHCCCCHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHC--CHHHCCEEEEEC
Q ss_conf 962066888734890455999998709998797630383246655998599999999999999727--957868999945
Q gi|254781019|r 1 MAIGIEDISFYTTNQYLDLSVIAEKYRLDVAKFYVGIGQERMSVLNPDEDIVTMAAAAALPIMQNQ--DKNLIDTLFFAT 78 (396)
Q Consensus 1 M~vGI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~~lGi~~r~v~~~~Ed~~tmA~~Aa~~~L~~~--~~~~Id~li~~T 78 (396)
|+|||.++|.|+|+++|+|+||++.+|++++||.+++||++|+|++++||++|||++|+++||+++ +|++||+||++|
T Consensus 1 M~vgI~g~G~YlP~~~v~n~el~~~~~~~~ewI~~rtGI~~R~va~~dE~t~~lA~~AA~~aL~~agi~~~dIdlIi~aT 80 (346)
T PRK04262 1 MMVGIVGYGAYIPRYRIKVEEIARVWGDDPEAIKKGLGVEEKSVPGPDEDTATIAVEAARNALKRAGIDPKEIGAVYVGS 80 (346)
T ss_pred CCCEEEEEEEECCCEEECHHHHHHHHCCCHHHHEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEE
T ss_conf 92179899995899688499999885999647313668507877899999999999999999987599977889899964
Q ss_pred CCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEE
Q ss_conf 78875460058888632026877358984142035888998789999739997699950332014588875334783024
Q gi|254781019|r 79 ESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACALVAKSPERKVLIVASDVARYDLGSSGEPTQGCGAV 158 (396)
Q Consensus 79 ~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~~~~~~~~t~GaGA~ 158 (396)
+||++..|++|++||++||++++|.+||++++|+||++||.+|.+||++|..+++|||++|++++.+++..++++|+||+
T Consensus 81 ~Tpd~~~pstA~~vq~~LGl~~~~~afDi~aaCsGf~~aL~~A~~~I~sg~~~~~LVV~aD~~~~~~~~~~e~~~GaGa~ 160 (346)
T PRK04262 81 ESHPYAVKPTATIVAEALGATPDLTAADLEFACKAGTAALQAAMGLVKSGMIKYALAIGADTAQGAPGDALEYTAAAGGA 160 (346)
T ss_pred CCCCCCCCCHHHHHHHHHCCCCCEEEEEHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEECCCCCEE
T ss_conf 78886676506899998389988059861022114999999999999739997699983133347874056666888769
Q ss_pred EEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEECCHHHH-HHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCC
Q ss_conf 68842687630353100015678651127588754235660169-89999999999999996298821101233114540
Q gi|254781019|r 159 AILISSQTSILEIEDITGIYTNDCMDFWRPNYRRTALVDGKYST-KIYLQSLEAVWHDYQKNKGHDFNDFQYFCYHQPFT 237 (396)
Q Consensus 159 Allv~~~~~~~~~~~~~~~~~~~~~df~rp~~~~~~~~dg~~~~-~~y~~~~~~a~~~~l~~~g~~~~did~~v~H~p~~ 237 (396)
|+++++++....+... ..++.+..|||||.+.+++..+++++. ..|++.++++++++++++|++++|||||||||||.
T Consensus 161 A~~~g~~~~~~~~~~~-~~~~~~~~d~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~did~~v~HQAn~ 239 (346)
T PRK04262 161 AFIIGAEEVIAEIEAT-YSYVTDTPDFWRREGEPYPRHGERFTGEPAYFKHIISAAKGLMEKLGTKPSDYDYAVFHQPNG 239 (346)
T ss_pred EEEECCCCCCEEECCC-CCCCCCCCCCCCCCCCCCCCCCCCEECCEEHHHHHHHHHHHHHHHCCCCHHHCCEEECCCCCH
T ss_conf 9998779973374563-344578742205699824230771625232799999999999998299978858895167657
Q ss_pred HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEEE
Q ss_conf 57888886411024544100134555433344453238543233899999999715743698889998407983037787
Q gi|254781019|r 238 RMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALISLLDHSSENLAGKRVGFFSYGSGCVAEFFS 317 (396)
Q Consensus 238 k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~slLe~~~~~~~G~rIll~syGsG~~a~~f~ 317 (396)
+|++++.+++....+ ++.+.. +.+++|||++||||++|.++|++. ++||||+|+|||+|+.+++|+
T Consensus 240 rii~~~~k~Lgi~~e----------kv~~nl-~~~~~GNTssASiplaL~~~l~~~---k~Gd~Ill~~fG~G~~~~~~~ 305 (346)
T PRK04262 240 KFPLRAAKMLGFTKE----------QVKPGL-LTPYIGNTYSASALLGLAAVLDVA---KPGDRILVVSFGSGAGSDAFS 305 (346)
T ss_pred HHHHHHHHHCCCCHH----------HHHCCC-CHHHHCCCHHHHHHHHHHHHHHCC---CCCCEEEEEEECCCCCEEEEE
T ss_conf 899999998299989----------922342-177647750336999999998438---998999999856973136899
Q ss_pred EEEECCHHHHHHCC-CHHHHHHCCCCCCHHHHHHHHHH
Q ss_conf 78602268765203-87889742722389999999863
Q gi|254781019|r 318 GIVQKNYRKKSHQK-RHQHIINSRIPISYQVYCDLHQD 354 (396)
Q Consensus 318 ~~v~~~~~~~~~~~-~~~~~L~~r~~l~~~~y~~~~~~ 354 (396)
++|++++++..... .++++|++|+.+||++|++++..
T Consensus 306 ~~v~~~~~~~~~~~~~~~~~~~~r~~~~~~~y~~~~~~ 343 (346)
T PRK04262 306 ITVTDRIEEKRDLAPTVEDYLERKKYVDYAVYAKYRGK 343 (346)
T ss_pred EEECHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHCC
T ss_conf 99843578765326268999845730359999986282
No 6
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III; InterPro: IPR004655 Beta-ketoacyl-acyl carrier protein synthase III (FabH), in general, initiates elongation in type II fatty acid synthase systems found in bacteria and plants. It is responsible for producing the multitude of fatty acid structures found in bacterial membranes . The two members of this subfamily from Bacillus subtilis differ from each other, and from FabH from Escherichia coli, in acyl group specificity. Active site residues include Cys112, His244 and Asn274 of Escherichia coli FabH. Cys-112 is the site of acyl group attachment. ; GO: 0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity, 0006633 fatty acid biosynthetic process.
Probab=100.00 E-value=0 Score=442.79 Aligned_cols=298 Identities=21% Similarity=0.221 Sum_probs=257.9
Q ss_pred CCCEEEEEEEECCCEEECHHHHHHHCCCCHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCC--HHHCCEEEEEC
Q ss_conf 9620668887348904559999987099987976303832466559985999999999999997279--57868999945
Q gi|254781019|r 1 MAIGIEDISFYTTNQYLDLSVIAEKYRLDVAKFYVGIGQERMSVLNPDEDIVTMAAAAALPIMQNQD--KNLIDTLFFAT 78 (396)
Q Consensus 1 M~vGI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~~lGi~~r~v~~~~Ed~~tmA~~Aa~~~L~~~~--~~~Id~li~~T 78 (396)
|+++|.++|.|+|+.+++|+||+++..++.|||..+|||++||+|.++|.+.+||++||++||+++. ++|||+|||+|
T Consensus 1 ~~~~i~g~G~YlP~~v~tNadL~k~vDTSDEWI~TRTGI~eRRiAad~E~~S~mg~~AA~~Aie~A~i~~~dID~iivaT 80 (329)
T TIGR00747 1 MKAKILGTGSYLPEKVLTNADLEKMVDTSDEWIVTRTGIKERRIAADDETSSHMGFEAAKKAIENAGISKDDIDLIIVAT 80 (329)
T ss_pred CEEEEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEEEC
T ss_conf 93578986030775135733345321068331123686100021472012689999999999985278866878679805
Q ss_pred CCCCC-CCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCC---CC
Q ss_conf 78875-460058888632026877358984142035888998789999739997699950332014588875334---78
Q gi|254781019|r 79 ESSVD-QSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACALVAKSPERKVLIVASDVARYDLGSSGEPT---QG 154 (396)
Q Consensus 79 ~t~~~-~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~~~~~~~~t---~G 154 (396)
.||++ ..||.|+.||..||+. ++++||+..||.||+|||..|.+||+||.++++|||++|..+...|..+|-| ||
T Consensus 81 ~~pd~l~fPS~Ac~~~~~LGi~-~~~aFD~~AACaGF~Y~Ls~A~~~i~SG~y~~vLvvGaeklSs~~D~~DR~TcvLFG 159 (329)
T TIGR00747 81 TTPDYLAFPSAACMVQAYLGIK-NIPAFDLSAACAGFIYGLSVAKQYIESGKYKTVLVVGAEKLSSTLDWTDRGTCVLFG 159 (329)
T ss_pred CCCCCCCCCCHHHHHHHHCCCC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCEEEEC
T ss_conf 7800003778589999761866-763222365676689999999998615770268899851105536746687579960
Q ss_pred CCEEEEEECCCCCCC--EEEECC----CCCCC--------CCCCCCC---CCCCCCEEECCHHHHHHHHHHHHHHHHHHH
Q ss_conf 302468842687630--353100----01567--------8651127---588754235660169899999999999999
Q gi|254781019|r 155 CGAVAILISSQTSIL--EIEDIT----GIYTN--------DCMDFWR---PNYRRTALVDGKYSTKIYLQSLEAVWHDYQ 217 (396)
Q Consensus 155 aGA~Allv~~~~~~~--~~~~~~----~~~~~--------~~~df~r---p~~~~~~~~dg~~~~~~y~~~~~~a~~~~l 217 (396)
|||.|.++++.+... .+.... |.... ...+|-+ +..+++..|.|+.+|+..++.|.+.+++.+
T Consensus 160 DGAgA~v~g~s~~~~~~eI~~~~l~AdG~~~~~L~l~~~~~~~P~~~~~~~~~~~f~~M~G~evFk~Av~~m~~~~~~~l 239 (329)
T TIGR00747 160 DGAGAVVVGESEDDGGLEIISTNLGADGTQGELLYLPAGGRRCPFSKNTLQGSSPFITMEGNEVFKHAVRKMLKVVEETL 239 (329)
T ss_pred CCCEEEEEECCCCCCCCEEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHH
T ss_conf 67226887045787763012346530564432132067776688777734466661787373258899999999999999
Q ss_pred HHCCCCHHHCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC
Q ss_conf 96298821101233114540578888864110245441001345554333444532385432338999999997157436
Q gi|254781019|r 218 KNKGHDFNDFQYFCYHQPFTRMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALISLLDHSSENL 297 (396)
Q Consensus 218 ~~~g~~~~did~~v~H~p~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~slLe~~~~~~ 297 (396)
++++++.+|||||||||+|-|++++..++|....++ |-.+ +.+++|||+.||||++|.++++ .|++|
T Consensus 240 ~~a~l~~~DiD~lvPHQAN~RIi~a~ak~L~~~~~~----------Vv~T--v~khyGNTSAASiP~AL~E~~~-~G~iK 306 (329)
T TIGR00747 240 EAAGLSKEDIDWLVPHQANIRIIEALAKRLELKESK----------VVKT--VHKHYGNTSAASIPIALDELLE-TGRIK 306 (329)
T ss_pred HHHCCCHHHCCEECCCCHHHHHHHHHHHHHCCCCCC----------EEEE--EECCCCCCHHHHHHHHHHHHHH-CCCCC
T ss_conf 971878304615555411168999999970898031----------6863--2001346304346678999874-17777
Q ss_pred CCCEEEEEEECCCCC
Q ss_conf 988899984079830
Q gi|254781019|r 298 AGKRVGFFSYGSGCV 312 (396)
Q Consensus 298 ~G~rIll~syGsG~~ 312 (396)
+||.+||.+||.|+.
T Consensus 307 ~Gd~~LL~AFGGGLt 321 (329)
T TIGR00747 307 KGDLLLLVAFGGGLT 321 (329)
T ss_pred CCCEEEEEEECHHHH
T ss_conf 244888763060356
No 7
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=0 Score=400.60 Aligned_cols=298 Identities=17% Similarity=0.168 Sum_probs=251.5
Q ss_pred CCCEEEEEEEECCCEEECHHHHHHHCCCCHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCC--HHHCCEEEEEC
Q ss_conf 9620668887348904559999987099987976303832466559985999999999999997279--57868999945
Q gi|254781019|r 1 MAIGIEDISFYTTNQYLDLSVIAEKYRLDVAKFYVGIGQERMSVLNPDEDIVTMAAAAALPIMQNQD--KNLIDTLFFAT 78 (396)
Q Consensus 1 M~vGI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~~lGi~~r~v~~~~Ed~~tmA~~Aa~~~L~~~~--~~~Id~li~~T 78 (396)
|++.|.++|.|+|+.+|+|+||++..+.+++||.+++||++|++++++|++.+||++|+++||++++ |+|||+||++|
T Consensus 2 ~~a~I~g~g~ylP~~~v~n~el~~~~~~~~~~i~~~tGI~~R~~a~~~e~~~~ma~~Aa~~aL~~ag~~~~dIdlli~~t 81 (319)
T PRK09352 2 MYAKILGTGSYLPERVVTNDDLEKMVDTSDEWIVTRTGIKERRIAAPDETTSDLATEAAKKALEAAGIDPEDIDLIIVAT 81 (319)
T ss_pred CCCEEEEEEEECCCCEECHHHHHHHCCCCHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEE
T ss_conf 63389899997899658699999871998899975649458998899999999999999999997598988997999974
Q ss_pred CCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCC---CCCC
Q ss_conf 7887546005888863202687735898414203588899878999973999769995033201458887533---4783
Q gi|254781019|r 79 ESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACALVAKSPERKVLIVASDVARYDLGSSGEP---TQGC 155 (396)
Q Consensus 79 ~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~~~~~~~~---t~Ga 155 (396)
+|+++..|++|++||++||+. +|.+||++++|.||++||++|..++++|..+++|||++|..+..++..++. .+||
T Consensus 82 ~t~d~~~P~~a~~v~~~LGl~-~~~~fDi~~~C~g~~~aL~~A~~~i~~g~~~~~Lvv~~e~~S~~~d~~d~~~~~lfGD 160 (319)
T PRK09352 82 TTPDYLFPSTACLVQARLGAK-NAPAFDLSAACSGFVYALSTADQFIRSGAYKNALVIGAEKLSRIVDWTDRSTCVLFGD 160 (319)
T ss_pred CCCCCCCCHHHHHHHHHHCCC-CCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHCCCCCCCCCCHHEEEECC
T ss_conf 178998966999999997899-9737537434568999999999998669876269961101014245555000166158
Q ss_pred CEEEEEECCCCCCCEEEECCCCCCCCCCCCC---------CCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHH
Q ss_conf 0246884268763035310001567865112---------7588754235660169899999999999999962988211
Q gi|254781019|r 156 GAVAILISSQTSILEIEDITGIYTNDCMDFW---------RPNYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHDFND 226 (396)
Q Consensus 156 GA~Allv~~~~~~~~~~~~~~~~~~~~~df~---------rp~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~~d 226 (396)
||+|+++++.+....+...+.+... ..+.+ +.....+..++|+.++....+.++++++++++++|++++|
T Consensus 161 GAaA~vl~~~~~~~~~~~~~~tdg~-~~~~~~~~~~~~~~~~~~~~~~~m~g~~v~~~a~~~~~~~i~~~L~~~gl~~~d 239 (319)
T PRK09352 161 GAGAVVLEASEEPGILSTHLGSDGS-GGDLLYLPGGGSRGPASGETYLRMEGREVFKFAVREMAKVAREALEAAGLTPED 239 (319)
T ss_pred CCCEEEEEECCCCCEEEEEEEECCC-CCCEEEECCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
T ss_conf 5007999754888736899997488-887589678888898787754676449999999985499999999874998323
Q ss_pred CCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEE
Q ss_conf 01233114540578888864110245441001345554333444532385432338999999997157436988899984
Q gi|254781019|r 227 FQYFCYHQPFTRMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALISLLDHSSENLAGKRVGFFS 306 (396)
Q Consensus 227 id~~v~H~p~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~slLe~~~~~~~G~rIll~s 306 (396)
||||++||++.++.+....++....++ +. ....++|||+|||+|++|..+++ ++++++||+|+|++
T Consensus 240 Id~~i~Hq~~~~~~~~~~~~lgi~~ek----------~~---~~l~~~GNt~sasipi~L~~~~~-~g~lk~Gd~vll~~ 305 (319)
T PRK09352 240 IDWLVPHQANLRIIDATAKKLGLPMEK----------VV---VTVDKYGNTSAASIPLALDEAVR-DGRIKRGDLVLLEG 305 (319)
T ss_pred CCEEEECCCCHHHHHHHHHHCCCCHHH----------HH---HHHHHHCCHHHHHHHHHHHHHHH-CCCCCCCCEEEEEE
T ss_conf 878998267689999999981979888----------56---54875384588789999999998-39999979999999
Q ss_pred ECCCCCEE
Q ss_conf 07983037
Q gi|254781019|r 307 YGSGCVAE 314 (396)
Q Consensus 307 yGsG~~a~ 314 (396)
||+|+...
T Consensus 306 ~G~G~s~~ 313 (319)
T PRK09352 306 FGGGLTWG 313 (319)
T ss_pred EEHHHEEE
T ss_conf 84474317
No 8
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=0 Score=401.31 Aligned_cols=299 Identities=16% Similarity=0.161 Sum_probs=244.1
Q ss_pred CEEEEEEEECCCEEECHHHHHHH-------CCCCHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCC--HHHCCE
Q ss_conf 20668887348904559999987-------099987976303832466559985999999999999997279--578689
Q gi|254781019|r 3 IGIEDISFYTTNQYLDLSVIAEK-------YRLDVAKFYVGIGQERMSVLNPDEDIVTMAAAAALPIMQNQD--KNLIDT 73 (396)
Q Consensus 3 vGI~~i~~y~P~~~v~~~~l~~~-------~g~~~~k~~~~lGi~~r~v~~~~Ed~~tmA~~Aa~~~L~~~~--~~~Id~ 73 (396)
|.|.++|+|+|+.+|+|+||+.. +++.++||.+.+||++|++++++|.+.+||++|+++||++++ |+|||+
T Consensus 1 v~I~~~g~ylP~~~vtn~el~~~~~~~~~~~~~~~~~i~~~tGI~~Rr~a~~~e~~sdma~~Aa~~AL~~agi~p~dIDl 80 (339)
T PRK09258 1 VFINSLAYELAPVVVTSSEIESRLAPLYQRLRIPMGQLEALTGIRERRWWPKGHQLSDGATEAARKALAEAGIDASDIGL 80 (339)
T ss_pred CEEEEEEEECCCCCCCHHHHHHHHCCCHHHHCCCCCHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHCCE
T ss_conf 98989998779961748999977533045425871132334673035367999988999999999999975999899999
Q ss_pred EEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCC------
Q ss_conf 99945788754600588886320268773589841420358889987899997399976999503320145888------
Q gi|254781019|r 74 LFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACALVAKSPERKVLIVASDVARYDLGS------ 147 (396)
Q Consensus 74 li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~~~~------ 147 (396)
||++|+||++..|++|++||++||++++|.+||++.+|+||++||.+|..+|++|..+++|||++|..+...+.
T Consensus 81 lI~at~tpd~~~P~tA~~v~~~LGl~~~~~afDi~~aCsGf~~aL~~A~~~i~sg~~~~~LvV~aE~~s~~~d~~~~~~~ 160 (339)
T PRK09258 81 LINTSVCRDQLEPATACRVHAELGLSKDCAIFDISNACLGFLNGMLDAANMIELGQIDYGLVVSGESARDIVEATIARML 160 (339)
T ss_pred EEEECCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHCC
T ss_conf 99905114853781899999984799874786510431679999999999997699988999975412100244432102
Q ss_pred -------------CCCCCCCCCEEEEEECCCCCCC---EEEECCCCCCCCCCCCC--C--CCCCCCEEECCHHHHHHHHH
Q ss_conf -------------7533478302468842687630---35310001567865112--7--58875423566016989999
Q gi|254781019|r 148 -------------SGEPTQGCGAVAILISSQTSIL---EIEDITGIYTNDCMDFW--R--PNYRRTALVDGKYSTKIYLQ 207 (396)
Q Consensus 148 -------------~~~~t~GaGA~Allv~~~~~~~---~~~~~~~~~~~~~~df~--r--p~~~~~~~~dg~~~~~~y~~ 207 (396)
....++||||+|+++++.+... .+.........+..+.+ . +.......+||...++..++
T Consensus 161 ~~~~~~~~~f~~~~a~~~~GdGA~A~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~ 240 (339)
T PRK09258 161 ADPTMTRQNFAQSLATLTLGSGAVAVVLTRGSLVPRAHRLLGGVTRAATEHHQLCQGGLDEAGHGLMRTDAVLLLKEGVE 240 (339)
T ss_pred CCCCCHHHHCCCCCCCEECCCCEEEEEEECCCCCCCCCEEECCCCCCCCCHHHCCCCCCCCCCCCCEEECHHHHHHHHHH
T ss_conf 46662033302211104216621799995367788886451455457721001024788878765565358999999999
Q ss_pred HHHHHHHHHHHHCCCCHHHCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
Q ss_conf 99999999999629882110123311454057888886411024544100134555433344453238543233899999
Q gi|254781019|r 208 SLEAVWHDYQKNKGHDFNDFQYFCYHQPFTRMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALI 287 (396)
Q Consensus 208 ~~~~a~~~~l~~~g~~~~did~~v~H~p~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~ 287 (396)
.++++++++++++|++++|||+|++||++.++.+...+++....++- .....++|||+|||||++|.
T Consensus 241 ~~~~~~~~~L~~~gl~~~dId~~v~HQan~~~~~~i~~~Lgi~~ek~-------------~~~~~~~GNT~sASiPlaL~ 307 (339)
T PRK09258 241 LAVDTWEAFLQQLGWSVEQVDKVVCHQVGAAHTRAVLKALGIDPEKV-------------FPTFPLLGNMGPVSLPITLA 307 (339)
T ss_pred HHHHHHHHHHHHCCCCHHHCCEEEECCCCHHHHHHHHHHCCCCHHHH-------------HCHHHHHCCHHHHHHHHHHH
T ss_conf 99999999999839998998899862576999999999819687771-------------03186458689899999999
Q ss_pred HHHHHCCCCCCCCEEEEEEECCCCCEEE
Q ss_conf 9997157436988899984079830377
Q gi|254781019|r 288 SLLDHSSENLAGKRVGFFSYGSGCVAEF 315 (396)
Q Consensus 288 slLe~~~~~~~G~rIll~syGsG~~a~~ 315 (396)
.+++ .+++++||+|+|+|||+|+....
T Consensus 308 ~a~~-~g~ik~Gd~vll~~~GaGl~~~~ 334 (339)
T PRK09258 308 MAAE-QGFLKKGDRVALLGIGSGLNCSM 334 (339)
T ss_pred HHHH-CCCCCCCCEEEEEEEEHHHHHHH
T ss_conf 9998-29999979999998847876556
No 9
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=100.00 E-value=0 Score=401.09 Aligned_cols=299 Identities=20% Similarity=0.208 Sum_probs=258.0
Q ss_pred CCCEEEEEEEECCCEEECHHHHHHHCCCCHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCC--HHHCCEEEEEC
Q ss_conf 9620668887348904559999987099987976303832466559985999999999999997279--57868999945
Q gi|254781019|r 1 MAIGIEDISFYTTNQYLDLSVIAEKYRLDVAKFYVGIGQERMSVLNPDEDIVTMAAAAALPIMQNQD--KNLIDTLFFAT 78 (396)
Q Consensus 1 M~vGI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~~lGi~~r~v~~~~Ed~~tmA~~Aa~~~L~~~~--~~~Id~li~~T 78 (396)
|+++|.++|.|+|+..++|+++++..+.+.+||...+||++|+++.++|.+.+||++|+++||++++ |+|||+||++|
T Consensus 2 ~~a~i~g~G~~lP~~~vtn~d~e~~~~tsdewI~~rtGir~R~~a~~~e~~s~la~~Aa~~AL~~Agi~~~dIDlII~aT 81 (323)
T COG0332 2 MNAKILGIGSYLPERVVTNADLEKRVDTSDEWIETRTGIRERRIAADDETTSDLAVEAARKALEDAGISPDDIDLIIVAT 81 (323)
T ss_pred CCCEEEEEEEECCCCCCCHHHHHHCCCCCCCEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEC
T ss_conf 85269988852687655778898536887110553037711231699954778999999999998699989998899966
Q ss_pred CCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCC---CCC
Q ss_conf 78875460058888632026877358984142035888998789999739997699950332014588875334---783
Q gi|254781019|r 79 ESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACALVAKSPERKVLIVASDVARYDLGSSGEPT---QGC 155 (396)
Q Consensus 79 ~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~~~~~~~~t---~Ga 155 (396)
.||++..|++|+.||+.||+.+ |.+||++.+|+||++||.+|..+|++|.++++|||++|+.+..++..+|.| +||
T Consensus 82 ~tpd~~~Ps~A~~vq~~LG~~~-~~afDl~aaCsgf~yaL~~A~~~i~sG~~k~vLVVgae~~S~~ld~~dR~t~vlFgD 160 (323)
T COG0332 82 STPDHLFPSTACLVQARLGLGG-APAFDLQAACSGFLYALSVADGLIRSGGYKNVLVVGAETLSRILDWTDRDTCVLFGD 160 (323)
T ss_pred CCCCCCCCHHHHHHHHHHCCCC-CCEEECHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHCCCCHHHCCCEEEECC
T ss_conf 7866668817999999858998-666660535599999999999999758977799981058404588766561289737
Q ss_pred CEEEEEECCCC-CCCEEEECCCCCCCCCCCCCCCCC----------CCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCH
Q ss_conf 02468842687-630353100015678651127588----------7542356601698999999999999999629882
Q gi|254781019|r 156 GAVAILISSQT-SILEIEDITGIYTNDCMDFWRPNY----------RRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHDF 224 (396)
Q Consensus 156 GA~Allv~~~~-~~~~~~~~~~~~~~~~~df~rp~~----------~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~ 224 (396)
||.|+++++.+ ....+....++......-.+.|.. .....|+|+.+++..++.+++++++.+++++++.
T Consensus 161 GAgAvvl~~~~~~~~i~~~~l~sdg~~~~~l~~~~~~~~~~~~~~~~~~~~m~Gr~vfk~av~~~~~~~~~~L~~~~l~~ 240 (323)
T COG0332 161 GAGAVVLEATEDDNGILDTDLGSDGSQGDLLYLPGGGSATPKEESGGGLLVMDGREVFKFAVRAMPKAIEEVLEKAGLTP 240 (323)
T ss_pred CCEEEEEECCCCCCCEEEEEEECCCCCCCEEECCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCH
T ss_conf 73599983578776623423323566787442267777666444565323544588999999999999999999849998
Q ss_pred HHCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEE
Q ss_conf 11012331145405788888641102454410013455543334445323854323389999999971574369888999
Q gi|254781019|r 225 NDFQYFCYHQPFTRMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALISLLDHSSENLAGKRVGF 304 (396)
Q Consensus 225 ~did~~v~H~p~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~slLe~~~~~~~G~rIll 304 (396)
+|||||++||++.+|.+....++....++- .....++|||++||||++|..+++ .+++++||+|+|
T Consensus 241 ~dId~~vpHQan~ri~~~i~~~l~~~~~k~-------------~~~~~~yGNtsaAsiplaL~~~~~-~g~ik~Gd~vll 306 (323)
T COG0332 241 EDIDWFVPHQANLRIIEAIAKKLGIPEEKV-------------VVTVDKYGNTSAASIPLALDEALR-EGRIKPGDLVLL 306 (323)
T ss_pred HHCCEECCCCCCHHHHHHHHHHCCCCHHHH-------------HHHHHHHCCCCCCHHHHHHHHHHH-HCCCCCCCEEEE
T ss_conf 899887206454999999999829988997-------------568987554632308999998745-089899989999
Q ss_pred EEECCCCCEE
Q ss_conf 8407983037
Q gi|254781019|r 305 FSYGSGCVAE 314 (396)
Q Consensus 305 ~syGsG~~a~ 314 (396)
++||.|+.--
T Consensus 307 ~~fG~Gltwg 316 (323)
T COG0332 307 EAFGGGLTWG 316 (323)
T ss_pred EEECCCCEEE
T ss_conf 9303753213
No 10
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=0 Score=391.60 Aligned_cols=296 Identities=18% Similarity=0.178 Sum_probs=246.0
Q ss_pred CCEEEEEEEECCCEEECHHHHHHHCCCCHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCC--HHHCCEEEEECC
Q ss_conf 620668887348904559999987099987976303832466559985999999999999997279--578689999457
Q gi|254781019|r 2 AIGIEDISFYTTNQYLDLSVIAEKYRLDVAKFYVGIGQERMSVLNPDEDIVTMAAAAALPIMQNQD--KNLIDTLFFATE 79 (396)
Q Consensus 2 ~vGI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~~lGi~~r~v~~~~Ed~~tmA~~Aa~~~L~~~~--~~~Id~li~~T~ 79 (396)
+|+|.++|.|+|+++|+|+||++..|++++|+.+++||++|+++ ++|.+.+||++|+++||++++ |+|||+||++|.
T Consensus 4 ~v~I~g~g~ylP~~~v~n~el~~~~~~~~~~i~~~tGI~~R~~a-~~e~~sdma~~Aa~~aL~~agi~~~dIdliI~~s~ 82 (329)
T PRK07204 4 YISIKGIGTYLPKRKVDSLEIDKMLDVPEGWTLKKAGVKTRYFV-DGETSSYMGAEAAKKAVEDAKLTWDDIDCIICGSG 82 (329)
T ss_pred CEEEEEEEEECCCCEECHHHHHHHCCCCHHHHHHCCCCEEEEEC-CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEECC
T ss_conf 54999999966997285999998809987999762386168557-99985999999999999975989888849999257
Q ss_pred CCCCCCHHHHHHHHHHHCCCCC-CEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCC---CCCCC
Q ss_conf 8875460058888632026877-3589841420358889987899997399976999503320145888753---34783
Q gi|254781019|r 80 SSVDQSKSAAIWLHKLLGLNSS-CRVVELKQACYSATCALHMACALVAKSPERKVLIVASDVARYDLGSSGE---PTQGC 155 (396)
Q Consensus 80 t~~~~~~~~a~~v~~~Lgl~~~-~~~~Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~~~~~~~---~t~Ga 155 (396)
|+++..|++|++||++||++.. +.+||++++|.|+++||.+|..++++|..+++|||++|..+...+..++ +.+||
T Consensus 83 t~d~~~P~~A~~v~~~LGl~~~~~~afDi~~aC~g~~~al~~A~~~i~~g~~~~~Lvv~~e~~S~~~d~~~~~~~~lfGD 162 (329)
T PRK07204 83 TIQQAIPSTASLIQEQLGLQHSGIPCFDINSTCLSFITALDTISYAIECGRYKNVVIISSEISSVGLNWGQNESSILFGD 162 (329)
T ss_pred CCCCCCCCHHHHHHHHHCCCCCCCEEEEHHHHCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCEECC
T ss_conf 89988980999999996478888355003011448999999999998669865258960334554436444331201146
Q ss_pred CEEEEEECCCCCCCEEEECC-CCCC--CCCCCC-----CC-C-------CCCCCEEECCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 02468842687630353100-0156--786511-----27-5-------8875423566016989999999999999996
Q gi|254781019|r 156 GAVAILISSQTSILEIEDIT-GIYT--NDCMDF-----WR-P-------NYRRTALVDGKYSTKIYLQSLEAVWHDYQKN 219 (396)
Q Consensus 156 GA~Allv~~~~~~~~~~~~~-~~~~--~~~~df-----~r-p-------~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~ 219 (396)
||+|+++++.+....+.... .+++ .+..+. +. | .+.....++|+..++...+.+++++++++++
T Consensus 163 GA~A~vl~~~~~~~~il~~~~~t~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~L~~ 242 (329)
T PRK07204 163 GAAAVVITKGDHSSSIIASHMETYSSGAHLSEIRGGGTMIHPREYSEERKEDFLFDMNGRAIFKLSSKYLMKFIDKLLMD 242 (329)
T ss_pred CCEEEEEECCCCCCCEEEEEEEECCCCHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 51489995058888447799765479704411136985478632333346673176057999999986269999999987
Q ss_pred CCCCHHHCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCC
Q ss_conf 29882110123311454057888886411024544100134555433344453238543233899999999715743698
Q gi|254781019|r 220 KGHDFNDFQYFCYHQPFTRMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALISLLDHSSENLAG 299 (396)
Q Consensus 220 ~g~~~~did~~v~H~p~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~slLe~~~~~~~G 299 (396)
+|++++|||||++||++.++.+....++....++- .....++|||+|||+|++|..+++ .+++++|
T Consensus 243 ~gl~~~DId~~i~HQ~n~~~~~~i~~~lgip~ek~-------------~~~~~~~GNt~sasipi~L~~~~~-~g~i~~G 308 (329)
T PRK07204 243 TGYSLADIDLIVPHQASGPAMRLIRKKLGVDEERF-------------MTIFEDYGNMISASIPVALFEAIK-QKKVQRG 308 (329)
T ss_pred CCCCHHHCCEEEEECCCHHHHHHHHHHCCCCHHHH-------------HHHHHHHCCHHHHHHHHHHHHHHH-CCCCCCC
T ss_conf 19997889989981488899999999809697762-------------103631180898889999999998-4999996
Q ss_pred CEEEEEEECCCCC
Q ss_conf 8899984079830
Q gi|254781019|r 300 KRVGFFSYGSGCV 312 (396)
Q Consensus 300 ~rIll~syGsG~~ 312 (396)
|+|+++|||+|+.
T Consensus 309 d~vll~~~GaG~s 321 (329)
T PRK07204 309 NKILLLGTSAGLS 321 (329)
T ss_pred CEEEEEEEEHHHH
T ss_conf 9999999886741
No 11
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=0 Score=391.65 Aligned_cols=310 Identities=19% Similarity=0.148 Sum_probs=241.2
Q ss_pred CCCEEEEEEEECCCEEECHHHHHHHC-------CCCHHHHHHHCCCCEEEEC-----CCCCCHHHHHHHHHHHHHHHCC-
Q ss_conf 96206688873489045599999870-------9998797630383246655-----9985999999999999997279-
Q gi|254781019|r 1 MAIGIEDISFYTTNQYLDLSVIAEKY-------RLDVAKFYVGIGQERMSVL-----NPDEDIVTMAAAAALPIMQNQD- 67 (396)
Q Consensus 1 M~vGI~~i~~y~P~~~v~~~~l~~~~-------g~~~~k~~~~lGi~~r~v~-----~~~Ed~~tmA~~Aa~~~L~~~~- 67 (396)
|+|.|.++|.|+|++.|+|+||++.. ++..+||.+++||++|+++ .++|++.+||++|+++||++++
T Consensus 1 m~v~I~g~G~ylP~~vvtN~el~~~~~~~~~~~~~~~~~I~~rtGI~~Rr~a~~~~~~~~et~sdma~~Aa~~AL~~Agi 80 (378)
T PRK06816 1 MNVYITSTGAFLPGEPVDNDEMEAYLGLINGRPSRLRRIILRNNGIKTRHYAIDPTGETTHSNAQMAAHAIRDLLDDAGF 80 (378)
T ss_pred CCCEEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCC
T ss_conf 96399999997899825589999986415788774888977545821378740788887667899999999999997599
Q ss_pred -HHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCC
Q ss_conf -5786899994578875460058888632026877358984142035888998789999739997699950332014588
Q gi|254781019|r 68 -KNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACALVAKSPERKVLIVASDVARYDLG 146 (396)
Q Consensus 68 -~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~~~ 146 (396)
|+|||+||++|.||++..|++|+.||++||++ +|.+||++++|+||++||.+|..+|++|..+++|||++|+.+..++
T Consensus 81 ~~~dIDliI~aT~tpd~~~P~tA~~Vq~~LGl~-~~~~fDi~~aCsgf~~aL~~A~~~I~sG~~k~vLVV~aE~~S~~l~ 159 (378)
T PRK06816 81 GLEDVELLACGTSQGDQLMPGHAVMVHGELGNP-PCEVVSFHGVCAAGMMALKYAYLSVKAGESSNAVATASELASRLFR 159 (378)
T ss_pred CHHHCCEEEEECCCCCCCCCCHHHHHHHHHCCC-CCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHC
T ss_conf 989999999966868987854899999981899-8540321101237899999999999748988799993440112103
Q ss_pred CC-----------------CC-------CCCCCCEEEEEECCCCCC--CEEE--ECC-CCCCCCCCCCC-----------
Q ss_conf 87-----------------53-------347830246884268763--0353--100-01567865112-----------
Q gi|254781019|r 147 SS-----------------GE-------PTQGCGAVAILISSQTSI--LEIE--DIT-GIYTNDCMDFW----------- 186 (396)
Q Consensus 147 ~~-----------------~~-------~t~GaGA~Allv~~~~~~--~~~~--~~~-~~~~~~~~df~----------- 186 (396)
.. -. +++||||.|+++++.+.. .... +.. .++. +.++.+
T Consensus 160 ~~~~~~~~~~~~~~d~~~~~~f~~~fl~~lfGDGAgA~vl~~~~~~~g~~~~i~~~~~~s~~-~~~~~~~~~G~~~~~~~ 238 (378)
T PRK06816 160 ASRYEAEEERVEELEEGPEIAFEKDFLRWMLSDGAGAVLLENKPRPGGLSLRIDWIDLFSFA-DEFPVCMYAGADKNEDG 238 (378)
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCC-CCCCCCEECCCCCCCCC
T ss_conf 43223211222201244100332001355556666369976438888743454310145545-55663021476667787
Q ss_pred --------CC-----CCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCCHHHHHHHHHHCCHHHH
Q ss_conf --------75-----88754235660169899999999999999962988211012331145405788888641102454
Q gi|254781019|r 187 --------RP-----NYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHDFNDFQYFCYHQPFTRMAEKAHIRLSKIVHQ 253 (396)
Q Consensus 187 --------rp-----~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~~did~~v~H~p~~k~~~~~~~~l~~~~~~ 253 (396)
.| .+.....+|++..++.....+++.++++++++|++++|||+||+||++.+|.+.+.+++.+.. -
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~L~~~gl~~~dId~~vpHQAn~ri~~~v~~~l~~~g-~ 317 (378)
T PRK06816 239 ELKGWSDYSPAEAEAAGALALKQDVRLLNEVIVVWGVDPYLELVDKRRLDPDAIDHFLPHYSSEYFREKIVELLAKAG-L 317 (378)
T ss_pred CCCCCCCCCHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEECCCCHHHHHHHHHHHHHHCC-C
T ss_conf 657744478777753354011125899999999999999999999849998998888126105999999999987535-8
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCC-CCEEEEEEEEE
Q ss_conf 410013455543334445323854323389999999971574369888999840798-30377877860
Q gi|254781019|r 254 NLSVAEIEKAIGITTLYNRLIGNSYTASLYIALISLLDHSSENLAGKRVGFFSYGSG-CVAEFFSGIVQ 321 (396)
Q Consensus 254 ~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~slLe~~~~~~~G~rIll~syGsG-~~a~~f~~~v~ 321 (396)
.+. ++++ .....++|||++||||++|..+++ ++++++||+|+|++.||| ...-...++|+
T Consensus 318 ~ip----~ek~---~~~v~~~GNT~sASiPiaL~~a~~-~g~ik~Gd~vll~~~~sg~~~~g~~ll~~~ 378 (378)
T PRK06816 318 MIP----EEKW---FTNLATVGNTGSASIFIMLDELFR-SGRLKPGQTILCFVPESGRFSAAFMLLTVV 378 (378)
T ss_pred CCC----HHHH---EECCCCCCCHHHHHHHHHHHHHHH-CCCCCCCCEEEEEECCCCCHHHEEEEEEEC
T ss_conf 998----6661---601423270799999999999998-499999999999962476761546999979
No 12
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=0 Score=386.81 Aligned_cols=298 Identities=17% Similarity=0.163 Sum_probs=250.0
Q ss_pred CEEEEEEEECCCEEECHHHHHHHCCCCHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCC--HHHCCEEEEECCC
Q ss_conf 20668887348904559999987099987976303832466559985999999999999997279--5786899994578
Q gi|254781019|r 3 IGIEDISFYTTNQYLDLSVIAEKYRLDVAKFYVGIGQERMSVLNPDEDIVTMAAAAALPIMQNQD--KNLIDTLFFATES 80 (396)
Q Consensus 3 vGI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~~lGi~~r~v~~~~Ed~~tmA~~Aa~~~L~~~~--~~~Id~li~~T~t 80 (396)
+-|.++|.|+|+.+|+++|+++..|.+.+|+.+++||++|++++++|++.+||++|+++||++++ |+|||+||++|+|
T Consensus 5 ~~I~g~g~ylP~~~v~n~~~~~~~~~~~~~i~~~~Gi~~R~~a~~~e~~~dma~~Aa~~aL~~ag~~~~dIdllI~~t~~ 84 (326)
T PRK12879 5 ARITGWGKYVPPRVLTNDDLATFIDTSDEWIVQRTGIKERRIAHVNEFTSDLAIKAAERALARAGLDASDIDLIIVATTT 84 (326)
T ss_pred CEEEEEEEECCCCEECHHHHHHHHCCCHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCC
T ss_conf 78999999889965859999988099888998644964899889999999999999999999759798899699995267
Q ss_pred CCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCC---CCCCCCE
Q ss_conf 8754600588886320268773589841420358889987899997399976999503320145888753---3478302
Q gi|254781019|r 81 SVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACALVAKSPERKVLIVASDVARYDLGSSGE---PTQGCGA 157 (396)
Q Consensus 81 ~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~~~~~~~---~t~GaGA 157 (396)
+++..|++|++||++||++ +|.+||++++|+|+++||++|.+++++++.+++|||++|..+...+..++ +.+||||
T Consensus 85 ~d~~~P~~a~~v~~~LGl~-~~~~fdi~~~C~g~~~aL~~A~~~i~~g~~~~~Lvv~~e~~s~~~d~~~~~~~~lfGDGA 163 (326)
T PRK12879 85 PDYLFPSTASQVQARLGIP-NAAAFDINAACSGFLYGLELANGLITSGSYKKVLVIGAERLSKYTDWTDRTTAILFGDGA 163 (326)
T ss_pred CCCCCCHHHHHHHHHHCCC-CCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHCCCCCCCCCHHHHHCCCCCC
T ss_conf 8982775999999986849-951454012203799999999999866875503650202213532435433321017863
Q ss_pred EEEEECCCCCCCEEE-ECCCCCCCCCCCCCC-------------CCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 468842687630353-100015678651127-------------588754235660169899999999999999962988
Q gi|254781019|r 158 VAILISSQTSILEIE-DITGIYTNDCMDFWR-------------PNYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHD 223 (396)
Q Consensus 158 ~Allv~~~~~~~~~~-~~~~~~~~~~~df~r-------------p~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~ 223 (396)
+|+++++++....+. ....+.. +..+++. .....+..++|+..+....+.+++.+++++++.|++
T Consensus 164 aA~ll~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~L~~~gl~ 242 (326)
T PRK12879 164 GAVVVEATEEPPGLIDYVLGTDG-DGGDILYRTGLGTTMDRFDLDNGGFYFQFNGREVFKWAVRGMPKAAKQVLEKAGLT 242 (326)
T ss_pred EEEEEEECCCCCCEEEEEEEECC-CCCCEEEECCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 38998724888834789998537-77665883478876887553356750786429999999875699999999985999
Q ss_pred HHHCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEEE
Q ss_conf 21101233114540578888864110245441001345554333444532385432338999999997157436988899
Q gi|254781019|r 224 FNDFQYFCYHQPFTRMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALISLLDHSSENLAGKRVG 303 (396)
Q Consensus 224 ~~did~~v~H~p~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~slLe~~~~~~~G~rIl 303 (396)
++||||+++||++.++.+....++....++. . ...+++|||+|+|+|++|..+++ .+++++||+|+
T Consensus 243 ~~did~~i~Hq~~~~~~~~i~~~Lgl~~~k~----------~---~~l~~~GN~~sasi~~~L~~~~~-~g~l~~Gd~vl 308 (326)
T PRK12879 243 KDDIDWVIPHQANLRIIESLCEKLGIPLEKT----------L---VNVEYYGNTSAATIPLALCLALE-QGKIKPGDTLL 308 (326)
T ss_pred HHHCCEEEECCCCHHHHHHHHHHCCCCHHHH----------H---HHHHCCCCHHHHHHHHHHHHHHH-CCCCCCCCEEE
T ss_conf 7788989986887899999999809798885----------6---56732274377789999999997-39999969999
Q ss_pred EEEECCCCCEEEE
Q ss_conf 9840798303778
Q gi|254781019|r 304 FFSYGSGCVAEFF 316 (396)
Q Consensus 304 l~syGsG~~a~~f 316 (396)
++|||+|......
T Consensus 309 l~~~G~G~s~~~~ 321 (326)
T PRK12879 309 LYGFGAGLTWAAL 321 (326)
T ss_pred EEEECHHHHHEEE
T ss_conf 9999167322489
No 13
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=100.00 E-value=0 Score=386.62 Aligned_cols=295 Identities=19% Similarity=0.193 Sum_probs=244.5
Q ss_pred CEEEEEEEECCCEEECHHHHHHHCCCCHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCC--HHHCCEEEEECCC
Q ss_conf 20668887348904559999987099987976303832466559985999999999999997279--5786899994578
Q gi|254781019|r 3 IGIEDISFYTTNQYLDLSVIAEKYRLDVAKFYVGIGQERMSVLNPDEDIVTMAAAAALPIMQNQD--KNLIDTLFFATES 80 (396)
Q Consensus 3 vGI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~~lGi~~r~v~~~~Ed~~tmA~~Aa~~~L~~~~--~~~Id~li~~T~t 80 (396)
|+|.++|.|+|+++|+|+||++..+.+++||.+++||++|++++++|++.+||++|+++||++++ |++||+||++|+|
T Consensus 1 v~I~g~g~ylP~~~v~n~e~~~~~~~~~~~i~~~tGI~~R~~~~~~e~~sdma~~Aa~~aL~~ag~~~~dIDllI~~t~t 80 (327)
T CHL00203 1 VHILSTGSSVPNFSIENQQFSQIVETSDEWISTRTGIKKRRLAGSSTSLTKLAAEAANKALHKAGWSAKDIDLIILATST 80 (327)
T ss_pred CEEEEEEEECCCCEECHHHHHHHCCCCHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCC
T ss_conf 97999999789917849999987299868885457940797789999999999999999997549997898889995004
Q ss_pred CCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCC---CCCCCCE
Q ss_conf 8754600588886320268773589841420358889987899997399976999503320145888753---3478302
Q gi|254781019|r 81 SVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACALVAKSPERKVLIVASDVARYDLGSSGE---PTQGCGA 157 (396)
Q Consensus 81 ~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~~~~~~~---~t~GaGA 157 (396)
|++ .+++|++||+.||+. ++.+||++++|.||++||.+|..+|++|..+++|||++|..+...+..++ +++||||
T Consensus 81 pd~-~~~~a~~v~~~LG~~-~~~afDv~~aC~g~~~al~~A~~~i~sg~~~~~LvV~~E~~S~~~~~~~~~~~~~fGDgA 158 (327)
T CHL00203 81 PDD-LFGSASQLQAEIGAT-QAVAFDITAACSGFIFALVTAGQFIQSGSYRNILIIGADTLSRWIDWSDRRTCILFGDGA 158 (327)
T ss_pred CCC-CCCHHHHHHHHHCCC-CCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHCCCCC
T ss_conf 676-787699999985899-863765520044799999999999856984514785143235765646454531137852
Q ss_pred EEEEECCCCCC----CEEEECC-CCCCCCCCCC-CC------------CC-CCCCEEECCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 46884268763----0353100-0156786511-27------------58-87542356601698999999999999999
Q gi|254781019|r 158 VAILISSQTSI----LEIEDIT-GIYTNDCMDF-WR------------PN-YRRTALVDGKYSTKIYLQSLEAVWHDYQK 218 (396)
Q Consensus 158 ~Allv~~~~~~----~~~~~~~-~~~~~~~~df-~r------------p~-~~~~~~~dg~~~~~~y~~~~~~a~~~~l~ 218 (396)
+|+++++.|.. +.+.... +... +...+ +. |. ...+..++|+..++...+.++..++++++
T Consensus 159 ~A~il~~~~~~~~~~l~~~~~tdg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~ 237 (327)
T CHL00203 159 GAVAIGECPTEENSILGFKLCTDGSLN-SHLQLMNKPDNMQLFNQTKYPMGGFNSISMNGKEVYKFAVFQVPAVIQECLN 237 (327)
T ss_pred EEEEEEECCCCCCCEEEEEEEECCCCC-CEEEEECCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHH
T ss_conf 489874046777844789998667777-6178724787766567665667885427875599999999999999999998
Q ss_pred HCCCCHHHCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCC
Q ss_conf 62988211012331145405788888641102454410013455543334445323854323389999999971574369
Q gi|254781019|r 219 NKGHDFNDFQYFCYHQPFTRMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALISLLDHSSENLA 298 (396)
Q Consensus 219 ~~g~~~~did~~v~H~p~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~slLe~~~~~~~ 298 (396)
++|++++|||+|++||++.++.+....++....++.. ....++|||+|||||++|..+++ ++++++
T Consensus 238 ~~g~~~~did~~v~HQ~~~~~~~~i~~~lgl~~~k~~-------------~~~~~~GNt~sasip~~L~~~~~-~g~l~~ 303 (327)
T CHL00203 238 ALNISIDEVDWLLLHQANQRILEAVADRLSIPHSKMI-------------TNLEHYGNTSAASIPLALDEAIK-DNKIQP 303 (327)
T ss_pred HCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCHHHHH-------------HHHHHHCCHHHHHHHHHHHHHHH-CCCCCC
T ss_conf 7699811188799886889999999998197978866-------------54764496688899999999998-499999
Q ss_pred CCEEEEEEECCCCCEE
Q ss_conf 8889998407983037
Q gi|254781019|r 299 GKRVGFFSYGSGCVAE 314 (396)
Q Consensus 299 G~rIll~syGsG~~a~ 314 (396)
||+|+|+|||+|+..-
T Consensus 304 Gd~vll~g~G~G~s~g 319 (327)
T CHL00203 304 GQIIVLSGFGAGLTWG 319 (327)
T ss_pred CCEEEEEEEEHHHHHE
T ss_conf 8999999985572026
No 14
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=0 Score=389.12 Aligned_cols=295 Identities=19% Similarity=0.206 Sum_probs=233.5
Q ss_pred CCEEEEEEEECCCEEECHHHHHHH------------------------CCCCHHHHHHHCCCCEEEECCC----------
Q ss_conf 620668887348904559999987------------------------0999879763038324665599----------
Q gi|254781019|r 2 AIGIEDISFYTTNQYLDLSVIAEK------------------------YRLDVAKFYVGIGQERMSVLNP---------- 47 (396)
Q Consensus 2 ~vGI~~i~~y~P~~~v~~~~l~~~------------------------~g~~~~k~~~~lGi~~r~v~~~---------- 47 (396)
||.|.++|.|+|+++|+|+||.+. ...+.+||.+++||++|+++..
T Consensus 2 n~~I~g~G~y~P~~vvtN~dl~~~~~~~~~~~~~~~~~~~~~~~~e~~vdtsdeWI~~rtGI~~R~i~~~~g~~~~~~~~ 81 (372)
T PRK07515 2 NVVISGTGLYTPPESISNEELVESFNAYVDQFNAENAAAIEAGEVEALPPSSSEFIEKASGIKSRYVMEKEGILDPERMR 81 (372)
T ss_pred CCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCEEEEEEECCCCCCCCHHCC
T ss_conf 61999978877995104899998776555442000033321343102556756776642464677752356766600014
Q ss_pred --------CC--CHHHHHHHHHHHHHHHCC--HHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHH
Q ss_conf --------85--999999999999997279--578689999457887546005888863202687735898414203588
Q gi|254781019|r 48 --------DE--DIVTMAAAAALPIMQNQD--KNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSAT 115 (396)
Q Consensus 48 --------~E--d~~tmA~~Aa~~~L~~~~--~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~ 115 (396)
+| ++.+||++|+++||++++ |+|||+||++|+||++..|++|+.||++||+. ..+||++.||+||+
T Consensus 82 p~~~~~~~d~~~~~sdma~~AA~~AL~~Agi~~~dIDlIIvaT~tpd~~~PstA~~vq~~LG~~--~~afDi~aaCsGfv 159 (372)
T PRK07515 82 PRIPERSNDELSIQAEMGVAAARQALERAGKTAADIDGVIVACSNMQRAYPAMAIEIQEALGIE--GFAFDMNVACSSAT 159 (372)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCCCCCCCCCHHHHHHHHHCCC--CEEHHHHCCCHHHH
T ss_conf 3333456643113799999999999998499989999999976888888972999999984898--42043614086899
Q ss_pred HHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCC---CCCCCEEEEEECCCCCCC-----EEEEC--CCCCCCCC---
Q ss_conf 899878999973999769995033201458887533---478302468842687630-----35310--00156786---
Q gi|254781019|r 116 CALHMACALVAKSPERKVLIVASDVARYDLGSSGEP---TQGCGAVAILISSQTSIL-----EIEDI--TGIYTNDC--- 182 (396)
Q Consensus 116 ~AL~~A~~~i~sg~~~~aLVV~sD~~~~~~~~~~~~---t~GaGA~Allv~~~~~~~-----~~~~~--~~~~~~~~--- 182 (396)
+||.+|.++|++|..+++|||++|..+..++..++. .+||||.|+++++.+... .+... ...+....
T Consensus 160 yaL~~A~~~I~sg~~k~vLVVgaE~~S~~~d~~DR~t~~LFGDGAgAvvle~~~~~~~~~~~~il~~~~~t~~s~~i~~~ 239 (372)
T PRK07515 160 FGIQTAANAIRSGSARRVLVVNPEICSGHLNFRDRDSHFIFGDVATAVIVERADTATSAGGFEILSTRLFTQFSNNIRNN 239 (372)
T ss_pred HHHHHHHHHHHCCCCCEEEEECCHHHCCCCCCCCCCCEEEECCCCEEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCC
T ss_conf 99999999997189874799534230336276787704776165302466411468887774156656346656664457
Q ss_pred CCCC-------CCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCCHHHHHHHHHHCC-HHHHH
Q ss_conf 5112-------758875423566016989999999999999996298821101233114540578888864110-24544
Q gi|254781019|r 183 MDFW-------RPNYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHDFNDFQYFCYHQPFTRMAEKAHIRLSK-IVHQN 254 (396)
Q Consensus 183 ~df~-------rp~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~~did~~v~H~p~~k~~~~~~~~l~~-~~~~~ 254 (396)
..+. .+....+..|+|+.+++..++.+++.++++++++|++++|||+|++||+|.+|++...+++.. ....
T Consensus 240 ~g~~~~~~~~~~~~~~~~~~m~G~~Vfk~av~~~~~~i~~~L~~~gl~~~DId~~v~HQAN~rii~~i~k~llg~~~~~- 318 (372)
T PRK07515 240 FGFLNRAEPEGAGDADKLFVQEGRKVFKEVCPMVAEHIVEHLAENGLTPADVKRLWLHQANINMNQLIGKKVLGRDATP- 318 (372)
T ss_pred CCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCEEEECCCCHHHHHHHHHHHCCCCCCH-
T ss_conf 8866767767887633111441789999999999999999999829898889999867789999999999854589998-
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCC
Q ss_conf 1001345554333444532385432338999999997157436988899984079830
Q gi|254781019|r 255 LSVAEIEKAIGITTLYNRLIGNSYTASLYIALISLLDHSSENLAGKRVGFFSYGSGCV 312 (396)
Q Consensus 255 ~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~slLe~~~~~~~G~rIll~syGsG~~ 312 (396)
++. .....++|||+|||||++|.. ..+++++||+|+|++||+|+.
T Consensus 319 ------~k~----~~~i~~yGNTssASiplaL~~---~~~~ik~Gd~vll~gfGaGlt 363 (372)
T PRK07515 319 ------EEA----PVILDEYANTSSAGSIIAFHK---HSDDLAAGDLGVICSFGAGYS 363 (372)
T ss_pred ------HHH----EEHHHHCCCHHHHHHHHHHHH---HHCCCCCCCEEEEEEEEHHHH
T ss_conf ------883----220741184788899999999---848678999899999877985
No 15
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=100.00 E-value=0 Score=384.05 Aligned_cols=294 Identities=18% Similarity=0.149 Sum_probs=243.5
Q ss_pred CEEEEEEEECCCEEECHHHHHHHCCCCHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCC--HHHCCEEEEECCC
Q ss_conf 20668887348904559999987099987976303832466559985999999999999997279--5786899994578
Q gi|254781019|r 3 IGIEDISFYTTNQYLDLSVIAEKYRLDVAKFYVGIGQERMSVLNPDEDIVTMAAAAALPIMQNQD--KNLIDTLFFATES 80 (396)
Q Consensus 3 vGI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~~lGi~~r~v~~~~Ed~~tmA~~Aa~~~L~~~~--~~~Id~li~~T~t 80 (396)
-.|.++|.|+|+++|+|+||++..|++++||.+++||++|+++.++|++.+||++|+++||++++ |+|||+||++|+|
T Consensus 5 ~rI~g~G~ylP~~~v~n~el~~~~~~~~~~i~~~tGI~~R~~~~~~e~~~~ma~~Aa~~aL~~agi~~~dIdllI~~t~t 84 (327)
T PRK05963 5 SRIAGFGHAVPDRRVENAEIEAQLGLETGWIERRTGIRCRRWAMPDETLSHLAASAADMALADAGIERSDIALTLLATST 84 (327)
T ss_pred CEEEEEEEECCCCEECHHHHHHHHCCCHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEEEC
T ss_conf 77999999679937839999988299979977536933799889999999999999999999759898998799998607
Q ss_pred CCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCC---CCCCCCE
Q ss_conf 8754600588886320268773589841420358889987899997399976999503320145888753---3478302
Q gi|254781019|r 81 SVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACALVAKSPERKVLIVASDVARYDLGSSGE---PTQGCGA 157 (396)
Q Consensus 81 ~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~~~~~~~---~t~GaGA 157 (396)
+++..|++|++||++||++ +|.+||++++|.||++||++|..+++++. +++|||++|..+...+..++ +.+||||
T Consensus 85 ~d~~~P~~A~~v~~~LGl~-~~~~fDi~~aC~g~~~al~~A~~~i~~~~-~~vLvv~~e~~S~~~~~~d~~~~~lfgDgA 162 (327)
T PRK05963 85 PDHLLPPTAPLLAHWLGLQ-NSGAADLAGACTGFLYALVLADGFVRAQG-KPVLVVAANILSRRINMAERASAVLFADAA 162 (327)
T ss_pred CCCCCCCHHHHHHHHHCCC-CCEEEEHHHHHHHHHHHHHHHHHHHHHCC-CEEEEEEEHHHCCCCCCHHHHHHHHCCCCC
T ss_conf 9998970999999985778-61143597668999999999999997348-637996410210358801233432304700
Q ss_pred EEEEECCCCCCC--EEEECCCCCCCCC-------CCCCCCCCC-------CCEEECCHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 468842687630--3531000156786-------511275887-------542356601698999999999999999629
Q gi|254781019|r 158 VAILISSQTSIL--EIEDITGIYTNDC-------MDFWRPNYR-------RTALVDGKYSTKIYLQSLEAVWHDYQKNKG 221 (396)
Q Consensus 158 ~Allv~~~~~~~--~~~~~~~~~~~~~-------~df~rp~~~-------~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g 221 (396)
+|+++++.+... .+.....+..... ....+|... .....+|+..++..++.+++++++.+++.|
T Consensus 163 ~A~vl~~~~~~~~g~l~~~~~td~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~L~~~g 242 (327)
T PRK05963 163 GAVVLAPSAKANSGVLGSQLISDGSHYDLIQIPAGGSARPYAPERDASEFLMTMQDGRAVFTEAVRMMTGASQNVLASAA 242 (327)
T ss_pred CEEEEECCCCCCCCEEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 06898415788874466898643787663885579867888876666655247517499999999852999999999849
Q ss_pred CCHHHCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCE
Q ss_conf 88211012331145405788888641102454410013455543334445323854323389999999971574369888
Q gi|254781019|r 222 HDFNDFQYFCYHQPFTRMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALISLLDHSSENLAGKR 301 (396)
Q Consensus 222 ~~~~did~~v~H~p~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~slLe~~~~~~~G~r 301 (396)
++++|||+|++||++.++.+...+++....++- .....++|||+|||||++|..+++ .+++++||+
T Consensus 243 l~~~dId~~v~HQ~n~~~~~~v~~~lgl~~ek~-------------~~~~~~~GNt~sAsipiaL~~a~~-~g~l~~Gd~ 308 (327)
T PRK05963 243 MLPQDIDRFFPHQANARIVDKVCETLGIPRAKA-------------ASTIETYGNSSAATIPLSLSLANL-EQPLREGER 308 (327)
T ss_pred CCHHHCCEEEECCCCHHHHHHHHHHCCCCHHHH-------------HHHHHHHCCHHHHHHHHHHHHHHH-CCCCCCCCE
T ss_conf 982228889986799899999999829797870-------------302751392488899999999998-299999799
Q ss_pred EEEEEECCCCC
Q ss_conf 99984079830
Q gi|254781019|r 302 VGFFSYGSGCV 312 (396)
Q Consensus 302 Ill~syGsG~~ 312 (396)
|+|+|||+|+.
T Consensus 309 vll~g~G~G~s 319 (327)
T PRK05963 309 LLFAAAGAGMT 319 (327)
T ss_pred EEEEEEEHHHH
T ss_conf 99999866863
No 16
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=100.00 E-value=0 Score=382.73 Aligned_cols=296 Identities=19% Similarity=0.216 Sum_probs=249.1
Q ss_pred CCEEEEEEEECCCEEECHHHHHHHCCCCHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHC--CHHHCCEEEEECC
Q ss_conf 62066888734890455999998709998797630383246655998599999999999999727--9578689999457
Q gi|254781019|r 2 AIGIEDISFYTTNQYLDLSVIAEKYRLDVAKFYVGIGQERMSVLNPDEDIVTMAAAAALPIMQNQ--DKNLIDTLFFATE 79 (396)
Q Consensus 2 ~vGI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~~lGi~~r~v~~~~Ed~~tmA~~Aa~~~L~~~--~~~~Id~li~~T~ 79 (396)
++.|.++|.|+|+++++++++++..|++++|+.+.+||++|++++++|++.+||++|+++||+++ +|++||+||++|+
T Consensus 1 ~~~I~~~g~y~P~~~v~n~~~~~~~g~~~~~i~~~~Gi~~R~~a~~~e~~~~ma~~Aa~~aL~~ag~~~~dIdlli~~s~ 80 (320)
T cd00830 1 NARILGIGSYLPERVVTNDELEKRLDTSDEWIRTRTGIRERRIADPGETTSDLAVEAAKKALEDAGIDADDIDLIIVATS 80 (320)
T ss_pred CCEEEEEEEECCCCEECHHHHHHHHCCCHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECC
T ss_conf 97899999977993784999998869898999870297489988999999999999999999866989567888999415
Q ss_pred CCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCC---CCCCCC
Q ss_conf 88754600588886320268773589841420358889987899997399976999503320145888753---347830
Q gi|254781019|r 80 SSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACALVAKSPERKVLIVASDVARYDLGSSGE---PTQGCG 156 (396)
Q Consensus 80 t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~~~~~~~---~t~GaG 156 (396)
|+++..|+++++||++||++ +|.+||++++|+|+++||++|..++++|+.+++|||++|..+...+..++ +.+|||
T Consensus 81 ~~~~~~P~~a~~v~~~LGl~-~~~~fdi~~~C~g~~~aL~~A~~~i~~g~~~~~Lvv~~e~~s~~~~~~~~~~~~lfGDg 159 (320)
T cd00830 81 TPDYLFPATACLVQARLGAK-NAAAFDINAACSGFLYGLSTAAGLIRSGGAKNVLVVGAETLSRILDWTDRSTAVLFGDG 159 (320)
T ss_pred CCCCCCCCHHHHHHHHHCCC-CCCEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECHHHCCCCCCCCCCHHHCCCCC
T ss_conf 68986883999999996889-97225104551158999999999985598761699841342255454662111103786
Q ss_pred EEEEEECCCCCCCEEE-ECCCCCCCCCCCCC-------------CCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 2468842687630353-10001567865112-------------758875423566016989999999999999996298
Q gi|254781019|r 157 AVAILISSQTSILEIE-DITGIYTNDCMDFW-------------RPNYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGH 222 (396)
Q Consensus 157 A~Allv~~~~~~~~~~-~~~~~~~~~~~df~-------------rp~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~ 222 (396)
|+|+++++.+....+. ....+... ..+.+ ......+..++|+..+....+.+++++++++++.|+
T Consensus 160 aaA~ll~~~~~~~~i~~~~~~t~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~~~L~~~g~ 238 (320)
T cd00830 160 AGAVVLEATEEDPGILDSVLGSDGS-GADLLTIPAGGSRSPFEDAEGGDPYLVMDGREVFKFAVRLMPESIEEALEKAGL 238 (320)
T ss_pred CEEEEEEECCCCCCEEEEEEEEECC-CCCEEEECCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 3489996248888424689997068-865268458976677643335676179732899998876569999999998599
Q ss_pred CHHHCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEE
Q ss_conf 82110123311454057888886411024544100134555433344453238543233899999999715743698889
Q gi|254781019|r 223 DFNDFQYFCYHQPFTRMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALISLLDHSSENLAGKRV 302 (396)
Q Consensus 223 ~~~did~~v~H~p~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~slLe~~~~~~~G~rI 302 (396)
+++|||||++||++.++.+....++....++. . ...+++|||+|+|+|++|..+++ .+++++||+|
T Consensus 239 ~~~did~~v~Hq~~~~~~~~~~~~lgi~~~k~----------~---~~~~~~GN~~sasi~~~L~~~~~-~g~l~~Gd~v 304 (320)
T cd00830 239 TPDDIDWFVPHQANLRIIEAVAKRLGLPEEKV----------V---VNLDRYGNTSAASIPLALDEAIE-EGKLKKGDLV 304 (320)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHCCCHHHH----------H---HHHHHCCCHHHHHHHHHHHHHHH-CCCCCCCCEE
T ss_conf 91016579970687899999999809698996----------7---56851075587689999999997-4999985999
Q ss_pred EEEEECCCCCE
Q ss_conf 99840798303
Q gi|254781019|r 303 GFFSYGSGCVA 313 (396)
Q Consensus 303 ll~syGsG~~a 313 (396)
+++|||+|+..
T Consensus 305 ll~~~G~G~s~ 315 (320)
T cd00830 305 LLLGFGAGLTW 315 (320)
T ss_pred EEEEECHHHHH
T ss_conf 99998045325
No 17
>PRK06840 hypothetical protein; Validated
Probab=100.00 E-value=0 Score=378.77 Aligned_cols=296 Identities=18% Similarity=0.153 Sum_probs=235.1
Q ss_pred CCCEEEEEEEECCCEEECHHHHHHHCCCCHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCC--HHHCCEEE-EE
Q ss_conf 9620668887348904559999987099987976303832466559985999999999999997279--57868999-94
Q gi|254781019|r 1 MAIGIEDISFYTTNQYLDLSVIAEKYRLDVAKFYVGIGQERMSVLNPDEDIVTMAAAAALPIMQNQD--KNLIDTLF-FA 77 (396)
Q Consensus 1 M~vGI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~~lGi~~r~v~~~~Ed~~tmA~~Aa~~~L~~~~--~~~Id~li-~~ 77 (396)
|+|+|.++|.|+|+++|+|+||++..|++++||.+++||++|++++++|++.+||++|+++||++++ |++||+|| ++
T Consensus 3 ~~v~I~~~G~ylP~~~v~n~e~~~~~~~~~e~i~~rtGI~~Rr~a~~~e~~~dma~~Aa~~aL~~ag~~~~dIdliI~~~ 82 (337)
T PRK06840 3 MNVGIVSTGVYLPKDVMTAEEIAKKTGIPEEVIIEKFGILEKPIPGPEDHTSDMAIAAAKPALKQAGIDPEAIDLVIYIG 82 (337)
T ss_pred CCEEEEEEEEECCCCEECHHHHHHHCCCCHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEE
T ss_conf 51099999997899736699999873998799854658616857899998999999999999997498967887899993
Q ss_pred CCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCC-CCEEEEEECCCCCCCCCCC-----CCC
Q ss_conf 5788754600588886320268773589841420358889987899997399-9769995033201458887-----533
Q gi|254781019|r 78 TESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACALVAKSP-ERKVLIVASDVARYDLGSS-----GEP 151 (396)
Q Consensus 78 T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i~sg~-~~~aLVV~sD~~~~~~~~~-----~~~ 151 (396)
|.++++..|++|++||++||+ +++.+||++++|+||++||++|.+++.+++ .+++|||++|..+..++.. ..+
T Consensus 83 t~~~d~~~ps~A~~vq~~LG~-~~a~afDi~~aC~gf~~aL~~A~~~l~a~~~~~~vLvv~~e~~s~~i~~~~~~~~~~f 161 (337)
T PRK06840 83 EEHKDYPVWTAAPKIQHEIGA-KNAWAFDIMARCGTFPVALKVAKDLMLADPNINNVLLVGGYRNSDLVDYDNPRSRFMF 161 (337)
T ss_pred CCCCCCCCCHHHHHHHHHHCC-CCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCEEEE
T ss_conf 689897884199999998589-9960787133201799999999999871655314786014324655566898851699
Q ss_pred CCCCCEEEEEECCCCCCCEEEE-CCCCCCCCCCCCC--------CCCC-------CCCEEECCHHH-----HHHHHHHHH
Q ss_conf 4783024688426876303531-0001567865112--------7588-------75423566016-----989999999
Q gi|254781019|r 152 TQGCGAVAILISSQTSILEIED-ITGIYTNDCMDFW--------RPNY-------RRTALVDGKYS-----TKIYLQSLE 210 (396)
Q Consensus 152 t~GaGA~Allv~~~~~~~~~~~-~~~~~~~~~~df~--------rp~~-------~~~~~~dg~~~-----~~~y~~~~~ 210 (396)
++||||+|+++++++....+.. ...+... .++.+ .|.. ..+..+.+... ....++.+.
T Consensus 162 ~~GDga~A~ll~~~~~~~~il~~~~~tdg~-~~~~~~~~~gg~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 240 (337)
T PRK06840 162 NLGAGGSAALLKKNYGKNRVLGSAIITDGS-FSEDVRVPAGGTKQPASYETVDNRQHYLDVLDPESMKERLDPVSIPNFY 240 (337)
T ss_pred EECCCCEEEEEECCCCCCCEEEEEECCCCC-CHHCEEEECCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHH
T ss_conf 705883479984168887057666212575-3121687138756888744534542158631038888776889998899
Q ss_pred HHHHHHHHHCCCCHHHCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
Q ss_conf 99999999629882110123311454057888886411024544100134555433344453238543233899999999
Q gi|254781019|r 211 AVWHDYQKNKGHDFNDFQYFCYHQPFTRMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALISLL 290 (396)
Q Consensus 211 ~a~~~~l~~~g~~~~did~~v~H~p~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~slL 290 (396)
+++++.++++|++++|||+|++||++.++.+....++....++ + . +..++|||+++|+|++|..++
T Consensus 241 ~~i~~~L~~~gl~~~DId~~~~hq~~~~~~~~~~~~lgi~~~k----------~---~-~~~~~GNt~sasiplaL~~a~ 306 (337)
T PRK06840 241 KVIREALRKSGYTPKDIDYLAILHMKRSAHIAVLEGLGLTEEQ----------T---I-YLEEYGHMGQIDQILSLHLAL 306 (337)
T ss_pred HHHHHHHHHCCCCHHHCCEEEECCCCHHHHHHHHHHHCCCHHH----------E---E-ECCCCCCHHHHHHHHHHHHHH
T ss_conf 9999999984999578688888533799999999982997543----------4---8-602677317778999999999
Q ss_pred HHCCCCCCCCEEEEEEECCCCCE
Q ss_conf 71574369888999840798303
Q gi|254781019|r 291 DHSSENLAGKRVGFFSYGSGCVA 313 (396)
Q Consensus 291 e~~~~~~~G~rIll~syGsG~~a 313 (396)
+ .+++++||+|+|+|||+|+..
T Consensus 307 ~-~g~l~~Gd~vll~g~G~G~s~ 328 (337)
T PRK06840 307 E-QGKLKDGDLVVLVSAGTGYTW 328 (337)
T ss_pred H-CCCCCCCCEEEEEEEEHHHHH
T ss_conf 8-099999599999999945212
No 18
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=0 Score=376.73 Aligned_cols=293 Identities=19% Similarity=0.197 Sum_probs=233.2
Q ss_pred CCEEEEEEEECCCEEECHHHHHHHCCCCH----HHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCC--HHHCCEEE
Q ss_conf 62066888734890455999998709998----7976303832466559985999999999999997279--57868999
Q gi|254781019|r 2 AIGIEDISFYTTNQYLDLSVIAEKYRLDV----AKFYVGIGQERMSVLNPDEDIVTMAAAAALPIMQNQD--KNLIDTLF 75 (396)
Q Consensus 2 ~vGI~~i~~y~P~~~v~~~~l~~~~g~~~----~k~~~~lGi~~r~v~~~~Ed~~tmA~~Aa~~~L~~~~--~~~Id~li 75 (396)
++.|.++|+|+|+++|+++++.+....+. +|+.+.+||++|++++++|.+.+||+.|+++||++++ +++||+||
T Consensus 7 ~akI~G~g~~vP~~~v~n~d~~~~~~~~d~~~~~~~~~~tGI~~R~~a~~~~~~sdla~~AA~~AL~~a~i~~~dID~II 86 (353)
T PRK12880 7 KAKISGICVSVPEHKICIDDELESVFSNDIKTLKRMKKVIGLNTRYICDENTCVSDLGKHAANTLLQGLNIDKNSLDALI 86 (353)
T ss_pred CCEEEEEEEECCCCEECCHHHHHHHCCCCHHHHEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEE
T ss_conf 40899999977997641479887653874677633424558454778799986999999999999997599988999999
Q ss_pred EECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCC---C
Q ss_conf 9457887546005888863202687735898414203588899878999973999769995033201458887533---4
Q gi|254781019|r 76 FATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACALVAKSPERKVLIVASDVARYDLGSSGEP---T 152 (396)
Q Consensus 76 ~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~~~~~~~~---t 152 (396)
++|+||++..|++|++||++||+..+|.+||+++||+||++||.+|..+|++|.. ++|||++|..+..++..++- .
T Consensus 87 ~aT~tpD~~~PstA~~vq~~LGl~~~~~AfDI~~aCsGfvyaL~~A~~~I~sg~~-kvLlV~~e~~S~~id~~dr~t~~L 165 (353)
T PRK12880 87 VVTQSPDFFMPSTACYLHQLLNLSSKTIAFDLGQACAGYLYGLFVAHSLIQSGLG-KILLICGDTLSKFIHPKNMNLAPI 165 (353)
T ss_pred EECCCCCCCCCCHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCC-CEEEEECHHHCCCCCHHHCCEEEE
T ss_conf 9737889088847899999809998850887454434699999999999981987-489992267536778220551032
Q ss_pred CCCCEEEEEECCCCCCCE-EEE-CCCCC-----------CCCCCCCCCCC---------CCCCEEECCHHHHHHHHHHHH
Q ss_conf 783024688426876303-531-00015-----------67865112758---------875423566016989999999
Q gi|254781019|r 153 QGCGAVAILISSQTSILE-IED-ITGIY-----------TNDCMDFWRPN---------YRRTALVDGKYSTKIYLQSLE 210 (396)
Q Consensus 153 ~GaGA~Allv~~~~~~~~-~~~-~~~~~-----------~~~~~df~rp~---------~~~~~~~dg~~~~~~y~~~~~ 210 (396)
+||||+|+++++.+.... +.. .-|.+ .....+.+.+. ..+..+|||+.+++..++.++
T Consensus 166 FGDgAgA~vl~~~~~~~~~~~l~sdG~~~d~l~i~~gg~~~p~~~~~~~~~~~~~~~~~~~~~l~MdG~~Vf~~av~~vp 245 (353)
T PRK12880 166 FGDGVSATLIEKTDFNEAFFELGSDGKYFDKLIIPKGAMRIPKADIFNDDSLMQTEEFRQLENLYMDGANIFNMALECEP 245 (353)
T ss_pred ECCCCEEEEEECCCCCCCEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHH
T ss_conf 05774368873046786428980488887737846886558775555775322443345555334365899999999999
Q ss_pred HHHHHHHHHCCCCHHHCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
Q ss_conf 99999999629882110123311454057888886411024544100134555433344453238543233899999999
Q gi|254781019|r 211 AVWHDYQKNKGHDFNDFQYFCYHQPFTRMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALISLL 290 (396)
Q Consensus 211 ~a~~~~l~~~g~~~~did~~v~H~p~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~slL 290 (396)
+.++++++++|++.+|||+|++||+|.+|++...+++....++-.. ....++|||++||||++|..+.
T Consensus 246 ~~i~~~L~~agl~~~DId~~v~HQAN~riie~i~k~Lgl~~ek~~~------------~~~~~yGNTssASIPiaL~e~~ 313 (353)
T PRK12880 246 KSFKEILEFSKVDEKDIAFHLFHQSNAYLVDCIKEELKLNDDKVPN------------FIMEKYANLSACSLPALLCELD 313 (353)
T ss_pred HHHHHHHHHCCCCHHHCCEEEECCCCHHHHHHHHHHCCCCHHHHHH------------HHHHHHCCHHHHHHHHHHHHHH
T ss_conf 9999999983999788656865468899999999980989787030------------0555339589999999999998
Q ss_pred HHCCCCCCCCEEEEEEECCCCC
Q ss_conf 7157436988899984079830
Q gi|254781019|r 291 DHSSENLAGKRVGFFSYGSGCV 312 (396)
Q Consensus 291 e~~~~~~~G~rIll~syGsG~~ 312 (396)
+ .++ .|++|++||.|+.
T Consensus 314 ~-~~~----~k~~L~gFGaGlt 330 (353)
T PRK12880 314 T-PKE----FKASLSAFGAGLS 330 (353)
T ss_pred H-CCC----CEEEEEEEEHHHH
T ss_conf 7-499----8446999835741
No 19
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=100.00 E-value=0 Score=366.50 Aligned_cols=300 Identities=37% Similarity=0.480 Sum_probs=237.6
Q ss_pred CCEEEEEEEECCCEEECHHHHHHHCCCCHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHC--CHHHCCEEEEECC
Q ss_conf 62066888734890455999998709998797630383246655998599999999999999727--9578689999457
Q gi|254781019|r 2 AIGIEDISFYTTNQYLDLSVIAEKYRLDVAKFYVGIGQERMSVLNPDEDIVTMAAAAALPIMQNQ--DKNLIDTLFFATE 79 (396)
Q Consensus 2 ~vGI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~~lGi~~r~v~~~~Ed~~tmA~~Aa~~~L~~~--~~~~Id~li~~T~ 79 (396)
+|||.++|.|+|+.+++++++++.++.+ ++.+.+||++|+++.++|++.+||++|+++||+++ +|++||+||++|+
T Consensus 1 ~v~I~~~g~y~P~~~v~~~~~~~~~~~~--~~~~~~Gi~~r~~a~~~e~~~~ma~~Aa~~aL~~a~~~~~~Idlli~~s~ 78 (324)
T cd00827 1 DVGIEAIGAYLPRYRVDNEELAEGLGVD--PGKYTTGIGQRHMAGDDEDVPTMAVEAARRALERAGIDPDDIGLLIVATE 78 (324)
T ss_pred CCCEEEEEEECCCCEECHHHHHHHHCCH--HHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEECC
T ss_conf 9368799997899479599999884952--76502470389967999999999999999999984989889979999325
Q ss_pred CCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCC--CCCCCCCCCCCE
Q ss_conf 887546005888863202687735898414203588899878999973999769995033201458--887533478302
Q gi|254781019|r 80 SSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACALVAKSPERKVLIVASDVARYDL--GSSGEPTQGCGA 157 (396)
Q Consensus 80 t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~~--~~~~~~t~GaGA 157 (396)
|+++..|++|++||++||+. ++.+||++++|+|+++||++|.+|+++|+.+++|||++|+.++.. ++..++++||||
T Consensus 79 ~~~~~~p~~a~~i~~~Lgl~-~~~~~di~~~C~g~~~aL~~A~~~l~~g~~~~~LVv~~e~~s~~~~~~~~~~~~~GDgA 157 (324)
T cd00827 79 SPIDKGKSAATYLAELLGLT-NAEAFDLKQACYGGTAALQLAANLVESGPWRYALVVASDIASYLLDEGSALEPTLGDGA 157 (324)
T ss_pred CCCCCCCCHHHHHHHHHCCC-CCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECHHCCCCCCCCCCCCCCCCCC
T ss_conf 77867974999999985899-97188601422047999999998875487651478740110124677987664457722
Q ss_pred EEEEECCCCCCCEEEECCCCCCCC---------CCCCCCCCCCCCE---E----ECCHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 468842687630353100015678---------6511275887542---3----56601698999999999999999629
Q gi|254781019|r 158 VAILISSQTSILEIEDITGIYTND---------CMDFWRPNYRRTA---L----VDGKYSTKIYLQSLEAVWHDYQKNKG 221 (396)
Q Consensus 158 ~Allv~~~~~~~~~~~~~~~~~~~---------~~df~rp~~~~~~---~----~dg~~~~~~y~~~~~~a~~~~l~~~g 221 (396)
+|+++++++..............+ ..+...+...... . ..+......+.+.+.+++++.+++.+
T Consensus 158 aA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 237 (324)
T cd00827 158 AAMLVSRNPGILAAGIVSTHSTSDPGYDFSPYPVMDGGYPKPCKLAYAIRLTAEPAGRAVFEAAHKLIAKVVRKALDRAG 237 (324)
T ss_pred EEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 89998227865555403677501566544444567888777543210022224441789999999999999999999849
Q ss_pred CCHHHCCEEEECCCCCH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHH-HHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCC
Q ss_conf 88211012331145405-78888864110245441001345554333-44453238543233899999999715743698
Q gi|254781019|r 222 HDFNDFQYFCYHQPFTR-MAEKAHIRLSKIVHQNLSVAEIEKAIGIT-TLYNRLIGNSYTASLYIALISLLDHSSENLAG 299 (396)
Q Consensus 222 ~~~~did~~v~H~p~~k-~~~~~~~~l~~~~~~~~~~~~~e~~~~~~-~~~~~~~GN~~SASi~l~L~slLe~~~~~~~G 299 (396)
++ +|++++++||++.+ +.+....++.....+ +..+ ..+.+++|||+|||+|++|..+++ .+++++|
T Consensus 238 ~~-~~~~~~~~hq~~~~~i~~~~~~~l~~~~~~----------~~~~~~~~~~~~Gn~~sasi~~~L~~~l~-~g~l~~G 305 (324)
T cd00827 238 LS-EDIDYFVPHQPNGKKILEAVAKKLGGPPEK----------ASQTRWILLRRVGNMYAASILLGLASLLE-SGKLKAG 305 (324)
T ss_pred CC-HHHHHEEECCCCHHHHHHHHHHHCCCCHHH----------CCCCHHHHCCCCCCHHHHHHHHHHHHHHH-CCCCCCC
T ss_conf 97-544124325763789999999983996565----------13516465168414489899999999997-2999984
Q ss_pred CEEEEEEECCCCCEEEE
Q ss_conf 88999840798303778
Q gi|254781019|r 300 KRVGFFSYGSGCVAEFF 316 (396)
Q Consensus 300 ~rIll~syGsG~~a~~f 316 (396)
|+|++++||+|+....+
T Consensus 306 d~vll~~~G~G~s~~~~ 322 (324)
T cd00827 306 DRVLLFSYGSGFTAEAF 322 (324)
T ss_pred CEEEEEEECHHHHHHHE
T ss_conf 99999999068315511
No 20
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative; InterPro: IPR004656 This family of archaeal proteins shows considerable homology and identical active site residues to FabH, the beta-ketoacyl-acyl carrier protein synthase III of bacteria and plants. The archaeal species in which it is found, however, do not have a readily detectable homolog of acyl carrier protein itself, suggesting the condensation of the acyl group with some other carrier. In Methanococcus jannaschii, Q58941 from SWISSPROT, Cys-112 is the site of acyl group attachment and His-234 and Asn-237 are also active site residues by homology to FabH. Closely related bacterial families include a polyketide antibiotic (2,4-diacetylphloroglucinol) biosynthesis protein from Pseudomonas fluorescens and an uncharacterised protein from Staphylococcus carnosus. .
Probab=100.00 E-value=0 Score=371.28 Aligned_cols=339 Identities=24% Similarity=0.331 Sum_probs=310.4
Q ss_pred CCEEEEEEEECCCEEECHHHHHHHCCCCHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHC--CHHHCCEEEEECC
Q ss_conf 62066888734890455999998709998797630383246655998599999999999999727--9578689999457
Q gi|254781019|r 2 AIGIEDISFYTTNQYLDLSVIAEKYRLDVAKFYVGIGQERMSVLNPDEDIVTMAAAAALPIMQNQ--DKNLIDTLFFATE 79 (396)
Q Consensus 2 ~vGI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~~lGi~~r~v~~~~Ed~~tmA~~Aa~~~L~~~--~~~~Id~li~~T~ 79 (396)
.+||.+.|.|+|.+++.++||++.|+.+|..|.+++-+.+++|+..|||++|++++|+|++|.++ ||++|..+.++++
T Consensus 1 ~~GivGyG~y~P~yri~~eei~rvW~~dp~~i~~g~~~~ek~vP~~ded~~ti~~eaarnal~r~~idP~~i~a~~~Gse 80 (347)
T TIGR00748 1 MAGIVGYGAYIPKYRIKVEEIARVWGDDPEAISKGLLVEEKAVPGLDEDTATIAVEAARNALKRAKIDPKDIGAVYVGSE 80 (347)
T ss_pred CCCEEEECCCCCCEEECHHHHHHHHCCCHHHHHCCEEEEECCCCCCCCCCEEEHHHHHHHHHHHCCCCHHHCCEEEECCC
T ss_conf 94157621011531110234443305663686557025532478866340011146778777630478416417796056
Q ss_pred CCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEE
Q ss_conf 88754600588886320268773589841420358889987899997399976999503320145888753347830246
Q gi|254781019|r 80 SSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACALVAKSPERKVLIVASDVARYDLGSSGEPTQGCGAVA 159 (396)
Q Consensus 80 t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~~~~~~~~t~GaGA~A 159 (396)
|.|+..||++++|.+.++..++..+.|+.++|.+|+.+|+.+..++++|..+++|.|++|++...+++..|+|.++|.+|
T Consensus 81 s~PyavkP~~t~~aea~~atP~l~aad~efaCkaGt~~~q~~~G~v~sG~~ky~la~GadtaqG~PGd~le~ta~aGGaa 160 (347)
T TIGR00748 81 SKPYAVKPTATIVAEAIEATPDLTAADLEFACKAGTAGIQACIGLVESGLIKYGLAIGADTAQGAPGDALEYTAAAGGAA 160 (347)
T ss_pred CCCCEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCEE
T ss_conf 86510064035554454057574022135555521688998875676446665543124102689863100000378526
Q ss_pred EEECCCC-CCCEEEECCCCCCCCCCCCCCCCCCCCEEECCHHHHH-HHHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCC
Q ss_conf 8842687-6303531000156786511275887542356601698-9999999999999996298821101233114540
Q gi|254781019|r 160 ILISSQT-SILEIEDITGIYTNDCMDFWRPNYRRTALVDGKYSTK-IYLQSLEAVWHDYQKNKGHDFNDFQYFCYHQPFT 237 (396)
Q Consensus 160 llv~~~~-~~~~~~~~~~~~~~~~~df~rp~~~~~~~~dg~~~~~-~y~~~~~~a~~~~l~~~g~~~~did~~v~H~p~~ 237 (396)
.+++... ..+.....+.+++.|.+||||..+.+||++.++|.-+ .|.+++-.+.+.++++.|+..+||||.+||||+.
T Consensus 161 ~~iG~~~~~~~a~~~~~ysy~tdtPdf~rr~~~~yPrhG~rftGePayf~hv~~aa~~lm~~~G~~~~d~dy~vfhqPn~ 240 (347)
T TIGR00748 161 YIIGEKNSEVVAEFEGTYSYTTDTPDFWRREGKPYPRHGGRFTGEPAYFKHVVTAAKGLMEKLGLKPEDFDYAVFHQPNG 240 (347)
T ss_pred EEECCCCHHHHHHHHCCEEEEECCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCC
T ss_conf 88607512234311033224206815664067878877875467637899999999999997278823141478755875
Q ss_pred HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEEE
Q ss_conf 57888886411024544100134555433344453238543233899999999715743698889998407983037787
Q gi|254781019|r 238 RMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALISLLDHSSENLAGKRVGFFSYGSGCVAEFFS 317 (396)
Q Consensus 238 k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~slLe~~~~~~~G~rIll~syGsG~~a~~f~ 317 (396)
|+..++.+.|....+ ++.+. ++...+|||||+..+++|...|+.. ++|+|||..|||||+.+..|.
T Consensus 241 kf~~~~a~~lG~~~e----------~~~~G-ll~~~iGntysGa~~~G~~~~ld~~---~~G~ril~vs~GsGaGsdaf~ 306 (347)
T TIGR00748 241 KFYLKAARILGFKKE----------QVKPG-LLTPVIGNTYSGATPVGLSAVLDVA---EPGERILAVSYGSGAGSDAFS 306 (347)
T ss_pred CEEEEEHHHHCCCHH----------CEECC-CCCCCCCCCCCCHHHHHHHHHHHCC---CCCCEEEEEEECCCCCCCEEE
T ss_conf 044411234075101----------00001-0123335432331455467775304---788648999606776753367
Q ss_pred EEEECCHHHHHHCC-CHHHHHHCCCCCCHHHHHHHHHH
Q ss_conf 78602268765203-87889742722389999999863
Q gi|254781019|r 318 GIVQKNYRKKSHQK-RHQHIINSRIPISYQVYCDLHQD 354 (396)
Q Consensus 318 ~~v~~~~~~~~~~~-~~~~~L~~r~~l~~~~y~~~~~~ 354 (396)
..|++.+++..... .+...|++|+.++|.-|.++.+.
T Consensus 307 i~v~d~i~~~~~~aP~~~~~~~~~~~~dya~yak~~~k 344 (347)
T TIGR00748 307 IVVQDAIEEKRDLAPKVAEYIKRKKYIDYALYAKFRKK 344 (347)
T ss_pred EEEHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHH
T ss_conf 77311266554116027999862002456777886420
No 21
>pfam08540 HMG_CoA_synt_C Hydroxymethylglutaryl-coenzyme A synthase C terminal.
Probab=100.00 E-value=0 Score=355.78 Aligned_cols=218 Identities=30% Similarity=0.483 Sum_probs=190.1
Q ss_pred EEECCCCCCCCCCCCCCCC-CCCCEEECCHHHHHHHHHHHHHHHHHHHHHC---------CCCHHHCCEEEECCCCCHHH
Q ss_conf 5310001567865112758-8754235660169899999999999999962---------98821101233114540578
Q gi|254781019|r 171 IEDITGIYTNDCMDFWRPN-YRRTALVDGKYSTKIYLQSLEAVWHDYQKNK---------GHDFNDFQYFCYHQPFTRMA 240 (396)
Q Consensus 171 ~~~~~~~~~~~~~df~rp~-~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~---------g~~~~did~~v~H~p~~k~~ 240 (396)
..+.+++|+.|++|||||+ .++||+|||++|++||++++.+|++.+.+|. +..++|||++|||.||+||+
T Consensus 4 e~glrgs~m~h~YDFyKPd~~SEyP~VDGk~Si~cYl~ALd~cy~~Y~~K~~~~~~~~~~~~~ld~fd~~~FH~Py~Klv 83 (282)
T pfam08540 4 DRGLRGSHMEHAYDFYKPDLTSEYPVVDGKLSLQCYLKALDSCYKNYCKKIEKQTKDGGTKFGLDDFDYVIFHSPYCKLV 83 (282)
T ss_pred CCCCCEEEEECCEECCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCEEEEECCHHHHH
T ss_conf 68867323001501468898997864472889999999999999999999873002367766376677899857544899
Q ss_pred HHHHHHHCCHH-------------------------------------HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
Q ss_conf 88886411024-------------------------------------54410013455543334445323854323389
Q gi|254781019|r 241 EKAHIRLSKIV-------------------------------------HQNLSVAEIEKAIGITTLYNRLIGNSYTASLY 283 (396)
Q Consensus 241 ~~~~~~l~~~~-------------------------------------~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~ 283 (396)
+|++.|+.... ........+++++.|++.+++++|||||||+|
T Consensus 84 qKs~arl~~nD~~~~~~~~~~~~~~~~l~~~~~~~~e~s~~dk~~ek~~~~~sk~~f~~kv~psl~~~~~vGNmYTaSlY 163 (282)
T pfam08540 84 QKSLARLLYNDFLRNPSSDKGNGVYEKLEALGGLKLEDSYTDRDLEKAFMQLSKPLFKKKTKPSLLLPTQVGNMYTASLY 163 (282)
T ss_pred HHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHH
T ss_conf 99999999876530655201100011110001464454010068999999870898986326187887860750069999
Q ss_pred HHHHHHHHHCC-CCCCCCEEEEEEECCCCCEEEEEEEEECCHH-------HHHHCCCHHHHHHCCCCCCHHHHHHHHH--
Q ss_conf 99999997157-4369888999840798303778778602268-------7652038788974272238999999986--
Q gi|254781019|r 284 IALISLLDHSS-ENLAGKRVGFFSYGSGCVAEFFSGIVQKNYR-------KKSHQKRHQHIINSRIPISYQVYCDLHQ-- 353 (396)
Q Consensus 284 l~L~slLe~~~-~~~~G~rIll~syGsG~~a~~f~~~v~~~~~-------~~~~~~~~~~~L~~r~~l~~~~y~~~~~-- 353 (396)
++|+|+|.+.+ ..+.|+||+||||||||+|+|||++|+++.. .+....++..+|++|+.+++++|+++++
T Consensus 164 ~~L~SLL~~~~~~~L~GkRIg~FSYGSGlaas~FS~~v~~d~~~~~~l~~~i~~~~~l~~rL~~R~~~~Pe~f~~~~~lr 243 (282)
T pfam08540 164 AALASLLSHVSADELAGKRIGMFSYGSGLAASLFSLRVSQDVSPGSILQKLITKVLDLKNKLDSRHCVSPEEFEETMELR 243 (282)
T ss_pred HHHHHHHHCCCCCCCCCCEEEEEECCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
T ss_conf 99999984377523489989998516661124675898588676641788999876179998568547978999999999
Q ss_pred ---HCCCCCCCCCCCCCCCCCCEEEEEEEC-CEEEEEEE
Q ss_conf ---306888876316667888669835655-38998861
Q gi|254781019|r 354 ---DIIPSVEGNCTIPHTTTGPFRLATIQN-HKRIYETT 388 (396)
Q Consensus 354 ---~~~~~~~~~~~~~~~~~~~~~l~~i~~-~~R~Y~~~ 388 (396)
+...++.|.++++.+.||+|||++||+ |||+|+++
T Consensus 244 e~~~~~~~~~p~~s~~~l~pGtyYL~~VD~~~RR~Y~~k 282 (282)
T pfam08540 244 EQAHHKKNFTPQGSIDSLFPGTYYLTNVDSLYRRSYARK 282 (282)
T ss_pred HHHCCCCCCCCCCCCCCCCCCCEECCCCHHHHHCCCCCC
T ss_conf 997078998778970227998864011024332021469
No 22
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=100.00 E-value=0 Score=332.91 Aligned_cols=301 Identities=20% Similarity=0.234 Sum_probs=231.2
Q ss_pred CEEEEEEEECCCEEECHHHHHHHCCCC------------HHHHHHHCCCCEEEECCCC----------------------
Q ss_conf 206688873489045599999870999------------8797630383246655998----------------------
Q gi|254781019|r 3 IGIEDISFYTTNQYLDLSVIAEKYRLD------------VAKFYVGIGQERMSVLNPD---------------------- 48 (396)
Q Consensus 3 vGI~~i~~y~P~~~v~~~~l~~~~g~~------------~~k~~~~lGi~~r~v~~~~---------------------- 48 (396)
.-|.++|.|+|+++++|+++.+..... ..|+.+.+||++|+++.++
T Consensus 2 A~I~gigt~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~tgI~~R~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 81 (361)
T cd00831 2 ATILAIGTAVPPHRVPQSELVDFYRRLFSSDHLPELKEKLKRLCAKTGIETRYLVLPGGEETYAPRPEMSPSLDERNDIA 81 (361)
T ss_pred EEEEEEEEECCCEEECHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCHHHCCCCCCCCCCHHHHHHHH
T ss_conf 19999887779926759999999987443334356789999999726986155552661220245655588878887779
Q ss_pred -CCHHHHHHHHHHHHHHHCC--HHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECC-CHHHHHHHHHHHHHH
Q ss_conf -5999999999999997279--578689999457887546005888863202687735898414-203588899878999
Q gi|254781019|r 49 -EDIVTMAAAAALPIMQNQD--KNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQ-ACYSATCALHMACAL 124 (396)
Q Consensus 49 -Ed~~tmA~~Aa~~~L~~~~--~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~-aC~g~~~AL~~A~~~ 124 (396)
|.+.+||++|+++||++++ |+|||+||++|+| .+..|+++++|+++||+++++..+|+.+ ||+||++||.+|.++
T Consensus 82 ~~~~~~la~~Aa~~AL~~ag~~~~dId~lI~~Tst-~~~~Ps~a~~v~~~LGl~~~~~~~dl~~~gCsg~~~aL~~A~~~ 160 (361)
T cd00831 82 LEEARELAEEAARGALDEAGLRPSDIDHLVVNTST-GNPTPSLDAMLINRLGLRPDVKRYNLGGMGCSAGAIALDLAKDL 160 (361)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCC-CCCCCCHHHHHHHHHCCCCCHHEEECCCCCCHHHHHHHHHHHHH
T ss_conf 98999999999999999819898999999998659-99989769999997389987003556467556899999999999
Q ss_pred HHCCCCCEEEEEECCCCCCCCCCCCC-------CCCCCCEEEEEECCCCCCCEEE-------ECCCCCCCCCCC--CCCC
Q ss_conf 97399976999503320145888753-------3478302468842687630353-------100015678651--1275
Q gi|254781019|r 125 VAKSPERKVLIVASDVARYDLGSSGE-------PTQGCGAVAILISSQTSILEIE-------DITGIYTNDCMD--FWRP 188 (396)
Q Consensus 125 i~sg~~~~aLVV~sD~~~~~~~~~~~-------~t~GaGA~Allv~~~~~~~~~~-------~~~~~~~~~~~d--f~rp 188 (396)
+++|+.+++|||++|..+...+..+. ..+||||+|++++.++...... ........+..+ .|..
T Consensus 161 i~~g~~~~vLVV~~E~~S~~~~~~d~~~~~v~~~LFGDGA~A~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (361)
T cd00831 161 LEANPGARVLVVSTELCSLWYRGPDHRSMLVGNALFGDGAAAVLLSNDPRDRRRERPLFELVRAASTLLPDSEDAMGWHL 240 (361)
T ss_pred HHHCCCCEEEEEEEEECCEECCCCCCHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCC
T ss_conf 98299976999961211202068875777554200047725899842676665666526883777612468887666650
Q ss_pred CCCCCEEECCHHHHHHHHHHHHHHHHHHHHHC--CCCHHHCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
Q ss_conf 88754235660169899999999999999962--9882110123311454057888886411024544100134555433
Q gi|254781019|r 189 NYRRTALVDGKYSTKIYLQSLEAVWHDYQKNK--GHDFNDFQYFCYHQPFTRMAEKAHIRLSKIVHQNLSVAEIEKAIGI 266 (396)
Q Consensus 189 ~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~--g~~~~did~~v~H~p~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~ 266 (396)
....+....++.......+.++..++.++++. ++...|+++|++||++.++++....++....+ ++.+
T Consensus 241 ~~~g~~~~l~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~di~~~~~Hq~~~~Ii~~v~~~Lgl~~~----------~~~~ 310 (361)
T cd00831 241 GEEGLTFVLSRDVPRLVEKNLERVLRKLLARLGIGLFKLAFDHWCVHPGGRAVLDAVEKALGLSPE----------DLEA 310 (361)
T ss_pred CCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCEEEECCCCHHHHHHHHHHCCCCHH----------HHHH
T ss_conf 577537850636999999999999999999825899967725588787868999999998298968----------8325
Q ss_pred HHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEE
Q ss_conf 3444532385432338999999997157436988899984079830377
Q gi|254781019|r 267 TTLYNRLIGNSYTASLYIALISLLDHSSENLAGKRVGFFSYGSGCVAEF 315 (396)
Q Consensus 267 ~~~~~~~~GN~~SASi~l~L~slLe~~~~~~~G~rIll~syGsG~~a~~ 315 (396)
+....+++|||+|||||++|..+++ .+++++||+|++++||+|+..+.
T Consensus 311 s~~~l~~~GNtsSaSip~~L~~~~~-~~~~~~Gd~vl~~afG~Glt~~~ 358 (361)
T cd00831 311 SRMVLRRYGNMSSSSVLYVLAYMEA-KGRVKRGDRGLLIAFGPGFTCES 358 (361)
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHH-CCCCCCCCEEEEEEECCHHEEEE
T ss_conf 7878986385398899999999997-39999999899999810405531
No 23
>pfam01154 HMG_CoA_synt_N Hydroxymethylglutaryl-coenzyme A synthase N terminal.
Probab=100.00 E-value=0 Score=315.52 Aligned_cols=165 Identities=31% Similarity=0.501 Sum_probs=157.1
Q ss_pred CCEEEEEEEECCCEEECHHHHHHHCCCCHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHC--CHHHCCEEEEECC
Q ss_conf 62066888734890455999998709998797630383246655998599999999999999727--9578689999457
Q gi|254781019|r 2 AIGIEDISFYTTNQYLDLSVIAEKYRLDVAKFYVGIGQERMSVLNPDEDIVTMAAAAALPIMQNQ--DKNLIDTLFFATE 79 (396)
Q Consensus 2 ~vGI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~~lGi~~r~v~~~~Ed~~tmA~~Aa~~~L~~~--~~~~Id~li~~T~ 79 (396)
+|||++|++|+|++++++.+|++.+|.+++|+++|+||++|+|++++||++|||++|++++|++. +|++|++|+++||
T Consensus 1 ~VGI~~i~~Y~P~~~v~~~~La~~rg~d~~K~~~GlG~~~mav~~~~ED~vTmAanAa~~ll~~~~i~~~~Ig~l~vgTE 80 (171)
T pfam01154 1 DVGIVALEIYFPSQYVDQAELEKYDGVSAGKYTIGLGQTKMGFCTDREDINSLCLTVVQKLMERNNLDYDCIGRLEVGTE 80 (171)
T ss_pred CCCEEEEEEECCHHEECHHHHHHHHCCCHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEECCC
T ss_conf 98987898847711135999999959898885204586354279997279999999999999873999888407996377
Q ss_pred CCCCCCHHHHHHHHHHHCCCCCC--EEEEECCCHHHHHHHHHHHHHHHHCCC--CCEEEEEECCCCCCCCCCCCCCCCCC
Q ss_conf 88754600588886320268773--589841420358889987899997399--97699950332014588875334783
Q gi|254781019|r 80 SSVDQSKSAAIWLHKLLGLNSSC--RVVELKQACYSATCALHMACALVAKSP--ERKVLIVASDVARYDLGSSGEPTQGC 155 (396)
Q Consensus 80 t~~~~~~~~a~~v~~~Lgl~~~~--~~~Di~~aC~g~~~AL~~A~~~i~sg~--~~~aLVV~sD~~~~~~~~~~~~t~Ga 155 (396)
|++|.+||++++||++|+++.++ +++|+++||+|+|+||++|.+||++++ ++++|||++|+++|..+++ |+|+||
T Consensus 81 S~iD~SKs~~t~l~~ll~~~~~~~~~~~e~k~ACyggTaAL~~a~~~v~s~~~~~k~alVV~sDiA~y~~~~~-e~TqGA 159 (171)
T pfam01154 81 TIIDKSKSVKTVLMQLFEESGNTDIEGIDTTNACYGGTAALFNALNWIESSSWDGRYALVVAGDIAIYAKGNA-RPTGGA 159 (171)
T ss_pred CCCCCCCCHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCC-CCCCCC
T ss_conf 6456655689999998376578874033300106989999999999998288789639999841001379998-756770
Q ss_pred CEEEEEECCCCC
Q ss_conf 024688426876
Q gi|254781019|r 156 GAVAILISSQTS 167 (396)
Q Consensus 156 GA~Allv~~~~~ 167 (396)
||+|||++++.+
T Consensus 160 GAVAmLv~~nap 171 (171)
T pfam01154 160 GAVAMLIGPNAP 171 (171)
T ss_pred CEEEEEECCCCC
T ss_conf 358999758999
No 24
>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2.8e-33 Score=225.84 Aligned_cols=303 Identities=17% Similarity=0.194 Sum_probs=226.0
Q ss_pred EEEEEEEECCCEEECHHHHHHHC----CC-CHH---H-HHHHCCCCEEEECCCC-----------------CCHHHHHHH
Q ss_conf 06688873489045599999870----99-987---9-7630383246655998-----------------599999999
Q gi|254781019|r 4 GIEDISFYTTNQYLDLSVIAEKY----RL-DVA---K-FYVGIGQERMSVLNPD-----------------EDIVTMAAA 57 (396)
Q Consensus 4 GI~~i~~y~P~~~v~~~~l~~~~----g~-~~~---k-~~~~lGi~~r~v~~~~-----------------Ed~~tmA~~ 57 (396)
-|.+++.++|.+.++++|+.... .. .-+ + +.+.-+|++|.+..|. |.++.+++.
T Consensus 3 ~i~sv~t~~Ppy~~~Qse~~d~f~~~~~~~~~~~I~r~l~~~~~i~~R~~v~Pl~~y~e~~~f~ekN~ifie~a~~l~v~ 82 (356)
T COG3424 3 VIASVATALPPYRYNQSEITDSFAELPFQEGREDIPRVLHANAQINRRHLVLPLDWYREPHGFGEKNEIFIEEAVPLGVD 82 (356)
T ss_pred EEEECCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEECCCHHHCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 54000057996435667889999873152226788999865336251212262766417887566303499987999999
Q ss_pred HHHHHHHHCC--HHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECC-CHHHHHHHHHHHHHHHHCCCCCEEE
Q ss_conf 9999997279--578689999457887546005888863202687735898414-2035888998789999739997699
Q gi|254781019|r 58 AALPIMQNQD--KNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQ-ACYSATCALHMACALVAKSPERKVL 134 (396)
Q Consensus 58 Aa~~~L~~~~--~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~-aC~g~~~AL~~A~~~i~sg~~~~aL 134 (396)
|.++||+..+ |+|||+|+++|+|+. ..|+....++++||+++++..+-+.+ +|+|+.+||..|.+++++.|..++|
T Consensus 83 a~r~aL~~~~l~pedId~vv~vtsTG~-~~Ps~dari~~~Lgl~p~~~Rvpv~glGCaaga~glara~~y~ra~P~~~vl 161 (356)
T COG3424 83 ALRRALDGSPLRPEDIDAVVTVTSTGL-ATPSLDARIVGELGLSPDTRRVPVWGLGCAAGAAGLARARDYCRAAPDANVL 161 (356)
T ss_pred HHHHHHCCCCCCHHHCCEEEEEEECCC-CCCCHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCEEE
T ss_conf 999885269999778867999950255-4787549988613999764052200320142115789999997508665089
Q ss_pred EEECCCCCCCCCCCC--------CCCCCCCEEEEEECCCCCCCEEE-------ECCCCCCCCCCCC--CCCCCCCCEEEC
Q ss_conf 950332014588875--------33478302468842687630353-------1000156786511--275887542356
Q gi|254781019|r 135 IVASDVARYDLGSSG--------EPTQGCGAVAILISSQTSILEIE-------DITGIYTNDCMDF--WRPNYRRTALVD 197 (396)
Q Consensus 135 VV~sD~~~~~~~~~~--------~~t~GaGA~Allv~~~~~~~~~~-------~~~~~~~~~~~df--~rp~~~~~~~~d 197 (396)
|||.|.++-..-..+ -..+|||++|++++.+.+..... ..+.+-..+.-|. |-=....+..+-
T Consensus 162 vV~vELCSLt~~~~d~t~s~lVgtaLF~DG~AA~vv~gd~~~~~~~~~~p~i~~s~StL~~dse~~Mgwdv~d~G~~~vl 241 (356)
T COG3424 162 VVCVELCSLTYVFADDTKSNLVGTALFGDGAAAVVVSGDRRAEGKRPLRPDILDSFSTLYPDSEDIMGWDVGDQGLKVVL 241 (356)
T ss_pred EEEEEEEEEEEECCCCCCCCCEEEEEECCCEEEEEEECCCCCCCCCCCCCEECCCCCCCCCCCCCCCCEEECCCCEEEEE
T ss_conf 99946321554347887545133330048705899834643346678975000454546886210011530488479997
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 60169899999999999999962988211012331145405788888641102454410013455543334445323854
Q gi|254781019|r 198 GKYSTKIYLQSLEAVWHDYQKNKGHDFNDFQYFCYHQPFTRMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNS 277 (396)
Q Consensus 198 g~~~~~~y~~~~~~a~~~~l~~~g~~~~did~~v~H~p~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~ 277 (396)
.+......-..+.+.+..++..++++.+||++|+.|..++|++.+....|....+ ...-+....+++|||
T Consensus 242 Srdlp~lIe~~l~~~V~~fL~~~~ls~~dI~~w~~HPGG~KVida~~~sLgls~e----------~l~~s~~~L~~~GNM 311 (356)
T COG3424 242 SRDLPNLIESYLAPNVTTFLATHGLSIEDIEAWVVHPGGPKVIDAYEESLGLSPE----------ALELSWDVLREYGNM 311 (356)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCEEEECCCCCHHHHHHHHHCCCCHH----------HHHHHHHHHHHHCCC
T ss_conf 5732689999852558999997687665411155579970699999876189988----------999999999982786
Q ss_pred CCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEEEEE
Q ss_conf 323389999999971574369888999840798303778778
Q gi|254781019|r 278 YTASLYIALISLLDHSSENLAGKRVGFFSYGSGCVAEFFSGI 319 (396)
Q Consensus 278 ~SASi~l~L~slLe~~~~~~~G~rIll~syGsG~~a~~f~~~ 319 (396)
+|||+...|...|++. -++|+|.+++.||.|+++|..-++
T Consensus 312 SSatvLfVL~d~l~~~--~~~g~~Gl~~A~GPGf~sElvL~~ 351 (356)
T COG3424 312 SSATVLFVLEDTLQKA--PKSGSRGLMFAMGPGFCSELVLLD 351 (356)
T ss_pred CCHHHHHHHHHHHHHC--CCCCCCEEEEECCCCCEEEEEEEE
T ss_conf 5210299999999736--887763034532786322244577
No 25
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=99.97 E-value=6.1e-30 Score=205.11 Aligned_cols=233 Identities=19% Similarity=0.154 Sum_probs=175.5
Q ss_pred CCCCCHHHHHHHHHHHHHHHCC--HHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHH
Q ss_conf 9985999999999999997279--57868999945788754600588886320268773589841420358889987899
Q gi|254781019|r 46 NPDEDIVTMAAAAALPIMQNQD--KNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACA 123 (396)
Q Consensus 46 ~~~Ed~~tmA~~Aa~~~L~~~~--~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~ 123 (396)
.+.+.+.+||++|+++||++++ +++||+||++|.|+++..|+.+..|+..||+. +.++|++..+|+++++||..|..
T Consensus 2 ~~g~~~s~la~~Aa~~Al~dAGi~~~~i~~viv~t~t~~~~~p~~a~~v~~~lgl~-~~p~~~v~~aCss~~~Al~~A~~ 80 (254)
T cd00327 2 GLGITASELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGIS-GGPAYSVNQACATGLTALALAVQ 80 (254)
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCCHHHCCEEEEEEECCCCHHHHHHHHHHHHCCCC-CCCCEEHHHHHHHHHHHHHHHHH
T ss_conf 98844999999999999998299854688999999787502247999999982999-98806612024377799999999
Q ss_pred HHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEE-----ECCCCCCCCCCCCCCCCCCCCEEECC
Q ss_conf 9973999769995033201458887533478302468842687630353-----10001567865112758875423566
Q gi|254781019|r 124 LVAKSPERKVLIVASDVARYDLGSSGEPTQGCGAVAILISSQTSILEIE-----DITGIYTNDCMDFWRPNYRRTALVDG 198 (396)
Q Consensus 124 ~i~sg~~~~aLVV~sD~~~~~~~~~~~~t~GaGA~Allv~~~~~~~~~~-----~~~~~~~~~~~df~rp~~~~~~~~dg 198 (396)
+|++|+.+.+||+++|. +.+|+||+++++++.+...... ...+... .. +|
T Consensus 81 ~i~~G~~~~vlv~g~e~----------~~~gdGAga~vl~~~~~a~~~~~~~~~~i~~~~~--~~-------------~g 135 (254)
T cd00327 81 QVQNGKADIVLAGGSEE----------FVFGDGAAAAVVESEEHALRRGAHPQAEIVSTAA--TF-------------DG 135 (254)
T ss_pred HHHHCCCCEEEECCCEE----------EEECCCCEEEEECCHHHHHCCCCCEEEEEECCCC--CC-------------CC
T ss_conf 99958999899738768----------8706760888730245665389851477851312--34-------------69
Q ss_pred H-HHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 0-169899999999999999962988211012331145405788888641102454410013455543334445323854
Q gi|254781019|r 199 K-YSTKIYLQSLEAVWHDYQKNKGHDFNDFQYFCYHQPFTRMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNS 277 (396)
Q Consensus 199 ~-~~~~~y~~~~~~a~~~~l~~~g~~~~did~~v~H~p~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~ 277 (396)
. .......+.+.+++++.++++|++++|||||.+||.+.++.+....++.....+. +..+....-.++|||
T Consensus 136 ~~~~~~p~~~~~~~~i~~al~~agl~~~dId~v~~H~tgt~i~D~iE~~a~~~~~~~--------~~~~i~s~k~~~GH~ 207 (254)
T cd00327 136 ASMVPAVSGEGLARAARKALEGAGLTPSDIDYVEAHGTGTPIGDAVELALGLDPDGV--------RSPAVSATLIMTGHP 207 (254)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCCCCCHHHHHHHCCCCCCC--------CCCCCCCCCCCCCCC
T ss_conf 986627887899999999999839986452579978887835459999865340069--------988706740141542
Q ss_pred CCCHHHHHHHHHHHH--CC----CCCCCCEEEEEEECCCCC
Q ss_conf 323389999999971--57----436988899984079830
Q gi|254781019|r 278 YTASLYIALISLLDH--SS----ENLAGKRVGFFSYGSGCV 312 (396)
Q Consensus 278 ~SASi~l~L~slLe~--~~----~~~~G~rIll~syGsG~~ 312 (396)
.+||.++.|...+.. .+ ..+.++++++.|||.|..
T Consensus 208 ~~Asg~~~l~~~~l~l~~~~ippt~~~~~~~~~~~fG~Ggt 248 (254)
T cd00327 208 LGAAGLAILDELLLMLEHEFIPPTPREPRTVLLLGFGLGGT 248 (254)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCE
T ss_conf 99999999999999985598697899999999957564711
No 26
>pfam00195 Chal_sti_synt_N Chalcone and stilbene synthases, N-terminal domain. The C-terminal domain of Chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in this N-terminal domain.
Probab=99.93 E-value=4e-24 Score=168.98 Aligned_cols=162 Identities=26% Similarity=0.356 Sum_probs=134.8
Q ss_pred EEEEEEEECCCEEECHHHHHHH----CCCC--------HHHHHHHCCCCEEEECCCCC----------------------
Q ss_conf 0668887348904559999987----0999--------87976303832466559985----------------------
Q gi|254781019|r 4 GIEDISFYTTNQYLDLSVIAEK----YRLD--------VAKFYVGIGQERMSVLNPDE---------------------- 49 (396)
Q Consensus 4 GI~~i~~y~P~~~v~~~~l~~~----~g~~--------~~k~~~~lGi~~r~v~~~~E---------------------- 49 (396)
-|.+||..+|+++++++++.+. .+.+ ..++.+..||++|+.+-++|
T Consensus 18 ~Il~IgTA~Pp~~~~Q~~~~d~~~~~~~~~~~~~~k~~l~ri~~~sgI~~R~~vl~~e~~~~~P~~~~~~~ps~~~R~~~ 97 (228)
T pfam00195 18 TILAIGTATPSNCVDQSTYPDYYFRVTKSEHLTDLKEKFQRICEKSTIKKRYMVLTEEILKENPELCTEMAPSLDARQDI 97 (228)
T ss_pred EEEEEEEECCCCEECHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEECHHHHHHCCCCCCCCCCCHHHHHHH
T ss_conf 99999971899552489999999997344324267899998998469883158617687614955102569998999999
Q ss_pred ---CHHHHHHHHHHHHHHHCC--HHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEEC-CCHHHHHHHHHHHHH
Q ss_conf ---999999999999997279--57868999945788754600588886320268773589841-420358889987899
Q gi|254781019|r 50 ---DIVTMAAAAALPIMQNQD--KNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELK-QACYSATCALHMACA 123 (396)
Q Consensus 50 ---d~~tmA~~Aa~~~L~~~~--~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~-~aC~g~~~AL~~A~~ 123 (396)
.+..|+.+|+++||++++ ++||++||++|+|+. ..|+....|+++|||++++..+.+. .+|+|++++|..|.+
T Consensus 98 ~~~~a~~La~~Aa~~AL~~aG~~~~dIthlv~vt~TG~-~~Pg~d~~l~~~LGL~~~v~R~~i~~~GC~gg~~gL~~A~~ 176 (228)
T pfam00195 98 AVVEVPKLGKEAALKAIKEWGQPKSKITHLVFCTTSGV-DMPGADYQLTKLLGLRPSVKRVMLYQQGCFAGGTVLRLAKD 176 (228)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHCCEEEEECCCCC-CCCCHHHHHHHHCCCCCCCHHEEEECCCCHHHHHHHHHHHH
T ss_conf 99999999999999999995889889999999947999-88747899999829898721114114541648999999999
Q ss_pred HHHCCCCCEEEEEECCCCCCCCCCCCC---------CCCCCCEEEEEECCCC
Q ss_conf 997399976999503320145888753---------3478302468842687
Q gi|254781019|r 124 LVAKSPERKVLIVASDVARYDLGSSGE---------PTQGCGAVAILISSQT 166 (396)
Q Consensus 124 ~i~sg~~~~aLVV~sD~~~~~~~~~~~---------~t~GaGA~Allv~~~~ 166 (396)
++++++..++||||+|.++.....+.+ ..|||||+|++++.+|
T Consensus 177 ~~~~~p~~~VLvv~~Elcsl~f~~~~~~~~~~lV~~aLFgDGAaAvvv~adP 228 (228)
T pfam00195 177 LAENNKGARVLVVCSEITAVTFRGPSETHLDSLVGQALFGDGAAAVIIGSDP 228 (228)
T ss_pred HHHHCCCCEEEEEEEEHHHEEECCCCCCCHHHHHHHHHCCCCCEEEEEECCC
T ss_conf 9982999879999824011030488765677773441202751799971699
No 27
>pfam08541 ACP_syn_III_C 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal. This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EC:2.3.1.41, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria.
Probab=99.58 E-value=5.4e-15 Score=112.20 Aligned_cols=85 Identities=21% Similarity=0.249 Sum_probs=69.4
Q ss_pred HHHCCCCHHHCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCC
Q ss_conf 99629882110123311454057888886411024544100134555433344453238543233899999999715743
Q gi|254781019|r 217 QKNKGHDFNDFQYFCYHQPFTRMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALISLLDHSSEN 296 (396)
Q Consensus 217 l~~~g~~~~did~~v~H~p~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~slLe~~~~~ 296 (396)
|+++|++++|||+|++||++.++.+...+++....++. ....+++|||+|||+|++|..+++ .+++
T Consensus 1 L~~~g~~~~dId~~i~Hq~~~~~~~~i~~~lgi~~~k~-------------~~~~~~~GN~~sasip~~L~~~~~-~~~i 66 (90)
T pfam08541 1 LEKAGLTPDDIDWFVPHQANLRIIDAVAKRLGLPPEKV-------------VVNLDRYGNTSAASIPLALDEAVE-EGKL 66 (90)
T ss_pred CCCCCCCHHHCCEEEECCCCHHHHHHHHHHHCCCHHHC-------------EEHHHCCCCCCCCHHHHHHHHHHH-CCCC
T ss_conf 94404997999999978888899999999819791325-------------032440377620239999999998-1999
Q ss_pred CCCCEEEEEEECCCCCEEE
Q ss_conf 6988899984079830377
Q gi|254781019|r 297 LAGKRVGFFSYGSGCVAEF 315 (396)
Q Consensus 297 ~~G~rIll~syGsG~~a~~ 315 (396)
++||+|+++|||+|.....
T Consensus 67 ~~Gd~vll~~~G~G~s~~~ 85 (90)
T pfam08541 67 KPGDLVLLVGFGAGLTWGA 85 (90)
T ss_pred CCCCEEEEEEECCCHHHEE
T ss_conf 9999899998721041179
No 28
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=99.47 E-value=3.8e-11 Score=88.30 Aligned_cols=191 Identities=19% Similarity=0.148 Sum_probs=127.8
Q ss_pred CCCCHHHHHHHHHHHHHHHCC--HHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHH
Q ss_conf 985999999999999997279--578689999457887546005888863202687735898414203588899878999
Q gi|254781019|r 47 PDEDIVTMAAAAALPIMQNQD--KNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACAL 124 (396)
Q Consensus 47 ~~Ed~~tmA~~Aa~~~L~~~~--~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~ 124 (396)
.+.+..+|++.|++++|++++ |++||.+++++..+.....-.+..+...+|+.+ +.++.+..+|.++..++..|...
T Consensus 12 ~~~s~~eL~~~a~~~Al~dagi~~~~ID~v~~g~~~~~~~~~~~~~~~a~~~G~~~-~~~~~v~~~c~Sg~~ai~~Aa~~ 90 (375)
T cd00829 12 SDRSPLELAAEAARAALDDAGLEPADIDAVVVGNAAGGRFQSFPGALIAEYLGLLG-KPATRVEAAGASGSAAVRAAAAA 90 (375)
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCHHHHCEEEEEECCCCCCCCHHHHHHHHHCCCCC-CCEEEECCCCHHHHHHHHHHHHH
T ss_conf 99699999999999999983919899499999912875534769999999829999-86588689886999999999999
Q ss_pred HHCCCCCEEEEEECCCCCCCCCCCC-------------------------------------------------------
Q ss_conf 9739997699950332014588875-------------------------------------------------------
Q gi|254781019|r 125 VAKSPERKVLIVASDVARYDLGSSG------------------------------------------------------- 149 (396)
Q Consensus 125 i~sg~~~~aLVV~sD~~~~~~~~~~------------------------------------------------------- 149 (396)
|++|..+.+|+++.|..+..+....
T Consensus 91 I~~G~~~~vl~~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a~~~~~~~g~~re~~~~~a~~~~~~A~ 170 (375)
T cd00829 91 IASGLADVVLVVGAEKMSDVPTGDEAGGRASDLEWEGPEPPGGLTPPALYALAARRYMHRYGTTREDLAKVAVKNHRNAA 170 (375)
T ss_pred HHCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf 97799998999987516778765554445677203332024466578999999999999979799999999999998644
Q ss_pred -------------------C----C-------CCCCCEEEEEECCCCCCCEE--EE--CCCCCCCCCCCCCCCCCCCCEE
Q ss_conf -------------------3----3-------47830246884268763035--31--0001567865112758875423
Q gi|254781019|r 150 -------------------E----P-------TQGCGAVAILISSQTSILEI--ED--ITGIYTNDCMDFWRPNYRRTAL 195 (396)
Q Consensus 150 -------------------~----~-------t~GaGA~Allv~~~~~~~~~--~~--~~~~~~~~~~df~rp~~~~~~~ 195 (396)
+ | ...|||+|+++.+....... .. ..+.. ...+.+-+...+.
T Consensus 171 ~np~A~~~~~~t~e~~~~~~~i~~Pl~~~~~~~~~DGAaa~vl~s~~~A~~~~~~p~~i~g~~--~~~~~~~~~~~~~-- 246 (375)
T cd00829 171 RNPYAQFRKPITVEDVLNSRMIADPLRLLDCCPVSDGAAAVVLASEERARELTDRPVWILGVG--AASDTPSLSERDD-- 246 (375)
T ss_pred CCCCCCCCCCCCHHHHHCCCCCCCCCCHHHCCCCCCCCEEEEEECHHHHHHCCCCCEEEEEEE--EEECCCCCCCCCC--
T ss_conf 286120258858999823476446621431576666405899963999987699937999999--9952654356785--
Q ss_pred ECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCCHHHHHHHHHHCC
Q ss_conf 566016989999999999999996298821101233114540578888864110
Q gi|254781019|r 196 VDGKYSTKIYLQSLEAVWHDYQKNKGHDFNDFQYFCYHQPFTRMAEKAHIRLSK 249 (396)
Q Consensus 196 ~dg~~~~~~y~~~~~~a~~~~l~~~g~~~~did~~v~H~p~~k~~~~~~~~l~~ 249 (396)
.........+.+++++++|++++|||.|=+|-+|+-++....+.+..
T Consensus 247 -------~~~~~~~~~A~~~al~~aGl~~~DiD~~Ei~eaFa~~~l~~~e~lGl 293 (375)
T cd00829 247 -------FLSLDAARLAARRAYKMAGITPDDIDVAELYDCFTIAELLALEDLGF 293 (375)
T ss_pred -------CCCCHHHHHHHHHHHHHCCCCHHHCCEEEECCCCHHHHHHHHHHCCC
T ss_conf -------22232599999999998199978765642015766999999998099
No 29
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=99.45 E-value=7.2e-12 Score=92.78 Aligned_cols=215 Identities=16% Similarity=0.137 Sum_probs=134.3
Q ss_pred HHHHHHHHHHHHHHHCC--HHHCC----EEEEECCCCCCC---------------------CHHHHHHHHHHHCCCCCCE
Q ss_conf 99999999999997279--57868----999945788754---------------------6005888863202687735
Q gi|254781019|r 51 IVTMAAAAALPIMQNQD--KNLID----TLFFATESSVDQ---------------------SKSAAIWLHKLLGLNSSCR 103 (396)
Q Consensus 51 ~~tmA~~Aa~~~L~~~~--~~~Id----~li~~T~t~~~~---------------------~~~~a~~v~~~Lgl~~~~~ 103 (396)
+.-+|+.|+++||++++ ++++. -|+++|..+.+. .+..+..|...||+...
T Consensus 11 vsl~al~aa~eAl~dAGl~~~~~~~~r~GV~~Gs~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~gl~Gp-- 88 (332)
T cd00825 11 VSILGFEAAERAIADAGLSREYQKNPIVGVVVGTGGGSPRFQVFGADAMRAVGPYVVTKAMFPGASGQIATPLGIHGP-- 88 (332)
T ss_pred HHHHHHHHHHHHHHHCCCCHHHCCCCCEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC--
T ss_conf 999999999999997599934457888899999688318889853123223686424665534899999999689896--
Q ss_pred EEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC----------CCCC-----------CCCCCCCCEEEEEE
Q ss_conf 89841420358889987899997399976999503320145----------8887-----------53347830246884
Q gi|254781019|r 104 VVELKQACYSATCALHMACALVAKSPERKVLIVASDVARYD----------LGSS-----------GEPTQGCGAVAILI 162 (396)
Q Consensus 104 ~~Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~----------~~~~-----------~~~t~GaGA~Allv 162 (396)
++-+..+|++++.||..|..+|++|..+.+||.++|..... ..++ +=+..|.||+++++
T Consensus 89 ~~tv~taCaS~l~Ai~~A~~~i~~G~~d~aivgg~~~~~~~~~~~~~~~~~~~~~~~~~rpFd~~~~G~v~gEGa~~lvL 168 (332)
T cd00825 89 AYDVSAACAGSLHALSLAADAVQNGKQDIVLAGGSEELAAPMDCEFDAMGALSTPEKASRTFDAAADGFVFGDGAGALVV 168 (332)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCHHHHH
T ss_conf 30313541688999999999998389987462031211798999999972778989887888788997200265403554
Q ss_pred CCCCC-------CCEEEECCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCC
Q ss_conf 26876-------30353100015678651127588754235660169899999999999999962988211012331145
Q gi|254781019|r 163 SSQTS-------ILEIEDITGIYTNDCMDFWRPNYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHDFNDFQYFCYHQP 235 (396)
Q Consensus 163 ~~~~~-------~~~~~~~~~~~~~~~~df~rp~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~~did~~v~H~p 235 (396)
++.+. +......++... +.. . .....| -.+.+.+++++.+++.+++++||||+..|..
T Consensus 169 e~~~~A~~rg~~i~a~i~g~~~~~-dg~---~-~~~~~p----------~~~~~~~ai~~Al~~agi~p~~I~yI~ahgt 233 (332)
T cd00825 169 EELEHALARGAHIYAEIVGTAATI-DGA---G-MGAFAP----------SAEGLARAAKEALAVAGLTVWDIDYLVAHGT 233 (332)
T ss_pred HHHHHHHHCCCCEEEEECCCEEEC-CCC---C-CCCCCC----------CHHHHHHHHHHHHHHCCCCCCCCCEEEECCC
T ss_conf 008888752896203311345877-898---7-888797----------9999999999999984988200147991778
Q ss_pred CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
Q ss_conf 4057888886411024544100134555433344453238543233899999999
Q gi|254781019|r 236 FTRMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALISLL 290 (396)
Q Consensus 236 ~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~slL 290 (396)
+.+..+....+.......+ ...+....-..+||+-.||=.+.|...+
T Consensus 234 Gt~~~D~~E~~Al~~~fg~--------~~~~v~S~Ks~~GH~~~AsG~~~li~~~ 280 (332)
T cd00825 234 GTPIGDVKELKLLRSEFGD--------KSPAVSATKAMTGNLSSAAVVLAVDEAV 280 (332)
T ss_pred CCCCCCHHHHHHHHHHHCC--------CCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 6855559999999998578--------9982105745644552656999999999
No 30
>pfam08392 FAE1_CUT1_RppA FAE1/Type III polyketide synthase-like protein. The members of this family are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region featured in this family contains the active site residues, as well as motifs involved in substrate binding.
Probab=99.45 E-value=6.7e-12 Score=93.00 Aligned_cols=165 Identities=14% Similarity=0.187 Sum_probs=118.5
Q ss_pred CCEEEEEEEECCCE--EECHHHHHHH---CC-CCH------HHHHHHCCCCEEEECCCC-----CC-HH--------HHH
Q ss_conf 62066888734890--4559999987---09-998------797630383246655998-----59-99--------999
Q gi|254781019|r 2 AIGIEDISFYTTNQ--YLDLSVIAEK---YR-LDV------AKFYVGIGQERMSVLNPD-----ED-IV--------TMA 55 (396)
Q Consensus 2 ~vGI~~i~~y~P~~--~v~~~~l~~~---~g-~~~------~k~~~~lGi~~r~v~~~~-----Ed-~~--------tmA 55 (396)
.|....++.|-|+. +++.+.+.++ .+ .++ .|+....|+.+....++. ++ +. ..-
T Consensus 8 ~vYLvDfaC~kp~~~~kv~~~~~~e~~~~~~~f~~~s~~F~~kil~rSGlG~eTy~P~~~~~~p~~~s~~~ar~Eae~v~ 87 (290)
T pfam08392 8 PVYLVDYACYKPPDDRKVSTETFMEHIRRNGKFDEESLDFQRKILERSGLGEETYVPRSVLEIPPNPTMAEAREEAEEVM 87 (290)
T ss_pred CEEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHH
T ss_conf 88998553207972031699999999986589986899999999996489998857825425899987999999999999
Q ss_pred HHHHHHHHHHC--CHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECC-CHHHHHHHHHHHHHHHHCCCCCE
Q ss_conf 99999999727--9578689999457887546005888863202687735898414-20358889987899997399976
Q gi|254781019|r 56 AAAALPIMQNQ--DKNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQ-ACYSATCALHMACALVAKSPERK 132 (396)
Q Consensus 56 ~~Aa~~~L~~~--~~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~-aC~g~~~AL~~A~~~i~sg~~~~ 132 (396)
..|..++|++. +|+|||.||+-. |..--.||.++.|.++.++..++..|.+.. +|++++-++.+|.++++.+++.+
T Consensus 88 f~avd~Lf~ktgv~P~dIdiLVvNc-Slf~PtPSLsamivNrykmR~di~s~nLsGMGCSAglIsIdLAk~lL~~~~ns~ 166 (290)
T pfam08392 88 FGAVDELFAKTGVRPRDIGILVVNC-SLFNPTPSLSAMIVNRYKMRGDIKSYNLSGMGCSAGLISIDLAKDLLQVHPNTY 166 (290)
T ss_pred HHHHHHHHHHCCCCHHHCCEEEEEC-CCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCE
T ss_conf 9999999997399876899999967-788888528999988606864300633667651134757999999998489965
Q ss_pred EEEEECCCCCCCCCCCCC-------CCCCCCEEEEEECCCCC
Q ss_conf 999503320145888753-------34783024688426876
Q gi|254781019|r 133 VLIVASDVARYDLGSSGE-------PTQGCGAVAILISSQTS 167 (396)
Q Consensus 133 aLVV~sD~~~~~~~~~~~-------~t~GaGA~Allv~~~~~ 167 (396)
||||++|..+...-...+ ..+..|++|++++.++.
T Consensus 167 ALVvSTE~it~n~Y~G~~rsmLl~NcLFR~GgAAiLLSN~~~ 208 (290)
T pfam08392 167 ALVVSTENITPNWYAGNDRSMLLPNCLFRMGGAAILLSNKPA 208 (290)
T ss_pred EEEEEEEECCCCCCCCCCHHHHCCCCCCCCCCEEEEEECCCC
T ss_conf 999985304544535873665014011357714798305844
No 31
>PRK06059 lipid-transfer protein; Provisional
Probab=99.44 E-value=2e-10 Score=83.87 Aligned_cols=266 Identities=15% Similarity=0.117 Sum_probs=149.4
Q ss_pred HCCCCEEEECCCCCCHHHHHHHHHHHHHHHCC--HHHCCEEEEECCCCCCC-CHHHHHHHHHHHCCCCCCEEEEECCCHH
Q ss_conf 03832466559985999999999999997279--57868999945788754-6005888863202687735898414203
Q gi|254781019|r 36 GIGQERMSVLNPDEDIVTMAAAAALPIMQNQD--KNLIDTLFFATESSVDQ-SKSAAIWLHKLLGLNSSCRVVELKQACY 112 (396)
Q Consensus 36 ~lGi~~r~v~~~~Ed~~tmA~~Aa~~~L~~~~--~~~Id~li~~T~t~~~~-~~~~a~~v~~~Lgl~~~~~~~Di~~aC~ 112 (396)
|.|+.+ +...+.+..+|+++|++++|++++ ++|||.+++++...... .......+.+.||+. ..+...+..+|.
T Consensus 10 GvG~t~--~gr~~r~~~~l~~eA~~~AL~DAGl~~~dVD~v~~~~~~~~~~~~~~~~~~~a~~lGl~-g~p~~~v~~~~a 86 (399)
T PRK06059 10 GAGMHP--WGKWGRDFTEYGVVAARAALADAGLDWRQVQLVAGADTIRNGYPGFVAGATFAQKLGWN-GVPVTSSYAACA 86 (399)
T ss_pred EECCCC--CCCCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCCCCCCCCCCHHHHHHHHCCCC-CCCCCCCCCCHH
T ss_conf 823466--56389798999999999999855999899468843034566777532269999975998-863112116248
Q ss_pred HHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCC---------CC-------------C----------------------
Q ss_conf 588899878999973999769995033201458---------88-------------7----------------------
Q gi|254781019|r 113 SATCALHMACALVAKSPERKVLIVASDVARYDL---------GS-------------S---------------------- 148 (396)
Q Consensus 113 g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~~---------~~-------------~---------------------- 148 (396)
++..|+..|...|++|..+.+||+++|...... .. +
T Consensus 87 sG~~a~~~A~~~I~sG~~d~vlvvg~e~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~p~~~Al~a~rym~~yG~t~e~lA 166 (399)
T PRK06059 87 SGSQALQSARAQILAGFCDVALVIGADTTPKGFFAPVGGERKNDPDWQRFHLIGATNTVYFALLARRRMDLYGATVEDFA 166 (399)
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHH
T ss_conf 99999999999998499878999403357876544554556677114443014785088999999999999797999999
Q ss_pred ---------------------------------CCC-------CCCCCEEEEEECCCCC----------CCEEEECCCCC
Q ss_conf ---------------------------------533-------4783024688426876----------30353100015
Q gi|254781019|r 149 ---------------------------------GEP-------TQGCGAVAILISSQTS----------ILEIEDITGIY 178 (396)
Q Consensus 149 ---------------------------------~~~-------t~GaGA~Allv~~~~~----------~~~~~~~~~~~ 178 (396)
.+| .-.|||+|+++..+.. ...+... +..
T Consensus 167 ~vavk~~~~a~~NP~A~~r~~it~edvl~s~~Ia~PL~l~dc~~~sDGAaAvVl~s~e~A~~~~~~~~~~~~i~~~-~~~ 245 (399)
T PRK06059 167 QVKVKNARHGLDNPNARYRKEVSVEDVLASPVVSDPLRLLDICATSDGAAALIVASKSFAEKHLGSVAGVPSVRAI-STV 245 (399)
T ss_pred HHHHHHHHHHHHCCHHHCCCCCCHHHHCCCCHHHHCCCCCCCCCCCCCEEEEEEECHHHHHHHCCCCCCCEEEEEE-EEE
T ss_conf 9999999877109286668998878872382645261551317888850899995599998722356788399999-840
Q ss_pred CCCCCCCCCCCCCCCEEECCHHHHHHHHH-HHHHHHHHHHHHCCCCHHHCCEEEECCCCCHHHHHHHHHHCCHHHHHHHH
Q ss_conf 67865112758875423566016989999-99999999999629882110123311454057888886411024544100
Q gi|254781019|r 179 TNDCMDFWRPNYRRTALVDGKYSTKIYLQ-SLEAVWHDYQKNKGHDFNDFQYFCYHQPFTRMAEKAHIRLSKIVHQNLSV 257 (396)
Q Consensus 179 ~~~~~df~rp~~~~~~~~dg~~~~~~y~~-~~~~a~~~~l~~~g~~~~did~~v~H~p~~k~~~~~~~~l~~~~~~~~~~ 257 (396)
+ +.+....|...+.. .+.......... .-..+.+...+++|++++|||.+-.|-+|.-+..-....+.... +....
T Consensus 246 ~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~a~~ay~~AGi~p~DiDvae~yD~ft~~~l~~lE~lGf~~-~Ge~~ 322 (399)
T PRK06059 246 T-PQYPQHLPELPDIA-TDSTAAVPAPERVFKDQILDAAYAEAGIGPEDLSLAEVYDLSTALELDWYEHLGLCP-KGEAE 322 (399)
T ss_pred C-CCCCCCCCCCCCCC-CCCHHCCCCHHHHHHHHHHHHHHHHCCCCHHHCEEEEECCCCCHHHHHHHHHCCCCC-CCCHH
T ss_conf 5-75443332333212-221010233155678999999999829997887277531666098999999849978-98379
Q ss_pred HHHH---------HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH----CC-CCCCCCEEEEEEECC
Q ss_conf 1345---------5543334445323854323389999999971----57-436988899984079
Q gi|254781019|r 258 AEIE---------KAIGITTLYNRLIGNSYTASLYIALISLLDH----SS-ENLAGKRVGFFSYGS 309 (396)
Q Consensus 258 ~~~e---------~~~~~~~~~~~~~GN~~SASi~l~L~slLe~----~~-~~~~G~rIll~syGs 309 (396)
..++ -.++++-=+.. .|+.+.++=...+.++..| ++ +.-+|-|++|+.-+.
T Consensus 323 ~~v~~G~~~~~G~lPvNtsGGlls-~Ghp~gatG~~~~~E~~~QLrG~Ag~rQV~~a~~gl~~n~G 387 (399)
T PRK06059 323 ALLRSGATTLGGRIPVNPSGGLAC-FGEAIPAQAIAQVCELTWQLRGQATGRQVEGAKVGITANQG 387 (399)
T ss_pred HHHHCCCCCCCCCCCCCCCCCHHC-CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCC
T ss_conf 999779966799703558860211-89966157999999999997488767738986178874778
No 32
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=99.40 E-value=2.6e-09 Score=76.90 Aligned_cols=104 Identities=17% Similarity=0.158 Sum_probs=84.4
Q ss_pred HCCCCEEEECCCCCCHHHHHHHHHHHHHHHCC--HHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHH
Q ss_conf 03832466559985999999999999997279--5786899994578875460058888632026877358984142035
Q gi|254781019|r 36 GIGQERMSVLNPDEDIVTMAAAAALPIMQNQD--KNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYS 113 (396)
Q Consensus 36 ~lGi~~r~v~~~~Ed~~tmA~~Aa~~~L~~~~--~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g 113 (396)
|.|+.+.. -.++.+..+|+++|+++||++++ ++|||.+++++..........+..+...||+. ..+..-+.++|.+
T Consensus 13 GvG~t~~g-r~~~~s~~~L~~eA~~~AL~DAGl~~~dID~~~~g~~~~~~~~~~~~~~l~~~lg~~-~~p~~~v~~~~as 90 (400)
T PRK06157 13 GMGCSKFG-ERWDAGGEDLMVEAYQEAIADAGIEPKQIEAAWFGTHYDEIGTGKSGTPLSMALRLP-NIPVTRVENFCAT 90 (400)
T ss_pred EEEEECCC-CCCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCHHHHHHHHHCCCC-CCCEEEECCCCHH
T ss_conf 85572055-079979999999999999997399989989998981477544552579999961899-8733786477449
Q ss_pred HHHHHHHHHHHHHCCCCCEEEEEECCCC
Q ss_conf 8889987899997399976999503320
Q gi|254781019|r 114 ATCALHMACALVAKSPERKVLIVASDVA 141 (396)
Q Consensus 114 ~~~AL~~A~~~i~sg~~~~aLVV~sD~~ 141 (396)
+..|+..|...|++|....+||++.|..
T Consensus 91 G~~al~~A~~aI~sG~~d~vlv~g~ek~ 118 (400)
T PRK06157 91 GTEAFRGAVYAVASGAYDIALALGVEKL 118 (400)
T ss_pred HHHHHHHHHHHHHCCCCCEEEEEEEECC
T ss_conf 9999999999998098878999645425
No 33
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=99.39 E-value=2.1e-09 Score=77.44 Aligned_cols=275 Identities=14% Similarity=0.086 Sum_probs=150.2
Q ss_pred HCCCCEEEECCCCCCHHHHHHHHHHHHHHHCC--HHHCCEEEEECCCCC-CCCHHHHHHHHHHHCCCCCCEEEEECCCHH
Q ss_conf 03832466559985999999999999997279--578689999457887-546005888863202687735898414203
Q gi|254781019|r 36 GIGQERMSVLNPDEDIVTMAAAAALPIMQNQD--KNLIDTLFFATESSV-DQSKSAAIWLHKLLGLNSSCRVVELKQACY 112 (396)
Q Consensus 36 ~lGi~~r~v~~~~Ed~~tmA~~Aa~~~L~~~~--~~~Id~li~~T~t~~-~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~ 112 (396)
|.|+....-..++.+.-.|+.+|++++|++++ ++|||.++++..+.. ...--....+...||+.+ .++.-+..+|.
T Consensus 8 GvG~T~f~k~~~~~~~~~l~~eA~~~AL~DAGl~~~dIDg~v~~~~~~~~~~~~~~g~~~~~~lGl~~-~p~~~ve~~ca 86 (415)
T PRK06365 8 AGGVTKFVKASPNMDFRLRVKKAFDYAMNDAGLTLADIDGSVASYFSDHFQRQLMAGIMVQDYLGLVP-KPSKRIEGGGA 86 (415)
T ss_pred EEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCCHHHHHHHHCCCCC-CCEEEEECCCH
T ss_conf 84236456789998899999999999999759998996988898417866421005589999718888-64257737728
Q ss_pred HHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCC------------CC----C----------------------------
Q ss_conf 588899878999973999769995033201458------------88----7----------------------------
Q gi|254781019|r 113 SATCALHMACALVAKSPERKVLIVASDVARYDL------------GS----S---------------------------- 148 (396)
Q Consensus 113 g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~~------------~~----~---------------------------- 148 (396)
++..|+..|...|++|....+||++.|..+... +. +
T Consensus 87 sg~~a~~~A~~~I~sG~~d~vlv~G~ek~s~~~~~~~~~~~~~~~d~~~e~p~g~~~~~~~Al~a~rym~~yG~t~e~lA 166 (415)
T PRK06365 87 TGGLAFQAGYEEIASGRMDVVAVYGFETMSHVNTWKGNEFIALASDTNFDYPIGGFYTGYYAMMAVRHMYEFGTTVEQMA 166 (415)
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHH
T ss_conf 99999999999997087878999741145678866653111025665534545554488999999999998698899999
Q ss_pred ---------------------------------CCC-------CCCCCEEEEEECCCCC-------CCEEEECCCCCCCC
Q ss_conf ---------------------------------533-------4783024688426876-------30353100015678
Q gi|254781019|r 149 ---------------------------------GEP-------TQGCGAVAILISSQTS-------ILEIEDITGIYTND 181 (396)
Q Consensus 149 ---------------------------------~~~-------t~GaGA~Allv~~~~~-------~~~~~~~~~~~~~~ 181 (396)
..| .-.|||+|+++.++.. .+.+.. .+..+..
T Consensus 167 ~Vavk~r~~A~~NP~A~~~~~iTvedvl~s~~Ia~PL~lldcc~~sDGAaAvVl~see~Ar~~~~~pV~I~g-~g~~~~~ 245 (415)
T PRK06365 167 KVSVKNHGNAIHNPYAQSPMKLTVEDVRKAPMVSYPLTRLDVCAMSDGAAVAILASEDKAFEITDHPVLIKA-IGTGTDT 245 (415)
T ss_pred HHHHHHHHHHCCCHHHHCCCCCCHHHHHCCCCCCCCCHHHCCCCCCCCEEEEEEECHHHHHHCCCCCEEEEE-EEEECCC
T ss_conf 999998775525937648888998998318844367202126888886499999458988655799779999-9971254
Q ss_pred CCCCCCC--------CCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCH--HHCCEEEECCCCCHHHHHHHHHHCCHH
Q ss_conf 6511275--------887542356601698999999999999999629882--110123311454057888886411024
Q gi|254781019|r 182 CMDFWRP--------NYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHDF--NDFQYFCYHQPFTRMAEKAHIRLSKIV 251 (396)
Q Consensus 182 ~~df~rp--------~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~--~did~~v~H~p~~k~~~~~~~~l~~~~ 251 (396)
..-..|| ........+-.+....-+.....+.++..++.|+++ +|||.+-.|=+|.-+..-....+....
T Consensus 246 ~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Aa~~Ay~~AGi~~p~~DiDv~ev~D~Ft~~el~~lE~lGfc~ 325 (415)
T PRK06365 246 MRLADRPFGEVPLLPNENPSDYKNLKYPGVHSFRAGRMAAKEAYERANITDPLNDLDLIELHDAYTSSEIQTYEDLGLCK 325 (415)
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCC
T ss_conf 20034544445444456720110234554100279999999999974999961458779984576299999999849988
Q ss_pred HHHHHHHHH---------HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH-CCC----------CCCCCEEEEEEE--CC
Q ss_conf 544100134---------55543334445323854323389999999971-574----------369888999840--79
Q gi|254781019|r 252 HQNLSVAEI---------EKAIGITTLYNRLIGNSYTASLYIALISLLDH-SSE----------NLAGKRVGFFSY--GS 309 (396)
Q Consensus 252 ~~~~~~~~~---------e~~~~~~~~~~~~~GN~~SASi~l~L~slLe~-~~~----------~~~G~rIll~sy--Gs 309 (396)
+......+ +-.++++-=+.. .|+...|+=...+.++..| .|+ .-++-|++|.-= |.
T Consensus 326 -~Geg~~~v~~G~~~~~G~lPvN~sGGlls-~Ghp~GatG~~q~vE~~~QLrG~a~~r~~~~~~QV~~a~~al~~~~GG~ 403 (415)
T PRK06365 326 -YGEGGQFIDEGKPELDGKIPVNPSGGLLA-AGHPVGATGIMQAVFMFWQLQHTIKKHFHDDYLQVPNAKRGLIHSHAGT 403 (415)
T ss_pred -CCCHHHHHHCCCCCCCCCCCCCCCCCHHC-CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCC
T ss_conf -98389999779966899712678852330-7865651399999999999617502367775456898568988357755
Q ss_pred CCCEE
Q ss_conf 83037
Q gi|254781019|r 310 GCVAE 314 (396)
Q Consensus 310 G~~a~ 314 (396)
|..+.
T Consensus 404 ~~~~~ 408 (415)
T PRK06365 404 GTYVT 408 (415)
T ss_pred CCEEE
T ss_conf 40179
No 34
>PRK08256 lipid-transfer protein; Provisional
Probab=99.39 E-value=1.4e-09 Score=78.62 Aligned_cols=93 Identities=17% Similarity=0.190 Sum_probs=74.8
Q ss_pred CCCCCHHHHHHHHHHHHHHHCC--HHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHH
Q ss_conf 9985999999999999997279--57868999945788754600588886320268773589841420358889987899
Q gi|254781019|r 46 NPDEDIVTMAAAAALPIMQNQD--KNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACA 123 (396)
Q Consensus 46 ~~~Ed~~tmA~~Aa~~~L~~~~--~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~ 123 (396)
..+.+..+|+++|++.+|++++ |++||.++++...+...... .....+|+. .++++.++.+|.++..|+..|..
T Consensus 17 ~~~~~~~~L~~eA~~~AL~dAGi~~~~ID~v~~G~~~~~~~~~~---~a~~~~g~~-g~P~~tV~~~CaSG~~Ai~~Aa~ 92 (391)
T PRK08256 17 GASWDYPDMAAEAGRAALADAGIDYDEVQQAYVGYVYGDSTSGQ---RALYEVGMT-GIPVVNVNNNCSTGSTALFLARQ 92 (391)
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCHH---HHHHHCCCC-CCCEEEECCCCHHHHHHHHHHHH
T ss_conf 99999999999999999998298989989998970368750059---999961336-99658887876169999999999
Q ss_pred HHHCCCCCEEEEEECCCCC
Q ss_conf 9973999769995033201
Q gi|254781019|r 124 LVAKSPERKVLIVASDVAR 142 (396)
Q Consensus 124 ~i~sg~~~~aLVV~sD~~~ 142 (396)
.|++|....+|+++.|.++
T Consensus 93 ~I~sG~advvla~G~E~Ms 111 (391)
T PRK08256 93 AVASGAADCALALGFEQMQ 111 (391)
T ss_pred HHHCCCCCEEEEEEEECCC
T ss_conf 9976998889996440357
No 35
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=99.38 E-value=6e-10 Score=80.84 Aligned_cols=95 Identities=15% Similarity=0.151 Sum_probs=77.8
Q ss_pred CCCCHHHHHHHHHHHHHHHCC--HHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHH
Q ss_conf 985999999999999997279--578689999457887546005888863202687735898414203588899878999
Q gi|254781019|r 47 PDEDIVTMAAAAALPIMQNQD--KNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACAL 124 (396)
Q Consensus 47 ~~Ed~~tmA~~Aa~~~L~~~~--~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~ 124 (396)
++-+...|+.+|++.+|++++ |+|||.+++++.......-..+..+...+|+.. ...+-+..+|.++..|+..|...
T Consensus 17 ~~~s~~eL~~eA~~~Al~dAgl~~~dVD~v~~G~~~~~g~~~~~~~~~a~~~Gl~~-~~~~~v~~~caSG~~av~~A~~~ 95 (385)
T PRK12578 17 DDVSIQELAWESIKEALEDAGITQKDVDLVVIGSTAYRGVELYPAPPVSEYSGLTG-KVPLRVEAACATGSAAAFTAYTS 95 (385)
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCHHHCCEEEEECCCCCCCCCCHHHHHHHHCCCCC-CCCEEECCCCHHHHHHHHHHHHH
T ss_conf 99799999999999999984929899599999456755522362899999759989-88668816677899999999999
Q ss_pred HHCCCCCEEEEEECCCCC
Q ss_conf 973999769995033201
Q gi|254781019|r 125 VAKSPERKVLIVASDVAR 142 (396)
Q Consensus 125 i~sg~~~~aLVV~sD~~~ 142 (396)
|++|....+|+++.|..+
T Consensus 96 I~sG~~dvvl~~G~e~ms 113 (385)
T PRK12578 96 IASGLADIAMAVGVDKMT 113 (385)
T ss_pred HHHCCCCEEEEEEEEECC
T ss_conf 983859999994552057
No 36
>PRK06363 consensus
Probab=99.37 E-value=4.3e-10 Score=81.77 Aligned_cols=249 Identities=16% Similarity=0.149 Sum_probs=145.4
Q ss_pred CCCCHHHHHHHHHHHHHHHCC--HHHCCEEEEECCCCCCC--CHHHHHHHHHHHCCCC-CCEEEEECCCHHHHHHHHHHH
Q ss_conf 985999999999999997279--57868999945788754--6005888863202687-735898414203588899878
Q gi|254781019|r 47 PDEDIVTMAAAAALPIMQNQD--KNLIDTLFFATESSVDQ--SKSAAIWLHKLLGLNS-SCRVVELKQACYSATCALHMA 121 (396)
Q Consensus 47 ~~Ed~~tmA~~Aa~~~L~~~~--~~~Id~li~~T~t~~~~--~~~~a~~v~~~Lgl~~-~~~~~Di~~aC~g~~~AL~~A 121 (396)
++.+..+|+++|++.+|++++ |++||.+++++.+.... ....+..+...+|+.+ .+++.-++.+|.++..|+..|
T Consensus 18 ~~~s~~~L~~ea~~~Al~dAgl~~~dID~v~~g~~~~~~~~~~~~~~~~~a~~~Gl~~~~vp~~~v~~~C~SG~~Ai~~A 97 (387)
T PRK06363 18 WERSFRDLIVEAGIKAIEDANVSGEDIDAMYVGNMSGGRFVGQEHIGALIADYAGLNTLPIPATRVEAACASGGLALRQA 97 (387)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHH
T ss_conf 99798999999999999980979899999999825754344613099999997399888765488866317999999999
Q ss_pred HHHHHCCCCCEEEEEECCCCCCCCCCCC----------C-----------------------------------------
Q ss_conf 9999739997699950332014588875----------3-----------------------------------------
Q gi|254781019|r 122 CALVAKSPERKVLIVASDVARYDLGSSG----------E----------------------------------------- 150 (396)
Q Consensus 122 ~~~i~sg~~~~aLVV~sD~~~~~~~~~~----------~----------------------------------------- 150 (396)
...|++|....+|+.+.|..+..+.... +
T Consensus 98 a~~I~sG~~dvvlagG~E~ms~~~~~~~~~~~~~d~~~~~~~g~~~~~~~a~~a~~~~~~yG~tre~~a~~A~~s~~~A~ 177 (387)
T PRK06363 98 VLAVASGYHDIVLAAGVEKMTDVGDATSALATAADREWEAFVGATFPSLYAMIAKRHMHEYGTTREQLAQVAVKNHENGA 177 (387)
T ss_pred HHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf 99997499868999601367788765542222445352001377518999999999999979699999999998166454
Q ss_pred ------------------------C-------CCCCCEEEEEECCCCC-------CCEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf ------------------------3-------4783024688426876-------3035310001567865112758875
Q gi|254781019|r 151 ------------------------P-------TQGCGAVAILISSQTS-------ILEIEDITGIYTNDCMDFWRPNYRR 192 (396)
Q Consensus 151 ------------------------~-------t~GaGA~Allv~~~~~-------~~~~~~~~~~~~~~~~df~rp~~~~ 192 (396)
| .-.|||+|+++.+... ++.+.. .+..+....-..+|.
T Consensus 178 ~np~a~~~~~~t~d~~~~~~~i~~pl~~~d~s~~sDGAaAvvl~s~e~A~~~~~~pv~i~g-~~~~~~~~~~~~~~~--- 253 (387)
T PRK06363 178 KNPYAQFRNEITVDQVLNSSMVADPLRLLDCSPVSDGAAAVIVCPAEKAREYTDTPIYIKA-SAQASDTIALHDRKD--- 253 (387)
T ss_pred CCCCCCCCCCCCHHHHCCCCCCCCCCHHHHCCCCCCCCEEEEECCHHHHHHCCCCCEEEEE-EEEEECCCCCCCCCC---
T ss_conf 2850015787547552266656665315552466888348997159999865999579999-999835544567886---
Q ss_pred CEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHH---------HH
Q ss_conf 423566016989999999999999996298821101233114540578888864110245441001345---------55
Q gi|254781019|r 193 TALVDGKYSTKIYLQSLEAVWHDYQKNKGHDFNDFQYFCYHQPFTRMAEKAHIRLSKIVHQNLSVAEIE---------KA 263 (396)
Q Consensus 193 ~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~~did~~v~H~p~~k~~~~~~~~l~~~~~~~~~~~~~e---------~~ 263 (396)
.+ .+.....+.++.++++|++++|||.+=.|-+|..+.....+.+... .+......++ .+
T Consensus 254 --~~--------~~~~~~~a~~~a~~~AGl~~~DiD~~Ei~eaFa~~~l~~~e~lGl~-~~ge~~~~~~~g~~~~~g~~p 322 (387)
T PRK06363 254 --IT--------TLDATVVASKKAYEMAGLTPKDIDVAEVHDCFTIAELCAIEDLGFC-KKGEAGKVTEEGKTAIGGDIP 322 (387)
T ss_pred --CC--------CCCHHHHHHHHHHHHHCCCHHHCCEEEECCCCHHHHHHHHHHCCCC-CCCCHHHHHHCCCCCCCCCCC
T ss_conf --44--------5771699999999984999888757641110168899999981998-566157898768854599960
Q ss_pred HHHHHHHHHHCCCCCCCH---HHHHHHHHHHH-C-CCCCCCCEEEEEEECCCC
Q ss_conf 433344453238543233---89999999971-5-743698889998407983
Q gi|254781019|r 264 IGITTLYNRLIGNSYTAS---LYIALISLLDH-S-SENLAGKRVGFFSYGSGC 311 (396)
Q Consensus 264 ~~~~~~~~~~~GN~~SAS---i~l~L~slLe~-~-~~~~~G~rIll~syGsG~ 311 (396)
++++-=.. -.|+-..+| +...+...|.. + ++..++-+++++.=..|.
T Consensus 323 vN~~GG~i-a~GHP~gatG~~~~~e~~~qLrg~ag~~qv~~~~~gl~~~~GG~ 374 (387)
T PRK06363 323 VNPSGGLK-ACGHPVGATGIKQVVEIVWQLRGDAGKRQVDGAEIGMTHNVGGT 374 (387)
T ss_pred EECCHHHH-HCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCH
T ss_conf 71786798-76982317899999999999834213118777778988768866
No 37
>PRK06364 consensus
Probab=99.34 E-value=1.2e-09 Score=78.88 Aligned_cols=252 Identities=14% Similarity=0.181 Sum_probs=147.7
Q ss_pred CCCCHHHHHHHHHHHHHHHCC--HHHCCEEEEECCCCC--CCCHHHHHHHHHHHCCCCC-CEEEEECCCHHHHHHHHHHH
Q ss_conf 985999999999999997279--578689999457887--5460058888632026877-35898414203588899878
Q gi|254781019|r 47 PDEDIVTMAAAAALPIMQNQD--KNLIDTLFFATESSV--DQSKSAAIWLHKLLGLNSS-CRVVELKQACYSATCALHMA 121 (396)
Q Consensus 47 ~~Ed~~tmA~~Aa~~~L~~~~--~~~Id~li~~T~t~~--~~~~~~a~~v~~~Lgl~~~-~~~~Di~~aC~g~~~AL~~A 121 (396)
++.+..+|+++|++.+|++++ ++|||.+++++.... ......+..+...+|+.+. ++++-+..+|.++..|+..|
T Consensus 21 ~~~s~~~L~~eA~~~Al~dAgl~~~dID~v~~~~~~~g~~~~~~~~~~~~a~~~gl~~~~vp~~~V~~~caSG~~Ai~~A 100 (389)
T PRK06364 21 WDKSLRDLAVEAGLEAIKDANIYSKDLQMLYASNSLAGTINEQSNIAALAADFSGIAEEHVPAVRVEASTASGGAAVREA 100 (389)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHH
T ss_conf 99798999999999999880989899899988156665556524399999997599855886699887017899999999
Q ss_pred HHHHHCCCCCEEEEEECCCCCCCCCC------------CC----------------------------------------
Q ss_conf 99997399976999503320145888------------75----------------------------------------
Q gi|254781019|r 122 CALVAKSPERKVLIVASDVARYDLGS------------SG---------------------------------------- 149 (396)
Q Consensus 122 ~~~i~sg~~~~aLVV~sD~~~~~~~~------------~~---------------------------------------- 149 (396)
...|++|....+|+++.|..+...+. ..
T Consensus 101 ~~~I~sG~~d~vla~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~al~a~~y~~~~g~~~e~~a~va~~~~~~ 180 (389)
T PRK06364 101 YLAIKSGEYDVVMVGGVEKMTDIYGHEIIDVQSSILDREWESFNGATPAAMAAIIARRYMHDFNVEREAISMIAVNDHAN 180 (389)
T ss_pred HHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf 99997297778999610003567776544445433330023303548999999999999999696999999999976563
Q ss_pred -------------------------CC-------CCCCCEEEEEECCCCCC-------CEEEECCCCCCCCCCCCCCCCC
Q ss_conf -------------------------33-------47830246884268763-------0353100015678651127588
Q gi|254781019|r 150 -------------------------EP-------TQGCGAVAILISSQTSI-------LEIEDITGIYTNDCMDFWRPNY 190 (396)
Q Consensus 150 -------------------------~~-------t~GaGA~Allv~~~~~~-------~~~~~~~~~~~~~~~df~rp~~ 190 (396)
+| .-.|||+|+++.++... +.+.. .+. ..+.... +
T Consensus 181 A~~nP~A~~r~~~t~e~vl~s~~i~~Pl~~~d~s~~~DGAaAvVl~s~e~a~~~~~~~v~i~~-~~~-~~~~~~~----~ 254 (389)
T PRK06364 181 ASRNPDAQYRNKITVKQVMNSDPVAEPLNVFDCSPISDGASAIILASEDFVKKNRKDGVRILS-SAM-AEDYLAL----H 254 (389)
T ss_pred HHHCCCCCCCCCCCHHHHHCCCCCCCCCCHHHCCCCCCCEEEEEEECHHHHHHCCCCCEEEEE-EEE-ECCCCCC----C
T ss_conf 761960111577678886236876787607445778883179999338999756899759999-999-6245555----7
Q ss_pred CCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHH--------
Q ss_conf 754235660169899999999999999962988211012331145405788888641102454410013455--------
Q gi|254781019|r 191 RRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHDFNDFQYFCYHQPFTRMAEKAHIRLSKIVHQNLSVAEIEK-------- 262 (396)
Q Consensus 191 ~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~~did~~v~H~p~~k~~~~~~~~l~~~~~~~~~~~~~e~-------- 262 (396)
...+.. -+.....+.+..++++|++++|||.+-.|=+|.-+.....+.+..... ......++.
T Consensus 255 ~~~~~~--------~~~~~~~A~~~A~~~AGl~~~DIDl~Ei~DaFa~~~l~~le~lG~~~~-Ge~~~~~~~~~~~~G~~ 325 (389)
T PRK06364 255 SRKSIY--------TLESTKIAARLALDRAGIKSDDVSFLELNDSYSIYGLLELEDLGFAEK-GKAKDLVYDEIKLNGRL 325 (389)
T ss_pred CCCCCC--------CCCCHHHHHHHHHHHHCCCHHHCCEEEECCCCHHHHHHHHHHCCCCCC-CCHHHHHCCCCCCCCCC
T ss_conf 778654--------454089999999998199978861775226554999999998099987-73144315874469984
Q ss_pred HHHHHHHHHHHCCCCCCCHHHHHHHHHHHH----C-CCCCCCCEEEEEE--ECCCCCEE
Q ss_conf 543334445323854323389999999971----5-7436988899984--07983037
Q gi|254781019|r 263 AIGITTLYNRLIGNSYTASLYIALISLLDH----S-SENLAGKRVGFFS--YGSGCVAE 314 (396)
Q Consensus 263 ~~~~~~~~~~~~GN~~SASi~l~L~slLe~----~-~~~~~G~rIll~s--yGsG~~a~ 314 (396)
+++++-=... .||...||=...+.+++.| + ++..++-|+.+.. -|.|..+.
T Consensus 326 pvN~~GG~la-~Ghp~gatG~~~~~ea~~QLrg~ag~rQv~~a~~al~~~~gG~g~~~~ 383 (389)
T PRK06364 326 PVNPSGGLKA-KGNPLGATGVSQFVEAYLQLKGKAGQRQVKSARYGLLHNMAGTGATSV 383 (389)
T ss_pred EECCCCCHHH-CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCEEE
T ss_conf 3738817876-799300679999999999970211034678866999816774421079
No 38
>PRK06158 thiolase; Provisional
Probab=99.33 E-value=1.6e-09 Score=78.13 Aligned_cols=192 Identities=15% Similarity=0.013 Sum_probs=120.7
Q ss_pred HCCCCEEEECCCCCCHHHHHHHHHHHHHHHCC--HHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHH
Q ss_conf 03832466559985999999999999997279--5786899994578875460058888632026877358984142035
Q gi|254781019|r 36 GIGQERMSVLNPDEDIVTMAAAAALPIMQNQD--KNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYS 113 (396)
Q Consensus 36 ~lGi~~r~v~~~~Ed~~tmA~~Aa~~~L~~~~--~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g 113 (396)
|.|+....- .++.+..+|+++|++++|++++ ++|||.+++++... .. ....+.+.||+.+ .....+..+|.+
T Consensus 14 GvG~t~fg~-~~~~s~~eL~~eA~~~Al~DAGi~~~dID~~~~g~~~~--~~--~g~~~a~~lGl~~-~~~~~~~~ggas 87 (384)
T PRK06158 14 GAATAGLGE-APGLSAMELLAQAAVRALADAGLTMADVDGLFTASPDS--AL--WGLSVAEYLGIRP-RFVDGTMIGGSS 87 (384)
T ss_pred EEEECCCCC-CCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCC--CC--HHHHHHHHCCCCC-CEECCCCCCCHH
T ss_conf 755513501-89979999999999999997599999909899971576--65--3999999829998-124366668689
Q ss_pred HHHHHHHHHHHHHCCCCCEEEEEECCCCCCCC-------C-----------CC---------------------------
Q ss_conf 88899878999973999769995033201458-------8-----------87---------------------------
Q gi|254781019|r 114 ATCALHMACALVAKSPERKVLIVASDVARYDL-------G-----------SS--------------------------- 148 (396)
Q Consensus 114 ~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~~-------~-----------~~--------------------------- 148 (396)
+..+|..|...|++|..+.+||+..+..+... + .+
T Consensus 88 ~~~al~~A~~aI~sG~~d~vlV~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~p~~~~Al~a~rym~~yG~t~E~lA~vav 167 (384)
T PRK06158 88 FVSHLLPAALALEAGLCDVALICYGSNQRSAGGKLVSMLDPQPYEAPYKPVNPVTAYALAAARHMHQYGTTREQLAEVAV 167 (384)
T ss_pred HHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH
T ss_conf 99999999999985885389995235555566554335687444432355546889999999999997988999999999
Q ss_pred --------------------------------CC----CCCCCCEEEEEECCCCCC-------CEEEECCCCCCCCCCCC
Q ss_conf --------------------------------53----347830246884268763-------03531000156786511
Q gi|254781019|r 149 --------------------------------GE----PTQGCGAVAILISSQTSI-------LEIEDITGIYTNDCMDF 185 (396)
Q Consensus 149 --------------------------------~~----~t~GaGA~Allv~~~~~~-------~~~~~~~~~~~~~~~df 185 (396)
.+ ..-.|||+|+++.+...- +.+. ..+..+ +.
T Consensus 168 k~r~nA~~NP~A~~r~~it~edvl~s~~Ia~PL~l~dc~~~sDGAaAvVl~s~e~Ar~l~~~pV~i~-g~g~~~----~~ 242 (384)
T PRK06158 168 AARQWAQLNPEAFMRDPLTIDDVLAARMVSDPLSVRDCCLVTDGAGAVVMVRADRARDLPRPPVYVL-GAAAAT----WH 242 (384)
T ss_pred HHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCHHHCCCCCCCCCEEEEEEECHHHHHHCCCCCEEEE-EEEEEC----CC
T ss_conf 9999870698631378879999721535456600114665666348999952888844799957999-999861----68
Q ss_pred CCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCCHHHHHHHHHHC
Q ss_conf 275887542356601698999999999999999629882110123311454057888886411
Q gi|254781019|r 186 WRPNYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHDFNDFQYFCYHQPFTRMAEKAHIRLS 248 (396)
Q Consensus 186 ~rp~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~~did~~v~H~p~~k~~~~~~~~l~ 248 (396)
...... + .. .......+.++..++.|++++|||.+-+|-+|.-+..-....+.
T Consensus 243 ~~~~~~--~----d~----~~~~~~~aa~~A~~~AGi~p~DiDvaev~D~Ft~~~l~~~E~lG 295 (384)
T PRK06158 243 RQISSM--P----DL----TVTAAAESGPRAFAMAGVTPADIDVVELYDAFTINTILFLEDLG 295 (384)
T ss_pred CCCCCC--C----CC----CHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCHHHHHHHHHHCC
T ss_conf 764335--5----21----02799999999999809997778788641776088999999849
No 39
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=99.32 E-value=2.1e-09 Score=77.52 Aligned_cols=98 Identities=16% Similarity=0.191 Sum_probs=84.8
Q ss_pred CCCCHHHHHHHHHHHHHHHC--CHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHH
Q ss_conf 98599999999999999727--9578689999457887546005888863202687735898414203588899878999
Q gi|254781019|r 47 PDEDIVTMAAAAALPIMQNQ--DKNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACAL 124 (396)
Q Consensus 47 ~~Ed~~tmA~~Aa~~~L~~~--~~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~ 124 (396)
.+..+.+|++.|++.+|+++ +|++||.|++++..+.......+-.+.-..|++.+++++-++++|.++..|+..|...
T Consensus 18 ~~~~~~~L~~~ai~~al~~agl~~~~Id~vi~G~~~~~g~g~n~aR~~al~aGlp~~vp~~tV~~aCaSG~~Ai~~A~~~ 97 (386)
T cd00751 18 KDVSADDLGAAVIKALLERAGLDPEEVDDVIMGNVLQAGEGQNPARQAALLAGLPESVPATTVNRVCGSGLQAVALAAQS 97 (386)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHH
T ss_conf 88989999999999999984989899998999950666656639999999769998886588842216879999999741
Q ss_pred HHCCCCCEEEEEECCCCCCC
Q ss_conf 97399976999503320145
Q gi|254781019|r 125 VAKSPERKVLIVASDVARYD 144 (396)
Q Consensus 125 i~sg~~~~aLVV~sD~~~~~ 144 (396)
|++|....+|+++.|.++..
T Consensus 98 I~sG~~dvvla~GvEsmS~~ 117 (386)
T cd00751 98 IAAGEADVVVAGGVESMSRA 117 (386)
T ss_pred HCCCCCCEEEEECCCCCCCC
T ss_conf 10799778887244535657
No 40
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=99.32 E-value=4.4e-09 Score=75.47 Aligned_cols=100 Identities=11% Similarity=0.026 Sum_probs=76.0
Q ss_pred EECCCCCCHHHHHHHHHHHHHHHCC--HHHCCEEEEECCCCCCCCH--HHHHHHHH-HHCCCCCCEEEEECCCHHHHHHH
Q ss_conf 6559985999999999999997279--5786899994578875460--05888863-20268773589841420358889
Q gi|254781019|r 43 SVLNPDEDIVTMAAAAALPIMQNQD--KNLIDTLFFATESSVDQSK--SAAIWLHK-LLGLNSSCRVVELKQACYSATCA 117 (396)
Q Consensus 43 ~v~~~~Ed~~tmA~~Aa~~~L~~~~--~~~Id~li~~T~t~~~~~~--~~a~~v~~-~Lgl~~~~~~~Di~~aC~g~~~A 117 (396)
+...++.+..+|+++|++++|++++ |+|||.++++...+..... .....+.. ..++ ..++.+-+..+|.++..|
T Consensus 18 ~~~~~~~~~~~L~~eA~~~Al~dAGl~~~dID~v~~G~~~~~~~~~~~~~g~~~~~~~~~~-~~~p~~~v~~~caSG~~A 96 (408)
T PRK06289 18 NWTKEGRDFADLTREVVDGTLAAAGIDADDIGVVHVGNFFGELFAGQGHLGAMPATVHPAL-WGTPASRHEAACASGSVA 96 (408)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCCHHHHHHHHHHCCC-CCCCCEEECCCCHHHHHH
T ss_conf 8887899999999999999999849998998999997415643445102566788764212-588614463523899999
Q ss_pred HHHHHHHHHCCCCCEEEEEECCCCCC
Q ss_conf 98789999739997699950332014
Q gi|254781019|r 118 LHMACALVAKSPERKVLIVASDVARY 143 (396)
Q Consensus 118 L~~A~~~i~sg~~~~aLVV~sD~~~~ 143 (396)
+..|...|++|....+|+++.|..+.
T Consensus 97 ~~~A~~~I~sG~~dvvla~G~e~ms~ 122 (408)
T PRK06289 97 TLAAIADLRSGAYDVALVVGLELEKT 122 (408)
T ss_pred HHHHHHHHHCCCCCEEEEEEEEECCC
T ss_conf 99999999748887799988886267
No 41
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=99.31 E-value=1.5e-08 Score=72.11 Aligned_cols=95 Identities=16% Similarity=0.188 Sum_probs=77.8
Q ss_pred CCCCCHHHHHHHHHHHHHHHCC--HHHCCEEEEECCCCCCC-CHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHH
Q ss_conf 9985999999999999997279--57868999945788754-60058888632026877358984142035888998789
Q gi|254781019|r 46 NPDEDIVTMAAAAALPIMQNQD--KNLIDTLFFATESSVDQ-SKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMAC 122 (396)
Q Consensus 46 ~~~Ed~~tmA~~Aa~~~L~~~~--~~~Id~li~~T~t~~~~-~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~ 122 (396)
.++.+...|+++|+++||++++ ++|||.+++++...... ......++.+.||+. ..+.+.+..+|..+..++..|.
T Consensus 20 ~~~~s~~~L~~eA~~~Al~DAGl~~~dID~~~~g~~~~~~~g~~~~~~~~~~~lG~~-~~p~~~v~~~~asg~~a~~~A~ 98 (391)
T PRK08313 20 RQDVSMAGLVREAIDRALADAGLTFDDIDAVVVGKAPDFFEGVMMPELFLADAIGAT-GKPLIRVHTAGSVGGSTAVVAA 98 (391)
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCCCCCCCCCCHHHHHHHHHCCC-CCCEEEEECCHHHHHHHHHHHH
T ss_conf 999799999999999999974999899899999765764555435578999970787-8843788253178999999999
Q ss_pred HHHHCCCCCEEEEEECCCC
Q ss_conf 9997399976999503320
Q gi|254781019|r 123 ALVAKSPERKVLIVASDVA 141 (396)
Q Consensus 123 ~~i~sg~~~~aLVV~sD~~ 141 (396)
..|++|..+.+||++.|..
T Consensus 99 ~aI~sG~~d~vlv~g~ek~ 117 (391)
T PRK08313 99 SLVQSGKYRRVLAVAWEKQ 117 (391)
T ss_pred HHHHCCCCCEEEEEEEECC
T ss_conf 9997488778999874035
No 42
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=99.31 E-value=7.6e-10 Score=80.20 Aligned_cols=96 Identities=20% Similarity=0.224 Sum_probs=80.5
Q ss_pred CCCCHHHHHHHHHHHHHHHCC--HHHCCEEEEECCCCCCC--CHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHH
Q ss_conf 985999999999999997279--57868999945788754--60058888632026877358984142035888998789
Q gi|254781019|r 47 PDEDIVTMAAAAALPIMQNQD--KNLIDTLFFATESSVDQ--SKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMAC 122 (396)
Q Consensus 47 ~~Ed~~tmA~~Aa~~~L~~~~--~~~Id~li~~T~t~~~~--~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~ 122 (396)
.+....+|+++|++.+|++++ |++||.+++++..+... ..-.+..+...+|++ +++++.++.+|.++..|+..|.
T Consensus 18 ~~~~~~dL~~~a~~~al~~agl~~~~ID~vi~G~~~~g~~~~~~~~a~~~a~~~Gl~-~~p~~~v~~~c~SG~~Ai~~Aa 96 (389)
T PRK06064 18 WDVSLRDLAVEAGLEALEDAGIDGKDIDAMYVGNMSGGRFVGQEHIAALIADYAGLA-PIPATRVEAACASGGAAVRQAY 96 (389)
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCHHHCCEEEEEECCCCCCCCCCCHHHHHHHHCCCC-CCCEEEEECCCHHHHHHHHHHH
T ss_conf 997999999999999999809498995999998127664343240999999975999-9866899375367999999999
Q ss_pred HHHHCCCCCEEEEEECCCCCC
Q ss_conf 999739997699950332014
Q gi|254781019|r 123 ALVAKSPERKVLIVASDVARY 143 (396)
Q Consensus 123 ~~i~sg~~~~aLVV~sD~~~~ 143 (396)
..|++|..+.+|+.+.|..+.
T Consensus 97 ~~I~sG~~dvvlagG~E~ms~ 117 (389)
T PRK06064 97 LAVASGEADVVLAAGVEKMTD 117 (389)
T ss_pred HHHHCCCCCEEEEECCCCCCC
T ss_conf 999739998999944223577
No 43
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=99.30 E-value=2.6e-09 Score=76.90 Aligned_cols=96 Identities=15% Similarity=0.164 Sum_probs=72.8
Q ss_pred CCCCHHHHHHHHHHHHHHHCC--HHHCCEEEEECCCCCCCC-HHHHHHHHH-HHCCCCCCEEEEECCCHHHHHHHHHHHH
Q ss_conf 985999999999999997279--578689999457887546-005888863-2026877358984142035888998789
Q gi|254781019|r 47 PDEDIVTMAAAAALPIMQNQD--KNLIDTLFFATESSVDQS-KSAAIWLHK-LLGLNSSCRVVELKQACYSATCALHMAC 122 (396)
Q Consensus 47 ~~Ed~~tmA~~Aa~~~L~~~~--~~~Id~li~~T~t~~~~~-~~~a~~v~~-~Lgl~~~~~~~Di~~aC~g~~~AL~~A~ 122 (396)
++.+..+|+++|++.+|++++ |++||.|++++...-... ...+..+.. ..++ ...+++-++.+|.++..|+..|.
T Consensus 18 ~~~s~~~L~~~A~~~Al~dAgl~~~dID~v~~G~~~~g~~~~~~~~~~~~~~~~~l-~~~p~~~v~~~caSG~~ai~~Aa 96 (389)
T PRK07516 18 DAETLESLIVRVAREALADAGIAAGDVDGIFLGHFNAGFSPQDFTASLVLQADPAL-RFKPATRVENACATGSAAVYAAI 96 (389)
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCHHHCCEEEEEECCCCCCCCHHHHHHHHHHCCCC-CCCCEEEECCCCHHHHHHHHHHH
T ss_conf 99899999999999999996909899399999824744464329999999736755-68755998787679999999999
Q ss_pred HHHHCCCCCEEEEEECCCCCC
Q ss_conf 999739997699950332014
Q gi|254781019|r 123 ALVAKSPERKVLIVASDVARY 143 (396)
Q Consensus 123 ~~i~sg~~~~aLVV~sD~~~~ 143 (396)
..|++|..+.+|+++.|.++.
T Consensus 97 ~~I~sG~~dvvl~~G~e~ms~ 117 (389)
T PRK07516 97 DAIESGRARIVLVVGAEKMTA 117 (389)
T ss_pred HHHHCCCCCEEEEEEECCCCC
T ss_conf 999759888999998710467
No 44
>PRK06065 acetyl-CoA acetyltransferase; Provisional
Probab=99.29 E-value=4.5e-09 Score=75.39 Aligned_cols=257 Identities=16% Similarity=0.069 Sum_probs=146.9
Q ss_pred HCCCCEEEECCCCCCHHHHHHHHHHHHHHHCC--HHHCCEEEEECCCCCCCC--HHHHHHHHHHHCCCCCCEEEEECCCH
Q ss_conf 03832466559985999999999999997279--578689999457887546--00588886320268773589841420
Q gi|254781019|r 36 GIGQERMSVLNPDEDIVTMAAAAALPIMQNQD--KNLIDTLFFATESSVDQS--KSAAIWLHKLLGLNSSCRVVELKQAC 111 (396)
Q Consensus 36 ~lGi~~r~v~~~~Ed~~tmA~~Aa~~~L~~~~--~~~Id~li~~T~t~~~~~--~~~a~~v~~~Lgl~~~~~~~Di~~aC 111 (396)
|.|+.... -.++++..+|+++|+++||++++ ++|||.+++++. +..+. .-...++.+.+|+. ..+...+..+|
T Consensus 16 G~G~T~f~-r~~~~s~~eL~~eA~~~Al~DAGl~~~dID~~~~g~~-~~~~~g~~~~~~~~~~~~g~~-~~p~~~v~~~~ 92 (393)
T PRK06065 16 GAGMTLFR-RRMLETPQELAWEAARQALDEAGLELKDIDCVVIGSA-PDAFDGVHMKGEYLAHGSGGI-RKPVSRVFVGG 92 (393)
T ss_pred EEEEECCC-CCCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEECC-CCCCCCCCCHHHHHHHHCCCC-CCCEEEEECCC
T ss_conf 86570126-7899999999999999999984999899899999556-765454320368999754777-88447874452
Q ss_pred HHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCC-----------CCCC---------------------------C---
Q ss_conf 3588899878999973999769995033201458-----------8875---------------------------3---
Q gi|254781019|r 112 YSATCALHMACALVAKSPERKVLIVASDVARYDL-----------GSSG---------------------------E--- 150 (396)
Q Consensus 112 ~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~~-----------~~~~---------------------------~--- 150 (396)
.++..++..|...|++|....+||++.|..+... +... |
T Consensus 93 asg~~a~~~A~~~I~sG~~d~vlvvg~ek~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~Al~a~rym~~yG~t~E~lA 172 (393)
T PRK06065 93 ATGVMVPIAGWYHVASGLCKKVLAVAEEKMSPARPHPQSVFRYIWDPILEKPLNPNLIWIFAMEMHRYMHVCGVKKEDIA 172 (393)
T ss_pred HHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHH
T ss_conf 78899999999998678776899987404688876631466630350113667886799999999999998499999999
Q ss_pred -----------------------------------C-------CCCCCEEEEEECCCCC-------CCEEEECCCCCCCC
Q ss_conf -----------------------------------3-------4783024688426876-------30353100015678
Q gi|254781019|r 151 -----------------------------------P-------TQGCGAVAILISSQTS-------ILEIEDITGIYTND 181 (396)
Q Consensus 151 -----------------------------------~-------t~GaGA~Allv~~~~~-------~~~~~~~~~~~~~~ 181 (396)
| .-.|||+|+++.++.. ...+.. .+... +
T Consensus 173 ~Vav~~r~~A~~NP~A~~r~~~t~edvl~S~~Ia~PL~l~Dc~~~sDGAaAvVl~s~e~A~~l~~~pv~I~g-~g~~~-~ 250 (393)
T PRK06065 173 LVSVKNKRNALNNPYAQLAANITVEDVLNSEVLVWPVQLLDVSPVSDGAAAMVLASEDVARRYTDTPVWVEG-VGWTL-D 250 (393)
T ss_pred HHHHHHHHHHHHCCHHHCCCCCCHHHHCCCCCCHHCCCHHHCCCCCCCEEEEEEECHHHHHHCCCCCEEEEE-EEEEC-C
T ss_conf 999999998744929664799996886047412213242531887882189999448999756899789999-99743-6
Q ss_pred CCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCH--HHCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHH
Q ss_conf 6511275887542356601698999999999999999629882--11012331145405788888641102454410013
Q gi|254781019|r 182 CMDFWRPNYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHDF--NDFQYFCYHQPFTRMAEKAHIRLSKIVHQNLSVAE 259 (396)
Q Consensus 182 ~~df~rp~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~--~did~~v~H~p~~k~~~~~~~~l~~~~~~~~~~~~ 259 (396)
.. .|.. .+. .+......+.+...++.|++. +|||.+-.|-+|.-+..-....+.... +......
T Consensus 251 ~~-~~~~--~d~----------~~~~~~~~aa~~Ay~~AGi~~p~~DiDv~evyD~Ft~~el~~lE~lGfc~-~Ge~~~~ 316 (393)
T PRK06065 251 NT-EWTN--RDL----------AYPRYVEFAARMAYKMAGIERPRKEIDVAEPYDPFDYKELHHIEGLMLAK-RGEAPKL 316 (393)
T ss_pred CC-CCCC--CCC----------CCCHHHHHHHHHHHHHCCCCCCHHCCCEEEEECCCCHHHHHHHHHCCCCC-CCCHHHH
T ss_conf 76-6454--553----------32179999999999976999972007379850675088999999849998-9837999
Q ss_pred HHH---------HHHHHHHHHHHCCCCCCCHHHHHHHHHHHH----C-CCCCCC-CEEEEEEECCCCC
Q ss_conf 455---------543334445323854323389999999971----5-743698-8899984079830
Q gi|254781019|r 260 IEK---------AIGITTLYNRLIGNSYTASLYIALISLLDH----S-SENLAG-KRVGFFSYGSGCV 312 (396)
Q Consensus 260 ~e~---------~~~~~~~~~~~~GN~~SASi~l~L~slLe~----~-~~~~~G-~rIll~syGsG~~ 312 (396)
+++ .++++-=.. -.||...++=...+.++..| + ++..++ .|++|..=..|+.
T Consensus 317 v~~G~~~~~G~lPvNtsGGll-s~Ghp~gatG~~~~~Ea~~QLrG~Ag~rQV~~~~~~gl~~~~Gg~~ 383 (393)
T PRK06065 317 LKEGVFDRDGDIPSSPSGGLL-GVGNPIAAAGLMKVISIYWQLKGTAGKMQVKKPVHTGVAQAWGDLM 383 (393)
T ss_pred HHCCCCCCCCCCCCCCCCCHH-CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCH
T ss_conf 977995679971353897100-2888561569999999999965776777479987789981667500
No 45
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=99.29 E-value=9.5e-10 Score=79.59 Aligned_cols=98 Identities=12% Similarity=0.098 Sum_probs=79.3
Q ss_pred CCCCHHHHHHHHHHHHHHHCC--HHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHH
Q ss_conf 985999999999999997279--578689999457887546005888863202687735898414203588899878999
Q gi|254781019|r 47 PDEDIVTMAAAAALPIMQNQD--KNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACAL 124 (396)
Q Consensus 47 ~~Ed~~tmA~~Aa~~~L~~~~--~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~ 124 (396)
.+..+.+|++.|++.+|++++ |++||.|+++...+.......+-...-..++...++++-++.+|.++..|+..|...
T Consensus 19 ~~~~a~eL~~~ai~~al~~agi~~~~Id~vi~G~~~~~g~g~n~ar~~~l~ag~~~~vp~~tV~~~CaSG~~Ai~~A~~~ 98 (393)
T cd00826 19 ANDLAHEAGAKAIAAALEPAGVAAGAVEEACLGQVLGAGEGQNCAQQAAMHAGGLQEAPAIGMNNLCGSGLRALALAMQL 98 (393)
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHH
T ss_conf 78999999999999999982969899898999925875555419999999759998997688768478999999999999
Q ss_pred HHCCCCCEEEEEECCCCCCC
Q ss_conf 97399976999503320145
Q gi|254781019|r 125 VAKSPERKVLIVASDVARYD 144 (396)
Q Consensus 125 i~sg~~~~aLVV~sD~~~~~ 144 (396)
|++|....+|+++.|.++..
T Consensus 99 I~sG~~dvvlagGvEsms~~ 118 (393)
T cd00826 99 IAGGDANCILAGGFEKMETS 118 (393)
T ss_pred HHCCCCCEEEEEEEEECCCC
T ss_conf 97699998999505506767
No 46
>PRK07800 consensus
Probab=99.28 E-value=7.8e-10 Score=80.14 Aligned_cols=99 Identities=11% Similarity=0.113 Sum_probs=85.0
Q ss_pred CCCCHHHHHHHHHHHHHHHCC--HHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHH
Q ss_conf 985999999999999997279--578689999457887546005888863202687735898414203588899878999
Q gi|254781019|r 47 PDEDIVTMAAAAALPIMQNQD--KNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACAL 124 (396)
Q Consensus 47 ~~Ed~~tmA~~Aa~~~L~~~~--~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~ 124 (396)
.+..+.+|++.+++.+|++.+ |++||.|+++.........-.+-.+.-..|++.+++++.++.+|.++..|+..|...
T Consensus 22 ~~~~~~~L~~~~i~~~l~~~gl~p~~Id~vi~G~v~~~g~g~n~aR~~~l~aglp~~vp~~tV~~~CaSGl~Ai~~A~~~ 101 (393)
T PRK07800 22 KDFSASDLGGIAIKAALEKAGVAADQVDYVIMGQVLQAGAGQIPARQAAVAAGIPMDVPALTINKVCLSGLDAIALADQL 101 (393)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHH
T ss_conf 99988999999999999974999899898999924766766509999999769898885699945013799999999999
Q ss_pred HHCCCCCEEEEEECCCCCCCC
Q ss_conf 973999769995033201458
Q gi|254781019|r 125 VAKSPERKVLIVASDVARYDL 145 (396)
Q Consensus 125 i~sg~~~~aLVV~sD~~~~~~ 145 (396)
|++|....+|+++.|..+..+
T Consensus 102 I~~G~~dvvlagGvEsmS~~P 122 (393)
T PRK07800 102 IRAGEFDVVVAGGQESMTQAP 122 (393)
T ss_pred HHCCCCCEEEEEEEECCCCCC
T ss_conf 867998667898520245475
No 47
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=99.27 E-value=5.1e-10 Score=81.31 Aligned_cols=98 Identities=9% Similarity=0.124 Sum_probs=84.2
Q ss_pred CCCCHHHHHHHHHHHHHHHCC--HHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHH
Q ss_conf 985999999999999997279--578689999457887546005888863202687735898414203588899878999
Q gi|254781019|r 47 PDEDIVTMAAAAALPIMQNQD--KNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACAL 124 (396)
Q Consensus 47 ~~Ed~~tmA~~Aa~~~L~~~~--~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~ 124 (396)
.+..+.+|++.+++.+|++.+ |++||.+++++........-.+-.+....|++..++++.++.+|.+++.|+.+|...
T Consensus 22 ~~~~~~dL~~~a~~~~l~r~~l~~~~Id~vi~G~~~~~g~g~~~aR~~~l~aGlp~~vp~~tV~~~CaSGl~Ai~~A~~~ 101 (393)
T PRK08235 22 KDVKATELGGIAIKEALERANVSAEDVEEVIMGTVLQGGQGQIPSRQAARAAGIPWEVQTETINKVCASGLRAVTLADQI 101 (393)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHH
T ss_conf 89989999999999999873989899998999935733545519999999769998886078825440547999999999
Q ss_pred HHCCCCCEEEEEECCCCCCC
Q ss_conf 97399976999503320145
Q gi|254781019|r 125 VAKSPERKVLIVASDVARYD 144 (396)
Q Consensus 125 i~sg~~~~aLVV~sD~~~~~ 144 (396)
|++|....+|+++.|.++..
T Consensus 102 I~sG~~dv~lagGvEsmS~~ 121 (393)
T PRK08235 102 IRAGDASVIVAGGMESMSNA 121 (393)
T ss_pred HHCCCCCEEEEEEEEECCCC
T ss_conf 85898746688604654567
No 48
>PRK08371 consensus
Probab=99.26 E-value=1.6e-09 Score=78.22 Aligned_cols=96 Identities=20% Similarity=0.272 Sum_probs=80.9
Q ss_pred CCCCHHHHHHHHHHHHHHHCCHHHCCEEEEECCCCCC--CCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHH
Q ss_conf 9859999999999999972795786899994578875--46005888863202687735898414203588899878999
Q gi|254781019|r 47 PDEDIVTMAAAAALPIMQNQDKNLIDTLFFATESSVD--QSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACAL 124 (396)
Q Consensus 47 ~~Ed~~tmA~~Aa~~~L~~~~~~~Id~li~~T~t~~~--~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~ 124 (396)
++.+..+|+++|++++|+++++++||-++++...... .....+..+...+|++ .+++.-++.+|.++..|+..|...
T Consensus 18 ~~~~~~~L~~ea~~~Al~dAgi~~iD~v~~g~~~~~~~~~~~~~~~~~a~~~Gl~-~vp~~~v~~~caSg~~Ai~~Aa~~ 96 (388)
T PRK08371 18 WRTSLRDLAVEAILKAMDDAGIDKVDSLYVGNMASGSFIEQENLGALIADWAGLG-NIPAVKVEAACASGGAAVQEGAKA 96 (388)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHEEEEECCCCCCCCCHHHHHHHHHHHCCCC-CCCEEEECCCCHHHHHHHHHHHHH
T ss_conf 9989899999999999998099833348991356542221323999999975999-986246667357899999999999
Q ss_pred HHCCCCCEEEEEECCCCCC
Q ss_conf 9739997699950332014
Q gi|254781019|r 125 VAKSPERKVLIVASDVARY 143 (396)
Q Consensus 125 i~sg~~~~aLVV~sD~~~~ 143 (396)
|++|....+|+++.|..+.
T Consensus 97 I~sG~~d~vla~G~e~ms~ 115 (388)
T PRK08371 97 VLSGLEDVVLVVGVEKMTD 115 (388)
T ss_pred HHCCCCCEEEEEEEEECCC
T ss_conf 9828898899986753467
No 49
>pfam02797 Chal_sti_synt_C Chalcone and stilbene synthases, C-terminal domain. This domain of chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in the N-terminal domain.
Probab=99.23 E-value=6.7e-11 Score=86.76 Aligned_cols=116 Identities=13% Similarity=0.109 Sum_probs=88.1
Q ss_pred CCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 54235660169899999999999999962988211012331145405788888641102454410013455543334445
Q gi|254781019|r 192 RTALVDGKYSTKIYLQSLEAVWHDYQKNKGHDFNDFQYFCYHQPFTRMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYN 271 (396)
Q Consensus 192 ~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~~did~~v~H~p~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~ 271 (396)
.+..+-.+.+....-+.+...+..++++.|++..|+.+|++|+.++|+++.....+... ++++..+....
T Consensus 25 Gf~~~Ls~~VP~~i~~~l~~~v~~~L~~~gl~~~d~~~wa~HPGG~~Ilda~~~~L~L~----------~~~l~~Sr~vL 94 (151)
T pfam02797 25 GLTFHLLKDVPQLISKNIEKCLVEAFDPLGISDWNSIFWIAHPGGPAILDQVEAKLGLK----------PEKLRASRHVL 94 (151)
T ss_pred CEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHCCCC----------HHHHHHHHHHH
T ss_conf 88999882636999998999999999874998332452788799789999999981999----------89999999999
Q ss_pred HHCCCCCCCHHHHHHHHHHHHC---CCCCCC---CEEEEEEECCCCCEEEEE
Q ss_conf 3238543233899999999715---743698---889998407983037787
Q gi|254781019|r 272 RLIGNSYTASLYIALISLLDHS---SENLAG---KRVGFFSYGSGCVAEFFS 317 (396)
Q Consensus 272 ~~~GN~~SASi~l~L~slLe~~---~~~~~G---~rIll~syGsG~~a~~f~ 317 (396)
+++|||+|+|+++.|..++++. +...+| +..++++||.|+++|+.-
T Consensus 95 ~~~GNmSS~tVlfVLe~~~~~~~~~~~~~~g~~~e~gl~~AfGPG~t~E~~L 146 (151)
T pfam02797 95 SEYGNMSSACVLFILDEMRKKSLKKGKSTTGEGLEWGVLFGFGPGLTVETVV 146 (151)
T ss_pred HHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCHHHHHHH
T ss_conf 9758618999999999999766444788888886568999968829999999
No 50
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=99.21 E-value=7.2e-09 Score=74.13 Aligned_cols=266 Identities=18% Similarity=0.143 Sum_probs=145.0
Q ss_pred CCCEEEEEEEECCCEEECHHHHHHHC--CC---------CHHHHHHHCC-C-CE---EEECCCCC----C-HHHHHHHHH
Q ss_conf 96206688873489045599999870--99---------9879763038-3-24---66559985----9-999999999
Q gi|254781019|r 1 MAIGIEDISFYTTNQYLDLSVIAEKY--RL---------DVAKFYVGIG-Q-ER---MSVLNPDE----D-IVTMAAAAA 59 (396)
Q Consensus 1 M~vGI~~i~~y~P~~~v~~~~l~~~~--g~---------~~~k~~~~lG-i-~~---r~v~~~~E----d-~~tmA~~Aa 59 (396)
++|-|.+++..+|.- -+.+++-+.. |. +.+++...++ . .. .....+.| | ..-|+++++
T Consensus 1 ~rIaItG~g~~~P~g-~~~~~fw~~L~~g~s~i~~~~~~~~~~~~~~~~g~i~~~~~~~~i~~~~~~~~dp~~rl~l~aa 79 (406)
T cd00834 1 RRVVITGLGAVTPLG-NGVEEFWEALLAGRSGIRPITRFDASGFPSRIAGEVPDFDPEDYLDRKELRRMDRFAQFALAAA 79 (406)
T ss_pred CEEEEEECEEECCCC-CCHHHHHHHHHCCCCEEECCCCCCCCCCCCCEEEECCCCCHHHCCCHHHHHHCCHHHHHHHHHH
T ss_conf 909999577889797-9999999999749987744883334258885536658888011589999985599999999999
Q ss_pred HHHHHHCC--HHHCC----EEEEECCCCC---------------------C-----CCHHHHHHHHHHHCCCCCCEEEEE
Q ss_conf 99997279--57868----9999457887---------------------5-----460058888632026877358984
Q gi|254781019|r 60 LPIMQNQD--KNLID----TLFFATESSV---------------------D-----QSKSAAIWLHKLLGLNSSCRVVEL 107 (396)
Q Consensus 60 ~~~L~~~~--~~~Id----~li~~T~t~~---------------------~-----~~~~~a~~v~~~Lgl~~~~~~~Di 107 (396)
.++|++++ +++++ .|+++|..+. + .....+..|...|++... ++-+
T Consensus 80 ~~Al~dAgl~~~~~~~~~~gV~vGs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~Gp--~~tv 157 (406)
T cd00834 80 EEALADAGLDPEELDPERIGVVIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNMAAGQVAIRLGLRGP--NYTV 157 (406)
T ss_pred HHHHHHCCCCHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCHHHHHHHHHHCCCCC--CEEE
T ss_conf 99999759982344866447999437773777999999998558665681121011312899999998499997--4203
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC-----------C----CCC---CC--------CCCCCCEEEEE
Q ss_conf 1420358889987899997399976999503320145-----------8----887---53--------34783024688
Q gi|254781019|r 108 KQACYSATCALHMACALVAKSPERKVLIVASDVARYD-----------L----GSS---GE--------PTQGCGAVAIL 161 (396)
Q Consensus 108 ~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~-----------~----~~~---~~--------~t~GaGA~All 161 (396)
..+|++++.||..|..+|++|....+||.++|..... + ..+ .+ +..|.|+++++
T Consensus 158 ~taCsSsl~Al~~A~~~L~~G~~d~aivgg~~~~~~~~~~~~f~~~~~Ls~~~~~p~~~~rpFD~~adG~v~gEGa~~~v 237 (406)
T cd00834 158 STACASGAHAIGDAARLIRLGRADVVIAGGAEALITPLTLAGFAALRALSTRNDDPEKASRPFDKDRDGFVLGEGAGVLV 237 (406)
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCCHHHHEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCEEEEE
T ss_conf 34416767889999999977954202110024127868999999888873389987666565556788400128655885
Q ss_pred ECCCC-------CCCEEEECCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECC
Q ss_conf 42687-------63035310001567865112758875423566016989999999999999996298821101233114
Q gi|254781019|r 162 ISSQT-------SILEIEDITGIYTNDCMDFWRPNYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHDFNDFQYFCYHQ 234 (396)
Q Consensus 162 v~~~~-------~~~~~~~~~~~~~~~~~df~rp~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~~did~~v~H~ 234 (396)
+.+.. .+.......+.. . |-++.. . +.-++ .....++++.+++.|++++||+|+..|-
T Consensus 238 L~~~~~A~~~g~~i~a~I~g~~~~-~---dg~~~~-~--~~p~~--------~~~~~~i~~al~~agi~~~~I~yIe~Hg 302 (406)
T cd00834 238 LESLEHAKARGAKIYAEILGYGAS-S---DAYHIT-A--PDPDG--------EGAARAMRAALADAGLSPEDIDYINAHG 302 (406)
T ss_pred CCCHHHHHHCCCCEEEEEEEEEEE-C---CCCCCC-C--CCCCH--------HHHHHHHHHHHHHHCCCCCCCCEEEEEC
T ss_conf 145999986799168999889993-7---998888-8--89898--------9999999999998589974452899704
Q ss_pred CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
Q ss_conf 54057888886411024544100134555433344453238543233899999999
Q gi|254781019|r 235 PFTRMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALISLL 290 (396)
Q Consensus 235 p~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~slL 290 (396)
.+.++.+.....-......+. ...+ +....-..+||+-.||=.+.|...+
T Consensus 303 tGt~~gD~~E~~ai~~~f~~~-----~~~~-~i~s~K~~iGH~~~asG~~~li~~~ 352 (406)
T cd00834 303 TSTPLNDAAESKAIKRVFGEH-----AKKV-PVSSTKSMTGHLLGAAGAVEAIATL 352 (406)
T ss_pred CCCCCCCHHHHHHHHHHHCCC-----CCCC-EEECCHHHHCCCHHHHHHHHHHHHH
T ss_conf 878677999999999985567-----8986-6888211001188999999999999
No 51
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=99.17 E-value=6.9e-09 Score=74.24 Aligned_cols=100 Identities=17% Similarity=0.108 Sum_probs=84.6
Q ss_pred CCCCCHHHHHHHHHHHHHHHC--CHHHCCEEEEECCCCCC-CCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHH
Q ss_conf 998599999999999999727--95786899994578875-460058888632026877358984142035888998789
Q gi|254781019|r 46 NPDEDIVTMAAAAALPIMQNQ--DKNLIDTLFFATESSVD-QSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMAC 122 (396)
Q Consensus 46 ~~~Ed~~tmA~~Aa~~~L~~~--~~~~Id~li~~T~t~~~-~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~ 122 (396)
-.+..+.+|+..|++.+|++. +|++||.+|++..+... ...-.+-.+.-..|++..++++.++.+|.+++.|+..|.
T Consensus 21 l~~~~~~~L~~~a~~~~l~r~~v~~~~Id~vi~G~v~~~g~~~~n~aR~~~l~aglp~~vpa~tvn~~C~SGl~Ai~~A~ 100 (390)
T PRK06504 21 LAGWHPADLAAQVLDALVDRSGADPAQIEDVIMGCVSQAGEQAMNVARNAVLASKLPESVPGTSIDRQCGSSQQALHFAA 100 (390)
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHH
T ss_conf 89998999999999999988098989989899991787453324099999997799976754777346785899999999
Q ss_pred HHHHCCCCCEEEEEECCCCCCCC
Q ss_conf 99973999769995033201458
Q gi|254781019|r 123 ALVAKSPERKVLIVASDVARYDL 145 (396)
Q Consensus 123 ~~i~sg~~~~aLVV~sD~~~~~~ 145 (396)
..|++|....+|+.+.|.++..+
T Consensus 101 ~~I~sG~~dv~lagGvEsmS~~P 123 (390)
T PRK06504 101 QAVMSGTMDVVIAAGVESMTRVP 123 (390)
T ss_pred HHHHCCCCCEEEECCEEECCCCC
T ss_conf 99847996777315621036898
No 52
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=99.15 E-value=4.5e-09 Score=75.40 Aligned_cols=99 Identities=13% Similarity=0.136 Sum_probs=83.4
Q ss_pred CCCCHHHHHHHHHHHHHHHC--CHHHCCEEEEECCCCC-CCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHH
Q ss_conf 98599999999999999727--9578689999457887-54600588886320268773589841420358889987899
Q gi|254781019|r 47 PDEDIVTMAAAAALPIMQNQ--DKNLIDTLFFATESSV-DQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACA 123 (396)
Q Consensus 47 ~~Ed~~tmA~~Aa~~~L~~~--~~~~Id~li~~T~t~~-~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~ 123 (396)
.+..+.+|++.|.+.+|++. +|++||.++++..... ......+-.+.-..|++..++++.++.+|.+++.|+..|..
T Consensus 22 ~~~~~~~L~a~ai~~~l~r~~i~p~~Id~vi~G~v~~~g~~~~n~aR~~~L~aGlp~~vpa~tVn~~CaSGl~Av~~A~~ 101 (382)
T PRK07801 22 AGVHPADLGAHVLRGLVDRNDIDPAAVDDVIFGCVDAIGPQAGNIARTSWLAAGYPEEVPGVTVDRQCGSSQQAIHFAAQ 101 (382)
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCHHHCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHH
T ss_conf 99999999999999999980979899898999716665665567999999976999888648884121589999999998
Q ss_pred HHHCCCCCEEEEEECCCCCCCC
Q ss_conf 9973999769995033201458
Q gi|254781019|r 124 LVAKSPERKVLIVASDVARYDL 145 (396)
Q Consensus 124 ~i~sg~~~~aLVV~sD~~~~~~ 145 (396)
.|++|....+|+++.|.++..+
T Consensus 102 ~I~~G~~dv~lagGvEsMS~~P 123 (382)
T PRK07801 102 AIMSGTADVIVAGGVQNMSQIP 123 (382)
T ss_pred HHCCCCCCEEEECCEEECCCCC
T ss_conf 8628996746651543225576
No 53
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.15 E-value=2.6e-08 Score=70.67 Aligned_cols=261 Identities=14% Similarity=0.085 Sum_probs=143.8
Q ss_pred CCEEEEEEEECCCEEECHHHHHHHC--CC---------CHHHHHHHCCCCEEEECCCC--C----------CH-HHHHHH
Q ss_conf 6206688873489045599999870--99---------98797630383246655998--5----------99-999999
Q gi|254781019|r 2 AIGIEDISFYTTNQYLDLSVIAEKY--RL---------DVAKFYVGIGQERMSVLNPD--E----------DI-VTMAAA 57 (396)
Q Consensus 2 ~vGI~~i~~y~P~~~v~~~~l~~~~--g~---------~~~k~~~~lGi~~r~v~~~~--E----------d~-~tmA~~ 57 (396)
.|-|.++|.-+|.-. +.+++-+.. |. +...+....+ -.+.+.+ + |. .-|++.
T Consensus 3 RVvItG~g~v~P~g~-~~e~fw~~L~~G~s~i~~~~~~d~~~~~~~~~---g~i~~f~~~~~i~~~~~r~~d~~~~~~l~ 78 (411)
T PRK07314 3 RVVVTGLGAVSPLGN-DVESTWKNLLAGKSGIGPITKFDTSDLAVKIA---GEVKDFNPDDYMSRKEARRMDRFIQYGIA 78 (411)
T ss_pred CEEEECCEEECCCCC-CHHHHHHHHHCCCCEEEECCCCCCCCCCCCEE---EECCCCCHHHCCCHHHHHHCCHHHHHHHH
T ss_conf 699981678898989-99999999980998365478666546876366---78189895775899999855999999999
Q ss_pred HHHHHHHHCC--HHHCC----EEEEECCCCC---------------------CCC-----HHHHHHHHHHHCCCCCCEEE
Q ss_conf 9999997279--57868----9999457887---------------------546-----00588886320268773589
Q gi|254781019|r 58 AALPIMQNQD--KNLID----TLFFATESSV---------------------DQS-----KSAAIWLHKLLGLNSSCRVV 105 (396)
Q Consensus 58 Aa~~~L~~~~--~~~Id----~li~~T~t~~---------------------~~~-----~~~a~~v~~~Lgl~~~~~~~ 105 (396)
++.+||++++ +++++ .|+++|..+. ... -..+.+|...+++... ++
T Consensus 79 aa~~Al~dAGl~~~~~~~~r~gv~vGt~~g~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~a~~is~~~~l~Gp--~~ 156 (411)
T PRK07314 79 AAKQAVEDAGLEITEENADRIGVIIGSGIGGLETIEEQHITLHEKGPRRVSPFFVPMAIINMAAGHVSIRYGAKGP--NH 156 (411)
T ss_pred HHHHHHHHCCCCHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC--CC
T ss_conf 9999999739994680865568998147762576999999998449554585202566502899999998399997--31
Q ss_pred EECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC------------------CCCCCC--------CCCCCCEEE
Q ss_conf 841420358889987899997399976999503320145------------------888753--------347830246
Q gi|254781019|r 106 ELKQACYSATCALHMACALVAKSPERKVLIVASDVARYD------------------LGSSGE--------PTQGCGAVA 159 (396)
Q Consensus 106 Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~------------------~~~~~~--------~t~GaGA~A 159 (396)
-+..+|++++.||..|..+|++|....+||.++|..... +....+ +..|.||++
T Consensus 157 tv~~aCsSsl~Al~~A~~~i~~G~~d~aivgg~~~~~~~~~~~~f~~~~~ls~~~~~p~~~~rPFD~~adG~v~gEGa~~ 236 (411)
T PRK07314 157 SIVTACATGAHAIGDAARLIQYGDADVMVAGGAEAAITPLGIAGFAAARALSTRNDDPERASRPFDKDRDGFVMGEGAGI 236 (411)
T ss_pred CCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEE
T ss_conf 11140137999999999999859977654145245678899999999888740789987777732137997322561478
Q ss_pred EEECCC-------CCCCEEEECCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEE
Q ss_conf 884268-------7630353100015678651127588754235660169899999999999999962988211012331
Q gi|254781019|r 160 ILISSQ-------TSILEIEDITGIYTNDCMDFWRPNYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHDFNDFQYFCY 232 (396)
Q Consensus 160 llv~~~-------~~~~~~~~~~~~~~~~~~df~rp~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~~did~~v~ 232 (396)
+++.+. .++......++.. .|-++.. .+.+... ....++++.+++.|++++||+|+..
T Consensus 237 vvLe~~~~A~~~g~~i~a~i~G~~~~----~d~~~~~-~p~~~~~----------g~~~a~~~al~~agi~~~~i~yIe~ 301 (411)
T PRK07314 237 LVLEELEHAKARGAKIYAEVVGYGMT----GDAYHMT-APAPDGE----------GAARAMVAALKDAGINPEDIDYINA 301 (411)
T ss_pred EEECCHHHHHHCCCCEEEEEEEEEEC----CCCCCCC-CCCCCCH----------HHHHHHHHHHHHHCCCCCCEEEEEE
T ss_conf 85265999987799468998313764----7998887-8898605----------6788999999985899633217997
Q ss_pred CCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
Q ss_conf 145405788888641102454410013455543334445323854323389999999
Q gi|254781019|r 233 HQPFTRMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALISL 289 (396)
Q Consensus 233 H~p~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~sl 289 (396)
|-.+.++.+....+.....-.+.. ..+ +....=..+|++.+||=.+.|...
T Consensus 302 hgtgt~~~D~~E~~al~~~f~~~~-----~~~-~i~S~K~~~GH~~~AsG~~~li~~ 352 (411)
T PRK07314 302 HGTSTPAGDKAETQAIKRVFGEHA-----YKV-AVSSTKSMTGHLLGAAGAVEAIFT 352 (411)
T ss_pred ECCCCCCCCHHHHHHHHHHHCCCC-----CCC-CCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 368787779889999999865558-----898-764803310336888999999999
No 54
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=99.13 E-value=3.3e-08 Score=69.99 Aligned_cols=99 Identities=18% Similarity=0.153 Sum_probs=83.0
Q ss_pred CCCCHHHHHHHHHHHHHHHC--CHHHCCEEEEECCCCCC-CCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHH
Q ss_conf 98599999999999999727--95786899994578875-4600588886320268773589841420358889987899
Q gi|254781019|r 47 PDEDIVTMAAAAALPIMQNQ--DKNLIDTLFFATESSVD-QSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACA 123 (396)
Q Consensus 47 ~~Ed~~tmA~~Aa~~~L~~~--~~~~Id~li~~T~t~~~-~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~ 123 (396)
.+-.+.+|++.+.+.+|++. +|++||-||++...+.. ...-.+-++.-.-|++..++++-++..|.+++.|+..|..
T Consensus 24 ~~~~~~~L~a~~i~~~l~r~~i~~~~Id~vi~G~v~~~g~~g~n~aR~~al~aGlp~~vpa~TVnr~C~SGl~Ai~~Aa~ 103 (402)
T PRK08242 24 HEVKPVRLAAGLLNALRDRNGLDTAAVDDVVLGCVTPVGDQGADIARTAVLAAGLPETVPGVQINRFCASGLEAVNLAAA 103 (402)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHH
T ss_conf 98989999999999999870989899997999807765544577999999976999888647884505578999999999
Q ss_pred HHHCCCCCEEEEEECCCCCCCC
Q ss_conf 9973999769995033201458
Q gi|254781019|r 124 LVAKSPERKVLIVASDVARYDL 145 (396)
Q Consensus 124 ~i~sg~~~~aLVV~sD~~~~~~ 145 (396)
.|++|....+|+.+.|.++..+
T Consensus 104 ~I~~G~~dv~iAGGvEsmS~~P 125 (402)
T PRK08242 104 KVRSGWDDLVIAGGVESMSRVP 125 (402)
T ss_pred HHHCCCCCEEEECCCCCCCCCC
T ss_conf 9966998889976613456575
No 55
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.13 E-value=1.8e-07 Score=65.45 Aligned_cols=255 Identities=15% Similarity=0.162 Sum_probs=146.5
Q ss_pred CCCEEEEEEEECCCEEECHHHHHHHCCCCHHHHHHHCCCCEEE-E-----------CCCCCCHHHHHHHHHHHHHHHCCH
Q ss_conf 9620668887348904559999987099987976303832466-5-----------599859999999999999972795
Q gi|254781019|r 1 MAIGIEDISFYTTNQYLDLSVIAEKYRLDVAKFYVGIGQERMS-V-----------LNPDEDIVTMAAAAALPIMQNQDK 68 (396)
Q Consensus 1 M~vGI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~~lGi~~r~-v-----------~~~~Ed~~tmA~~Aa~~~L~~~~~ 68 (396)
|.|-|++||.--|-= +.++.-+. +-.+ ..||.... + .......-.+...|+..+|++++.
T Consensus 2 ~RVVITGiG~vSplG--~~~e~w~~--L~~G----~sgI~~~~~f~~~~~~~~~~~~~~~~~~~~l~~~a~~~Al~dAgl 73 (379)
T PRK05952 2 MKVVVTGIGLVSALG--SLEQSWQR--LLQG----KSGIKLHQPFPELPPLPLGLIGSQPISLEDLTQTTVTAALKDAGL 73 (379)
T ss_pred CEEEEECCEEECCCC--CHHHHHHH--HHCC----CCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
T ss_conf 879994511068888--85999999--9768----988256777777776142002778568999999999999997799
Q ss_pred ----HHCCEEEEECCCCCCC--------------------------CH-HHHHHHHHHHCCCCCCEEEEECCCHHHHHHH
Q ss_conf ----7868999945788754--------------------------60-0588886320268773589841420358889
Q gi|254781019|r 69 ----NLIDTLFFATESSVDQ--------------------------SK-SAAIWLHKLLGLNSSCRVVELKQACYSATCA 117 (396)
Q Consensus 69 ----~~Id~li~~T~t~~~~--------------------------~~-~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~A 117 (396)
.++ .++++|..+... .| ..+..+...+|+.. +++-+..+|++++.|
T Consensus 74 ~~~~~~~-gv~~Gt~~g~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~ia~~~g~~G--~~~~~~~aCaS~~~A 150 (379)
T PRK05952 74 TPPLTDC-GVVIGSSRGFQGQWEKLARQIYVGDQSGDEAEENWLDTLPHQAAIATARQIGAQG--PVLAPMAACATGIWA 150 (379)
T ss_pred CCCCCCE-EEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC--CEECCCCHHHHHHHH
T ss_conf 9975465-8999967526768999998752047888667216999853399999999839999--620401274789999
Q ss_pred HHHHHHHHHCCCCCEEEEEECCCCCCCC------------CCC--------CCCCCCCCEEEEEECCC-------CCCCE
Q ss_conf 9878999973999769995033201458------------887--------53347830246884268-------76303
Q gi|254781019|r 118 LHMACALVAKSPERKVLIVASDVARYDL------------GSS--------GEPTQGCGAVAILISSQ-------TSILE 170 (396)
Q Consensus 118 L~~A~~~i~sg~~~~aLVV~sD~~~~~~------------~~~--------~~~t~GaGA~Allv~~~-------~~~~~ 170 (396)
|..|..+|++|....++|.++|...... .+. +=+..|-||+++++++. .++..
T Consensus 151 i~~A~~~I~~G~~d~~i~gg~~~~~~~~~~~~f~~~~~ls~~~~rPFd~~r~G~v~gEGa~~lvLE~~~~A~~rga~iya 230 (379)
T PRK05952 151 IAQGAELIQTGQCQRVIAGAVESPITPLTLAGFQKMGALAKTGAYPFDRQREGLVLGEGGAILVLESEELAQKRGAKIYG 230 (379)
T ss_pred HHHHHHHHHCCCCCEEEEEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCEEEEECCHHHHHHCCCCEEE
T ss_conf 99999999839988798678765248276899986578344676745468996025875046764559999878995689
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCCHHHHHHHHHHCCH
Q ss_conf 53100015678651127588754235660169899999999999999962988211012331145405788888641102
Q gi|254781019|r 171 IEDITGIYTNDCMDFWRPNYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHDFNDFQYFCYHQPFTRMAEKAHIRLSKI 250 (396)
Q Consensus 171 ~~~~~~~~~~~~~df~rp~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~~did~~v~H~p~~k~~~~~~~~l~~~ 250 (396)
.....+. +.|.+....|.. +| .....+++..+++.+++++||||+..|-+..+..+....+..+.
T Consensus 231 ~i~g~~~-~~d~~~~~~~~~------~g--------~~~~~am~~al~~agi~~~~Idyi~aHgtgT~~~D~~E~~ai~~ 295 (379)
T PRK05952 231 QILGFGL-TCDAYHMSAPEP------SG--------KSAILAIQQCLARSGLTPEDIDYIHAHGTATRLNDQREANLIQT 295 (379)
T ss_pred EEECCEE-CCCCCCCCCCCC------CH--------HHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHHH
T ss_conf 9935255-368988878898------98--------99999999999984998333528994678787769999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
Q ss_conf 4544100134555433344453238543233899999999
Q gi|254781019|r 251 VHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALISLL 290 (396)
Q Consensus 251 ~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~slL 290 (396)
.. ..++ +....-..+|++..||=.+.+...+
T Consensus 296 vf--------g~~~-~v~s~Ks~~GH~~~aaG~~e~~~~~ 326 (379)
T PRK05952 296 LF--------PHRV-AVSSTKGATGHTLGASGALGVAFSL 326 (379)
T ss_pred HH--------CCCC-CCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 71--------8778-8778743324532777999999999
No 56
>PRK08041 consensus
Probab=99.10 E-value=1.9e-08 Score=71.55 Aligned_cols=99 Identities=13% Similarity=0.156 Sum_probs=83.5
Q ss_pred CCCCHHHHHHHHHHHHHHHC--CHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHH
Q ss_conf 98599999999999999727--9578689999457887546005888863202687735898414203588899878999
Q gi|254781019|r 47 PDEDIVTMAAAAALPIMQNQ--DKNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACAL 124 (396)
Q Consensus 47 ~~Ed~~tmA~~Aa~~~L~~~--~~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~ 124 (396)
.+..+.+|+..+.+.+|++. +|++||-++++.........-.+-.+.-..|++..++++-++..|.++..|+.+|...
T Consensus 22 ~~~~~~~L~a~~ik~~l~r~gi~~~~ID~vi~G~v~~~g~g~n~aR~~al~aGlp~~vpa~tVnr~C~SGl~Ai~~Aa~~ 101 (391)
T PRK08041 22 ARHSAVELGSLVVKALIERTGVPAYAVDEVILGQVLTAGAGQNPARQSAIKGGLPNSVSAITINDVCGSGLKALHLATQA 101 (391)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHH
T ss_conf 89999999999999999981989899898999805765656659999999769998887178751656878999999999
Q ss_pred HHCCCCCEEEEEECCCCCCCC
Q ss_conf 973999769995033201458
Q gi|254781019|r 125 VAKSPERKVLIVASDVARYDL 145 (396)
Q Consensus 125 i~sg~~~~aLVV~sD~~~~~~ 145 (396)
|++|....+|+.+.|.++..+
T Consensus 102 I~~G~~dvvlagGvEsmS~~P 122 (391)
T PRK08041 102 IQCGEADIVIAGGQENMSRAP 122 (391)
T ss_pred HHCCCCCEEEEEEEECCCCCC
T ss_conf 867997667774122146584
No 57
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=99.10 E-value=1.3e-08 Score=72.49 Aligned_cols=98 Identities=17% Similarity=0.159 Sum_probs=75.3
Q ss_pred HCCCCEEEECCCCCCHHHHHHHHHHHHHHHCC--HHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHH
Q ss_conf 03832466559985999999999999997279--5786899994578875460058888632026877358984142035
Q gi|254781019|r 36 GIGQERMSVLNPDEDIVTMAAAAALPIMQNQD--KNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYS 113 (396)
Q Consensus 36 ~lGi~~r~v~~~~Ed~~tmA~~Aa~~~L~~~~--~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g 113 (396)
|+|+.... -.++.+...|+++|+++||++++ ++|||.+++++..+. . ....+.+.||+.. .....+..+|.+
T Consensus 11 G~G~tp~~-r~~~~t~~~La~eA~~~AL~DAGl~~~DIDg~~~~~~~~~-~---~~~~~~~~lGi~~-~~~~~~~~gGas 84 (388)
T PRK08142 11 GAYEHPTR-KAPDKSVAQLHAEVAKGALADAGLTLADVDGYFCAGDAPG-L---GPASMVDYLGLKV-RHVDSTETGGSS 84 (388)
T ss_pred EEEECCCC-CCCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCCC-C---CHHHHHHHCCCCC-EEECCCCCCCHH
T ss_conf 54345662-3899899999999999999975999899999987678887-4---1899999709985-764475463579
Q ss_pred HHHHHHHHHHHHHCCCCCEEEEEECC
Q ss_conf 88899878999973999769995033
Q gi|254781019|r 114 ATCALHMACALVAKSPERKVLIVASD 139 (396)
Q Consensus 114 ~~~AL~~A~~~i~sg~~~~aLVV~sD 139 (396)
+..++..|...|++|....+||+.++
T Consensus 85 ~~~~~~~A~~aIasG~~d~vlv~~a~ 110 (388)
T PRK08142 85 YLAHVGHAAQAIAAGKCSVALITLAG 110 (388)
T ss_pred HHHHHHHHHHHHHHCCCCEEEEEEEC
T ss_conf 99999999999984887789999812
No 58
>pfam08545 ACP_syn_III 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III. This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EC:2.3.1.41, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria.
Probab=99.09 E-value=2.1e-10 Score=83.64 Aligned_cols=63 Identities=24% Similarity=0.346 Sum_probs=54.9
Q ss_pred EEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCC---CCCCCCEEEEEECCCCC
Q ss_conf 9841420358889987899997399976999503320145888753---34783024688426876
Q gi|254781019|r 105 VELKQACYSATCALHMACALVAKSPERKVLIVASDVARYDLGSSGE---PTQGCGAVAILISSQTS 167 (396)
Q Consensus 105 ~Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~~~~~~~---~t~GaGA~Allv~~~~~ 167 (396)
||++++|+|+++||++|.++|++++.+++|||++|+.+...+..++ +.+||||+|+++++.+.
T Consensus 1 fDi~~~Csg~~~aL~~A~~~i~sg~~~~vLvv~~e~~s~~~~~~d~~~~~lfGDga~A~il~~~~~ 66 (80)
T pfam08545 1 FDINAACSGFVYALSTAAALIRSGRAKNVLVVGAETLSRILDWTDRSTAVLFGDGAGAVVLEATEE 66 (80)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCEEEEEEEEECCC
T ss_conf 960641488999999999999879988589985112455368667724699864026999997178
No 59
>PRK07855 lipid-transfer protein; Provisional
Probab=99.07 E-value=2.9e-07 Score=64.20 Aligned_cols=97 Identities=19% Similarity=0.228 Sum_probs=71.9
Q ss_pred HCCCCEEEECCCCCCHHHHHHHHHHHHHHHCC--HHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEE-EECCCHH
Q ss_conf 03832466559985999999999999997279--57868999945788754600588886320268773589-8414203
Q gi|254781019|r 36 GIGQERMSVLNPDEDIVTMAAAAALPIMQNQD--KNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVV-ELKQACY 112 (396)
Q Consensus 36 ~lGi~~r~v~~~~Ed~~tmA~~Aa~~~L~~~~--~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~-Di~~aC~ 112 (396)
|.|+.... -.++.+...|+++|++++|++++ ++|||.+++.+.. ..+. ..+.+.+|+.. ...+ .+.++|.
T Consensus 10 GvG~t~f~-r~~~~s~~~L~~eA~~~AL~DAGl~~~dIDg~~~~~~~---~~~~--~~ia~~lG~~~-~~~~~~v~~~g~ 82 (386)
T PRK07855 10 GIGATEFS-KNSGRSELRLACEAVLAALDDAGLAPSDVDGLVTFTMD---TNPE--IAVARAVGIGE-LKFFSQIGYGGG 82 (386)
T ss_pred EEEEECCE-ECCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECC---CCCH--HHHHHHCCCCC-CCCCCCCCCCCH
T ss_conf 75530224-68998999999999999999759999996999896078---8828--99999719988-753221478855
Q ss_pred HHHHHHHHHHHHHHCCCCCEEEEEECC
Q ss_conf 588899878999973999769995033
Q gi|254781019|r 113 SATCALHMACALVAKSPERKVLIVASD 139 (396)
Q Consensus 113 g~~~AL~~A~~~i~sg~~~~aLVV~sD 139 (396)
++..++..|...|++|....+|++.++
T Consensus 83 s~~~~~~~A~~aIasG~~d~vl~~~~~ 109 (386)
T PRK07855 83 AACATVQQAAMAVATGVADVVVAYRAF 109 (386)
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEEEEE
T ss_conf 799999999999973877789999741
No 60
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=99.07 E-value=3.7e-08 Score=69.72 Aligned_cols=99 Identities=14% Similarity=0.097 Sum_probs=83.0
Q ss_pred CCCCHHHHHHHHHHHHHHHC--CHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHH
Q ss_conf 98599999999999999727--9578689999457887546005888863202687735898414203588899878999
Q gi|254781019|r 47 PDEDIVTMAAAAALPIMQNQ--DKNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACAL 124 (396)
Q Consensus 47 ~~Ed~~tmA~~Aa~~~L~~~--~~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~ 124 (396)
.+..+.+|++.+.+.+|++. +|++||.||++...+.......+-.+.=..|++..++++.++..|.+++.|+.+|...
T Consensus 27 ~~~~~~~L~a~~i~~~l~r~~~~~~~Id~vi~G~~~~~g~g~n~aR~~~L~aGlp~~vpa~tVnr~C~SGl~Ai~~a~~~ 106 (397)
T PRK06954 27 ASLTAPQLGAAAIAAAVERAGLKPEQIDEVVMGCVLPAGQGQAPARQAALGAGLPLSVGCTTVNKMCGSGMRAAMFAHDM 106 (397)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHHHHHHHH
T ss_conf 89999999999999999873989899798999823655656649999999769998887788726658999999999999
Q ss_pred HHCCCCCEEEEEECCCCCCCC
Q ss_conf 973999769995033201458
Q gi|254781019|r 125 VAKSPERKVLIVASDVARYDL 145 (396)
Q Consensus 125 i~sg~~~~aLVV~sD~~~~~~ 145 (396)
|++|....+|+.+.|.++..+
T Consensus 107 I~sG~~dvvlagGvEsmS~~P 127 (397)
T PRK06954 107 LVAGSVDVIVAGGMESMTNAP 127 (397)
T ss_pred HHCCCCCEEEEECCCCCCCCC
T ss_conf 967997456763344567675
No 61
>TIGR03150 fabF 3-oxoacyl-[acyl-carrier-protein] synthase 2. FabB sequences should fall well below the noise cutoff of this model.
Probab=99.07 E-value=7.6e-08 Score=67.77 Aligned_cols=265 Identities=16% Similarity=0.119 Sum_probs=142.3
Q ss_pred CCEEEEEEEECCCEEECHHHHHHHC--CCC-HHHHHH--HCCCCEEE---ECCCC--------C----CHH-HHHHHHHH
Q ss_conf 6206688873489045599999870--999-879763--03832466---55998--------5----999-99999999
Q gi|254781019|r 2 AIGIEDISFYTTNQYLDLSVIAEKY--RLD-VAKFYV--GIGQERMS---VLNPD--------E----DIV-TMAAAAAL 60 (396)
Q Consensus 2 ~vGI~~i~~y~P~~~v~~~~l~~~~--g~~-~~k~~~--~lGi~~r~---v~~~~--------E----d~~-tmA~~Aa~ 60 (396)
.|-|.+|+.-+|.-. +.+++-+.. |.+ ..++.+ .-+...+. +.+.| | |.. -+++.|+.
T Consensus 2 rVaItG~g~~~P~g~-~~~~~w~~L~~g~s~i~~~~~~d~~~~~~~~~g~v~~fd~~~~i~~~~a~~~dp~~~l~l~aa~ 80 (407)
T TIGR03150 2 RVVVTGLGAVTPLGN-GVEEFWENLLAGKSGIGPITRFDASDLPVKIAGEVKDFDPEDYIDKKEARRMDRFIQYALAAAK 80 (407)
T ss_pred EEEEEECEEECCCCC-CHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEEECCCCHHHCCCHHHHHHCCHHHHHHHHHHH
T ss_conf 399984677897979-9999999997399744436877864687756777278894665899999751999999999999
Q ss_pred HHHHHCC--HHHCC----EEEEECCCCC----------------CC----------CHHHHHHHHHHHCCCCCCEEEEEC
Q ss_conf 9997279--57868----9999457887----------------54----------600588886320268773589841
Q gi|254781019|r 61 PIMQNQD--KNLID----TLFFATESSV----------------DQ----------SKSAAIWLHKLLGLNSSCRVVELK 108 (396)
Q Consensus 61 ~~L~~~~--~~~Id----~li~~T~t~~----------------~~----------~~~~a~~v~~~Lgl~~~~~~~Di~ 108 (396)
++|++++ +++++ .|+++|..+. +. ....+..|...+++... ++-+.
T Consensus 81 ~Al~dAG~~~~~~~~~~~gv~~gs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~is~~~~l~Gp--~~tv~ 158 (407)
T TIGR03150 81 EAVEDSGLDIEEEDAERVGVIVGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQISIRYGAKGP--NHAVV 158 (407)
T ss_pred HHHHHCCCCHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC--CCCCC
T ss_conf 9998639984452866459999257674577999999998538444585401576625899999998599996--44644
Q ss_pred CCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC------------------CCCCCC--------CCCCCCEEEEEE
Q ss_conf 420358889987899997399976999503320145------------------888753--------347830246884
Q gi|254781019|r 109 QACYSATCALHMACALVAKSPERKVLIVASDVARYD------------------LGSSGE--------PTQGCGAVAILI 162 (396)
Q Consensus 109 ~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~------------------~~~~~~--------~t~GaGA~Allv 162 (396)
.+|++++.||..|..+|++|....+||.++|..... +....+ +..|.||+++++
T Consensus 159 taCsSsl~Al~~A~~~i~~G~~d~aivGG~~~~l~~~~~~~f~~~~~ls~~~~~p~~~~rPFD~~a~G~v~gEGa~~vvL 238 (407)
T TIGR03150 159 TACATGTHAIGDAFRLIQYGDADVMIAGGAEAAITPLGIAGFAAMKALSTRNDDPEKASRPFDKDRDGFVMGEGAGVLVL 238 (407)
T ss_pred CHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE
T ss_conf 44389999999999998739854655037443579899999998877730678987776542247997445484578740
Q ss_pred CCC-------CCCCEEEECCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCC
Q ss_conf 268-------7630353100015678651127588754235660169899999999999999962988211012331145
Q gi|254781019|r 163 SSQ-------TSILEIEDITGIYTNDCMDFWRPNYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHDFNDFQYFCYHQP 235 (396)
Q Consensus 163 ~~~-------~~~~~~~~~~~~~~~~~~df~rp~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~~did~~v~H~p 235 (396)
.+. .++......++.. .|....-.| .+ ++ .....++++.+++.+++++||+|+..|-.
T Consensus 239 e~~~~A~~~g~~I~a~i~g~g~~-~d~~~~t~~----~p--~~--------~~~~~~i~~al~~agi~~~~I~yIe~Hgt 303 (407)
T TIGR03150 239 EELEHAKARGAKIYAEIVGYGMS-GDAYHITAP----AP--EG--------EGAARAMRAALKDAGINPEDVDYINAHGT 303 (407)
T ss_pred CCHHHHHHCCCEEEEEEEEEEEE-CCCCCCCCC----CC--CC--------HHHHHHHHHHHHHHCCCCCCEEEEEEECC
T ss_conf 66999987799689998210550-158876465----99--81--------67888999999986899863349997368
Q ss_pred CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
Q ss_conf 4057888886411024544100134555433344453238543233899999999
Q gi|254781019|r 236 FTRMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALISLL 290 (396)
Q Consensus 236 ~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~slL 290 (396)
+....+..........-.+. ...+ +....-..+|++-.||=.+.|...+
T Consensus 304 gt~~~D~~E~~al~~~fg~~-----~~~~-~i~S~K~~~GH~~~AaG~~~lik~~ 352 (407)
T TIGR03150 304 STPLGDKAETKAIKRVFGDH-----AYKL-AVSSTKSMTGHLLGAAGAIEAIFTV 352 (407)
T ss_pred CCCCCCHHHHHHHHHHHCCC-----CCCC-EEECHHHHHHHHHHHHHHHHHHHHH
T ss_conf 78776999999999986256-----8986-5788555543148999999999999
No 62
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=99.06 E-value=3.7e-08 Score=69.70 Aligned_cols=98 Identities=11% Similarity=0.091 Sum_probs=79.5
Q ss_pred CCCCHHHHHHHHHHHHHHHC--CHHHCCEEEEECCCCCCCC-HHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHH
Q ss_conf 98599999999999999727--9578689999457887546-00588886320268773589841420358889987899
Q gi|254781019|r 47 PDEDIVTMAAAAALPIMQNQ--DKNLIDTLFFATESSVDQS-KSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACA 123 (396)
Q Consensus 47 ~~Ed~~tmA~~Aa~~~L~~~--~~~~Id~li~~T~t~~~~~-~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~ 123 (396)
.+-.+.+|+..+.+.+|++. +|++||.++++...+.... .-.+-...-.-|++..++++.++.+|.++..|+..|..
T Consensus 28 ~~~~~~~L~a~~~~~~l~r~gi~~~~Id~vi~G~~~~~g~~~~~~aR~~~l~aGlp~~vpa~tVn~~CaSG~~Ai~~A~~ 107 (394)
T PRK06445 28 NDLRPEELAAVLINALIEKTGIKPEEIGDVITGCALQVGENWLYGGRHVVLLAKLPYTIPAMHVDRQCASSLTTVAIGAM 107 (394)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHH
T ss_conf 78999999999999999874989899697999647555656674889999976999888748885541689999999999
Q ss_pred HHHCCCCCEEEEEECCCCCCC
Q ss_conf 997399976999503320145
Q gi|254781019|r 124 LVAKSPERKVLIVASDVARYD 144 (396)
Q Consensus 124 ~i~sg~~~~aLVV~sD~~~~~ 144 (396)
.|++|....+|+++.|.++..
T Consensus 108 ~I~sG~~dvvlAgGvEsmS~~ 128 (394)
T PRK06445 108 EIATGMADIVIAGGVEHMTHT 128 (394)
T ss_pred HHHCCCCCEEEEECEECCCCC
T ss_conf 997399999999474236678
No 63
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=99.06 E-value=4.1e-08 Score=69.45 Aligned_cols=99 Identities=16% Similarity=0.122 Sum_probs=82.3
Q ss_pred CCCCHHHHHHHHHHHHHHH---CCHHHCCEEEEECCCCCC-CCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHH
Q ss_conf 9859999999999999972---795786899994578875-460058888632026877358984142035888998789
Q gi|254781019|r 47 PDEDIVTMAAAAALPIMQN---QDKNLIDTLFFATESSVD-QSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMAC 122 (396)
Q Consensus 47 ~~Ed~~tmA~~Aa~~~L~~---~~~~~Id~li~~T~t~~~-~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~ 122 (396)
.+..+.+|++.+.+.+|++ .+|++||.++++...+.. ...-.+-++.-..|++.+++++-++..|.+++.|+.+|.
T Consensus 23 ~~~~~~~L~a~~i~~~l~r~~~l~~~~Id~vi~G~v~~~~~~g~n~aR~aaL~aGlp~~vpa~tVnr~C~SGl~Ai~~Aa 102 (387)
T PRK08947 23 RNVRAEDLSAHLMRALLARNPALDPAEIEDIIWGCVQQTLEQGFNIARNAALLAGIPHTVPAVTVNRLCGSSMQALHDAA 102 (387)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCCHHHCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHH
T ss_conf 88999999999999999745896989989899970665544333599999997699988861664014237999999999
Q ss_pred HHHHCCCCCEEEEEECCCCCCCC
Q ss_conf 99973999769995033201458
Q gi|254781019|r 123 ALVAKSPERKVLIVASDVARYDL 145 (396)
Q Consensus 123 ~~i~sg~~~~aLVV~sD~~~~~~ 145 (396)
..|++|....+|+.+.|.++..+
T Consensus 103 ~~I~~G~~dvvlaGGvEsMS~~P 125 (387)
T PRK08947 103 RAIMTGDGDVFLIGGVEHMGHVP 125 (387)
T ss_pred HHHCCCCCCEEEEEEECCCCCCC
T ss_conf 86527997789984102257786
No 64
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.05 E-value=1.9e-08 Score=71.56 Aligned_cols=264 Identities=15% Similarity=0.101 Sum_probs=146.1
Q ss_pred CCEEEEEEEECCCEEECHHHHHHHC--CCC-----HHHHHHHC-----CC-CEEEE-----CCCC----------CCH-H
Q ss_conf 6206688873489045599999870--999-----87976303-----83-24665-----5998----------599-9
Q gi|254781019|r 2 AIGIEDISFYTTNQYLDLSVIAEKY--RLD-----VAKFYVGI-----GQ-ERMSV-----LNPD----------EDI-V 52 (396)
Q Consensus 2 ~vGI~~i~~y~P~~~v~~~~l~~~~--g~~-----~~k~~~~l-----Gi-~~r~v-----~~~~----------Ed~-~ 52 (396)
+|-|.+|+..+|-- .+.+++-+.. |.+ +++..... |. ..... .+++ -|. .
T Consensus 5 rVaItGmg~~~P~g-~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~g~~~~~~~~~~~~fd~~~~i~~~~~~~~d~~~ 83 (424)
T PRK06333 5 RIVVTGMGVVSPLG-NGVETFWQRLLAGQSGIRTLTDFPCGDLATKIGGWVPELAEDAEAGFDPDPYLDPKDQRKMDRFI 83 (424)
T ss_pred CEEEECCEEECCCC-CCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCEECCCCCCCCCCCCCHHHCCCHHHHHHCCHHH
T ss_conf 89998768789898-99999999998199857548966454787742327367444543467956648999998629999
Q ss_pred HHHHHHHHHHHHHCC--HHHC-----CEEEEECCCCCC-----------------CCH---------HHHHHHHHHHCCC
Q ss_conf 999999999997279--5786-----899994578875-----------------460---------0588886320268
Q gi|254781019|r 53 TMAAAAALPIMQNQD--KNLI-----DTLFFATESSVD-----------------QSK---------SAAIWLHKLLGLN 99 (396)
Q Consensus 53 tmA~~Aa~~~L~~~~--~~~I-----d~li~~T~t~~~-----------------~~~---------~~a~~v~~~Lgl~ 99 (396)
-+++.|+.++|++++ ++++ -.++++|..+.. ..| ..+..+...+|+.
T Consensus 84 ~~~l~aa~eAl~dAG~~~~~~~~~~r~gvivgs~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~gl~ 163 (424)
T PRK06333 84 TFAMAAAKEAIAQAGWDPDNLPDRERTATIIGSGVGGFPAIAEAVRTLDSRGPRRLSPFTIPSFLTNMAAGHVSIRYGFK 163 (424)
T ss_pred HHHHHHHHHHHHHCCCCHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99999999999975998246267765799996256856889999999975486544840345677668999999981998
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC-----------C-----CCC---CC--------CC
Q ss_conf 773589841420358889987899997399976999503320145-----------8-----887---53--------34
Q gi|254781019|r 100 SSCRVVELKQACYSATCALHMACALVAKSPERKVLIVASDVARYD-----------L-----GSS---GE--------PT 152 (396)
Q Consensus 100 ~~~~~~Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~-----------~-----~~~---~~--------~t 152 (396)
.. ++-+..||++++.||..|..+|++|....+||.++|..... + .++ .+ +.
T Consensus 164 Gp--~~tv~tACsSsl~Ai~~A~~~i~~G~~d~aivGg~~~~l~~~~~~~f~~~~~Ls~~~~~~p~~~~rPFD~~~dG~v 241 (424)
T PRK06333 164 GP--LGAPVTACAAGVQAIGDAARLIRSGEADVAICGGTEAAIDRVSLAGFAAARALSTRFNDAPEQASRPFDRARDGFV 241 (424)
T ss_pred CC--CCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCE
T ss_conf 96--2150646079999999999999778706000355133227077899987666512788885435651126899714
Q ss_pred CCCCEEEEEECCC-------CCCCEEEECCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHH
Q ss_conf 7830246884268-------763035310001567865112758875423566016989999999999999996298821
Q gi|254781019|r 153 QGCGAVAILISSQ-------TSILEIEDITGIYTNDCMDFWRPNYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHDFN 225 (396)
Q Consensus 153 ~GaGA~Allv~~~-------~~~~~~~~~~~~~~~~~~df~rp~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~~ 225 (396)
.|.||+++++.+. ..+......++... |......| .+ + .+....++++.+++.|++++
T Consensus 242 ~gEGa~~~vLe~~~~A~~rg~~i~a~i~G~g~~~-d~~~~~~~----~~--~--------~~~~~~~m~~Al~~agi~~~ 306 (424)
T PRK06333 242 MGEGAGILVIETLEHALARGAPPLAELVGYGTTA-DAYHITSG----PE--D--------GEGARRAMEGALRQAGIPPE 306 (424)
T ss_pred ECCCCCHHHCCCHHHHHHCCCCEEEEEEEEEEEC-CCCCCCCC----CC--C--------HHHHHHHHHHHHHHCCCCCC
T ss_conf 0785212311668778658996689998789857-99888889----98--8--------36779999999998499914
Q ss_pred HCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
Q ss_conf 10123311454057888886411024544100134555433344453238543233899999999
Q gi|254781019|r 226 DFQYFCYHQPFTRMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALISLL 290 (396)
Q Consensus 226 did~~v~H~p~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~slL 290 (396)
||+|+..|-.+.+..+....+-........ ..+ +....-..+|++.+||=.+.|...+
T Consensus 307 ~i~yI~aHgtgT~~gD~~E~~al~~~fg~~------~~~-~i~S~K~~~GH~~~aaG~~~~i~~~ 364 (424)
T PRK06333 307 QVQHLNAHATSTPVGDLGEVAAIKKVFGHV------KGL-AISSTKSATGHLLGAAGGVEAIFTI 364 (424)
T ss_pred CCCEEEECCCCCCCCCHHHHHHHHHHHCCC------CCC-CCCCCHHHHCCCHHHHHHHHHHHHH
T ss_conf 518799527878666999999999985878------888-6478111003257889999999999
No 65
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=99.00 E-value=1.5e-07 Score=65.99 Aligned_cols=253 Identities=12% Similarity=0.059 Sum_probs=131.8
Q ss_pred HCCCCEEEECCCCCCHHHHHHHHHHHHHHHCC---H-HHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCH
Q ss_conf 03832466559985999999999999997279---5-7868999945788754600588886320268773589841420
Q gi|254781019|r 36 GIGQERMSVLNPDEDIVTMAAAAALPIMQNQD---K-NLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQAC 111 (396)
Q Consensus 36 ~lGi~~r~v~~~~Ed~~tmA~~Aa~~~L~~~~---~-~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC 111 (396)
|.|+....--.++-+...|+++|+++||++++ | +|||.++.+.........-...+....+|+. ..+. ...|
T Consensus 8 GvG~t~f~~~~~d~s~~eL~~eA~~~Al~DAG~~~~~~did~~~~~~~~~~~g~~~~~~~~~~~lG~~-~~p~---~~v~ 83 (375)
T PRK06066 8 GIGWYGFKPTTPDLSFREMMFEAAVRAYEDAGGINPRRDVDAFISCQEDFWEGIAISDEFAPDPIGGA-MRPT---MTVA 83 (375)
T ss_pred ECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHEEEEEECCCCCCCCHHHHHHHHHHHHCCC-CCCE---EEEE
T ss_conf 61367768999998999999999999999679998665600676613333440557877658762466-7854---8852
Q ss_pred HHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCC----------CCC---------------------------------
Q ss_conf 3588899878999973999769995033201458----------887---------------------------------
Q gi|254781019|r 112 YSATCALHMACALVAKSPERKVLIVASDVARYDL----------GSS--------------------------------- 148 (396)
Q Consensus 112 ~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~~----------~~~--------------------------------- 148 (396)
.++..||..|...|++|....+||++.+..+... +..
T Consensus 84 ~~G~~al~~A~~aIaSG~~dvvlv~g~~k~s~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~al~A~rym~~yG~t~E~lA 163 (375)
T PRK06066 84 GDGLQGLAHAYMHINSGLADVVVVESHAKPSDILTFPDVVKFAMDPIYLRPLGPPNPHFLAGLEAVKFMARRGVTREDLA 163 (375)
T ss_pred CHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHHH
T ss_conf 77999999999999719888899970446677665111444046855002368765999999999999988697999999
Q ss_pred ------------------------------------CC----CCCCCCEEEEEECCCCCC-------CEEEECCCCCCCC
Q ss_conf ------------------------------------53----347830246884268763-------0353100015678
Q gi|254781019|r 149 ------------------------------------GE----PTQGCGAVAILISSQTSI-------LEIEDITGIYTND 181 (396)
Q Consensus 149 ------------------------------------~~----~t~GaGA~Allv~~~~~~-------~~~~~~~~~~~~~ 181 (396)
.+ ..-.|||+|+++.++... +.+... +..+ +
T Consensus 164 ~vavk~r~~A~~NP~A~~~~~~t~edvl~s~~ia~PL~~~dc~~~sDGAaA~Vv~s~~~A~~~~~~pv~i~g~-g~~~-~ 241 (375)
T PRK06066 164 LVVEKNKKAGLKNPRASYASNVSLDDVLSSEYVVYPLTELDIAPFVDGAIVVVLASEEVARKLTDTPVWIKGI-GWAT-D 241 (375)
T ss_pred HHHHHHHHHHHHCCHHHCCCCCCHHHHCCCCCEECCCCCCCCCCCCCCEEEEEEECHHHHHHCCCCCEEEEEE-EEEC-C
T ss_conf 9999999988539840306999999980797650575300226676842899993589997568998899999-9852-6
Q ss_pred CCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCC--HHHCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHH
Q ss_conf 651127588754235660169899999999999999962988--211012331145405788888641102454410013
Q gi|254781019|r 182 CMDFWRPNYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHD--FNDFQYFCYHQPFTRMAEKAHIRLSKIVHQNLSVAE 259 (396)
Q Consensus 182 ~~df~rp~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~--~~did~~v~H~p~~k~~~~~~~~l~~~~~~~~~~~~ 259 (396)
...+...++. .......+.+...+..|++ .+|||.+-+|-+|.-+.......+... .+ ....
T Consensus 242 ---~~~~~~~~~~----------~~~~~~~a~~~Ay~~Agi~~p~~DiDv~elyD~ft~~~l~~lE~lG~~-ge--g~~~ 305 (375)
T PRK06066 242 ---TSNLETADLG----------KAMYMRKAADMAYKMAGIASPAKEVDFAFVDDRYSYKELQHIEALGLA-GK--AAKD 305 (375)
T ss_pred ---CCCCCCCCCC----------CCHHHHHHHHHHHHHCCCCCCHHHCCEEEECCCCCHHHHHHHHHCCCC-CH--HHHH
T ss_conf ---8776622345----------336899999999998079998666615575166619999999984898-42--8899
Q ss_pred HH---------HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH-----CCCCCCCCEEEEEEECCCC
Q ss_conf 45---------5543334445323854323389999999971-----5743698889998407983
Q gi|254781019|r 260 IE---------KAIGITTLYNRLIGNSYTASLYIALISLLDH-----SSENLAGKRVGFFSYGSGC 311 (396)
Q Consensus 260 ~e---------~~~~~~~~~~~~~GN~~SASi~l~L~slLe~-----~~~~~~G~rIll~syGsG~ 311 (396)
++ -.++++-=.. -.||...++=...+.++..| ..+..+|-++++...+-|.
T Consensus 306 ~~~G~~~~~G~~PvNtsGG~l-s~Ghp~ga~G~~~~~E~~~QLrg~ag~RQV~gA~~gl~~~~g~~ 370 (375)
T PRK06066 306 LREGYFEPGGELPVNPSGGHL-AKGVPLEASGLSLLLDAVEYLRQGGVERAVVASWRGIPTFTGSV 370 (375)
T ss_pred HHCCCCCCCCCCCEECCCCHH-HCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCEE
T ss_conf 977995679982060898244-28985750699999999999743530432167887013376439
No 66
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=98.97 E-value=4e-07 Score=63.27 Aligned_cols=99 Identities=16% Similarity=0.203 Sum_probs=83.8
Q ss_pred CCCCHHHHHHHHHHHHHHHC--CHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHH
Q ss_conf 98599999999999999727--9578689999457887546005888863202687735898414203588899878999
Q gi|254781019|r 47 PDEDIVTMAAAAALPIMQNQ--DKNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACAL 124 (396)
Q Consensus 47 ~~Ed~~tmA~~Aa~~~L~~~--~~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~ 124 (396)
.+..+.+|++.+.+.+|++. +|++||.||++...+.-...-.+-.+.-..|++..++++-++..|.+++.|+.+|...
T Consensus 22 ~~~~~~~L~a~~i~~~l~r~~i~p~~Id~Vi~G~v~~~g~g~n~aR~~aL~aGlp~~vp~~tVnr~C~SGl~Ai~~Aa~~ 101 (392)
T PRK05656 22 ANIPAVDLGAAVIRQLLEQTGLDPAQVDEVILGQVLTAGAGQNPARQAAIKAGLPHSVPAMTLNKVCGSGLKALHLAAQA 101 (392)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHH
T ss_conf 89988999999999999983999899898999904765666639999999779998886489852536778999999999
Q ss_pred HHCCCCCEEEEEECCCCCCCC
Q ss_conf 973999769995033201458
Q gi|254781019|r 125 VAKSPERKVLIVASDVARYDL 145 (396)
Q Consensus 125 i~sg~~~~aLVV~sD~~~~~~ 145 (396)
|++|....+|+.+.|.++..+
T Consensus 102 I~~G~~dv~iagGvEsmS~~P 122 (392)
T PRK05656 102 IRCGDAEVIIAGGQENMSLAP 122 (392)
T ss_pred HHCCCCCEEEEECCCCCCCCC
T ss_conf 866997578983433367886
No 67
>PRK09051 beta-ketothiolase; Provisional
Probab=98.96 E-value=4e-07 Score=63.29 Aligned_cols=100 Identities=9% Similarity=0.037 Sum_probs=83.5
Q ss_pred CCCCCHHHHHHHHHHHHHHHC--CHHHCCEEEEECCCCCCC-CHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHH
Q ss_conf 998599999999999999727--957868999945788754-60058888632026877358984142035888998789
Q gi|254781019|r 46 NPDEDIVTMAAAAALPIMQNQ--DKNLIDTLFFATESSVDQ-SKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMAC 122 (396)
Q Consensus 46 ~~~Ed~~tmA~~Aa~~~L~~~--~~~~Id~li~~T~t~~~~-~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~ 122 (396)
-.+..+.+|++.+.+.+|++. +|++||.||++...+... ....+-...-..|++.+++++-++.+|.+++.|+.+|.
T Consensus 22 l~~~~~~~L~a~~i~~~l~r~~i~p~~Id~Vi~G~v~~~g~~~~niaR~aal~aGlp~~vp~~tVnr~C~SGl~Ai~~Aa 101 (394)
T PRK09051 22 LKDFAPTDLGAIVVREALARAGVDGDQVGHVVFGHVIPTEPRDMYLSRVAAINAGVPQETPALNVNRLCGSGLQAIVSAA 101 (394)
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHH
T ss_conf 78998899999999999987198989989799992355676676789999997699988871887155477899999999
Q ss_pred HHHHCCCCCEEEEEECCCCCCCC
Q ss_conf 99973999769995033201458
Q gi|254781019|r 123 ALVAKSPERKVLIVASDVARYDL 145 (396)
Q Consensus 123 ~~i~sg~~~~aLVV~sD~~~~~~ 145 (396)
..|++|....+|+.+.|.++..+
T Consensus 102 ~~I~~G~~d~viAGGvEsmS~~P 124 (394)
T PRK09051 102 QAILLGDADVAIGGGAESMSRAP 124 (394)
T ss_pred HHHHCCCCCEEEEECCHHCCCCC
T ss_conf 99976998877872410203585
No 68
>PRK07124 consensus
Probab=98.96 E-value=1.4e-08 Score=72.33 Aligned_cols=99 Identities=13% Similarity=0.092 Sum_probs=85.3
Q ss_pred CCCCHHHHHHHHHHHHHHHC--CHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHH
Q ss_conf 98599999999999999727--9578689999457887546005888863202687735898414203588899878999
Q gi|254781019|r 47 PDEDIVTMAAAAALPIMQNQ--DKNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACAL 124 (396)
Q Consensus 47 ~~Ed~~tmA~~Aa~~~L~~~--~~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~ 124 (396)
.+.++.+|+..|++.+|++. +|++||.+++++..+.......+-.+.-..|++..++++.++.+|.++..|+.+|...
T Consensus 22 ~~~~~~~L~~~ai~~al~~~~i~~~~Id~vi~G~v~~~g~g~n~ar~~al~aGlp~~iP~~tV~~aCaSG~~Ai~~A~~~ 101 (402)
T PRK07124 22 KSVPAGELAGVAIKGALEQAKVSPEAIDEVIVGNVVSAGQGMGPGRQAAIFAGIPEEVPAYSLNMVCGSGMKTVMDAVSH 101 (402)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHH
T ss_conf 89999999999999999983989899998999934755556679999999769998885699725778999999999999
Q ss_pred HHCCCCCEEEEEECCCCCCCC
Q ss_conf 973999769995033201458
Q gi|254781019|r 125 VAKSPERKVLIVASDVARYDL 145 (396)
Q Consensus 125 i~sg~~~~aLVV~sD~~~~~~ 145 (396)
|++|....+|+++.|..+..+
T Consensus 102 I~sG~~dvvlagGvEsmS~~P 122 (402)
T PRK07124 102 IKAGDAEVVVAAGVEVMSQIP 122 (402)
T ss_pred HHCCCCCEEEECCEECCCCCC
T ss_conf 867997678965510156676
No 69
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=98.94 E-value=1.3e-07 Score=66.32 Aligned_cols=216 Identities=16% Similarity=0.164 Sum_probs=125.1
Q ss_pred HHHHHHHHHHHHHCC--HHHCC----EEEEECCCCCCCC------------------HH-HHHHHHHHHCCCCCCEEEEE
Q ss_conf 999999999997279--57868----9999457887546------------------00-58888632026877358984
Q gi|254781019|r 53 TMAAAAALPIMQNQD--KNLID----TLFFATESSVDQS------------------KS-AAIWLHKLLGLNSSCRVVEL 107 (396)
Q Consensus 53 tmA~~Aa~~~L~~~~--~~~Id----~li~~T~t~~~~~------------------~~-~a~~v~~~Lgl~~~~~~~Di 107 (396)
-|+++++.+||++++ +++++ -|++++....+.. ++ .+..|...|++..- ++-+
T Consensus 89 rl~L~~a~~Al~dAG~~~~~l~~~r~GV~vG~~~~d~~~~~~~~~~~~~~~~~~~~~~s~~a~ris~~~~l~Gp--~~~v 166 (424)
T smart00825 89 RLLLEVAWEALEDAGIDPESLRGSRTGVFVGAMSSDYAELLARDPEDIEGYAATGTARSFIANRISYFFDLRGP--SVTV 166 (424)
T ss_pred HHHHHHHHHHHHHCCCCHHHCCCCCEEEEEEECCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC--EEEE
T ss_conf 99999999999973998356588743899975166377776417555785202453176899999998589996--3514
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC-------------CCCCCC--------CCCCCCEEEEEECCC-
Q ss_conf 1420358889987899997399976999503320145-------------888753--------347830246884268-
Q gi|254781019|r 108 KQACYSATCALHMACALVAKSPERKVLIVASDVARYD-------------LGSSGE--------PTQGCGAVAILISSQ- 165 (396)
Q Consensus 108 ~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~-------------~~~~~~--------~t~GaGA~Allv~~~- 165 (396)
..||++++.||..|..+|++|....+||-+++..... ++...+ +..|.|++++++.+.
T Consensus 167 dtACsSsl~Al~~A~~~i~~G~~D~alvGg~~~~~~p~~~~~~~~~~~lS~~g~~rpFD~~adG~v~gEGa~~lvLk~l~ 246 (424)
T smart00825 167 DTACSSSLVALHLACQSLRSGECDMALAGGVNLILSPDTFVGFSRAGMLSPDGRCKTFDADADGYVRGEGVGVVVLKRLS 246 (424)
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHH
T ss_conf 14728999999999999976996330014266734878999986157879999875577889984104765799746599
Q ss_pred ------CCCCEEEECCCCCCCC-CCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCCH
Q ss_conf ------7630353100015678-651127588754235660169899999999999999962988211012331145405
Q gi|254781019|r 166 ------TSILEIEDITGIYTND-CMDFWRPNYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHDFNDFQYFCYHQPFTR 238 (396)
Q Consensus 166 ------~~~~~~~~~~~~~~~~-~~df~rp~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~~did~~v~H~p~~k 238 (396)
+++.......+..... ...+..|+ .+...+++++.+++.+++++||+|+-.|-.+.+
T Consensus 247 ~A~~~g~~Iya~I~G~~~~~dG~~~~~~~P~----------------~~~~~~~~~~Al~~a~i~p~~I~yieaHgtgt~ 310 (424)
T smart00825 247 DALRDGDPILAVIRGSAVNQDGRSNGLTAPS----------------GPAQARLIRQALARAGVDPADVDYVEAHGTGTP 310 (424)
T ss_pred HHHHCCCCEEEEEECEEEECCCCCCCCCCCC----------------HHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCC
T ss_conf 9987699179999343782589878778999----------------899999999999982989664687996036687
Q ss_pred HHHHHHHHHCCHH-HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
Q ss_conf 7888886411024-544100134555433344453238543233899999999
Q gi|254781019|r 239 MAEKAHIRLSKIV-HQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALISLL 290 (396)
Q Consensus 239 ~~~~~~~~l~~~~-~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~slL 290 (396)
+.+.....-.... .+... -...+. ....-..+|++.+||=.++|...+
T Consensus 311 ~gD~~E~~al~~~f~~~~~---~~~~~~-igS~K~~~GH~~~AaG~~~lik~~ 359 (424)
T smart00825 311 LGDPIEAEALAAVFGQGRP---RDGPLL-LGSVKSNIGHLEAAAGVAGLIKVV 359 (424)
T ss_pred CCCHHHHHHHHHHHCCCCC---CCCCEE-ECCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 7799999999999623688---778425-204534423337778999999999
No 70
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=98.94 E-value=2.1e-06 Score=58.81 Aligned_cols=98 Identities=13% Similarity=0.142 Sum_probs=83.3
Q ss_pred CCCCHHHHHHHHHHHHHHHC--CHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHH
Q ss_conf 98599999999999999727--9578689999457887546005888863202687735898414203588899878999
Q gi|254781019|r 47 PDEDIVTMAAAAALPIMQNQ--DKNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACAL 124 (396)
Q Consensus 47 ~~Ed~~tmA~~Aa~~~L~~~--~~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~ 124 (396)
.+..+.+|++.+.+.+|++. +|++||-||++.........-.+-...-..|++.+++++.++..|.+++.|+.+|...
T Consensus 23 ~~~~~~~L~a~vi~~~l~r~~i~p~~Id~Vi~G~v~~~~~g~n~AR~aaL~aGlp~~vp~~TVnr~C~SGl~Ai~~aa~~ 102 (392)
T PRK06633 23 STTPAPMLAAHLIKDILQNSKIDPALVNEVILGQVITGGSGQNPARQTLIHAGIPKEVPGYTINKVCGSGLKSVALAANS 102 (392)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHH
T ss_conf 88988999999999999874999899998999915756656669999999769998887268877337999999999999
Q ss_pred HHCCCCCEEEEEECCCCCCC
Q ss_conf 97399976999503320145
Q gi|254781019|r 125 VAKSPERKVLIVASDVARYD 144 (396)
Q Consensus 125 i~sg~~~~aLVV~sD~~~~~ 144 (396)
|++|....+++.+.|.++..
T Consensus 103 I~~G~~dvviaGGvEsmS~~ 122 (392)
T PRK06633 103 IMTGDNEIVIAGGQENMSLG 122 (392)
T ss_pred HHCCCCCEEEEECCCCCCCC
T ss_conf 96799867774033545544
No 71
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=98.94 E-value=1.7e-07 Score=65.56 Aligned_cols=216 Identities=16% Similarity=0.135 Sum_probs=124.1
Q ss_pred HHHHHHHHHHHHHHHCC--H-----HHCCEEEEECCCCC---------------------CCCH-----HHHHHHHHHHC
Q ss_conf 99999999999997279--5-----78689999457887---------------------5460-----05888863202
Q gi|254781019|r 51 IVTMAAAAALPIMQNQD--K-----NLIDTLFFATESSV---------------------DQSK-----SAAIWLHKLLG 97 (396)
Q Consensus 51 ~~tmA~~Aa~~~L~~~~--~-----~~Id~li~~T~t~~---------------------~~~~-----~~a~~v~~~Lg 97 (396)
...+|+.|++.||++++ + +.++. +++|..+. +..| ..+.+|...++
T Consensus 134 ~~~~al~Aa~eAl~DAgl~~~~~~~~r~Gv-~iGs~~gg~~~~e~~~~~l~~~g~~~v~p~~~~~~~~n~~a~~is~~~~ 212 (477)
T PTZ00050 134 CTHYAVAATRLAIDDAKIDLEKIDCDKTGT-IIGSGIGGLLFLEKEMKTLYEKGHKRISPYLIPAMIANTPAGFVSIEHN 212 (477)
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCCCE-EEECCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 999999999999996799954367101534-8704877389999999999854977438527778887699999999739
Q ss_pred CCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC-----------C-----CCC---CCC-------
Q ss_conf 68773589841420358889987899997399976999503320145-----------8-----887---533-------
Q gi|254781019|r 98 LNSSCRVVELKQACYSATCALHMACALVAKSPERKVLIVASDVARYD-----------L-----GSS---GEP------- 151 (396)
Q Consensus 98 l~~~~~~~Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~-----------~-----~~~---~~~------- 151 (396)
+..- .+-+..||++++.||..|..+|++|....+|+-++|..... + +++ .+|
T Consensus 213 l~Gp--s~ti~tACaSs~~AI~~A~~~Ir~G~~d~~IaGG~d~~l~p~~~~~f~~l~aL~s~~nd~P~~~~rPFD~~rdG 290 (477)
T PTZ00050 213 IRGI--SLGMLSACATSGNTIGEAYRYIKYKEYDVMICGGTEASITPISFAGFNALKALCSGYNDNPKKGCRPFDLKRSG 290 (477)
T ss_pred CCCC--CCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
T ss_conf 9487--56704474788999999999997598455999845666672889999987655403678987672446589982
Q ss_pred -CCCCCEEEEEECCCC-------CCCEEEECCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf -478302468842687-------630353100015678651127588754235660169899999999999999962988
Q gi|254781019|r 152 -TQGCGAVAILISSQT-------SILEIEDITGIYTNDCMDFWRPNYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHD 223 (396)
Q Consensus 152 -t~GaGA~Allv~~~~-------~~~~~~~~~~~~~~~~~df~rp~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~ 223 (396)
..|-||+++++++.. .+.......+.. .|......| .| + .+.+.+++++.+++.+++
T Consensus 291 ~V~GEGag~lVLE~~e~A~~RGa~Iyaei~G~~~~-~Dg~~~t~p----~p--~--------g~g~~~am~~AL~~Agl~ 355 (477)
T PTZ00050 291 FVMGEGAGILILESYEHAIKRNAKIYGEIIAYSSE-CDAFHITAP----EP--N--------GKGLCNSIHKAIKNANIN 355 (477)
T ss_pred EEECCCEEEEEEEEHHHHHHCCCEEEEEEECCCCC-CCCCCCCCC----CC--C--------HHHHHHHHHHHHHHHCCC
T ss_conf 77237658999728877765899886752055424-689988774----97--9--------999999999999971789
Q ss_pred HHHCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
Q ss_conf 2110123311454057888886411024544100134555433344453238543233899999999
Q gi|254781019|r 224 FNDFQYFCYHQPFTRMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALISLL 290 (396)
Q Consensus 224 ~~did~~v~H~p~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~slL 290 (396)
++||||+..|-.+.++.+....+-...+-.+.. .++ +....=..+|++-.|+=-+.+...+
T Consensus 356 ~~dIdyInaHGTgT~~gD~~E~~Ai~~vfg~~~-----~~~-~VsS~Ks~iGH~lgAAGa~e~i~~l 416 (477)
T PTZ00050 356 INDVKYINAHGTSTNLNDKIETKVFKNVFKDHA-----YKL-HISSTKSMTGHCIGAAGAIESIVCL 416 (477)
T ss_pred CCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCC-----CCC-EEECCHHHHCCCHHHHHHHHHHHHH
T ss_conf 745008996177688789999999999865789-----986-5888613330047999999999999
No 72
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=98.93 E-value=1.3e-06 Score=60.20 Aligned_cols=98 Identities=15% Similarity=0.194 Sum_probs=81.2
Q ss_pred CCCCHHHHHHHHHHHHHHHC--CHHHCCEEEEECCCCCC-CCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHH
Q ss_conf 98599999999999999727--95786899994578875-4600588886320268773589841420358889987899
Q gi|254781019|r 47 PDEDIVTMAAAAALPIMQNQ--DKNLIDTLFFATESSVD-QSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACA 123 (396)
Q Consensus 47 ~~Ed~~tmA~~Aa~~~L~~~--~~~~Id~li~~T~t~~~-~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~ 123 (396)
.+-.+.+|++.+.+.++++. +|++||-||++.....- .....+-++.=.-|++.+++++-++..|.+++.|+.+|..
T Consensus 25 ~~~~~~~Lga~~i~~~l~r~gi~p~~ID~Vi~G~v~~~g~~g~n~aR~aaL~AGlp~~vpa~TVnr~C~SGl~Ai~~aa~ 104 (417)
T PRK06025 25 AHLHPQHLAATVLKALAERNGLNTADVDDIIWSTSSQRGKQGGDLGRMAALDAGYDIKASGVTLDRFCGGGITSVNLAAA 104 (417)
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCHHHCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHH
T ss_conf 99989999999999999870989799898999807776543465999999967999888607875746408999999999
Q ss_pred HHHCCCCCEEEEEECCCCCCC
Q ss_conf 997399976999503320145
Q gi|254781019|r 124 LVAKSPERKVLIVASDVARYD 144 (396)
Q Consensus 124 ~i~sg~~~~aLVV~sD~~~~~ 144 (396)
.|++|....+++.+.|.+++.
T Consensus 105 ~I~~G~~dvviAGGvEsmS~~ 125 (417)
T PRK06025 105 QIMSGMEDLVIAGGTEMMSYT 125 (417)
T ss_pred HHHCCCCCEEEEEEEECCCCC
T ss_conf 997699986789534236766
No 73
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=98.93 E-value=1.3e-07 Score=66.26 Aligned_cols=98 Identities=8% Similarity=0.077 Sum_probs=81.1
Q ss_pred CCCCHHHHHHHHHHHHHHHC--CHHHCCEEEEECCCCCC-CCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHH
Q ss_conf 98599999999999999727--95786899994578875-4600588886320268773589841420358889987899
Q gi|254781019|r 47 PDEDIVTMAAAAALPIMQNQ--DKNLIDTLFFATESSVD-QSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACA 123 (396)
Q Consensus 47 ~~Ed~~tmA~~Aa~~~L~~~--~~~~Id~li~~T~t~~~-~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~ 123 (396)
.+..+.+|++.+.+.+|++. +|++||-||++...+.- ...-.+-...=.-|++.+++++-++..|.+++.|+.+|..
T Consensus 23 ~~~~~~eL~a~~i~~~l~r~gi~~~~Id~Vi~G~v~~~g~~g~n~aR~aaL~aGlp~~vpa~tVnr~C~SGl~Ai~~Aa~ 102 (392)
T PRK07108 23 NMTHGATLGGHVVAAAVERAKLDPARVEDVIMGCANPEGATGANIARQIALRAGLPVTVPGMTVNRFCSSGLQTIALAAQ 102 (392)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHH
T ss_conf 89999999999999999870989899998999946655655577999999966999888627775745553899999987
Q ss_pred HHHCCCCCEEEEEECCCCCCC
Q ss_conf 997399976999503320145
Q gi|254781019|r 124 LVAKSPERKVLIVASDVARYD 144 (396)
Q Consensus 124 ~i~sg~~~~aLVV~sD~~~~~ 144 (396)
.|++|....+|+.+.|.++..
T Consensus 103 ~I~~G~~dv~iAGGvEsmS~~ 123 (392)
T PRK07108 103 RIIAGEGDVFVAGGVESISCV 123 (392)
T ss_pred HHHCCCCCEEEEECEECCCCC
T ss_conf 863899986788045114557
No 74
>PRK05790 acetyl-CoA acetyltransferase; Provisional
Probab=98.93 E-value=2.6e-08 Score=70.72 Aligned_cols=99 Identities=12% Similarity=0.129 Sum_probs=84.2
Q ss_pred CCCCHHHHHHHHHHHHHHHC--CHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHH
Q ss_conf 98599999999999999727--9578689999457887546005888863202687735898414203588899878999
Q gi|254781019|r 47 PDEDIVTMAAAAALPIMQNQ--DKNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACAL 124 (396)
Q Consensus 47 ~~Ed~~tmA~~Aa~~~L~~~--~~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~ 124 (396)
.+..+.+|+..+++.+|++. +|++||.++++...+.....-.+-.+.-..|++.+++++-++.+|.+++.|+..|...
T Consensus 22 ~~~~~~~L~~~ai~~~l~r~gi~~~~Id~vi~G~~~~~g~g~n~aR~~~l~aGlp~~vp~~tV~r~CaSG~~Ai~~A~~~ 101 (393)
T PRK05790 22 KDVSAVELGAIVIKAALERAGVPPEQVDEVIMGQVLQAGAGQNPARQAAIKAGLPVEVPALTINKVCGSGLKAVALAAQA 101 (393)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHH
T ss_conf 88999999999999999982989899998999933656655549999999679998876489963115768999999998
Q ss_pred HHCCCCCEEEEEECCCCCCCC
Q ss_conf 973999769995033201458
Q gi|254781019|r 125 VAKSPERKVLIVASDVARYDL 145 (396)
Q Consensus 125 i~sg~~~~aLVV~sD~~~~~~ 145 (396)
|++|....+|+++.|.++..+
T Consensus 102 I~sG~~dvvlagGvEsmS~~P 122 (393)
T PRK05790 102 IRAGDADIVVAGGQESMSQAP 122 (393)
T ss_pred HHCCCCCEEEEECCCCCCCCC
T ss_conf 747997689995443245674
No 75
>PRK07937 lipid-transfer protein; Provisional
Probab=98.92 E-value=1.7e-07 Score=65.54 Aligned_cols=87 Identities=13% Similarity=0.033 Sum_probs=65.9
Q ss_pred CHHHHHHHHHHHHHHHCC--HHHCCEEEEECCCCCCCCHHHHHHH--HHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHH
Q ss_conf 999999999999997279--5786899994578875460058888--632026877358984142035888998789999
Q gi|254781019|r 50 DIVTMAAAAALPIMQNQD--KNLIDTLFFATESSVDQSKSAAIWL--HKLLGLNSSCRVVELKQACYSATCALHMACALV 125 (396)
Q Consensus 50 d~~tmA~~Aa~~~L~~~~--~~~Id~li~~T~t~~~~~~~~a~~v--~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i 125 (396)
+..+|+++|++++|++++ ++|||.++.++. ++.....-+.+ ...+|. .+.+.+.++|.++..|+..|...|
T Consensus 23 ~~~eL~~eA~~~Al~DAGl~~~DId~~~~g~~--d~~~G~~~~~~~~~~~lg~---~p~~~~~~~~~sg~~Al~~A~~aI 97 (352)
T PRK07937 23 NGVEMLMPCFAQLYEELGITKADIGFWCSGSS--DYLAGRAFSFISAIDSIGA---VPPINESHVEMDAAWALYEAYIKI 97 (352)
T ss_pred CHHHHHHHHHHHHHHHCCCCHHHCCEEEEECC--CCCCCCCHHHHHHHHHCCC---CCCEEEECEECCHHHHHHHHHHHH
T ss_conf 99999999999999984999899978967146--5345410135777764368---774533010222999999999998
Q ss_pred HCCCCCEEEEEECCCC
Q ss_conf 7399976999503320
Q gi|254781019|r 126 AKSPERKVLIVASDVA 141 (396)
Q Consensus 126 ~sg~~~~aLVV~sD~~ 141 (396)
++|....+||++.+..
T Consensus 98 ~sG~~d~vLvvG~ek~ 113 (352)
T PRK07937 98 LTGEVDTALVYGFGKS 113 (352)
T ss_pred HCCCCCEEEEEEECCC
T ss_conf 6789998999873366
No 76
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.90 E-value=7.5e-07 Score=61.60 Aligned_cols=179 Identities=19% Similarity=0.169 Sum_probs=104.9
Q ss_pred HHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC-----------CCC----CCC---
Q ss_conf 05888863202687735898414203588899878999973999769995033201-----------458----887---
Q gi|254781019|r 87 SAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACALVAKSPERKVLIVASDVAR-----------YDL----GSS--- 148 (396)
Q Consensus 87 ~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~-----------~~~----~~~--- 148 (396)
..+..|...+|+... .+-+..||++++.||..|..+|++|....+|+.++|... ..+ +.+
T Consensus 153 ~~a~~ia~~~gl~Gp--~~tvstACASg~~AI~~A~~~Ir~G~~D~~iaGG~d~~~~~~~~~~f~~~~aLs~~~d~P~~a 230 (425)
T PRK06501 153 SIADRLADRFGTRGL--PITLSTACASGATAIQLGVEAIRRGETDRALCIATDGSVSAEALIRFSLLSALSTQNDPPEKA 230 (425)
T ss_pred HHHHHHHHHHCCCCC--CCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHCHHCCCCCCCCC
T ss_conf 999999998689998--714222627899999999999975898889993320343628888988632332078997767
Q ss_pred CC--------CCCCCCEEEEEECCCC-------CCCEEEECCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHH
Q ss_conf 53--------3478302468842687-------63035310001567865112758875423566016989999999999
Q gi|254781019|r 149 GE--------PTQGCGAVAILISSQT-------SILEIEDITGIYTNDCMDFWRPNYRRTALVDGKYSTKIYLQSLEAVW 213 (396)
Q Consensus 149 ~~--------~t~GaGA~Allv~~~~-------~~~~~~~~~~~~~~~~~df~rp~~~~~~~~dg~~~~~~y~~~~~~a~ 213 (396)
.+ +..|-||+++++++.. ++......++. +.|......|.. + .+.+.+++
T Consensus 231 ~RPFD~~RdG~v~GEGaa~lVLE~~~~A~~RGA~I~a~i~g~g~-~~d~~~~~~~~p------~--------~~~~~~~~ 295 (425)
T PRK06501 231 SKPFSKDRDGFVMAEGAGALVLESLESAVARGAKILGILAGCGE-KADSFHRTRSSP------D--------GSPAIGCV 295 (425)
T ss_pred CCCCCCCCCCEEECCCEEEEEECCHHHHHHCCCEEEEEEECCEE-CCCCCCCCCCCC------C--------HHHHHHHH
T ss_conf 67788899863535707999833377798689969999846276-478988877998------8--------69999999
Q ss_pred HHHHHHCCCCHHHCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
Q ss_conf 999996298821101233114540578888864110245441001345554333444532385432338999999
Q gi|254781019|r 214 HDYQKNKGHDFNDFQYFCYHQPFTRMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALIS 288 (396)
Q Consensus 214 ~~~l~~~g~~~~did~~v~H~p~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~s 288 (396)
++.+++.|++++||||+..|-.+.+.-+....+-...+..+. . .. .|....=..+|++-.|+=.+.+..
T Consensus 296 ~~al~~Ag~~~~~i~~i~aHgtgT~~~D~~E~~ai~~~fg~~----~-~~-~~v~s~Ks~~GH~~gaaG~~e~~~ 364 (425)
T PRK06501 296 RAALADAGLTEDQIDYINAHGTSTPENDKMEYLGLSAVFGER----L-SS-IPVSSNKSMIGHTLTAAGAVEAVF 364 (425)
T ss_pred HHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCC----C-CC-CEEECCHHHHHHHHHHHHHHHHHH
T ss_conf 999998298824513798058768676799999999986356----8-99-868895343302379999999999
No 77
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=98.89 E-value=7.8e-08 Score=67.69 Aligned_cols=97 Identities=15% Similarity=0.107 Sum_probs=79.0
Q ss_pred CCCCHHHHHHHHHHHHHHHC---CHHHCCEEEEECCCCCCC-CHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHH
Q ss_conf 98599999999999999727---957868999945788754-60058888632026877358984142035888998789
Q gi|254781019|r 47 PDEDIVTMAAAAALPIMQNQ---DKNLIDTLFFATESSVDQ-SKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMAC 122 (396)
Q Consensus 47 ~~Ed~~tmA~~Aa~~~L~~~---~~~~Id~li~~T~t~~~~-~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~ 122 (396)
.+-.+.+|++.+.+.+|++. +|++||-+|++...+... ..-.+-.+.-..|++ .++++-++..|.+++.|+.+|.
T Consensus 23 ~~~~~~~L~a~~i~~~l~r~~~l~p~~Id~Vi~G~~~~~g~~g~n~aR~aaL~aGl~-~vpa~TVnr~C~SGl~Ai~~aa 101 (405)
T PRK07851 23 VDMRPDDLAAQMVRAALDKVPALDPHDIDDLMLGCGLPGGESGFNIARVVAVLLGYD-FLPGTTVNRYCSSSLQTTRMAF 101 (405)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCCHHHCCEEEEECCCCCCCCCCCHHHHHHHHCCCC-CCCEEEECCCCCHHHHHHHHHH
T ss_conf 999999999999999998667979899898999837754643230999999973999-9863457560205799999999
Q ss_pred HHHHCCCCCEEEEEECCCCCCC
Q ss_conf 9997399976999503320145
Q gi|254781019|r 123 ALVAKSPERKVLIVASDVARYD 144 (396)
Q Consensus 123 ~~i~sg~~~~aLVV~sD~~~~~ 144 (396)
..|++|....+|+.+.|.++..
T Consensus 102 ~~I~~G~~dvvlAGGvEsMS~~ 123 (405)
T PRK07851 102 HAIKAGEGDAFISAGVETVSRF 123 (405)
T ss_pred HHHHCCCCCEEEEECCCCCCCC
T ss_conf 9997699998999681715567
No 78
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=98.89 E-value=1.5e-07 Score=65.86 Aligned_cols=261 Identities=15% Similarity=0.057 Sum_probs=143.5
Q ss_pred CC-CEEEEEEEECCCEEECHHHHHHHC--CCC---H-HH-------------HHHHCCCCEEEECCCC---------CCH
Q ss_conf 96-206688873489045599999870--999---8-79-------------7630383246655998---------599
Q gi|254781019|r 1 MA-IGIEDISFYTTNQYLDLSVIAEKY--RLD---V-AK-------------FYVGIGQERMSVLNPD---------EDI 51 (396)
Q Consensus 1 M~-vGI~~i~~y~P~~~v~~~~l~~~~--g~~---~-~k-------------~~~~lGi~~r~v~~~~---------Ed~ 51 (396)
|+ |-|++||.-.|-- .+.+++-+.. |.+ + .+ ....+|..-..+..++ ...
T Consensus 6 m~rVvITGiG~vtp~G-~~~~e~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 84 (415)
T PRK07103 6 MDEVVVTGVGVVSAIG-QGRQPFAAALLAGRHAFGVMRRPGRQLPDDPGAGPAPAFFGAEIDSLALPPMLDAHRRRASYS 84 (415)
T ss_pred CCEEEEECCEEECCCC-CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCHHH
T ss_conf 9719998886378883-899999999975998656566566646687433344565564356666300288998755299
Q ss_pred HHHHHHHHHHHHHHCCH-----HHCCEEEEECCCC---------------CCCCH---------HHHHHHHHHHCCCCCC
Q ss_conf 99999999999972795-----7868999945788---------------75460---------0588886320268773
Q gi|254781019|r 52 VTMAAAAALPIMQNQDK-----NLIDTLFFATESS---------------VDQSK---------SAAIWLHKLLGLNSSC 102 (396)
Q Consensus 52 ~tmA~~Aa~~~L~~~~~-----~~Id~li~~T~t~---------------~~~~~---------~~a~~v~~~Lgl~~~~ 102 (396)
..+++.|+..++++++. ..+++++-++... ....| ..+.+|...+|+..
T Consensus 85 ~~~a~~a~~~Al~dagl~~~~~~r~G~~vg~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~~gl~G-- 162 (415)
T PRK07103 85 AQAALAAVREAWDDAALGDVDPLRIGLVVGGSNVQQRELALVHDAYRERPAFLRPSYGLSFMDSDLCGLCTEQFGIRG-- 162 (415)
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC--
T ss_conf 999999999999967999778775289999674658999999998556998137658887510589999999968999--
Q ss_pred EEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC--------C------------CCCCCC--------CCCC
Q ss_conf 58984142035888998789999739997699950332014--------5------------888753--------3478
Q gi|254781019|r 103 RVVELKQACYSATCALHMACALVAKSPERKVLIVASDVARY--------D------------LGSSGE--------PTQG 154 (396)
Q Consensus 103 ~~~Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~--------~------------~~~~~~--------~t~G 154 (396)
+++-+..+|++++.||..|..+|++|....+|+.++|.... . +....+ +..|
T Consensus 163 p~~tv~tACaSg~~Ai~~A~~~Ir~G~~D~ai~gG~~~~ls~~~~~~f~~lgals~~~~~~~P~~~~rPFD~~rdG~v~G 242 (415)
T PRK07103 163 VAFTVGGASASGQLAVIQAARLVQSGSVDACIAVGALMDLSYWECQALRSLGAMGSDRFADEPEAACRPFDQDRDGFIYG 242 (415)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEC
T ss_conf 72010153215999999999999839999888426322205688999998677631446789876666010589964352
Q ss_pred CCEEEEEECCCC-------CCCEEEECCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHC
Q ss_conf 302468842687-------6303531000156786511275887542356601698999999999999999629882110
Q gi|254781019|r 155 CGAVAILISSQT-------SILEIEDITGIYTNDCMDFWRPNYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHDFNDF 227 (396)
Q Consensus 155 aGA~Allv~~~~-------~~~~~~~~~~~~~~~~~df~rp~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~~di 227 (396)
-||+++++++.. ++......++... |......| .-+| ...++++.++..|++++||
T Consensus 243 EGa~~lvLE~~e~A~~RGa~i~a~i~G~g~~~-Da~~~~~p------~~~g----------~~~am~~Al~~Agl~~~~I 305 (415)
T PRK07103 243 EACGAIVVERAERARRRGVRPYAKLLGWSIRL-DATRGPAP------SLDG----------EMAVIRGALRRAGLGPADI 305 (415)
T ss_pred CCEEEEEEHHHHHHHHCCCEEEEEEEEEEECC-CCCCCCCC------CHHH----------HHHHHHHHHHHCCCCCCCC
T ss_conf 76477633116668767995889983104514-78788899------7799----------9999999999829781230
Q ss_pred CEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
Q ss_conf 123311454057888886411024544100134555433344453238543233899999999
Q gi|254781019|r 228 QYFCYHQPFTRMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALISLL 290 (396)
Q Consensus 228 d~~v~H~p~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~slL 290 (396)
||+..|-...+..+.+..+-.+.+.-. .. +....=..+|++-.||=-+.|...+
T Consensus 306 dyI~aHgTgT~~~D~~E~~Al~~~fg~--------~~-~v~S~Ks~~GH~lgAaGa~e~i~~~ 359 (415)
T PRK07103 306 DYVNPHGTGSVLGDATELDALRASGLA--------HA-RINTTKSLVGHGLSAAGIVELIATL 359 (415)
T ss_pred CEEECCCCCCCCCCHHHHHHHHHHCCC--------CC-CEECCCHHHHHCHHHHHHHHHHHHH
T ss_conf 779814876767699999999997089--------98-6758644320357999999999999
No 79
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.89 E-value=3.4e-07 Score=63.75 Aligned_cols=209 Identities=14% Similarity=0.149 Sum_probs=121.1
Q ss_pred HHHHHHHHHHHHHHHCCH---HHCC----EEEEECCCCCCC-----------------CH---------HHHHHHHHHHC
Q ss_conf 999999999999972795---7868----999945788754-----------------60---------05888863202
Q gi|254781019|r 51 IVTMAAAAALPIMQNQDK---NLID----TLFFATESSVDQ-----------------SK---------SAAIWLHKLLG 97 (396)
Q Consensus 51 ~~tmA~~Aa~~~L~~~~~---~~Id----~li~~T~t~~~~-----------------~~---------~~a~~v~~~Lg 97 (396)
..-||+.|++.||++++. +.++ -|+++|..+... .| ..+..|...++
T Consensus 4 ~~~~a~~AA~eAl~dAGl~~~~~~~~~r~GV~~Gs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~ 83 (336)
T PRK09116 4 VSLMATRASELALADAGLLGDPILTDGRMGVAYGSSTGSTDPIGAFGTMLLTGSMSGITATTYVRMMPHTTAVNVGLFFG 83 (336)
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHC
T ss_conf 89999999999999659999866788888999995747689999999999718987648357765322299999999968
Q ss_pred CCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC--------------C---CCCCCC--------CC
Q ss_conf 6877358984142035888998789999739997699950332014--------------5---888753--------34
Q gi|254781019|r 98 LNSSCRVVELKQACYSATCALHMACALVAKSPERKVLIVASDVARY--------------D---LGSSGE--------PT 152 (396)
Q Consensus 98 l~~~~~~~Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~--------------~---~~~~~~--------~t 152 (396)
+... .+-+..+|++++.||..|..+|++|....+|+-++|.... . +....+ +.
T Consensus 84 l~Gp--s~tv~tACsSs~~Al~~A~~~I~~G~~d~~i~Gg~~~l~~~~~~~f~~l~~~s~~~~~p~~~~rPFD~~r~G~v 161 (336)
T PRK09116 84 LKGR--VIPTSSACTSGSQGIGYAYEAIKYGYQTLMLAGGAEELCPTEAAVFDTLFATSTKNDAPELTPRPFDANRDGLV 161 (336)
T ss_pred CCCC--CCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEE
T ss_conf 9997--51635541689999999999997599888993500026880789999999983489999877787778999547
Q ss_pred CCCCEEEEEECCC-------CCCCEEEECCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHH
Q ss_conf 7830246884268-------763035310001567865112758875423566016989999999999999996298821
Q gi|254781019|r 153 QGCGAVAILISSQ-------TSILEIEDITGIYTNDCMDFWRPNYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHDFN 225 (396)
Q Consensus 153 ~GaGA~Allv~~~-------~~~~~~~~~~~~~~~~~~df~rp~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~~ 225 (396)
.|-||+++++++. .++......++.. .|......|+ .+....+++..+++.|++++
T Consensus 162 ~gEGa~~lvLe~~~~A~~rga~i~a~i~G~~~~-~dg~~~t~P~----------------~~~~~~~~~~al~~ag~~~~ 224 (336)
T PRK09116 162 IGEGAGTLVLEELEHAKARGATIYAEIVGFGTN-SDGAHVTQPQ----------------AETMQIAMELALKDAGLAPE 224 (336)
T ss_pred ECCEEEEEEEEEHHHHHHCCCEEEEEEECEEEC-CCCCCCCCCC----------------HHHHHHHHHHHHHHCCCCCC
T ss_conf 704347999728899986799579998120660-4888898979----------------99999999999997098802
Q ss_pred HCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
Q ss_conf 10123311454057888886411024544100134555433344453238543233899999
Q gi|254781019|r 226 DFQYFCYHQPFTRMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALI 287 (396)
Q Consensus 226 did~~v~H~p~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~ 287 (396)
||+|+..|-.+....+....+-..... .+++ |....=..+|++..||=.+.+.
T Consensus 225 ~i~yI~aHgtgT~~gD~~E~~ai~~~f--------g~~~-pi~S~Ks~~GH~~gAaG~~e~i 277 (336)
T PRK09116 225 DIGYVNAHGTATDRGDIAESQATAAVF--------GARM-PISSLKSYFGHTLGACGALEAW 277 (336)
T ss_pred CEEEEEECCCCCCCCCHHHHHHHHHHH--------CCCC-CCCCCCCCCCCCHHHHHHHHHH
T ss_conf 122899537778888999999999985--------7678-8877642104417779999999
No 80
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=98.88 E-value=1.1e-06 Score=60.47 Aligned_cols=241 Identities=19% Similarity=0.101 Sum_probs=143.3
Q ss_pred HHHHHHHHHHHHHHC---CHHHCCEEEEECCCCCC-----CCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHH
Q ss_conf 999999999999727---95786899994578875-----4600588886320268773589841420358889987899
Q gi|254781019|r 52 VTMAAAAALPIMQNQ---DKNLIDTLFFATESSVD-----QSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACA 123 (396)
Q Consensus 52 ~tmA~~Aa~~~L~~~---~~~~Id~li~~T~t~~~-----~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~ 123 (396)
.-|+..|.+++|+.. ++.++.+++...+-..- ........+.+.+|+.......-+..+|.+++.||..|..
T Consensus 65 ~~la~~Al~eal~~~~~~~~~~~~l~l~l~e~~r~g~~~~~~~~~l~~l~~~~g~~~~~~s~~~~~G~as~~~al~~A~~ 144 (346)
T PRK06147 65 AAMAAPALAEALEGLPALDASEAPLLLCVAEEERPGRPAGLEERLLRSLEEELGLRFEPGSAVIARGRVSGAVALLQARR 144 (346)
T ss_pred HHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHH
T ss_conf 99999999999850786563236469983665577787510578999999872756676605652563049999999999
Q ss_pred HHHCCCCCEEEEEECCCCCCC--------------CCCCCCCCCCCCEEEEEECCCCC----CCEEEECCCCCCCCCCCC
Q ss_conf 997399976999503320145--------------88875334783024688426876----303531000156786511
Q gi|254781019|r 124 LVAKSPERKVLIVASDVARYD--------------LGSSGEPTQGCGAVAILISSQTS----ILEIEDITGIYTNDCMDF 185 (396)
Q Consensus 124 ~i~sg~~~~aLVV~sD~~~~~--------------~~~~~~~t~GaGA~Allv~~~~~----~~~~~~~~~~~~~~~~df 185 (396)
.|+.|+...+||.+.|..... .++++=+.-|-||++++++.... ...+.. .+... ..+.
T Consensus 145 ~l~~g~~~~~lv~GvDS~~~~~~l~~~~~~~rL~~~~~~~GfvpGEgAa~llL~~~~~a~~rga~i~g-~g~g~--e~a~ 221 (346)
T PRK06147 145 LIAAGGCPRVLVAGVDSLLTGPTLAHYEARERLLSSQNSNGFIPGEAAAAVLLGRPAAARAPQLPCLG-LGLGR--EPAT 221 (346)
T ss_pred HHHCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHEEEEECCCCHHHCCCCCEEE-EEEEC--CCCC
T ss_conf 98659998799998723478789999986054268999889585202047885261100147982345-66203--6653
Q ss_pred CCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCCHHHHHHH----HHHCCHHHHHHHHHHHH
Q ss_conf 27588754235660169899999999999999962988211012331145405788888----64110245441001345
Q gi|254781019|r 186 WRPNYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHDFNDFQYFCYHQPFTRMAEKAH----IRLSKIVHQNLSVAEIE 261 (396)
Q Consensus 186 ~rp~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~~did~~v~H~p~~k~~~~~~----~~l~~~~~~~~~~~~~e 261 (396)
++.. +.|. +| +.+.++++..++..+++.++++|++-|..+-..-.+-+ .|+.......
T Consensus 222 ~~~~--~~p~-~g--------~Gl~~A~~~Al~~ag~~~~~v~~~~ad~nGe~~r~~e~~~a~~R~~~~~~~~------- 283 (346)
T PRK06147 222 VESE--DLPL-RG--------DGLTQAFRAALAEAGIGLEDVGYRLADLNGEQYRFKEAALAESRLFRVPHEF------- 283 (346)
T ss_pred CCCC--CCCC-CC--------HHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCC-------
T ss_conf 3477--8998-65--------7999999999986279856777799689988442137999999752025666-------
Q ss_pred HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH-CCCCCCCCEEEEEEECC-C-CCEEEE
Q ss_conf 5543334445323854323389999999971-57436988899984079-8-303778
Q gi|254781019|r 262 KAIGITTLYNRLIGNSYTASLYIALISLLDH-SSENLAGKRVGFFSYGS-G-CVAEFF 316 (396)
Q Consensus 262 ~~~~~~~~~~~~~GN~~SASi~l~L~slLe~-~~~~~~G~rIll~syGs-G-~~a~~f 316 (396)
...+ .-...+|+++.|+-++.+.-.+.- .+...+|.++++++=.- | +.+.+.
T Consensus 284 --~~~~-~pa~~~G~~GAA~G~~~~a~a~~a~~~g~~pg~~~l~~~s~d~g~r~A~~l 338 (346)
T PRK06147 284 --PDLW-HPAECLGECGAALGPALLGVALAASRKGYGPGPPVLCHASDDDGARGAAVL 338 (346)
T ss_pred --CCCC-CHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEEEE
T ss_conf --6656-877751647889999999999999982868998679995478875269998
No 81
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=98.88 E-value=2.6e-07 Score=64.48 Aligned_cols=216 Identities=17% Similarity=0.118 Sum_probs=122.8
Q ss_pred HHHHHHHHHHHHHCCH---HHCC----EEEEECCCCCCC-----------------C-------HHHHHHHHHHHCCCCC
Q ss_conf 9999999999972795---7868----999945788754-----------------6-------0058888632026877
Q gi|254781019|r 53 TMAAAAALPIMQNQDK---NLID----TLFFATESSVDQ-----------------S-------KSAAIWLHKLLGLNSS 101 (396)
Q Consensus 53 tmA~~Aa~~~L~~~~~---~~Id----~li~~T~t~~~~-----------------~-------~~~a~~v~~~Lgl~~~ 101 (396)
-|++.|++++|++++. +.++ .++++|.++... . ...+..+...+++. .
T Consensus 74 ~~~l~aa~~Al~dAGl~~~~~~~~~r~gv~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~~~~-~ 152 (407)
T cd00828 74 LLALVATEEALADAGITDPYEVHPSEVGVVVGSGMGGLRFLRRGGKLDARAVNPYVSPKWMLSPNTVAGWVNILLLSS-H 152 (407)
T ss_pred HHHHHHHHHHHHHCCCCCHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHCCC-C
T ss_conf 999999999999679996455278766999996774388899887765540587325023014224889999985878-8
Q ss_pred CEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC--------------CCCCC---CC--------CCCCCC
Q ss_conf 358984142035888998789999739997699950332014--------------58887---53--------347830
Q gi|254781019|r 102 CRVVELKQACYSATCALHMACALVAKSPERKVLIVASDVARY--------------DLGSS---GE--------PTQGCG 156 (396)
Q Consensus 102 ~~~~Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~--------------~~~~~---~~--------~t~GaG 156 (396)
-+.+-+..+|++++.||..|..+|++|....+||.++|.... ..+.+ .+ +.-|.|
T Consensus 153 Gp~~tv~tACaSsl~Ai~~A~~~I~~G~~d~aivGg~~~~~~~~~~~f~~~~~ls~~~~~p~~~~rPFD~~rdG~v~gEG 232 (407)
T cd00828 153 GPIKTPVGACATALEALDLAVEAIRSGKADIVVVGGVEDPLEEGLSGFANMGALSTAEEEPEEMSRPFDETRDGFVEAEG 232 (407)
T ss_pred CCCCCEECHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCEEECCC
T ss_conf 98526503507999999999666236851446643122356366799987445422789988751303667898683485
Q ss_pred EEEEEECCCC-------CCCEEEECCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCE
Q ss_conf 2468842687-------630353100015678651127588754235660169899999999999999962988211012
Q gi|254781019|r 157 AVAILISSQT-------SILEIEDITGIYTNDCMDFWRPNYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHDFNDFQY 229 (396)
Q Consensus 157 A~Allv~~~~-------~~~~~~~~~~~~~~~~~df~rp~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~~did~ 229 (396)
|+++++++.. .+......++... +... . .... . ......++++.+++.+++++||+|
T Consensus 233 a~~lvLe~~~~A~~rg~~i~a~i~g~~~~~-dg~~---~-~~~~---~--------~~~~~~~~~~Al~~A~i~~~~i~y 296 (407)
T cd00828 233 AGVLVLERAELALARGAPIYGRVAGTASTT-DGAG---R-SVPA---G--------GKGIARAIRTALAKAGLSLDDLDV 296 (407)
T ss_pred CEEEEEEEHHHHHHCCCEEEEEECCEEEEC-CCCC---C-CCCC---C--------CHHHHHHHHHHHHHCCCCCCCCCE
T ss_conf 217765048667668897999643647866-8988---8-7798---6--------267899999999971999545638
Q ss_pred EEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
Q ss_conf 33114540578888864110245441001345554333444532385432338999999997
Q gi|254781019|r 230 FCYHQPFTRMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALISLLD 291 (396)
Q Consensus 230 ~v~H~p~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~slLe 291 (396)
+-.|-.+.++.+....+-......+.. +.+ +....=..+|++-.||=.+.|...+.
T Consensus 297 I~aHgtgT~~gD~~E~~Al~~~f~~~~-----~~~-~i~S~K~~~GH~~~aaG~~~li~~~l 352 (407)
T cd00828 297 ISAHGTSTPANDVAESRAIAEVAGALG-----APL-PVTAQKALFGHSKGAAGALQLIGALQ 352 (407)
T ss_pred EEEECCCCCCCCHHHHHHHHHHHHCCC-----CCC-EEECCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 995167686669999999999862137-----887-04450123031678999999999999
No 82
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.87 E-value=2.6e-07 Score=64.45 Aligned_cols=261 Identities=13% Similarity=0.129 Sum_probs=142.6
Q ss_pred CEEEEEEEECCCEEECHHHHHHHC--CCC----HHHHHHHCCCCEEEEC-CCCCC---------------HHHHHHHHHH
Q ss_conf 206688873489045599999870--999----8797630383246655-99859---------------9999999999
Q gi|254781019|r 3 IGIEDISFYTTNQYLDLSVIAEKY--RLD----VAKFYVGIGQERMSVL-NPDED---------------IVTMAAAAAL 60 (396)
Q Consensus 3 vGI~~i~~y~P~~~v~~~~l~~~~--g~~----~~k~~~~lGi~~r~v~-~~~Ed---------------~~tmA~~Aa~ 60 (396)
|-|++||.-.|.- .+.+++-+.. |.+ ..++.. .+...+... -++-| ..-|++.|+.
T Consensus 6 VaItG~g~~~p~g-~~~e~~w~~L~~G~s~i~~~~~~~~-~~~~~~~~g~i~~fd~~~~~~~~~~~~~d~~~~~~l~aa~ 83 (414)
T PRK08722 6 VVVTGMGMLSPVG-NTVESSWKALLAGQSGIVNIEHFDT-TNFSTRFAGLVKDFNCEEYMSKKDARKMDLFIQYGIAAGI 83 (414)
T ss_pred EEEECCEEECCCC-CCHHHHHHHHHCCCCCEEECCCCCC-CCCCCCEEEECCCCCHHHCCCHHHHHHCCHHHHHHHHHHH
T ss_conf 9998768689795-9999999999739983663784565-5798866577288894675899999866999999999999
Q ss_pred HHHHHCCH--H-----HCCEEEEECCCCC----------------CC-----C-----HHHHHHHHHHHCCCCCCEEEEE
Q ss_conf 99972795--7-----8689999457887----------------54-----6-----0058888632026877358984
Q gi|254781019|r 61 PIMQNQDK--N-----LIDTLFFATESSV----------------DQ-----S-----KSAAIWLHKLLGLNSSCRVVEL 107 (396)
Q Consensus 61 ~~L~~~~~--~-----~Id~li~~T~t~~----------------~~-----~-----~~~a~~v~~~Lgl~~~~~~~Di 107 (396)
++|++++. . .++ ++++|..+. .. . -..+..+...+|+... ++-+
T Consensus 84 ~Al~dAGl~~~~~~~~r~G-v~vG~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~gl~Gp--~~tv 160 (414)
T PRK08722 84 QALDDSGLEVTEENAHRIG-VAIGSGIGGLGLIEAGHKALVEKGPRKISPFFVPSTIVNMIAGHMSIMRGLRGP--NIAI 160 (414)
T ss_pred HHHHHHCCCCCCCCCCCEE-EEEEECCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC--CCCC
T ss_conf 9999628994324656447-999405671777999999998548654584222245778999999998399898--7253
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC-----------C----CCC---CC--------CCCCCCEEEEE
Q ss_conf 1420358889987899997399976999503320145-----------8----887---53--------34783024688
Q gi|254781019|r 108 KQACYSATCALHMACALVAKSPERKVLIVASDVARYD-----------L----GSS---GE--------PTQGCGAVAIL 161 (396)
Q Consensus 108 ~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~-----------~----~~~---~~--------~t~GaGA~All 161 (396)
..+|++++.||..|..+|++|....+||.++|..... + +.+ .+ +..|-||++++
T Consensus 161 ~tACsS~l~Ai~~A~~~I~~G~~d~aivGG~~~~~~p~~~~~f~~~~~ls~~~~~p~~~~rPFD~~rdG~v~gEGa~~~v 240 (414)
T PRK08722 161 STACTTGLHNIGHAARMIAYGDADAMLAGGAEKASTPLGMGGFGAAKALSTRNDEPQKASRPWDKDRDGFVLGDGAGMMV 240 (414)
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCEEEE
T ss_conf 55407899999999999867985744327732203828899988653120258996546566557999835306421898
Q ss_pred ECCC-------CCCCEEEECCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECC
Q ss_conf 4268-------763035310001567865112758875423566016989999999999999996298821101233114
Q gi|254781019|r 162 ISSQ-------TSILEIEDITGIYTNDCMDFWRPNYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHDFNDFQYFCYHQ 234 (396)
Q Consensus 162 v~~~-------~~~~~~~~~~~~~~~~~~df~rp~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~~did~~v~H~ 234 (396)
+++. .++......++. ..|......|. -+| .....+++..+++.|++++||||+..|-
T Consensus 241 Le~~~~A~~rGa~i~a~i~G~g~-~~d~~~~~~p~------p~g--------~~~~~~m~~al~~agi~~~~I~yI~aHG 305 (414)
T PRK08722 241 LEEYEHAKARGAKIYAELVGFGM-SGDAYHMTSPS------EDG--------SGGALAMEAAMRDAGITGEQIGYVNAHG 305 (414)
T ss_pred EEEHHHHHHCCCCCEEEEEEEEE-CCCCCCCCCCC------CCH--------HHHHHHHHHHHHHCCCCHHHCCEEEEEC
T ss_conf 70088898679974399987875-36888886679------757--------9999999999987499987886698635
Q ss_pred CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
Q ss_conf 540578888864110245441001345554333444532385432338999999
Q gi|254781019|r 235 PFTRMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALIS 288 (396)
Q Consensus 235 p~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~s 288 (396)
.+..+.+....+-....-.+... +.+ +....=..+|++.+||=.+.|..
T Consensus 306 TgT~~gD~~E~~ai~~~fg~~~~----~~~-~v~S~Ks~iGH~~~AaG~~~~i~ 354 (414)
T PRK08722 306 TSTPAGDVAEIKGIKRALGEAGS----KQV-LVSSTKSMTGHLLGAAGSVEAII 354 (414)
T ss_pred CCCCCCCHHHHHHHHHHHCCCCC----CCC-CCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 87877599999999999663578----975-21470033022378889999999
No 83
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=98.86 E-value=6.1e-07 Score=62.17 Aligned_cols=143 Identities=19% Similarity=0.185 Sum_probs=91.1
Q ss_pred HHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC----C-------CCCCC-----
Q ss_conf 0588886320268773589841420358889987899997399976999503320145----8-------88753-----
Q gi|254781019|r 87 SAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACALVAKSPERKVLIVASDVARYD----L-------GSSGE----- 150 (396)
Q Consensus 87 ~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~----~-------~~~~~----- 150 (396)
+.+..|...+|+.. +++-+..||.++..||..|..+|++|....+||.++|..... + ....+
T Consensus 138 ~~a~~Ia~~~gl~G--p~~t~~~ACaSg~~Ai~~A~~~I~~G~~d~~i~Gg~d~l~~~~~~~f~~~~~ls~~~~rPFd~~ 215 (395)
T PRK09185 138 SPADFLRAYLGLSG--PAYTISTACSSSAKVFASARRLLEAGLCDAVIVGGVDSLCRLTLNGFNSLESLSPGPCQPFSAN 215 (395)
T ss_pred HHHHHHHHHHCCCC--CCEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 49999999968989--6320014460899999999999985998889980212245520578776422466788765579
Q ss_pred ---CCCCCCEEEEEECCCCCC--CEEEECCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHH
Q ss_conf ---347830246884268763--035310001567865112758875423566016989999999999999996298821
Q gi|254781019|r 151 ---PTQGCGAVAILISSQTSI--LEIEDITGIYTNDCMDFWRPNYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHDFN 225 (396)
Q Consensus 151 ---~t~GaGA~Allv~~~~~~--~~~~~~~~~~~~~~~df~rp~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~~ 225 (396)
+..|-||+++++++...- ......++.. .|....-.| .| +| +....++++.+++.+++++
T Consensus 216 r~G~v~gEGa~~~vLE~~~~a~~~~~~~G~~~~-~da~~~~~p----~p--~g--------~g~~~am~~Al~~a~~~~~ 280 (395)
T PRK09185 216 RDGINIGEAAAFFLLRPATRDDAAVLLLGVGES-SDAHHMSAP----HP--EG--------LGARLAMQAALADAGLEAA 280 (395)
T ss_pred CCCEEEECEEEEEEECHHHCCCCCEEEEEEEEC-CCCCCCCCC----CC--CH--------HHHHHHHHHHHHHCCCCCC
T ss_conf 997365056899997455629997899998851-677777788----98--88--------9999999999997399934
Q ss_pred HCCEEEECCCCCHHHHHHHHH
Q ss_conf 101233114540578888864
Q gi|254781019|r 226 DFQYFCYHQPFTRMAEKAHIR 246 (396)
Q Consensus 226 did~~v~H~p~~k~~~~~~~~ 246 (396)
||||+..|-.+.+..+....+
T Consensus 281 di~yv~aHgtgT~~~D~~E~~ 301 (395)
T PRK09185 281 DIGYINLHGTATPLNDAMESR 301 (395)
T ss_pred CCCEEEEECCCCCCCCHHHHH
T ss_conf 366699616768665899999
No 84
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.85 E-value=4.1e-07 Score=63.25 Aligned_cols=210 Identities=15% Similarity=0.061 Sum_probs=119.2
Q ss_pred HHHHHHHHHHHHHCC-----HHHCCEEEEECCCCCC----------------C-C---------HHHHHHHHHHHCCCCC
Q ss_conf 999999999997279-----5786899994578875----------------4-6---------0058888632026877
Q gi|254781019|r 53 TMAAAAALPIMQNQD-----KNLIDTLFFATESSVD----------------Q-S---------KSAAIWLHKLLGLNSS 101 (396)
Q Consensus 53 tmA~~Aa~~~L~~~~-----~~~Id~li~~T~t~~~----------------~-~---------~~~a~~v~~~Lgl~~~ 101 (396)
.++..+++.++++++ ++.++. +++|..+.. . . ...+..+...+++..
T Consensus 85 ~~~~~~~~~a~edaG~~~~~~~r~gv-~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~~~~G- 162 (418)
T PRK07910 85 RMSTVLGRRVWENAGSPEVDTNRLMV-SIGTGLGSAEELVFSYDDMRARGLRAVSPLAVQMYMPNGPAAAVGLERHAKA- 162 (418)
T ss_pred HHHHHHHHHHHHHCCCCCCCHHHCEE-EEEEECCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC-
T ss_conf 99999999999977999888225017-9887315558899999999854856558778999866379999999828978-
Q ss_pred CEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC-----------C-----CCC---CC--------CCCC
Q ss_conf 3589841420358889987899997399976999503320145-----------8-----887---53--------3478
Q gi|254781019|r 102 CRVVELKQACYSATCALHMACALVAKSPERKVLIVASDVARYD-----------L-----GSS---GE--------PTQG 154 (396)
Q Consensus 102 ~~~~Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~-----------~-----~~~---~~--------~t~G 154 (396)
+++-+..||++++.||..|..+|++|....+|+-++|..... . +++ .+ +..|
T Consensus 163 -p~~t~~tACsSs~~Ai~~A~~~I~~G~~d~ai~GG~~~~l~~~~~~~f~~l~~~~s~~~~~p~~~~rPFD~~rdG~v~g 241 (418)
T PRK07910 163 -GVITPVSACASGSEAIAQAWRQIVLGEADIAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFDKDRDGFVFG 241 (418)
T ss_pred -CCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEC
T ss_conf -8555305323488999999999980998889954522126817789999977774458899887768655678986404
Q ss_pred CCEEEEEECCCC-------CCCEEEECCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHC
Q ss_conf 302468842687-------6303531000156786511275887542356601698999999999999999629882110
Q gi|254781019|r 155 CGAVAILISSQT-------SILEIEDITGIYTNDCMDFWRPNYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHDFNDF 227 (396)
Q Consensus 155 aGA~Allv~~~~-------~~~~~~~~~~~~~~~~~df~rp~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~~di 227 (396)
-||+++++.+.. .+......++.. .|...+..|.. +| +...+++++.+++.|++++||
T Consensus 242 EGag~lvLe~l~~A~~rGa~I~a~i~G~g~~-~Dg~~~~~p~p------~g--------~~~~~am~~Al~~agl~p~~I 306 (418)
T PRK07910 242 EGGALMVIETEEHAKARGANILARIMGASIT-SDGYHMVAPDP------NG--------ERAGHAMTRAIQLAGLTPTDI 306 (418)
T ss_pred CCEEEEEEECHHHHHHCCCEEEEEEEEEEEC-CCCCCCCCCCC------CC--------HHHHHHHHHHHHHHCCCCCCC
T ss_conf 8248888502545663698578998513645-88888757899------80--------789999999999828995340
Q ss_pred CEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
Q ss_conf 1233114540578888864110245441001345554333444532385432338999999
Q gi|254781019|r 228 QYFCYHQPFTRMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALIS 288 (396)
Q Consensus 228 d~~v~H~p~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~s 288 (396)
||+..|-.+.+..+....+-....-.. ...+....=..+|++-+||=-+.+..
T Consensus 307 dyI~aHGTgT~~gD~~E~~Ai~~vfg~--------~~~~v~S~Ks~iGH~~~AaG~~e~i~ 359 (418)
T PRK07910 307 DHVNAHATGTSVGDVAEGRAINNALGG--------HRPAVYAPKSALGHSVGAVGAVESIL 359 (418)
T ss_pred CEEEECCCCCCCCCHHHHHHHHHHHCC--------CCCCEECCHHHHHCCHHHHHHHHHHH
T ss_conf 779956777876699999999998669--------99841281243420389999999999
No 85
>PRK08768 consensus
Probab=98.85 E-value=6e-07 Score=62.22 Aligned_cols=266 Identities=12% Similarity=0.130 Sum_probs=142.8
Q ss_pred CC--CEEEEEEEECCCEEECHHHHHHHC--CC---------CHHHHHHHCC--C---CEEEECCCCC----C-HHHHHHH
Q ss_conf 96--206688873489045599999870--99---------9879763038--3---2466559985----9-9999999
Q gi|254781019|r 1 MA--IGIEDISFYTTNQYLDLSVIAEKY--RL---------DVAKFYVGIG--Q---ERMSVLNPDE----D-IVTMAAA 57 (396)
Q Consensus 1 M~--vGI~~i~~y~P~~~v~~~~l~~~~--g~---------~~~k~~~~lG--i---~~r~v~~~~E----d-~~tmA~~ 57 (396)
|+ |-|++||.-.|-- .+.+++-+.. |. +...+...++ + ....+..+.| | ..-+++.
T Consensus 1 M~rrVvITGmG~vtp~G-~~~~~~w~~L~~G~s~i~~~~~~d~~~~~~~~~g~i~~fd~~~~~~~~~~~~~d~~~~~~l~ 79 (411)
T PRK08768 1 MSRRVVVTGMGMVSPLG-NDLATSWDGIVHGRSGIGPITQIDASQFTTKIAGEIKNFDPTLFVSAKDVKKMDSFIHYGVG 79 (411)
T ss_pred CCCCEEEECCEEECCCC-CCHHHHHHHHHCCCCCEECCCCCCCCCCCCCEEEECCCCCHHHCCCHHHHHHCCHHHHHHHH
T ss_conf 98989998767789796-99999999998089855407756631487776554588792554899999756999999999
Q ss_pred HHHHHHHHCC--HHHCC----EEEEECCCCCCCC--------------------------HHHHHHHHHHHCCCCCCEEE
Q ss_conf 9999997279--57868----9999457887546--------------------------00588886320268773589
Q gi|254781019|r 58 AALPIMQNQD--KNLID----TLFFATESSVDQS--------------------------KSAAIWLHKLLGLNSSCRVV 105 (396)
Q Consensus 58 Aa~~~L~~~~--~~~Id----~li~~T~t~~~~~--------------------------~~~a~~v~~~Lgl~~~~~~~ 105 (396)
|+.++|++++ +++++ -++++|.++.... -..+..|...+++.. +++
T Consensus 80 aa~~Al~dAGl~~~~~~~~r~Gv~vGt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~g~~G--p~~ 157 (411)
T PRK08768 80 ASFMALDDSGLEINESNAERVGAILGSGIGGLLGIEEQTIKFHEGGARKISPFYVPSTIINMLPGQVSLIKGLKG--PTF 157 (411)
T ss_pred HHHHHHHHHCCCHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC--CCC
T ss_conf 999997741899001476552799922666530278999999856855468225566676689999999819989--762
Q ss_pred EECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC-----------C----CCC---CC--------CCCCCCEEE
Q ss_conf 841420358889987899997399976999503320145-----------8----887---53--------347830246
Q gi|254781019|r 106 ELKQACYSATCALHMACALVAKSPERKVLIVASDVARYD-----------L----GSS---GE--------PTQGCGAVA 159 (396)
Q Consensus 106 Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~-----------~----~~~---~~--------~t~GaGA~A 159 (396)
-+..+|++++.||..|..+|++|....+|+.++|..... + +++ .+ +..|-||++
T Consensus 158 tv~taCaS~l~Al~~A~~~i~~G~~d~~ivgg~~~~~~p~~~~~f~~l~~ls~~~~~P~~~~rPFd~~rdG~v~gEGa~~ 237 (411)
T PRK08768 158 SAVSACATSNHSIGTAMRMIQHGDADVMLAGGAERGSSPSSVGGFCAMKAMSTRNDDPTGASRPWDKQRDGFVLGDGAGV 237 (411)
T ss_pred CCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCEEEE
T ss_conf 53541137889999999998678867455264202158788999998654520378988766666579998686680489
Q ss_pred EEECCC-------CCCCEEEECCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEE
Q ss_conf 884268-------7630353100015678651127588754235660169899999999999999962988211012331
Q gi|254781019|r 160 ILISSQ-------TSILEIEDITGIYTNDCMDFWRPNYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHDFNDFQYFCY 232 (396)
Q Consensus 160 llv~~~-------~~~~~~~~~~~~~~~~~~df~rp~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~~did~~v~ 232 (396)
+++.+. ..+......++... |......|. -++ .....+++..+++.+++++||||+..
T Consensus 238 ~vLe~~e~A~~rga~i~a~i~g~~~~~-d~~~~~~p~------~~~--------~~~~~~~~~al~~a~~~~~~i~yi~a 302 (411)
T PRK08768 238 LVLEEYEHAKARGARIYAELVGFGASS-DAFHMTAPS------EDG--------EGAARSMAAAMRDAKLNPEQIGYLNA 302 (411)
T ss_pred EEECCHHHHHHCCCCEEEEEEEEEECC-CCCCCCCCC------CCH--------HHHHHHHHHHHHHCCCCCCCEEEEEE
T ss_conf 997148889867990789997787614-788887889------777--------99999999999976989310248996
Q ss_pred CCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
Q ss_conf 1454057888886411024544100134555433344453238543233899999999
Q gi|254781019|r 233 HQPFTRMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALISLL 290 (396)
Q Consensus 233 H~p~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~slL 290 (396)
|-...++.+....+-....-.+.. .+ + +....=..+|++..||=.+.|...+
T Consensus 303 HgtgT~~~D~~E~~ai~~~fg~~~---~~--~-~i~s~Ks~~GH~~~aaG~~~~~~~~ 354 (411)
T PRK08768 303 HGTSTPLGDLAETMAMKRALGDHA---YK--T-MVSSTKSMTGHLLGAAGGVEAIFSV 354 (411)
T ss_pred ECCCCCCCCHHHHHHHHHHHCCCC---CC--C-EEECHHHHHHHHHHHHHHHHHHHHH
T ss_conf 756675539999999999856789---98--7-4789445543208999999999999
No 86
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=98.83 E-value=5.5e-06 Score=56.21 Aligned_cols=99 Identities=16% Similarity=0.107 Sum_probs=80.4
Q ss_pred CCCCHHHHHHHHHHHHHHHC---CHHHCCEEEEECCCCCC-CCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHH
Q ss_conf 98599999999999999727---95786899994578875-460058888632026877358984142035888998789
Q gi|254781019|r 47 PDEDIVTMAAAAALPIMQNQ---DKNLIDTLFFATESSVD-QSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMAC 122 (396)
Q Consensus 47 ~~Ed~~tmA~~Aa~~~L~~~---~~~~Id~li~~T~t~~~-~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~ 122 (396)
.+..+.+|++.+++.+|++. +|++||-++++...+.- ...-.+-+..=.-|++.+++++-++..|.+++.|+.+|.
T Consensus 27 ~~~~~~~L~a~~i~~~l~r~~~l~~~~Id~vi~G~~~~~~~~g~n~aR~aal~aGlp~~vp~~tVnr~C~SGl~Ai~~Aa 106 (399)
T PRK09052 27 KNTRPDDLLAHVLRAAVAQVPGLDPKLIEDAIVGCAMPEAEQGLNVARIGALLAGLPNSVGGVTVNRFCASGLQAVAMAA 106 (399)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCCHHHCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHHH
T ss_conf 88998999999999999865797989989799970644565566899999997599988871578651336899999999
Q ss_pred HHHHCCCCCEEEEEECCCCCCCC
Q ss_conf 99973999769995033201458
Q gi|254781019|r 123 ALVAKSPERKVLIVASDVARYDL 145 (396)
Q Consensus 123 ~~i~sg~~~~aLVV~sD~~~~~~ 145 (396)
..|++|....+|+.+.|.++..+
T Consensus 107 ~~I~~G~~dvviaGG~EsMS~~P 129 (399)
T PRK09052 107 DRIRVGEADVMIAAGVESMSMVP 129 (399)
T ss_pred HHHHCCCCCEEEECCCCCCCCCC
T ss_conf 99868998889861520246686
No 87
>PRK06845 consensus
Probab=98.83 E-value=7.6e-08 Score=67.76 Aligned_cols=98 Identities=16% Similarity=0.139 Sum_probs=83.2
Q ss_pred CCCCHHHHHHHHHHHHHHHC--CHHHCCEEEEECCCCCCC-CHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHH
Q ss_conf 98599999999999999727--957868999945788754-600588886320268773589841420358889987899
Q gi|254781019|r 47 PDEDIVTMAAAAALPIMQNQ--DKNLIDTLFFATESSVDQ-SKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACA 123 (396)
Q Consensus 47 ~~Ed~~tmA~~Aa~~~L~~~--~~~~Id~li~~T~t~~~~-~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~ 123 (396)
.+..+.+|++.|++.+|++. +|++||-++++...+... ....+-.+.-..|++..++++.++.+|.++..|+.+|..
T Consensus 22 ~~~~~~~L~~~a~~~al~~~gi~~~~Id~vi~G~~~~~g~~~~~~aR~~aL~aGlp~~vp~~tV~~~CaSG~~Ai~~A~~ 101 (392)
T PRK06845 22 KDLSATDLGVAAAKAALEQAGVSPEDIGHVVFGNVIQTGKDAIYLARHIGLKAGLPVGVPALTVNRLCGSGFEAIIQAAK 101 (392)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHH
T ss_conf 88999999999999999871979899798999815645654334999999976999888748884430388999999999
Q ss_pred HHHCCCCCEEEEEECCCCCCC
Q ss_conf 997399976999503320145
Q gi|254781019|r 124 LVAKSPERKVLIVASDVARYD 144 (396)
Q Consensus 124 ~i~sg~~~~aLVV~sD~~~~~ 144 (396)
.|++|....+|+++.|.++..
T Consensus 102 ~I~sG~~dvvlagGvEsmS~~ 122 (392)
T PRK06845 102 LIYLGEAEAVLAGGVESMSQA 122 (392)
T ss_pred HHHCCCCCEEEECCEECCCCC
T ss_conf 985799767886255205554
No 88
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=98.82 E-value=9.2e-07 Score=61.05 Aligned_cols=211 Identities=12% Similarity=0.016 Sum_probs=118.4
Q ss_pred HHHHHHHHHHHHHHHCC--HHHCC----EEEEECCCCCCCC----------------H----------HHHHHHHHHHCC
Q ss_conf 99999999999997279--57868----9999457887546----------------0----------058888632026
Q gi|254781019|r 51 IVTMAAAAALPIMQNQD--KNLID----TLFFATESSVDQS----------------K----------SAAIWLHKLLGL 98 (396)
Q Consensus 51 ~~tmA~~Aa~~~L~~~~--~~~Id----~li~~T~t~~~~~----------------~----------~~a~~v~~~Lgl 98 (396)
..-|++.|++++|++++ +++++ .++++|.++.... . ..+..+...+++
T Consensus 71 ~~~~~l~aa~~Al~dAGl~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~is~~~gl 150 (399)
T cd00832 71 MTRLALAAADWALADAGVDPAALPPYDMGVVTASAAGGFEFGQRELQKLWSKGPRHVSAYQSFAWFYAVNTGQISIRHGM 150 (399)
T ss_pred HHHHHHHHHHHHHHHCCCCHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999999888609984564877428999425676025589999997418542561121356677888899998289
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC--------------CCCCC---C--------CCC
Q ss_conf 8773589841420358889987899997399976999503320145--------------88875---3--------347
Q gi|254781019|r 99 NSSCRVVELKQACYSATCALHMACALVAKSPERKVLIVASDVARYD--------------LGSSG---E--------PTQ 153 (396)
Q Consensus 99 ~~~~~~~Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~--------------~~~~~---~--------~t~ 153 (396)
... ++-+..+|++++.|+..|..+|++| ...+++.++|..... .+.+. + +..
T Consensus 151 ~Gp--~~tv~tacsssl~Ai~~A~~~i~~G-~d~~i~Gg~~~~l~p~~~~~~~~~g~ls~~~~p~~~~rPFD~~r~G~v~ 227 (399)
T cd00832 151 RGP--SGVVVAEQAGGLDALAQARRLVRRG-TPLVVSGGVDSALCPWGWVAQLSSGRLSTSDDPARAYLPFDAAAAGYVP 227 (399)
T ss_pred CCC--CCCHHCCCCHHHHHHHHHHHHHHCC-CCHHHCCCCCEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEE
T ss_conf 887--4102114707999999999998769-7201217740451628899998756645699998650477678980664
Q ss_pred CCCEEEEEECCC-------CCCCEEEECCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHH
Q ss_conf 830246884268-------7630353100015678651127588754235660169899999999999999962988211
Q gi|254781019|r 154 GCGAVAILISSQ-------TSILEIEDITGIYTNDCMDFWRPNYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHDFND 226 (396)
Q Consensus 154 GaGA~Allv~~~-------~~~~~~~~~~~~~~~~~~df~rp~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~~d 226 (396)
|-||+++++++. +.+......++... |-..+ .+ . -+.+.+++++.+++.|++++|
T Consensus 228 GEGa~~lvLe~~~~A~~rGa~i~a~i~G~~~~~----d~~~~----~~--~--------~~~~~~a~~~Al~~agi~p~~ 289 (399)
T cd00832 228 GEGGAILVLEDAAAARERGARVYGEIAGYAATF----DPPPG----SG--R--------PPGLARAIRLALADAGLTPED 289 (399)
T ss_pred CCCEEEEEECCHHHHHHCCCEEEEEEEEEEECC----CCCCC----CC--C--------HHHHHHHHHHHHHHHCCCCCE
T ss_conf 276678884549889878895999998889848----99899----98--9--------799999999999971999670
Q ss_pred CCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
Q ss_conf 0123311454057888886411024544100134555433344453238543233899999999
Q gi|254781019|r 227 FQYFCYHQPFTRMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALISLL 290 (396)
Q Consensus 227 id~~v~H~p~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~slL 290 (396)
|||+..|-.+..+.+....+-....-.. ..+ +....=..+|++..||=.+.|...+
T Consensus 290 I~yI~aHgTGT~~gD~~E~~Ai~~~fg~-------~~~-pv~S~K~~iGH~~~AaG~~~~i~~l 345 (399)
T cd00832 290 VDVVFADAAGVPELDRAEAAALAAVFGP-------RGV-PVTAPKTMTGRLYAGGAPLDVATAL 345 (399)
T ss_pred EEEEEEECCCCCCCCHHHHHHHHHHHCC-------CCC-CCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 5699983375855699999999999669-------998-7899542211069999999999999
No 89
>PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=98.79 E-value=3.3e-06 Score=57.57 Aligned_cols=255 Identities=12% Similarity=0.105 Sum_probs=134.9
Q ss_pred CC-CEEEEEEEECCCEEECHHHHHHHC--CCC---H-HHHHHHCCCCEEEECCCC---------------CCHHHHHHHH
Q ss_conf 96-206688873489045599999870--999---8-797630383246655998---------------5999999999
Q gi|254781019|r 1 MA-IGIEDISFYTTNQYLDLSVIAEKY--RLD---V-AKFYVGIGQERMSVLNPD---------------EDIVTMAAAA 58 (396)
Q Consensus 1 M~-vGI~~i~~y~P~~~v~~~~l~~~~--g~~---~-~k~~~~lGi~~r~v~~~~---------------Ed~~tmA~~A 58 (396)
|+ |-|++||.-.|-- .+.+++-+.. |.+ . ..+. ..+...+....++ .+...+++.|
T Consensus 1 mrrVvITG~G~vsp~G-~~~~e~w~~L~~G~sgi~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~r~~~~~~~~a~~A 78 (406)
T PRK07967 1 MRRVVITGLGIVSSIG-NNQQEVLASLREGRSGITFSQEFA-ELGMRSQVWGNVKLDPEELIDRKVMRFMGDAAAYAYLA 78 (406)
T ss_pred CCEEEEECCEEECCCC-CCHHHHHHHHHCCCCCEEECCCCC-CCCCCCCEEEECCCCHHHCCCHHHHHCCCHHHHHHHHH
T ss_conf 9719998543789882-999999999981999766688544-45997616775688936608988870279999999999
Q ss_pred HHHHHHHCC--HHHCC----EEEEECCCCCC-----------------CC-H---------HHHHHHHHHHCCCCCCEEE
Q ss_conf 999997279--57868----99994578875-----------------46-0---------0588886320268773589
Q gi|254781019|r 59 ALPIMQNQD--KNLID----TLFFATESSVD-----------------QS-K---------SAAIWLHKLLGLNSSCRVV 105 (396)
Q Consensus 59 a~~~L~~~~--~~~Id----~li~~T~t~~~-----------------~~-~---------~~a~~v~~~Lgl~~~~~~~ 105 (396)
+++||++++ +++++ .|+++|..+.. .. | ..+..+...+++.. +++
T Consensus 79 a~eAl~dAGl~~~~~~~~r~Gv~~Gs~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~a~~is~~~~l~G--p~~ 156 (406)
T PRK07967 79 MEQAIADAGLSEDQVSNPRTGLIAGSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTVSACLATPFKIKG--VNY 156 (406)
T ss_pred HHHHHHHCCCCHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC--CCC
T ss_conf 999999759982455856548999278731888999999987418976228348998866689999999848999--753
Q ss_pred EECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC------------------CCCCCC--------CCCCCCEEE
Q ss_conf 841420358889987899997399976999503320145------------------888753--------347830246
Q gi|254781019|r 106 ELKQACYSATCALHMACALVAKSPERKVLIVASDVARYD------------------LGSSGE--------PTQGCGAVA 159 (396)
Q Consensus 106 Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~------------------~~~~~~--------~t~GaGA~A 159 (396)
-+..+|++++.||..|..+|++|....+|+.++|..... +....+ +..|-||++
T Consensus 157 tv~~aCas~~~Ai~~A~~~i~~G~~d~~i~GG~d~~~~~~~~~~~~~~~l~~~~~~~P~~~~rPFd~~r~G~v~gEGa~~ 236 (406)
T PRK07967 157 SISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELDWEMSCLFDAMGALSTKYNDTPEKASRAYDANRDGFVIAGGGGV 236 (406)
T ss_pred CCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEE
T ss_conf 54542127889999999999769978777144023575134467777777622477987675666688998414775799
Q ss_pred EEECCCC-------CCCEEEECCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEE
Q ss_conf 8842687-------630353100015678651127588754235660169899999999999999962988211012331
Q gi|254781019|r 160 ILISSQT-------SILEIEDITGIYTNDCMDFWRPNYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHDFNDFQYFCY 232 (396)
Q Consensus 160 llv~~~~-------~~~~~~~~~~~~~~~~~df~rp~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~~did~~v~ 232 (396)
+++++.. .+......++. +.|.++..-|. + +. ...+++..++..+ .||||+..
T Consensus 237 lvLE~~e~A~~rGa~i~a~i~g~g~-~~d~~~~~~p~--------~----~g----~~~~~~~al~~~~---~~idyi~a 296 (406)
T PRK07967 237 VVVEELEHALARGAKIYAEIVGYGA-TSDGYDMVAPS--------G----EG----AVRCMQMALATVD---TPIDYINP 296 (406)
T ss_pred EEEHHHHHHHHCCCEEEEEEECCEE-CCCCCCCCCCC--------H----HH----HHHHHHHHHHCCC---CCCCEEEE
T ss_conf 8610168898689978999935343-15898887987--------8----99----9999999982644---34658995
Q ss_pred CCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
Q ss_conf 1454057888886411024544100134555433344453238543233899999
Q gi|254781019|r 233 HQPFTRMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALI 287 (396)
Q Consensus 233 H~p~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~ 287 (396)
|-......+.....-...... +...+....=..+|++-.||=.+.+.
T Consensus 297 Hgtgt~~~D~~E~~Ai~~~fg--------~~~~~v~s~K~~~GH~~~aaGa~e~i 343 (406)
T PRK07967 297 HGTSTPVGDVKELGAIREVFG--------DKCPAISATKSLTGHSLGAAGVQEAI 343 (406)
T ss_pred ECCCCCCCCHHHHHHHHHHHC--------CCCCCEECCCCCCCCCHHHHHHHHHH
T ss_conf 457687889999999999867--------78983016656545651767999999
No 90
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=98.78 E-value=1.1e-06 Score=60.54 Aligned_cols=218 Identities=16% Similarity=0.172 Sum_probs=124.9
Q ss_pred HHHHHHHHHHHHHCC--HHHCC----EEEEECCCCCCC-------------------CHHHHHHHHHHHCCCCCCEEEEE
Q ss_conf 999999999997279--57868----999945788754-------------------60058888632026877358984
Q gi|254781019|r 53 TMAAAAALPIMQNQD--KNLID----TLFFATESSVDQ-------------------SKSAAIWLHKLLGLNSSCRVVEL 107 (396)
Q Consensus 53 tmA~~Aa~~~L~~~~--~~~Id----~li~~T~t~~~~-------------------~~~~a~~v~~~Lgl~~~~~~~Di 107 (396)
-|++++++++|++++ +++++ .+++++.+..+. .-..+..|...+++... ++-+
T Consensus 89 rl~L~~a~eAl~dAG~~~~~~~~~r~GV~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~~~Gp--~~~v 166 (421)
T cd00833 89 RLLLEVAWEALEDAGYSPESLAGSRTGVFVGASSSDYLELLARDPDEIDAYAATGTSRAFLANRISYFFDLRGP--SLTV 166 (421)
T ss_pred HHHHHHHHHHHHHCCCCHHHCCCCCEEEEECCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC--CCCC
T ss_conf 99999999999752898346488634999666666478897427565785301354311799999999689996--0033
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC--------CCC--CC-----------CCCCCCCCEEEEEECCCC
Q ss_conf 142035888998789999739997699950332014--------588--87-----------533478302468842687
Q gi|254781019|r 108 KQACYSATCALHMACALVAKSPERKVLIVASDVARY--------DLG--SS-----------GEPTQGCGAVAILISSQT 166 (396)
Q Consensus 108 ~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~--------~~~--~~-----------~~~t~GaGA~Allv~~~~ 166 (396)
..||++++.||..|..+|++|....+|+-++|.... ..+ ++ +=+..|.||+++++.+..
T Consensus 167 ~tACaSsl~Ai~~A~~~i~~G~~d~ai~Gg~~~~~~~~~~~~~~~~~~ls~~~~~rpFD~~~~G~v~gEGa~~lvLe~~~ 246 (421)
T cd00833 167 DTACSSSLVALHLACQSLRSGECDLALVGGVNLILSPDMFVGFSKAGMLSPDGRCRPFDADADGYVRGEGVGVVVLKRLS 246 (421)
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCCEEEECEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHH
T ss_conf 53627999999999999857994354412000315868999986357868999856788899986555751354368789
Q ss_pred -------CCCEEEECCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCCHH
Q ss_conf -------6303531000156786511275887542356601698999999999999999629882110123311454057
Q gi|254781019|r 167 -------SILEIEDITGIYTNDCMDFWRPNYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHDFNDFQYFCYHQPFTRM 239 (396)
Q Consensus 167 -------~~~~~~~~~~~~~~~~~df~rp~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~~did~~v~H~p~~k~ 239 (396)
++.......+... |.... ....| + .+....++++.+++.|++++||+|+-.|-.+..+
T Consensus 247 ~A~~~g~~I~a~i~G~g~~~----dg~~~-~~~~P--~--------~~~~~~~~~~al~~agi~~~~i~yieaHgtgT~~ 311 (421)
T cd00833 247 DALRDGDRIYAVIRGSAVNQ----DGRTK-GITAP--S--------GEAQAALIRRAYARAGVDPSDIDYVEAHGTGTPL 311 (421)
T ss_pred HHHHCCCCEEEEEEEEEECC----CCCCC-CCCCC--C--------HHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCC
T ss_conf 99876994799998999806----89777-88887--5--------6689999999999729994412089974476866
Q ss_pred HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
Q ss_conf 888886411024544100134555433344453238543233899999999
Q gi|254781019|r 240 AEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALISLL 290 (396)
Q Consensus 240 ~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~slL 290 (396)
.+.....-....-.... ....++ +....-..+|++-+|+=.+.|...+
T Consensus 312 gD~~E~~ai~~~f~~~~--~~~~~~-~v~S~Ks~~GH~~~AaG~~~~i~~~ 359 (421)
T cd00833 312 GDPIEVEALAKVFGGSR--SADQPL-LIGSVKSNIGHLEAAAGLAGLIKVV 359 (421)
T ss_pred CCHHHHHHHHHHHCCCC--CCCCCC-CCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 69999999999961257--777863-0235434534335767999999999
No 91
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=98.77 E-value=3.9e-07 Score=63.33 Aligned_cols=99 Identities=14% Similarity=0.101 Sum_probs=84.4
Q ss_pred CCCCHHHHHHHHHHHHHHHC--CHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHH
Q ss_conf 98599999999999999727--9578689999457887546005888863202687735898414203588899878999
Q gi|254781019|r 47 PDEDIVTMAAAAALPIMQNQ--DKNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACAL 124 (396)
Q Consensus 47 ~~Ed~~tmA~~Aa~~~L~~~--~~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~ 124 (396)
.+-.+.+|+..+.+.+|++. +|++||-||++...+.-..+..+-++.-..|++.+++++-++..|.+++.|+.+|...
T Consensus 22 ~~~~~~~L~a~~ik~~l~r~~i~~~~Id~Vi~G~~~~~g~~~~~aR~aaL~aGlp~~vpa~tVnr~C~SGl~Ai~~Aa~~ 101 (404)
T PRK06205 22 KPVPAEELAATVLRALVERTGIDPARVDDVIFGQCYPNGEAPAIGRVAALDAGLPVTVPGMQLDRRCGSGLQAVITAAMQ 101 (404)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHH
T ss_conf 99988999999999999981989899897999942656767779999999779898875588815053327899999999
Q ss_pred HHCCCCCEEEEEECCCCCCCC
Q ss_conf 973999769995033201458
Q gi|254781019|r 125 VAKSPERKVLIVASDVARYDL 145 (396)
Q Consensus 125 i~sg~~~~aLVV~sD~~~~~~ 145 (396)
|++|....+|+.+.|.++..+
T Consensus 102 I~sG~~dvviaGGvEsmS~~P 122 (404)
T PRK06205 102 VQTGAADVVIAGGAESMSNVE 122 (404)
T ss_pred HHCCCCCEEEECCCCCCCCCC
T ss_conf 964997778741421246685
No 92
>PRK07025 consensus
Probab=98.77 E-value=1.7e-07 Score=65.63 Aligned_cols=99 Identities=9% Similarity=0.100 Sum_probs=84.0
Q ss_pred CCCCHHHHHHHHHHHHHHHC--CHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHH
Q ss_conf 98599999999999999727--9578689999457887546005888863202687735898414203588899878999
Q gi|254781019|r 47 PDEDIVTMAAAAALPIMQNQ--DKNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACAL 124 (396)
Q Consensus 47 ~~Ed~~tmA~~Aa~~~L~~~--~~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~ 124 (396)
.+..+.+|++.+++.+|++. +|++||-|+++...+.......+-.+.-..|++.+++++-++.+|.+++.|+.+|...
T Consensus 22 ~~~~~~~L~~~~i~~~l~r~~i~~~~Id~vi~G~v~~~g~g~n~aR~~al~aGlp~~vp~~tVnr~C~SGl~Ai~~Aa~~ 101 (393)
T PRK07025 22 AKIAAPELGATVIRAVLERAGVKPEQVSEVILGQVLTAGSGQNPARQALIKAGLPNAVPGMTINKVCGSGLKAVMLAANA 101 (393)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHH
T ss_conf 88989999999999999982989899898999924765556649999999769998886488841536778999999999
Q ss_pred HHCCCCCEEEEEECCCCCCCC
Q ss_conf 973999769995033201458
Q gi|254781019|r 125 VAKSPERKVLIVASDVARYDL 145 (396)
Q Consensus 125 i~sg~~~~aLVV~sD~~~~~~ 145 (396)
|++|....+|+.+.|.++..+
T Consensus 102 I~~G~~dvvlagGvEsmS~~P 122 (393)
T PRK07025 102 IVAGDAEIVVAGGQENMSAAP 122 (393)
T ss_pred HHCCCCCEEEEEEEEECCCCC
T ss_conf 867997667886011035676
No 93
>pfam00108 Thiolase_N Thiolase, N-terminal domain. Thiolase is reported to be structurally related to beta-ketoacyl synthase (pfam00109), and also chalcone synthase.
Probab=98.75 E-value=2.1e-07 Score=65.06 Aligned_cols=99 Identities=14% Similarity=0.148 Sum_probs=85.2
Q ss_pred CCCCHHHHHHHHHHHHHHHC--CHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHH
Q ss_conf 98599999999999999727--9578689999457887546005888863202687735898414203588899878999
Q gi|254781019|r 47 PDEDIVTMAAAAALPIMQNQ--DKNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACAL 124 (396)
Q Consensus 47 ~~Ed~~tmA~~Aa~~~L~~~--~~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~ 124 (396)
.+..+.+|++.+.+.+|++. +|++||.||++...+.....-.+-.+.-..|++.+++++.++..|.+++.|+..|...
T Consensus 22 ~~~~~~~L~~~~~~~~l~r~~~~p~~Id~vi~G~~~~~g~~~n~aR~~~l~aGlp~~vp~~tvnr~C~Sgl~Ai~~Aa~~ 101 (264)
T pfam00108 22 KDLSAVDLGAIAIKAALERAGVKPEDVDEVIMGNVLQAGEGQNPARQAALKAGIPDSVPAVTINKVCGSGLKAVALAAQA 101 (264)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHH
T ss_conf 88988999999999999985999688356888436656776629999999769998886689823201799999999999
Q ss_pred HHCCCCCEEEEEECCCCCCCC
Q ss_conf 973999769995033201458
Q gi|254781019|r 125 VAKSPERKVLIVASDVARYDL 145 (396)
Q Consensus 125 i~sg~~~~aLVV~sD~~~~~~ 145 (396)
|++|....+|+.+.|.++..+
T Consensus 102 I~~G~~dv~iagGvEsmS~~P 122 (264)
T pfam00108 102 IRAGDADIVVAGGVESMSNAP 122 (264)
T ss_pred HHCCCCCEEEEECCCCCCCCC
T ss_conf 837987667872213565452
No 94
>PRK07491 consensus
Probab=98.73 E-value=2.3e-07 Score=64.82 Aligned_cols=99 Identities=13% Similarity=0.139 Sum_probs=83.6
Q ss_pred CCCCHHHHHHHHHHHHHHHC--CHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHH
Q ss_conf 98599999999999999727--9578689999457887546005888863202687735898414203588899878999
Q gi|254781019|r 47 PDEDIVTMAAAAALPIMQNQ--DKNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACAL 124 (396)
Q Consensus 47 ~~Ed~~tmA~~Aa~~~L~~~--~~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~ 124 (396)
.+..+.+|++.+.+.+|++. +|++||-||++...+.-...-.+-.+.-..|++.+++++-++..|.+++.|+.+|...
T Consensus 23 ~~~~~~~L~~~~i~~~l~r~~l~~~~Id~Vi~G~v~~~g~g~n~aR~~~L~aGlp~~vp~~tVnr~C~SGl~Ai~~Aa~~ 102 (392)
T PRK07491 23 ANTPAHELGAVAIKAALERAGVDAADVSEVILGQVLTAGQGQNPARQASIKAGLPQESPAWGINQLCGSGLRAVALGAQQ 102 (392)
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHH
T ss_conf 99999999999999999871979899898999945755655619999999769898886489806034577899999998
Q ss_pred HHCCCCCEEEEEECCCCCCCC
Q ss_conf 973999769995033201458
Q gi|254781019|r 125 VAKSPERKVLIVASDVARYDL 145 (396)
Q Consensus 125 i~sg~~~~aLVV~sD~~~~~~ 145 (396)
|++|....+|+.+.|.++..+
T Consensus 103 I~~G~~dvvlagGvEsmS~~P 123 (392)
T PRK07491 103 IANGDAKIVVAGGQESMSMAP 123 (392)
T ss_pred HCCCCCCEEEEECCCCCCCCC
T ss_conf 658986467763244235561
No 95
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=98.72 E-value=3.1e-07 Score=64.02 Aligned_cols=99 Identities=12% Similarity=0.093 Sum_probs=84.2
Q ss_pred CCCCHHHHHHHHHHHHHHHC--CHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHH
Q ss_conf 98599999999999999727--9578689999457887546005888863202687735898414203588899878999
Q gi|254781019|r 47 PDEDIVTMAAAAALPIMQNQ--DKNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACAL 124 (396)
Q Consensus 47 ~~Ed~~tmA~~Aa~~~L~~~--~~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~ 124 (396)
.+..+.+|+..+.+.+|++. +|++||-+|++...+.......+-.+.-..|++..++++.++..|.+++.|+.+|...
T Consensus 22 ~~~~~~~L~~~~i~~~l~~~gl~~~~Id~vi~G~v~~~~~g~n~ar~~al~aGlp~~vp~~tVnr~C~Sgl~Ai~~A~~~ 101 (388)
T PRK06366 22 SKIKAPQLGGAAIKAVIDDAKLDPALVQEVIMGNVIQAGVGQNPAGQAAYHAGLPFGVTKYTVNVVCASGMLAVESAARE 101 (388)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHH
T ss_conf 88998999999999999871989899898999952754556519999999759998886588857255999999999999
Q ss_pred HHCCCCCEEEEEECCCCCCCC
Q ss_conf 973999769995033201458
Q gi|254781019|r 125 VAKSPERKVLIVASDVARYDL 145 (396)
Q Consensus 125 i~sg~~~~aLVV~sD~~~~~~ 145 (396)
|++|...-+|+.+.|.++..+
T Consensus 102 I~sG~~dvviagGvEsMS~~P 122 (388)
T PRK06366 102 IMLGERDLVIAGGMENMSNAP 122 (388)
T ss_pred HHCCCCCEEEEECCCCCCCCC
T ss_conf 966998767870422145785
No 96
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=98.71 E-value=3.3e-07 Score=63.80 Aligned_cols=99 Identities=14% Similarity=0.100 Sum_probs=84.2
Q ss_pred CCCCHHHHHHHHHHHHHHHC--CHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHH
Q ss_conf 98599999999999999727--9578689999457887546005888863202687735898414203588899878999
Q gi|254781019|r 47 PDEDIVTMAAAAALPIMQNQ--DKNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACAL 124 (396)
Q Consensus 47 ~~Ed~~tmA~~Aa~~~L~~~--~~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~ 124 (396)
.+-++.+|++.+.+.+|++. +|++||-||++...+.-...-.+-++.-..|++.+++++-++..|.+++.|+.+|...
T Consensus 23 ~~~~~~~L~a~~i~~~l~r~~i~p~~Id~Vi~G~v~~~~~~~n~AR~aaL~aGlp~~vp~~TVnr~C~SGl~Ai~~Aa~~ 102 (426)
T PRK08170 23 GPFSASDLAVQAGRALLNRQPFAPDDLDEVILGCAMPSPDEANIGRVAALRLGCGEDVPGWTVQRNCASGMQALDSAARN 102 (426)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHH
T ss_conf 88898999999999999974999899998999933625666779999999769998887267766123799999999999
Q ss_pred HHCCCCCEEEEEECCCCCCCC
Q ss_conf 973999769995033201458
Q gi|254781019|r 125 VAKSPERKVLIVASDVARYDL 145 (396)
Q Consensus 125 i~sg~~~~aLVV~sD~~~~~~ 145 (396)
|++|....+|+.+.|.++..+
T Consensus 103 I~~G~~dvviAGGvEsMS~~P 123 (426)
T PRK08170 103 IALGRADLVLAGGTEALSRAP 123 (426)
T ss_pred HHCCCCCEEEEECCCCCCCCC
T ss_conf 855998889993722045675
No 97
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=98.69 E-value=4.4e-07 Score=63.01 Aligned_cols=100 Identities=13% Similarity=0.104 Sum_probs=85.9
Q ss_pred CCCCCHHHHHHHHHHHHHHHC--CHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHH
Q ss_conf 998599999999999999727--957868999945788754600588886320268773589841420358889987899
Q gi|254781019|r 46 NPDEDIVTMAAAAALPIMQNQ--DKNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACA 123 (396)
Q Consensus 46 ~~~Ed~~tmA~~Aa~~~L~~~--~~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~ 123 (396)
-.+-.+.+|++.+.+.+|++. +|++||-||++...+....+-.+-.+.=.-|++.++.++.++..|.+++.|+.+|..
T Consensus 32 l~~~~~~~L~a~~ik~~l~r~~i~p~~Id~Vi~G~v~~~~~g~n~AR~aaL~aGlp~~vp~~TVnr~C~SGl~Ai~~Aa~ 111 (436)
T PRK08963 32 FHGVPAVDLGKMVVGELLARSEIDPKLIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVSRACATSFQAVANVAE 111 (436)
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHH
T ss_conf 58899899999999999998298989999899983675676772999999975999888626776322356899999999
Q ss_pred HHHCCCCCEEEEEECCCCCCCC
Q ss_conf 9973999769995033201458
Q gi|254781019|r 124 LVAKSPERKVLIVASDVARYDL 145 (396)
Q Consensus 124 ~i~sg~~~~aLVV~sD~~~~~~ 145 (396)
.|++|....+|+.+.|.++..+
T Consensus 112 ~I~~G~~dvvlaGGvEsMS~~P 133 (436)
T PRK08963 112 SIMAGTIDIGIAGGADSSSVLP 133 (436)
T ss_pred HHHCCCCCEEEEECCCCCCCCC
T ss_conf 9974999789994512246686
No 98
>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.69 E-value=5.9e-06 Score=56.01 Aligned_cols=258 Identities=18% Similarity=0.151 Sum_probs=137.1
Q ss_pred CC-CEEEEEEEECCCEEECHHHHHHHC--CC---------CHHHHHHHCCCCEEEECCCC--------C----C-HHHHH
Q ss_conf 96-206688873489045599999870--99---------98797630383246655998--------5----9-99999
Q gi|254781019|r 1 MA-IGIEDISFYTTNQYLDLSVIAEKY--RL---------DVAKFYVGIGQERMSVLNPD--------E----D-IVTMA 55 (396)
Q Consensus 1 M~-vGI~~i~~y~P~~~v~~~~l~~~~--g~---------~~~k~~~~lGi~~r~v~~~~--------E----d-~~tmA 55 (396)
|+ |-|++||.-.|--. +.+++-+.. |. +++.+...++ -.+.+.+ | | ...|+
T Consensus 1 MrRVvITGiG~vsp~G~-~~e~~w~~L~~G~sgi~~~~~~d~~~~~~~~a---g~v~~fd~~~~~~~~~~~~~dr~~~la 76 (405)
T PRK08439 1 MKRVVVTGMGMINSLGL-DKESSFKAICNGECGIKKITLFDASDFPVKIA---GEITDFDPTEVMDPKEVKKADRFIQLG 76 (405)
T ss_pred CCCEEEECCEEECCCCC-CHHHHHHHHHCCCCCEEECCCCCCCCCCCEEE---EEECCCCHHHCCCHHHHHHHCHHHHHH
T ss_conf 97199973134798718-99999999983999777488767668974189---983887956738999998628999999
Q ss_pred HHHHHHHHHHCCH------HHCCEEEEECCCCCC----------------C-CH---------HHHHHHHHHHCCCCCCE
Q ss_conf 9999999972795------786899994578875----------------4-60---------05888863202687735
Q gi|254781019|r 56 AAAALPIMQNQDK------NLIDTLFFATESSVD----------------Q-SK---------SAAIWLHKLLGLNSSCR 103 (396)
Q Consensus 56 ~~Aa~~~L~~~~~------~~Id~li~~T~t~~~----------------~-~~---------~~a~~v~~~Lgl~~~~~ 103 (396)
+.|++++|++++. +.++ ++++|..+.. . .| ..+..|...+++...
T Consensus 77 l~aa~eAl~dAGl~~~~~~~r~G-v~~gt~~g~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~a~~is~~~~~~Gp-- 153 (405)
T PRK08439 77 LKAAREAMKDAGFLEEHDKDRFG-VSSASGIGGLPNIEKNSIICFEKGPRKISPFFIPSALVNMLGGFISIEHGLKGP-- 153 (405)
T ss_pred HHHHHHHHHHCCCCCCCCCCCEE-EEEEECCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC--
T ss_conf 99999999844877557756679-999866775577999999998469764480276788888999999998399897--
Q ss_pred EEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC-----------C----CCC---CC--------CCCCCCE
Q ss_conf 89841420358889987899997399976999503320145-----------8----887---53--------3478302
Q gi|254781019|r 104 VVELKQACYSATCALHMACALVAKSPERKVLIVASDVARYD-----------L----GSS---GE--------PTQGCGA 157 (396)
Q Consensus 104 ~~Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~-----------~----~~~---~~--------~t~GaGA 157 (396)
++-+..||++++.||..|..+|++|....+||.++|..... + +++ .+ +..|-||
T Consensus 154 ~~tv~tACass~~Ai~~A~~~I~~G~~d~~ivgG~~~~l~~~~~~~f~~~~~ls~~~~~P~~~~rPFD~~r~G~v~gEGa 233 (405)
T PRK08439 154 NLSSVTACAAGTHAIIEAVKTIMLGGADKMLVVGAESAICPVGIGGFASMKALSTRNDDPKKASRPFDKDRDGFVMGEGA 233 (405)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCE
T ss_conf 65626375899999999999997089776774150220273568999875323025889654667876899847742467
Q ss_pred EEEEECCCC-------CCCEEEECCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEE
Q ss_conf 468842687-------6303531000156786511275887542356601698999999999999999629882110123
Q gi|254781019|r 158 VAILISSQT-------SILEIEDITGIYTNDCMDFWRPNYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHDFNDFQYF 230 (396)
Q Consensus 158 ~Allv~~~~-------~~~~~~~~~~~~~~~~~df~rp~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~~did~~ 230 (396)
+++++++.. ++......++. +.|......|.. +| ...+++..+++.|++ +|||+
T Consensus 234 ~~lvLe~~~~A~~rga~i~a~i~G~~~-~~d~~~~t~P~~------~g----------~~~a~~~Al~~ag~~--~idyi 294 (405)
T PRK08439 234 GALVLEEYESAKKRGAKIYAELIGFGE-SGDANHITSPAP------DG----------PLRAMKKALEMAGNP--KVDYV 294 (405)
T ss_pred EEEEECCHHHHHHCCCEEEEEEEEECC-CCCCCCCCCCCH------HH----------HHHHHHHHHHHCCCC--CEEEE
T ss_conf 889724488786579968999998767-668889989898------99----------999999999975999--61179
Q ss_pred EECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
Q ss_conf 311454057888886411024544100134555433344453238543233899999999
Q gi|254781019|r 231 CYHQPFTRMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALISLL 290 (396)
Q Consensus 231 v~H~p~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~slL 290 (396)
..|-.+.++.+....+-.+.+..+. . ..-+....-..+|++-.||=-+.+...+
T Consensus 295 ~aHgTgT~~gD~~E~~Ai~~vfg~~-----~-~~~~v~S~Ks~iGH~~gAaG~~e~i~~~ 348 (405)
T PRK08439 295 NAHGTSTPYNDKNETAALKELFGSK-----E-NVPPVSSTKGQIGHCLGAAGAIEAVISI 348 (405)
T ss_pred EEECCCCCCCCHHHHHHHHHHHCCC-----C-CCCCCCCCHHHHCCCHHHHHHHHHHHHH
T ss_conf 7205768787899999999985666-----7-7888657310003236667899999999
No 99
>TIGR02845 spore_V_AD stage V sporulation protein AD; InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation ..
Probab=98.68 E-value=1.1e-06 Score=60.46 Aligned_cols=179 Identities=21% Similarity=0.185 Sum_probs=115.8
Q ss_pred CCCHHHHH-----HHHHHHHHHHCC--HH--HCCEEEEECCCCCCCCHH--HHHHHHHHHCCCCCCEEEEECCCHHHHHH
Q ss_conf 85999999-----999999997279--57--868999945788754600--58888632026877358984142035888
Q gi|254781019|r 48 DEDIVTMA-----AAAALPIMQNQD--KN--LIDTLFFATESSVDQSKS--AAIWLHKLLGLNSSCRVVELKQACYSATC 116 (396)
Q Consensus 48 ~Ed~~tmA-----~~Aa~~~L~~~~--~~--~Id~li~~T~t~~~~~~~--~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~ 116 (396)
+||+..|| .+|+..||++++ .+ +||+++= -|..-+ +|+++.+.|+++ . +=+=.||+-++-
T Consensus 42 ge~SwEkAEr~lm~~Av~~aL~Ka~l~~~PP~vD~~LA-----GDLLNQ~~~anFvAR~L~iP-f---lGLygACsTs~E 112 (331)
T TIGR02845 42 GEDSWEKAERKLMEDAVNLALKKANLKKDPPDVDFFLA-----GDLLNQIITANFVARELGIP-F---LGLYGACSTSME 112 (331)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEH-----HHHHHHHHHHHHHHHHCCCC-C---EECCCHHHHHHH
T ss_conf 72018999999999999998753587127872111201-----03666789998988745888-2---340213578999
Q ss_pred HHHHHHHHHHCCCCCEEEEEECCCCC---CCCCCCCCCC-----------CCCCEEEEEECCCCCCCEEEECCCCCCCCC
Q ss_conf 99878999973999769995033201---4588875334-----------783024688426876303531000156786
Q gi|254781019|r 117 ALHMACALVAKSPERKVLIVASDVAR---YDLGSSGEPT-----------QGCGAVAILISSQTSILEIEDITGIYTNDC 182 (396)
Q Consensus 117 AL~~A~~~i~sg~~~~aLVV~sD~~~---~~~~~~~~~t-----------~GaGA~Allv~~~~~~~~~~~~~~~~~~~~ 182 (396)
+|.++..||..|=.+++|.-+|-... ...+.|-|+. =||||+ |+++.+....+...+...-.|.
T Consensus 113 ~L~~gA~lv~GGfAd~vLaAtSSHy~taERQFRYPTEyG~Qkp~tAq~TVTGAGA~--~l~~~~~~~~it~aT~GkV~D~ 190 (331)
T TIGR02845 113 TLALGAMLVDGGFADRVLAATSSHYATAERQFRYPTEYGVQKPPTAQWTVTGAGAV--LLASTGGGPRITSATIGKVVDL 190 (331)
T ss_pred HHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEHHHEE--EECCCCCCCEEEEEEEEEEEEC
T ss_conf 99999999832002211112111135322102565125611599886125034648--6544789436414530147712
Q ss_pred CCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCCC-CHHHHHHHHHHCCH
Q ss_conf 511275887542356601698999999999999999629882110123311454-05788888641102
Q gi|254781019|r 183 MDFWRPNYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHDFNDFQYFCYHQPF-TRMAEKAHIRLSKI 250 (396)
Q Consensus 183 ~df~rp~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~~did~~v~H~p~-~k~~~~~~~~l~~~ 250 (396)
. ..-|.. | | ..-.-+--..++.-+++.|.+.+|+|.++- .. +++.+...++|+..
T Consensus 191 G-~~dP~~-----m-G----~AMAPAAaDTI~~Hf~dtg~~~~DYDLIvT--GDL~rvG~~I~~~LL~e 246 (331)
T TIGR02845 191 G-LTDPLD-----M-G----AAMAPAAADTIEAHFKDTGRSVDDYDLIVT--GDLARVGSEILRKLLKE 246 (331)
T ss_pred C-CCCCCC-----H-H----HHHHHHHHHHHHHHHHHCCCCCCEEEEEEE--CCHHHHHHHHHHHHHHH
T ss_conf 3-368641-----1-3----541268999999999870788040136787--33002148999999888
No 100
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=98.65 E-value=6.5e-07 Score=61.96 Aligned_cols=99 Identities=12% Similarity=0.003 Sum_probs=82.0
Q ss_pred CCCCHHHHHHHHHHHHHHHCC--HHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHH
Q ss_conf 985999999999999997279--578689999457887546005888863202687735898414203588899878999
Q gi|254781019|r 47 PDEDIVTMAAAAALPIMQNQD--KNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACAL 124 (396)
Q Consensus 47 ~~Ed~~tmA~~Aa~~~L~~~~--~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~ 124 (396)
.+-.+.+|++.+.+.+|++.+ |++||-||++...+.-...-.+-.+.=.-|++.+++++-++..|.+++.|+.+|...
T Consensus 27 ~~~~~~~L~~~~i~~~l~r~gi~~~~iD~vi~G~v~~~g~~~n~aR~~aL~aGlp~~vp~~TVnr~C~SGl~Ai~~Aa~~ 106 (428)
T PRK09268 27 ADASNQDMLTAALDGLVERFGLHGERLGEVVAGAVLKHSRDFNLTRECVLGSALSPETPAYDLQQACGTGLEAAILVANK 106 (428)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHHHHHHHH
T ss_conf 88988999999999999982999899998999935765656539999999669898887268852757999999999999
Q ss_pred HHCCCCCEEEEEECCCCCCCC
Q ss_conf 973999769995033201458
Q gi|254781019|r 125 VAKSPERKVLIVASDVARYDL 145 (396)
Q Consensus 125 i~sg~~~~aLVV~sD~~~~~~ 145 (396)
|++|....+|+.+.|.++..+
T Consensus 107 I~~G~~dvviAGGvEsmS~~P 127 (428)
T PRK09268 107 IALGQIDSGIAGGVDTTSDAP 127 (428)
T ss_pred HHCCCCCEEEEECCCCCCCCC
T ss_conf 987999889994612356787
No 101
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=98.64 E-value=7.3e-07 Score=61.67 Aligned_cols=99 Identities=13% Similarity=0.091 Sum_probs=82.5
Q ss_pred CCCCHHHHHHHHHHHHHHHC--CHHHCCEEEEECCCCCCC-CHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHH
Q ss_conf 98599999999999999727--957868999945788754-600588886320268773589841420358889987899
Q gi|254781019|r 47 PDEDIVTMAAAAALPIMQNQ--DKNLIDTLFFATESSVDQ-SKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACA 123 (396)
Q Consensus 47 ~~Ed~~tmA~~Aa~~~L~~~--~~~~Id~li~~T~t~~~~-~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~ 123 (396)
.+-.+.+|++.+.+.+|++. +|++||-++++...+... ..-.+-...-.-|++..++++-++.+|.+++.|+..|..
T Consensus 22 ~~~~~~~L~a~~i~~~l~r~~i~~~~Id~vi~G~v~~~g~~~~n~aR~~al~aGlp~~vp~~tVnr~CaSGl~Ai~~Aa~ 101 (401)
T PRK08131 22 ASVRPDDLAATVIRRLVEKSGFAGDDIEDVILGCTNQAGEDSRNVARNALLLAGLPVTVPGQTVNRLCASGLSAVIDAAR 101 (401)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHH
T ss_conf 99988999999999999972989899898999814665654466999999966999888716875253578999999999
Q ss_pred HHHCCCCCEEEEEECCCCCCCC
Q ss_conf 9973999769995033201458
Q gi|254781019|r 124 LVAKSPERKVLIVASDVARYDL 145 (396)
Q Consensus 124 ~i~sg~~~~aLVV~sD~~~~~~ 145 (396)
.|++|....+|+.+.|.++..+
T Consensus 102 ~I~~G~~dvvlagGvEsMS~~P 123 (401)
T PRK08131 102 AITCGEGDLYLAGGVESMSRAP 123 (401)
T ss_pred HHHCCCCCEEEEEEEECCCCCC
T ss_conf 9857997725885065035464
No 102
>PRK06689 consensus
Probab=98.59 E-value=1.3e-06 Score=60.18 Aligned_cols=99 Identities=10% Similarity=0.081 Sum_probs=82.3
Q ss_pred CCCCHHHHHHHHHHHHHHHC--CHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHH
Q ss_conf 98599999999999999727--9578689999457887546005888863202687735898414203588899878999
Q gi|254781019|r 47 PDEDIVTMAAAAALPIMQNQ--DKNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACAL 124 (396)
Q Consensus 47 ~~Ed~~tmA~~Aa~~~L~~~--~~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~ 124 (396)
.+..+.+|++.+.+.+|++. +|++||-||++.+.+.-...-.+-+..=..|++.+++++.++..|.+++.|+.+|...
T Consensus 22 ~~~~~~~L~a~~i~~~l~r~gi~p~~Id~vi~G~~~~~g~~~n~AR~aaL~aGlp~~vp~~tVnr~C~Sgl~Ai~~aa~~ 101 (391)
T PRK06689 22 KNVTPVELAVPVLQEAVKRGGVEPHEVDEVILGHCIQRTDEANTARTAALAAGFPDTVTGYTIQRQCSSGMQAIMSAAMQ 101 (391)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHHHHH
T ss_conf 88988999999999999874999799898999806676666609999999769998887067766215789999999999
Q ss_pred HHCCCCCEEEEEECCCCCCCC
Q ss_conf 973999769995033201458
Q gi|254781019|r 125 VAKSPERKVLIVASDVARYDL 145 (396)
Q Consensus 125 i~sg~~~~aLVV~sD~~~~~~ 145 (396)
|++|....+|+.+.|.++..+
T Consensus 102 I~~G~~dvviAGGvEsMS~~P 122 (391)
T PRK06689 102 IQLGVSEVVVAGGVEAMSSSP 122 (391)
T ss_pred HHCCCCCEEEEECCCCCCCCC
T ss_conf 867998656860434677774
No 103
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=98.53 E-value=2.3e-06 Score=58.60 Aligned_cols=99 Identities=13% Similarity=0.103 Sum_probs=81.7
Q ss_pred CCCCHHHHHHHHHHHHHHHC--CHHHCCEEEEECCCCCC-CCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHH
Q ss_conf 98599999999999999727--95786899994578875-4600588886320268773589841420358889987899
Q gi|254781019|r 47 PDEDIVTMAAAAALPIMQNQ--DKNLIDTLFFATESSVD-QSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACA 123 (396)
Q Consensus 47 ~~Ed~~tmA~~Aa~~~L~~~--~~~~Id~li~~T~t~~~-~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~ 123 (396)
.+-.+.+|+..+.+.+|++. +|++||-|+++...... ...-.+-...=.-|++.+++++.++..|.+++.|+.+|..
T Consensus 22 ~~~~~~~L~a~~ik~~l~r~~l~~~~id~Vi~G~v~~~g~~g~n~aR~aaL~aGlp~~vpa~tVnr~C~Sgl~Ai~~aa~ 101 (387)
T PRK07850 22 SGLHAAELLGAVQRAVVERAGIDPGDVEQVIGGCVTQAGEQSNNITRVAWLTAGLPEHVGATTVDCQCGSAQQANHLVAG 101 (387)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHH
T ss_conf 99988999999999999872989899798999878676554568999999977999767606563511178999999999
Q ss_pred HHHCCCCCEEEEEECCCCCCCC
Q ss_conf 9973999769995033201458
Q gi|254781019|r 124 LVAKSPERKVLIVASDVARYDL 145 (396)
Q Consensus 124 ~i~sg~~~~aLVV~sD~~~~~~ 145 (396)
.|++|....+|+.+.|.++..+
T Consensus 102 ~I~~G~~dv~iaGG~EsmS~~P 123 (387)
T PRK07850 102 LIAAGAIDVGIACGIEAMSRVP 123 (387)
T ss_pred HHHCCCCCEEEEECCCCCCCCC
T ss_conf 9877998899982503036787
No 104
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases; InterPro: IPR002155 Two different types of thiolase , , are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases ..
Probab=98.52 E-value=1.4e-06 Score=59.90 Aligned_cols=99 Identities=15% Similarity=0.164 Sum_probs=83.5
Q ss_pred CCCCHHHHHHHHHHHHHHHC-C--HHHCCEEEEECCCCCCCC-HHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHH
Q ss_conf 98599999999999999727-9--578689999457887546-0058888632026877358984142035888998789
Q gi|254781019|r 47 PDEDIVTMAAAAALPIMQNQ-D--KNLIDTLFFATESSVDQS-KSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMAC 122 (396)
Q Consensus 47 ~~Ed~~tmA~~Aa~~~L~~~-~--~~~Id~li~~T~t~~~~~-~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~ 122 (396)
.+-.+.+|++.+.+.+|++. + |++||.||++...+.-.- .-.+=...=.-|++.+++++.|+..|.+++.|+..|.
T Consensus 20 ~~~~a~dL~~~~i~~ll~r~p~l~~~~iD~vi~G~V~~~g~~g~~~aR~aaL~AGl~~~vpa~tvnr~CaSGl~Av~~aa 99 (447)
T TIGR01930 20 KDLSAEDLGAAVIKELLERNPGLDPELIDDVILGNVLQAGEQGQNIARQAALAAGLPESVPALTVNRQCASGLQAVALAA 99 (447)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCCHHHCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHHHHHH
T ss_conf 78787999999999999853688846728177610005776441489999987068987873442023242799999999
Q ss_pred HHHHCCCCCEEEEEECCCCCCCC
Q ss_conf 99973999769995033201458
Q gi|254781019|r 123 ALVAKSPERKVLIVASDVARYDL 145 (396)
Q Consensus 123 ~~i~sg~~~~aLVV~sD~~~~~~ 145 (396)
..|++|...-+|.=+.|.++..|
T Consensus 100 ~~I~~G~~d~~~AGGvEsMS~~P 122 (447)
T TIGR01930 100 QKIRAGEADVVVAGGVESMSRVP 122 (447)
T ss_pred HHHHCCCCCEEEEECCCCCCCCC
T ss_conf 88534850167860745446675
No 105
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=98.52 E-value=2.4e-06 Score=58.40 Aligned_cols=99 Identities=13% Similarity=0.149 Sum_probs=82.0
Q ss_pred CCCCHHHHHHHHHHHHHHH---CCHHHCCEEEEECCCCCCC-CHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHH
Q ss_conf 9859999999999999972---7957868999945788754-60058888632026877358984142035888998789
Q gi|254781019|r 47 PDEDIVTMAAAAALPIMQN---QDKNLIDTLFFATESSVDQ-SKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMAC 122 (396)
Q Consensus 47 ~~Ed~~tmA~~Aa~~~L~~---~~~~~Id~li~~T~t~~~~-~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~ 122 (396)
.+..+.+|++.+++.+|++ .+|++||-+|++...+... ..-.+-.+.-..|++.+++++-++..|.+++.|+.+|.
T Consensus 22 ~~~~~~~L~a~~i~~~l~r~~~l~~~~Id~vi~G~~~~~g~~g~n~aR~aal~aGlp~~vpa~TVnr~C~SGl~Ai~~Aa 101 (401)
T PRK09050 22 SSVRADDLGAVPLKALMERNPGVDWEAVDDVIYGCANQAGEDNRNVARMSALLAGLPVSVPGTTINRLCGSGMDAVGTAA 101 (401)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCCHHHCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHH
T ss_conf 99988999999999999735896989989599963776574557699999997799988855786013078999999999
Q ss_pred HHHHCCCCCEEEEEECCCCCCCC
Q ss_conf 99973999769995033201458
Q gi|254781019|r 123 ALVAKSPERKVLIVASDVARYDL 145 (396)
Q Consensus 123 ~~i~sg~~~~aLVV~sD~~~~~~ 145 (396)
..|++|....+|+.+.|.++..+
T Consensus 102 ~~I~~G~~dv~iaGGvEsmS~~P 124 (401)
T PRK09050 102 RAIKAGEAELMIAGGVESMSRAP 124 (401)
T ss_pred HHHHCCCCCEEEEECCCCCCCCC
T ss_conf 99847997779861423556563
No 106
>PRK08234 consensus
Probab=98.51 E-value=2.6e-06 Score=58.28 Aligned_cols=99 Identities=15% Similarity=0.151 Sum_probs=83.2
Q ss_pred CCCCHHHHHHHHHHHHHHH---CCHHHCCEEEEECCCCCCC-CHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHH
Q ss_conf 9859999999999999972---7957868999945788754-60058888632026877358984142035888998789
Q gi|254781019|r 47 PDEDIVTMAAAAALPIMQN---QDKNLIDTLFFATESSVDQ-SKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMAC 122 (396)
Q Consensus 47 ~~Ed~~tmA~~Aa~~~L~~---~~~~~Id~li~~T~t~~~~-~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~ 122 (396)
.+..+.+|++.+.+.+|++ .+|++||.+|++...+... .+-.+-.+.-.-|++.+++++-++..|.+++.|+.+|.
T Consensus 22 ~~~~~~~L~a~~i~~~l~r~~~~~~~~Id~vi~G~v~~~g~~~~n~aR~aaL~aGlp~~vpa~tVnr~C~SGl~Ai~~Aa 101 (400)
T PRK08234 22 RDVRPDDLAAVVIRALIERNPNVPVEQIDDVVFGNANQAGEDNRNVARMAALLAGLPVEVAGVTVNRLCGSGLDAVAYAA 101 (400)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCCHHHCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHH
T ss_conf 88988999999999999746896989989899990676564446699999997699988861677153035999999999
Q ss_pred HHHHCCCCCEEEEEECCCCCCCC
Q ss_conf 99973999769995033201458
Q gi|254781019|r 123 ALVAKSPERKVLIVASDVARYDL 145 (396)
Q Consensus 123 ~~i~sg~~~~aLVV~sD~~~~~~ 145 (396)
..|++|....+|+.+.|.++..+
T Consensus 102 ~~I~~G~~dvviagGvEsmS~~P 124 (400)
T PRK08234 102 RAIWAGEGEIMIAGGTESMTRAP 124 (400)
T ss_pred HHHHCCCCCEEEECCCCCCCCCC
T ss_conf 99858997578851524434364
No 107
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=98.50 E-value=2.3e-05 Score=52.35 Aligned_cols=96 Identities=14% Similarity=0.150 Sum_probs=77.6
Q ss_pred CCCCHHHHHHHHHHHHHHHCCHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHH
Q ss_conf 98599999999999999727957868999945788754600588886320268773589841420358889987899997
Q gi|254781019|r 47 PDEDIVTMAAAAALPIMQNQDKNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACALVA 126 (396)
Q Consensus 47 ~~Ed~~tmA~~Aa~~~L~~~~~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i~ 126 (396)
.+..+.+|+..+.+.+.++. |++||-|+++...+.- ...+-.+.-..|++.+++++-++..|.+++.|+.+|...|+
T Consensus 21 ~~~~~~~L~~~~i~~l~~~~-~~~Id~vi~G~v~~~g--~n~aR~aaL~aGlp~~vp~~tVnr~C~SGl~Av~~aa~~I~ 97 (361)
T PRK06690 21 KDYEVQQLAAPLLTFLSKGM-ERAIDDVILGNVVGPG--GNVARLSALEAGLGLHIPGVTIDRQCGAGLEAIRTACHFIQ 97 (361)
T ss_pred CCCCHHHHHHHHHHHHHHCC-CCCCCEEEEEECCCCC--CHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHH
T ss_conf 89988999999999997279-1116859999567767--50999999975999888758887531588999999999996
Q ss_pred CCCCCEEEEEECCCCCCCC
Q ss_conf 3999769995033201458
Q gi|254781019|r 127 KSPERKVLIVASDVARYDL 145 (396)
Q Consensus 127 sg~~~~aLVV~sD~~~~~~ 145 (396)
+|....+++.+.|.++..+
T Consensus 98 ~G~~dvviAGGvEsmS~~P 116 (361)
T PRK06690 98 GGAGKCYIAGGVESTSTSP 116 (361)
T ss_pred CCCCCEEEECCCCHHCCCC
T ss_conf 7999989984701401252
No 108
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=98.43 E-value=5.4e-06 Score=56.28 Aligned_cols=99 Identities=12% Similarity=0.137 Sum_probs=82.0
Q ss_pred CCCCHHHHHHHHHHHHHHH---CCHHHCCEEEEECCCCCCC-CHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHH
Q ss_conf 9859999999999999972---7957868999945788754-60058888632026877358984142035888998789
Q gi|254781019|r 47 PDEDIVTMAAAAALPIMQN---QDKNLIDTLFFATESSVDQ-SKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMAC 122 (396)
Q Consensus 47 ~~Ed~~tmA~~Aa~~~L~~---~~~~~Id~li~~T~t~~~~-~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~ 122 (396)
.+..+.+|++.+.+.++++ .+|++||-||++...+... ..-.+-...-..|++..++++-++..|.+++.|+.+|.
T Consensus 22 ~~~~~~~L~a~~i~~~l~r~~~i~~~~Id~Vi~G~~~~~g~~g~n~aR~~aL~aGlp~~vpa~TVnr~C~SGl~Ai~~aa 101 (400)
T PRK13359 22 SSVRADDLGAVPLKALVERNRDVDWAAIDDVIYGCANQAGEDNRNVARMSLLLAGLPHGVPGTTINRLCGSGMDAVGVAA 101 (400)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCCHHHCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHH
T ss_conf 99988999999999999726997989999799982775565457689999997699988762676132114999999999
Q ss_pred HHHHCCCCCEEEEEECCCCCCCC
Q ss_conf 99973999769995033201458
Q gi|254781019|r 123 ALVAKSPERKVLIVASDVARYDL 145 (396)
Q Consensus 123 ~~i~sg~~~~aLVV~sD~~~~~~ 145 (396)
..|++|....+|+.+.|.++..+
T Consensus 102 ~~I~~G~~dvviAGGvEsmS~~P 124 (400)
T PRK13359 102 RAIKSGEAALMIAGGVESMSRAP 124 (400)
T ss_pred HHHHCCCCCEEEECCEECCCCCC
T ss_conf 99857998878851551155564
No 109
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=98.25 E-value=1.7e-05 Score=53.21 Aligned_cols=99 Identities=13% Similarity=0.116 Sum_probs=81.7
Q ss_pred CCCCHHHHHHHHHHHHHHHCCH-HHCCEEEEECCCCCC-CCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHH
Q ss_conf 9859999999999999972795-786899994578875-46005888863202687735898414203588899878999
Q gi|254781019|r 47 PDEDIVTMAAAAALPIMQNQDK-NLIDTLFFATESSVD-QSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACAL 124 (396)
Q Consensus 47 ~~Ed~~tmA~~Aa~~~L~~~~~-~~Id~li~~T~t~~~-~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~ 124 (396)
.+-.+.+|++.+.+.+|++.+. .+||-||++...+.- ...-.+-++.-.-|++..++++-++..|.+++.|+.+|...
T Consensus 17 ~~~~~~~L~a~~i~~~l~r~~i~~~id~vi~G~~~~~~~~g~n~aR~aal~aGlp~~vp~~TVnr~C~SGl~Ai~~aa~~ 96 (384)
T PRK07661 17 KTVRPDDLGALVVKETLKRANYEGPIDDLIIGCAMPEAEQGLNMARNIGALAGLPYTVPAITINRYCSSGLQSIAYGAER 96 (384)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHH
T ss_conf 99999999999999999860989635969999476646556669999999769998877267735021689999999999
Q ss_pred HHCCCCCEEEEEECCCCCCCC
Q ss_conf 973999769995033201458
Q gi|254781019|r 125 VAKSPERKVLIVASDVARYDL 145 (396)
Q Consensus 125 i~sg~~~~aLVV~sD~~~~~~ 145 (396)
|++|...-+|+.+.|.++..+
T Consensus 97 I~~G~~dvviAGGvEsMS~~P 117 (384)
T PRK07661 97 IMLGHSEAVLAGGAESMSLVP 117 (384)
T ss_pred HHCCCCCEEEECCEECCCCCC
T ss_conf 976997678754621225786
No 110
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.22 E-value=0.00012 Score=47.90 Aligned_cols=179 Identities=18% Similarity=0.155 Sum_probs=110.3
Q ss_pred CHHHHHHHHHHHHHHHCCHH---HCC---EEEEECCCCCCC----------------------C----H-HHHHHHHHHH
Q ss_conf 99999999999999727957---868---999945788754----------------------6----0-0588886320
Q gi|254781019|r 50 DIVTMAAAAALPIMQNQDKN---LID---TLFFATESSVDQ----------------------S----K-SAAIWLHKLL 96 (396)
Q Consensus 50 d~~tmA~~Aa~~~L~~~~~~---~Id---~li~~T~t~~~~----------------------~----~-~~a~~v~~~L 96 (396)
....+++.|+.+||++++.+ ..+ .++++|..+... . + ..+..|...+
T Consensus 70 ~~~~~a~~Aa~~Al~dAgl~~~~~~~~r~gv~iGsg~gg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~vs~~~ 149 (412)
T COG0304 70 RFSQLAVVAAVEALEDAGLDNELNVDMRVGVAIGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNLAAGNVAIVF 149 (412)
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHCCCHHHHHHHHHH
T ss_conf 89999999999999975998433568627999931677841256678888752786676820566653514789999985
Q ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC---------------CCCCC---CCC--------
Q ss_conf 2687735898414203588899878999973999769995033201---------------45888---753--------
Q gi|254781019|r 97 GLNSSCRVVELKQACYSATCALHMACALVAKSPERKVLIVASDVAR---------------YDLGS---SGE-------- 150 (396)
Q Consensus 97 gl~~~~~~~Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~---------------~~~~~---~~~-------- 150 (396)
|+.. +.+-+..||..+..|+..|..+|+.|....+++.++|-.. ..-++ ..+
T Consensus 150 g~~G--~~~t~~tACatg~~aIg~A~~~I~~G~ad~~iaGG~e~~i~~~~i~gF~a~~Alst~nd~p~~asrPfd~~RdG 227 (412)
T COG0304 150 GLKG--PNYTPVTACATGAHAIGDAVRLIRLGKADVVIAGGAEAAITPLGIAGFEAMRALSTRNDDPEKASRPFDKNRDG 227 (412)
T ss_pred CCCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
T ss_conf 8778--76780666776888999999999739999899846533158989999998787567889953358888888997
Q ss_pred CCCCCCEEEEEECCCC-------CCCEEEECCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 3478302468842687-------630353100015678651127588754235660169899999999999999962988
Q gi|254781019|r 151 PTQGCGAVAILISSQT-------SILEIEDITGIYTNDCMDFWRPNYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHD 223 (396)
Q Consensus 151 ~t~GaGA~Allv~~~~-------~~~~~~~~~~~~~~~~~df~rp~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~ 223 (396)
|..|-||.++++.... ++..+...++. +.|.++.-.|.. +|. -...+++..|+..|++
T Consensus 228 FV~gEGag~lVLE~~ehA~aRGA~Iyaei~G~g~-~~Da~h~t~P~p------~g~--------Ga~~am~~AL~~Agl~ 292 (412)
T COG0304 228 FVIGEGAGALVLEELEHALARGAKIYAEIVGYGT-TSDAYHITAPAP------DGE--------GAIRAMRAALADAGLT 292 (412)
T ss_pred EEEECCEEEEEECCHHHHHHCCCCEEEEEEEEEE-CCCCCCCCCCCC------CCC--------HHHHHHHHHHHHCCCC
T ss_conf 7885404578863762486689965899987773-144013678997------875--------6999999999984999
Q ss_pred HHHCCEEEECCCCCHHHHHHHH
Q ss_conf 2110123311454057888886
Q gi|254781019|r 224 FNDFQYFCYHQPFTRMAEKAHI 245 (396)
Q Consensus 224 ~~did~~v~H~p~~k~~~~~~~ 245 (396)
++||||+..|-.+.+.-++...
T Consensus 293 ~~~idYinaHgTsT~~nD~~E~ 314 (412)
T COG0304 293 PEDIDYINAHGTSTPANDKAES 314 (412)
T ss_pred HHHCCEEECCCCCCCCCCHHHH
T ss_conf 7679989478766877659999
No 111
>PRK08304 stage V sporulation protein AD; Validated
Probab=98.07 E-value=0.00039 Score=44.74 Aligned_cols=237 Identities=18% Similarity=0.139 Sum_probs=126.5
Q ss_pred HHHHHHHHHHHHHHHCC--HHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCC
Q ss_conf 99999999999997279--5786899994578875460058888632026877358984142035888998789999739
Q gi|254781019|r 51 IVTMAAAAALPIMQNQD--KNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACALVAKS 128 (396)
Q Consensus 51 ~~tmA~~Aa~~~L~~~~--~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i~sg 128 (396)
-..|--+|+..+|.+++ ++|||.++-+---. ---.+++..+.|++ +-+-+-.||+-..-+|.+|.-+|..|
T Consensus 56 E~~m~~~A~~~al~Ka~l~~~dId~~~aGDLln---Q~i~s~f~ar~l~I----Pf~GlyGACST~~Esl~laa~~vdgg 128 (336)
T PRK08304 56 ESKLMSDAIQQALQKANLKESDIDYLLAGDLLN---QTISANFVARELGI----PFLGLYGACSTMMESLALASMLIDGG 128 (336)
T ss_pred HHHHHHHHHHHHHHHCCCCHHHCEEEEECHHHH---HHHHHHHHHHHCCC----CEEEHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 999999999999997499977873897222455---46776677986599----80102567788999999999998266
Q ss_pred CCCEEEEEECCCC-C--CCCCCCCCC------C-----CCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCE
Q ss_conf 9976999503320-1--458887533------4-----783024688426876303531000156786511275887542
Q gi|254781019|r 129 PERKVLIVASDVA-R--YDLGSSGEP------T-----QGCGAVAILISSQTSILEIEDITGIYTNDCMDFWRPNYRRTA 194 (396)
Q Consensus 129 ~~~~aLVV~sD~~-~--~~~~~~~~~------t-----~GaGA~Allv~~~~~~~~~~~~~~~~~~~~~df~rp~~~~~~ 194 (396)
-.+++|..+|-.. + .....|-|+ | -|+||+ ++++++....+...+.. -+.|+=- .+-.
T Consensus 129 ~A~~vla~tSSH~~tAErQFR~P~EyG~Qrp~tAqwTVTGaGa~--il~~~~~~p~It~~TiG---kVvD~Gi---~D~~ 200 (336)
T PRK08304 129 FADRVLAATSSHFATAERQFRFPTEYGGQRPPTAQWTVTGAGAV--LLSKEGSGPKITYATIG---KVIDYGI---KDPL 200 (336)
T ss_pred CHHHHHEECCCCCHHHHHHCCCCHHCCCCCCCCCCEEEECEEEE--EEECCCCCCEEEEEEEE---EEEECCC---CCCC
T ss_conf 36453100233420366551580320677998651788751799--98138999779898678---8876488---8843
Q ss_pred EECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCCHHHHHHHHHHCCHHHHHHHH-------HHHHHHHHHH
Q ss_conf 356601698999999999999999629882110123311454057888886411024544100-------1345554333
Q gi|254781019|r 195 LVDGKYSTKIYLQSLEAVWHDYQKNKGHDFNDFQYFCYHQPFTRMAEKAHIRLSKIVHQNLSV-------AEIEKAIGIT 267 (396)
Q Consensus 195 ~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~~did~~v~H~p~~k~~~~~~~~l~~~~~~~~~~-------~~~e~~~~~~ 267 (396)
.| | .+-..+--..+.+.++..|.+++|+|.++-- --++..++....|++...-++.. ..+...-+..
T Consensus 201 nM-G----aAMAPAA~dTI~~hf~Dtg~~p~dYDlIvTG-DLg~vG~~i~~~Ll~e~g~~i~~~~~DCG~~iyd~e~Qdv 274 (336)
T PRK08304 201 DM-G----AAMAPAAADTIKQHFEDTGRTPEDYDLIVTG-DLGAVGREIAKELLKEEGYDISDNYNDCGVMIYDSEQQDV 274 (336)
T ss_pred CC-H----HHHHHHHHHHHHHHHHHHCCCHHHCCEEEEC-CHHHHHHHHHHHHHHHCCCCHHHCCCCCCEEEECCCCCCC
T ss_conf 03-5----5553789999999999809990023489966-4588789999999998097855522756768763777765
Q ss_pred HHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCE
Q ss_conf 4445323854323389999999971574369888999840798303
Q gi|254781019|r 268 TLYNRLIGNSYTASLYIALISLLDHSSENLAGKRVGFFSYGSGCVA 313 (396)
Q Consensus 268 ~~~~~~~GN~~SASi~l~L~slLe~~~~~~~G~rIll~syGsG~~a 313 (396)
..|-.+.+.--..+.+.+-+.-+...=+|||+.+-|.=+.-
T Consensus 275 -----~aGGSGcgCSAvV~~g~il~~m~~g~~krvL~vaTGALlSp 315 (336)
T PRK08304 275 -----FAGGSGCACSAVVTYGYLYKELQKGKLKRVLVVATGALLSP 315 (336)
T ss_pred -----CCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCHHCCC
T ss_conf -----68876544478998999899986487317999974031382
No 112
>pfam07451 SpoVAD Stage V sporulation protein AD (SpoVAD). This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation.
Probab=98.04 E-value=0.00075 Score=42.95 Aligned_cols=236 Identities=19% Similarity=0.144 Sum_probs=125.7
Q ss_pred HHHHHHHHHHHHHHHCC--HHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCC
Q ss_conf 99999999999997279--5786899994578875460058888632026877358984142035888998789999739
Q gi|254781019|r 51 IVTMAAAAALPIMQNQD--KNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACALVAKS 128 (396)
Q Consensus 51 ~~tmA~~Aa~~~L~~~~--~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i~sg 128 (396)
-..|--+|++.+|++++ ++|||.++-+---. ---.+++..+.|++ +-+-+-.||+-..-+|.+|.-+|..|
T Consensus 51 E~~m~~~A~~~al~Ka~l~~~dId~~~aGDLln---Q~i~ssf~ar~l~i----Pf~GlyGACST~~E~l~laa~~vd~g 123 (329)
T pfam07451 51 ESKMLEEAVKLALKKAGLKKDDIDYLLAGDLLN---QIISSSFAARTLGI----PFLGLYGACSTMMESLALAAMLVDGG 123 (329)
T ss_pred HHHHHHHHHHHHHHHCCCCHHHCEEEEECHHHH---HHHHHHHHHHHCCC----CEEEHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 999999999999987499988864895012443---25777788986399----81211356677899999999998466
Q ss_pred CCCEEEEEECCCCC---CCCCCCCCC------C-----CCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCE
Q ss_conf 99769995033201---458887533------4-----783024688426876303531000156786511275887542
Q gi|254781019|r 129 PERKVLIVASDVAR---YDLGSSGEP------T-----QGCGAVAILISSQTSILEIEDITGIYTNDCMDFWRPNYRRTA 194 (396)
Q Consensus 129 ~~~~aLVV~sD~~~---~~~~~~~~~------t-----~GaGA~Allv~~~~~~~~~~~~~~~~~~~~~df~rp~~~~~~ 194 (396)
-.+++|..+|-... .....|-|+ | -|+||+ ++++......+...+.. -+.|+=- .+-.
T Consensus 124 ~A~~vla~tSSH~~tAErQFR~P~EyG~QrpptAqWTVTGaGa~--il~~~~~~p~It~~TiG---kVvD~Gi---~Dp~ 195 (329)
T pfam07451 124 FADYVLAATSSHFASAERQFRFPTEYGGQRPPTAQWTVTGAGAV--LLGKEGDGPRITSATIG---KVVDYGI---KDPN 195 (329)
T ss_pred CHHHEEEEECCCCHHHHHHCCCCHHCCCCCCCCCCEEEECEEEE--EEECCCCCCEEEEEEEE---EEEECCC---CCCC
T ss_conf 54341343144520366542682211677998663788751899--99438998779898778---8876588---8843
Q ss_pred EECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCCHHHHHHHHHHCCHHHHHHHH-------HHHHHHHHHH
Q ss_conf 356601698999999999999999629882110123311454057888886411024544100-------1345554333
Q gi|254781019|r 195 LVDGKYSTKIYLQSLEAVWHDYQKNKGHDFNDFQYFCYHQPFTRMAEKAHIRLSKIVHQNLSV-------AEIEKAIGIT 267 (396)
Q Consensus 195 ~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~~did~~v~H~p~~k~~~~~~~~l~~~~~~~~~~-------~~~e~~~~~~ 267 (396)
.| | .+-..+--..+...++..|.+++|+|.++-- --++..++....|+....-++.. ..+...-++.
T Consensus 196 nM-G----aAMAPAA~dTI~~hf~D~g~~p~dYDlIvTG-DLG~vG~~i~~~Ll~~~g~~i~~~~~DCG~~Iyd~~~Q~v 269 (329)
T pfam07451 196 NM-G----AAMAPAAADTIEQHFQDTGRDPSDYDLIVTG-DLGKVGREIAEDLLKEKGYDISENYQDCGLLIYDNEKQDV 269 (329)
T ss_pred CC-H----HHHHHHHHHHHHHHHHHCCCCHHHCCEEEEC-CHHHHHHHHHHHHHHHCCCCHHHCCCCCCEEEECCCCCCC
T ss_conf 02-5----5564789999999999709992244479966-4488789999999998198844431766768664787765
Q ss_pred HHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCC
Q ss_conf 444532385432338999999997157436988899984079830
Q gi|254781019|r 268 TLYNRLIGNSYTASLYIALISLLDHSSENLAGKRVGFFSYGSGCV 312 (396)
Q Consensus 268 ~~~~~~~GN~~SASi~l~L~slLe~~~~~~~G~rIll~syGsG~~ 312 (396)
.-|-.+.+.--..+.+.|-+.-+...=+|||+.+-|.=+.
T Consensus 270 -----~aGGSGcgCSAvV~~g~il~~m~~g~~krvL~VaTGALlS 309 (329)
T pfam07451 270 -----HAGGSGCGCSAVVLYGYLLKKMKKGELKRVLFVATGALLS 309 (329)
T ss_pred -----CCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCHHCC
T ss_conf -----5787643368999999989999658721899997503138
No 113
>KOG1390 consensus
Probab=97.93 E-value=0.00079 Score=42.80 Aligned_cols=98 Identities=12% Similarity=0.081 Sum_probs=76.3
Q ss_pred CCCHHHHHHHHHHHHHHHCC--HHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHH
Q ss_conf 85999999999999997279--5786899994578875460058888632026877358984142035888998789999
Q gi|254781019|r 48 DEDIVTMAAAAALPIMQNQD--KNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACALV 125 (396)
Q Consensus 48 ~Ed~~tmA~~Aa~~~L~~~~--~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i 125 (396)
.-.+..|+.-|.+.+|+++. +++++-+|++-.-.-...-..+-+..=--||+.++.|.-++-.|.+++-|+.+|..-|
T Consensus 27 sl~A~~Lgsvaikaalera~~~~~~v~eVi~GnVl~AnlGQapaRQaalgAGlp~sv~~tTvNkvCaSgmKAv~laaQsI 106 (396)
T KOG1390 27 SLTATELGSVAIKAALERAVVPPSDVAEVIFGNVLSANLGQAPARQAALGAGLPYSVPATTVNKVCASGMKAVILAAQSI 106 (396)
T ss_pred CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHH
T ss_conf 57625677899999998537987884555410301266676667777762699852146762366665689999998898
Q ss_pred HCCCCCEEEEEECCCCCCCC
Q ss_conf 73999769995033201458
Q gi|254781019|r 126 AKSPERKVLIVASDVARYDL 145 (396)
Q Consensus 126 ~sg~~~~aLVV~sD~~~~~~ 145 (396)
..|....++.-+.|-++..+
T Consensus 107 ~~G~~divVaGGmEsMS~vP 126 (396)
T KOG1390 107 QTGHADIVVAGGMESMSNVP 126 (396)
T ss_pred HCCCCCEEEECCCCHHCCCC
T ss_conf 33876579862502001385
No 114
>pfam00109 ketoacyl-synt Beta-ketoacyl synthase, N-terminal domain. The structure of beta-ketoacyl synthase is similar to that of the thiolase family (pfam00108) and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. The N-terminal domain contains most of the structures involved in dimer formation and also the active site cysteine.
Probab=97.92 E-value=0.00013 Score=47.66 Aligned_cols=87 Identities=22% Similarity=0.224 Sum_probs=65.3
Q ss_pred HHHHHHHHHHHHHCC--HHHCC-----EEEEECCCCCC----------------------CCH-HHHHHHHHHHCCCCCC
Q ss_conf 999999999997279--57868-----99994578875----------------------460-0588886320268773
Q gi|254781019|r 53 TMAAAAALPIMQNQD--KNLID-----TLFFATESSVD----------------------QSK-SAAIWLHKLLGLNSSC 102 (396)
Q Consensus 53 tmA~~Aa~~~L~~~~--~~~Id-----~li~~T~t~~~----------------------~~~-~~a~~v~~~Lgl~~~~ 102 (396)
-+++.|+++||++++ ++.+. .++++|..+.. ..+ ..+.+|...+|+...
T Consensus 78 ~~~~~aa~~Al~dAGl~~~~~~~~~~~gv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~g~~Gp- 156 (243)
T pfam00109 78 RLALEAAWEALEDAGLDPASLRGSDRTGVFVGSGSGDYAELQALDSAGGPRRGSPYLTGAWMPSVAAGRISYRLGLRGP- 156 (243)
T ss_pred HHHHHHHHHHHHHCCCCHHHCCCCCCEEEEEEECCCCHHHHHHHHCCCCCCCCCCEEECCCCCCHHHHHHHHHHCCCCC-
T ss_conf 9999999999998499846727887289999864764899997630367433464110564511788899867415798-
Q ss_pred EEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC
Q ss_conf 589841420358889987899997399976999503320
Q gi|254781019|r 103 RVVELKQACYSATCALHMACALVAKSPERKVLIVASDVA 141 (396)
Q Consensus 103 ~~~Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~ 141 (396)
++-+..||.+++.||..|..+|++|....+|+.++|..
T Consensus 157 -~~t~~~ACaSg~~AI~~A~~~I~~G~~d~~i~Gg~~~~ 194 (243)
T pfam00109 157 -SVTVDTACSSSLVALHAAVRSIRRGECDLALAGGVEAP 194 (243)
T ss_pred -CCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECC
T ss_conf -64665520789999999997533698387999784155
No 115
>PRK12404 stage V sporulation protein AD; Provisional
Probab=97.89 E-value=0.002 Score=40.25 Aligned_cols=235 Identities=12% Similarity=0.079 Sum_probs=126.3
Q ss_pred HHHHHHHHHHHHHHHCC--HHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCC
Q ss_conf 99999999999997279--5786899994578875460058888632026877358984142035888998789999739
Q gi|254781019|r 51 IVTMAAAAALPIMQNQD--KNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACALVAKS 128 (396)
Q Consensus 51 ~~tmA~~Aa~~~L~~~~--~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i~sg 128 (396)
-..|--+|++.+|++++ ++|||.++-+---. ---.+++..+.|++ +-+-+-.||+-..-+|.+|.-+|.+|
T Consensus 54 E~~m~~~A~~~al~Ka~l~~~dId~~~aGDLln---Q~i~ssf~ar~l~i----Pf~GlyGACST~~E~L~laa~~vd~g 126 (334)
T PRK12404 54 HKKLFEEACSRATEKAKLRKDDIQFVLAGDLIN---QITPTSFAARTLGT----PYLGLFGACSTSMEGLALGASIVNAK 126 (334)
T ss_pred HHHHHHHHHHHHHHHCCCCHHHCEEEEECHHHH---HHHHHHHHHHHCCC----CEEEHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 999999999999987499978864896122443---25787788986499----80111356677899999999998466
Q ss_pred CCCEEEEEECCCCC---CCCCCCCCC------C-----CCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCE
Q ss_conf 99769995033201---458887533------4-----783024688426876303531000156786511275887542
Q gi|254781019|r 129 PERKVLIVASDVAR---YDLGSSGEP------T-----QGCGAVAILISSQTSILEIEDITGIYTNDCMDFWRPNYRRTA 194 (396)
Q Consensus 129 ~~~~aLVV~sD~~~---~~~~~~~~~------t-----~GaGA~Allv~~~~~~~~~~~~~~~~~~~~~df~rp~~~~~~ 194 (396)
-.+++|..+|-... .....|-|+ | -|+||+ ++++......+...+. --+.|+=- .+-.
T Consensus 127 ~A~~vla~tSSH~~tAErQFR~P~EyG~QrpptAqWTVTGaGa~--il~~~~~~p~It~~Ti---GkVvD~Gi---~D~~ 198 (334)
T PRK12404 127 GAKYLLTGASSHNTAVEKQFRYPTEYGGQKPPTAQWTVTGAGAA--ILSKTGHGPRVTSATI---GRVVDMGL---TDPF 198 (334)
T ss_pred CHHHEEEEECCCCHHHHHHCCCCHHCCCCCCCCCCEEEECEEEE--EEECCCCCCEEEEEEE---EEEEECCC---CCCC
T ss_conf 54350232044520366542582211677998662788761899--9943899977989877---88876588---8843
Q ss_pred EECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHH--------HHHHHHHH
Q ss_conf 3566016989999999999999996298821101233114540578888864110245441001--------34555433
Q gi|254781019|r 195 LVDGKYSTKIYLQSLEAVWHDYQKNKGHDFNDFQYFCYHQPFTRMAEKAHIRLSKIVHQNLSVA--------EIEKAIGI 266 (396)
Q Consensus 195 ~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~~did~~v~H~p~~k~~~~~~~~l~~~~~~~~~~~--------~~e~~~~~ 266 (396)
.| | .+-..+-...+...++..|.+++|+|.++-- --++..++....|+..-.-++... .+.+. ++
T Consensus 199 nM-G----aAMAPAA~dTI~~hf~D~g~~p~dYDlI~TG-DLG~vG~~i~~~Ll~~~g~~i~~~~~~DCG~~Iy~~~-Q~ 271 (334)
T PRK12404 199 NM-G----GAMAPAAVDTIEAHLRDRQIDASYYDLIVTG-DLGHVGREIAYDLLHKHGTKVTSEQFQDCGLLIYREG-QP 271 (334)
T ss_pred CC-H----HHHHHHHHHHHHHHHHHCCCCHHHCCEEEEC-CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCC-CC
T ss_conf 02-5----5554789999999999709992344579966-4388789999999998198887455376674634689-87
Q ss_pred HHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCC
Q ss_conf 3444532385432338999999997157436988899984079830
Q gi|254781019|r 267 TTLYNRLIGNSYTASLYIALISLLDHSSENLAGKRVGFFSYGSGCV 312 (396)
Q Consensus 267 ~~~~~~~~GN~~SASi~l~L~slLe~~~~~~~G~rIll~syGsG~~ 312 (396)
. .-|-.+.+.--..+.+.+-+.-+...=+|||+.+-|.=+.
T Consensus 272 v-----~aGGSGcgCSA~V~~g~il~~m~~g~~krvL~VaTGALlS 312 (334)
T PRK12404 272 V-----IAGASGPGCSATVVYGHLLNRMKRGELKKILVVATGALLS 312 (334)
T ss_pred C-----CCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCHHCC
T ss_conf 5-----6887653368999999999999648730899997503138
No 116
>COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism]
Probab=97.70 E-value=0.00049 Score=44.12 Aligned_cols=96 Identities=19% Similarity=0.157 Sum_probs=74.3
Q ss_pred HHHHHHHHHHHHHH----HCCHHHCCEEEEECCCCCC-CCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHH
Q ss_conf 99999999999997----2795786899994578875-460058888632026877358984142035888998789999
Q gi|254781019|r 51 IVTMAAAAALPIMQ----NQDKNLIDTLFFATESSVD-QSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACALV 125 (396)
Q Consensus 51 ~~tmA~~Aa~~~L~----~~~~~~Id~li~~T~t~~~-~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i 125 (396)
...++....+..++ +.++.+|+-+++++..+.. ...-.+-++...+|++.+.+++.++.+|.++..|+..|+..|
T Consensus 27 ~e~l~~a~~~a~~~~~~~~vd~~~v~~vi~G~~~~~g~~~~~~ar~~a~~aGl~~~~p~~~V~~~c~SG~~Av~~A~~~I 106 (392)
T COG0183 27 AEALGAALIDAGLERAPADVDAADVDDVILGCVLQAGEQGQNIARQAALAAGLPGSVPAVTVNRACASGLAAVRLAAQAI 106 (392)
T ss_pred HHHHHHHHHHHHHHHCCCCCCHHHHHHEEECCCCCHHHCCCCHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHH
T ss_conf 99999999997644222049855410214401341100335388999998599989870899645711999999999999
Q ss_pred HCCCCCEEEEEECCCCCCCCC
Q ss_conf 739997699950332014588
Q gi|254781019|r 126 AKSPERKVLIVASDVARYDLG 146 (396)
Q Consensus 126 ~sg~~~~aLVV~sD~~~~~~~ 146 (396)
++|....+|+++.|.++..+.
T Consensus 107 ~sG~~dvvlagG~E~mS~~~~ 127 (392)
T COG0183 107 ASGEADVVLAGGVEKMSDAPM 127 (392)
T ss_pred HCCCCCEEEEEEECCCCCCCC
T ss_conf 779988899985611456876
No 117
>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.65 E-value=0.0031 Score=39.12 Aligned_cols=172 Identities=18% Similarity=0.224 Sum_probs=104.4
Q ss_pred HHHHHHHHHHHHCC--HHHCC----EEEEECCCCCCCCHH-------------------HHHHHHHHHCCCCCCEEEEEC
Q ss_conf 99999999997279--57868----999945788754600-------------------588886320268773589841
Q gi|254781019|r 54 MAAAAALPIMQNQD--KNLID----TLFFATESSVDQSKS-------------------AAIWLHKLLGLNSSCRVVELK 108 (396)
Q Consensus 54 mA~~Aa~~~L~~~~--~~~Id----~li~~T~t~~~~~~~-------------------~a~~v~~~Lgl~~~~~~~Di~ 108 (396)
|-.+.+-++|++++ |..+. -|+.+..+..|.... ++..|...|++.. +.+.+.
T Consensus 94 llLe~aw~AlEdAG~~~~~l~g~~tgV~~g~~~~~y~~~~~~~~~~~~~~~~~g~~~~~~a~Risy~l~l~G--Ps~~vd 171 (1061)
T COG3321 94 LLLEVAWEALEDAGIYPDSLRGSATGVFAGASVADYLLLLLADDEAEPEYAITGNSSSVAAGRISYVLGLSG--PSVTVD 171 (1061)
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHCCCHHEEECCC--CCCCCC
T ss_conf 999999999997599922256742489965656664442322212355221025422021010122043457--854222
Q ss_pred CCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC-----CC---------------C-CCCCCCCCCCCEEEEEECCC--
Q ss_conf 4203588899878999973999769995033201-----45---------------8-88753347830246884268--
Q gi|254781019|r 109 QACYSATCALHMACALVAKSPERKVLIVASDVAR-----YD---------------L-GSSGEPTQGCGAVAILISSQ-- 165 (396)
Q Consensus 109 ~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~-----~~---------------~-~~~~~~t~GaGA~Allv~~~-- 165 (396)
.+|++...|+++|+..+++|...-+|+=+....- +. + .+++=+..|.|+.++++.+-
T Consensus 172 taCSSsLvAvhlA~~sL~~Ge~d~alaGgv~l~~~p~~~~~~~~~g~ls~~g~c~~fd~~adG~v~geG~g~vvLKrl~~ 251 (1061)
T COG3321 172 TACSSSLVAVHLACQSLRLGECDLALAGGVNLVLSPESSYLFSAGGMLSPDGRCKAFDADADGYVRGEGAGVVVLKRLSD 251 (1061)
T ss_pred CHHHHHHHHHHHHHHHHHCCCCCHHHCCCEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEHHH
T ss_conf 36767899999999987548720132022210358604443443035586677578755578668721468998625887
Q ss_pred -----CCCCEEEECCCCCCCC-CCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCCHH
Q ss_conf -----7630353100015678-6511275887542356601698999999999999999629882110123311454057
Q gi|254781019|r 166 -----TSILEIEDITGIYTND-CMDFWRPNYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHDFNDFQYFCYHQPFTRM 239 (396)
Q Consensus 166 -----~~~~~~~~~~~~~~~~-~~df~rp~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~~did~~v~H~p~~k~ 239 (396)
+++......++..... ...+..|+ .+.-...+++.+++.++++++|+|+=-|..+..+
T Consensus 252 A~~dgd~IyavI~gsavn~dG~~~gltaP~----------------~~aQ~~v~~~al~~a~i~p~tv~yvEaHgTGT~l 315 (1061)
T COG3321 252 AERDGDRIYAVIRGSAVNQDGRSNGLTAPN----------------LEAQADVIREALADAGIDPATVQYVEAHGTGTPL 315 (1061)
T ss_pred HHHCCCEEEEEEEEEEEECCCCCCCCCCCC----------------HHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCC
T ss_conf 875799179999502550577656744788----------------8899999999998559990335167611477656
Q ss_pred HHHH
Q ss_conf 8888
Q gi|254781019|r 240 AEKA 243 (396)
Q Consensus 240 ~~~~ 243 (396)
..-.
T Consensus 316 GDpi 319 (1061)
T COG3321 316 GDPI 319 (1061)
T ss_pred CCHH
T ss_conf 4789
No 118
>KOG1394 consensus
Probab=97.31 E-value=0.0039 Score=38.52 Aligned_cols=178 Identities=17% Similarity=0.167 Sum_probs=104.8
Q ss_pred HHHHHHHHHHHHHHHCCH-----HHCCE----EEEECCCCC---------------------CCCHH-----HHHHHHHH
Q ss_conf 999999999999972795-----78689----999457887---------------------54600-----58888632
Q gi|254781019|r 51 IVTMAAAAALPIMQNQDK-----NLIDT----LFFATESSV---------------------DQSKS-----AAIWLHKL 95 (396)
Q Consensus 51 ~~tmA~~Aa~~~L~~~~~-----~~Id~----li~~T~t~~---------------------~~~~~-----~a~~v~~~ 95 (396)
..-+|+.|++++|++++. ++.|. +.++|.-+. ++.|- .+.+|.-.
T Consensus 94 ~~~~al~aa~eAL~da~~~~~~~~e~dk~~~GV~iGtgmg~l~~i~e~a~~~~~~g~rrvsPffVPkil~NM~ag~vsm~ 173 (440)
T KOG1394 94 FTKLALTAAEEALKDAGLLDVNLSEEDKEKTGVLIGTGMGDLEDIYETAQNLSEKGYRRVSPFFVPKILTNMAAGYVSMK 173 (440)
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCHHHHH
T ss_conf 89999999999997368888641245544104585146332999999999998722343386300066503651033453
Q ss_pred HCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC---------------CCCC---CC-------
Q ss_conf 0268773589841420358889987899997399976999503320145---------------8887---53-------
Q gi|254781019|r 96 LGLNSSCRVVELKQACYSATCALHMACALVAKSPERKVLIVASDVARYD---------------LGSS---GE------- 150 (396)
Q Consensus 96 Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~---------------~~~~---~~------- 150 (396)
+|+.. +...++-||.-+..++-.|..+|+.|.....|.=++|.+--. -+++ .|
T Consensus 174 ~gl~G--pnhsvSTACATg~h~igda~n~Ir~GdaDvmlAGgsE~~I~PlslaGF~r~RALSt~nd~P~~aSRPfD~~Rd 251 (440)
T KOG1394 174 YGLRG--PNHSVSTACATGNHCIGDAFNFIRLGDADVMLAGGSEACINPLSLAGFSRARALSTRNDNPQKASRPFDKKRD 251 (440)
T ss_pred HCCCC--CCHHHHHHHHHCCCHHHHHHHHHHHCCCCEEECCCCCEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
T ss_conf 15767--7616676665143058888878870765455226753000522234378877764158993103788866777
Q ss_pred -CCCCCCEEEEEECC-------CCCCCEEEECCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf -34783024688426-------8763035310001567865112758875423566016989999999999999996298
Q gi|254781019|r 151 -PTQGCGAVAILISS-------QTSILEIEDITGIYTNDCMDFWRPNYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGH 222 (396)
Q Consensus 151 -~t~GaGA~Allv~~-------~~~~~~~~~~~~~~~~~~~df~rp~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~ 222 (396)
|-.|-||.+++++. .+.|.+.....+. +.|.+..--|. -||. ....|+++.++.+|+
T Consensus 252 GFVmGEGagvlvlEelEHA~~RgA~I~AE~lGygl-s~Da~HiT~P~------~dG~--------Ga~~am~raL~~Agl 316 (440)
T KOG1394 252 GFVMGEGAGVLVLEELEHAKKRGAPIYAEVLGYGL-SSDAYHITSPD------PDGA--------GAVLAMERALKDAGL 316 (440)
T ss_pred CEEECCCEEEEEHHHHHHHHHCCCCEEHHHHCCCC-CCCCCCCCCCC------CCCC--------HHHHHHHHHHHHCCC
T ss_conf 35650660587618678898749915277645752-56634347899------8730--------589999999987499
Q ss_pred CHHHCCEEEECCCCCHHHHHHHH
Q ss_conf 82110123311454057888886
Q gi|254781019|r 223 DFNDFQYFCYHQPFTRMAEKAHI 245 (396)
Q Consensus 223 ~~~did~~v~H~p~~k~~~~~~~ 245 (396)
+++||+|+--|..+..+.+.+..
T Consensus 317 ~pe~i~YvNAHATST~~GD~aE~ 339 (440)
T KOG1394 317 SPEDIDYVNAHATSTPLGDAAEA 339 (440)
T ss_pred CHHHCCEEECCCCCCCCCHHHHH
T ss_conf 95655705303335767308999
No 119
>KOG1389 consensus
Probab=97.21 E-value=0.014 Score=35.12 Aligned_cols=92 Identities=14% Similarity=0.131 Sum_probs=70.8
Q ss_pred HHHHHHHHHHHHHHH--CCHHHCCEEEEECCCCCCCCHHHHHHHHHHH-CCCCCCEEEEECCCHHHHHHHHHHHHHHHHC
Q ss_conf 999999999999972--7957868999945788754600588886320-2687735898414203588899878999973
Q gi|254781019|r 51 IVTMAAAAALPIMQN--QDKNLIDTLFFATESSVDQSKSAAIWLHKLL-GLNSSCRVVELKQACYSATCALHMACALVAK 127 (396)
Q Consensus 51 ~~tmA~~Aa~~~L~~--~~~~~Id~li~~T~t~~~~~~~~a~~v~~~L-gl~~~~~~~Di~~aC~g~~~AL~~A~~~i~s 127 (396)
+-.|-..+.+..+++ .+|+.|+-++++|.-.+.. -.+.+.+...+ |.+...+..-++-.|++|+.|......-|++
T Consensus 61 pDeLl~~vl~a~ie~t~~dp~~igdi~vG~vL~pg~-ga~e~R~a~~~ag~P~tvpv~tvNRqCsSGLqaVadiA~~Ir~ 139 (435)
T KOG1389 61 PDELLAAVLRAVIEKTNLDPSLIGDIVVGTVLAPGS-GASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADIAAKIRA 139 (435)
T ss_pred HHHHHHHHHHHHHHHCCCCHHHHCCEEEEECCCCCC-CHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 289999999999765189978950135521037775-3689889999718986560256643421477899999988744
Q ss_pred CCCCEEEEEECCCCCC
Q ss_conf 9997699950332014
Q gi|254781019|r 128 SPERKVLIVASDVARY 143 (396)
Q Consensus 128 g~~~~aLVV~sD~~~~ 143 (396)
|.+.-.|-.+-|.++.
T Consensus 140 G~ydIGla~GvESMt~ 155 (435)
T KOG1389 140 GFYDIGLAAGVESMTT 155 (435)
T ss_pred CCEEEECCCCHHHHCC
T ss_conf 8366300135112103
No 120
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=97.03 E-value=0.015 Score=34.77 Aligned_cols=106 Identities=22% Similarity=0.219 Sum_probs=76.4
Q ss_pred HHHCCCCEEEECCCCC--CHHHHHHHHHHHHHHHCC---HHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEEC
Q ss_conf 6303832466559985--999999999999997279---57868999945788754600588886320268773589841
Q gi|254781019|r 34 YVGIGQERMSVLNPDE--DIVTMAAAAALPIMQNQD---KNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELK 108 (396)
Q Consensus 34 ~~~lGi~~r~v~~~~E--d~~tmA~~Aa~~~L~~~~---~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~ 108 (396)
..|.||-..+.-++++ .++.|..+|++.|+++++ .+.||.|.+.-.-. ...+-..-.|+++||+.+. .++-..
T Consensus 10 IVGvGqi~qr~~d~~~~~ePl~Lm~~A~~~A~~DaG~~l~~~IDsI~VVr~~s-w~y~np~~~lA~rLG~~pa-~~~~t~ 87 (502)
T PRK08257 10 IVGVGQVTDRPDDPARGLEPVDLMAAAARAAAADAGADLLEAIDSVAVVNQLS-WRYRNPPGLLAERLGADPA-RTVYGP 87 (502)
T ss_pred EEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHCCEEEEECCCC-CCCCCHHHHHHHHCCCCCC-CEEEEC
T ss_conf 99523103168872014799999999999999860820587597898513225-6479989999997399977-579836
Q ss_pred CCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC
Q ss_conf 420358889987899997399976999503320
Q gi|254781019|r 109 QACYSATCALHMACALVAKSPERKVLIVASDVA 141 (396)
Q Consensus 109 ~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~ 141 (396)
.+-..=-.-+.-+..-|.+|..+-+||+++|..
T Consensus 88 ~GGn~PQ~LVneaa~rIa~Ge~~~aLI~GgEA~ 120 (502)
T PRK08257 88 VGGNSPQRLVNEAALRIARGEADVVLVAGAEAQ 120 (502)
T ss_pred CCCCCHHHHHHHHHHHHHCCCCCEEEEECHHHH
T ss_conf 998368999999999997688547999744069
No 121
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=96.87 E-value=0.034 Score=32.61 Aligned_cols=160 Identities=14% Similarity=0.028 Sum_probs=92.9
Q ss_pred HHHHHHHHHHHHHHCCH-------HHCCEEEEECCCC-----------------CCC------------CH---------
Q ss_conf 99999999999972795-------7868999945788-----------------754------------60---------
Q gi|254781019|r 52 VTMAAAAALPIMQNQDK-------NLIDTLFFATESS-----------------VDQ------------SK--------- 86 (396)
Q Consensus 52 ~tmA~~Aa~~~L~~~~~-------~~Id~li~~T~t~-----------------~~~------------~~--------- 86 (396)
..|++.|++.+|++++. +.++++ +++..+ .+. .|
T Consensus 74 ~~~a~~AA~~Al~dAGl~~~~~~~~~~gv~-vgsg~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~P~~~~~~l~n 152 (397)
T PRK06519 74 QRLGTYAAGLALDDAGIKGNEEICSTMDMI-VAAGGGERDIAVDTAILNEARKGNDRGGLLNERLMTELRPTLFLAQLSN 152 (397)
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCEE-EEECCCCCCEEEEEEEECCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHH
T ss_conf 999999999999967999870010465679-9953666530442221024443345620333214566782688988776
Q ss_pred HHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC---------------CCCCC---
Q ss_conf 058888632026877358984142035888998789999739997699950332014---------------58887---
Q gi|254781019|r 87 SAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACALVAKSPERKVLIVASDVARY---------------DLGSS--- 148 (396)
Q Consensus 87 ~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~---------------~~~~~--- 148 (396)
..+..|.-.+|+... .+-+..||.+++.|+-.|..+|+.|....+|+-++|-+.. ....+
T Consensus 153 ~~a~~isi~~g~~Gp--~~tv~tACASg~~AIg~A~~~Ir~G~aDv~iaGGae~~~~p~~~~~~~~~~~~s~~~~~P~~a 230 (397)
T PRK06519 153 LLAGNISIVHKVTGS--SRTFMGEEGAGVSAIRIALARIASGQSTHALVGGAYNAERKDMLLLYELGGLLLKDGWAPVWS 230 (397)
T ss_pred HHHHHHHHHHCCCCC--CCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 289999998378876--654026038899999999999977998889986201333728999999733434799992224
Q ss_pred ----CC--CCCCCCEEEEEECCC-------CCCCEEEECCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHH
Q ss_conf ----53--347830246884268-------76303531000156786511275887542356601698999999999999
Q gi|254781019|r 149 ----GE--PTQGCGAVAILISSQ-------TSILEIEDITGIYTNDCMDFWRPNYRRTALVDGKYSTKIYLQSLEAVWHD 215 (396)
Q Consensus 149 ----~~--~t~GaGA~Allv~~~-------~~~~~~~~~~~~~~~~~~df~rp~~~~~~~~dg~~~~~~y~~~~~~a~~~ 215 (396)
++ +-.|-||+.+++++. .++......++. + . .+..+|. +..+.+.
T Consensus 231 ~~~~dR~GfVlGEGAa~LVLE~~ehA~aRGA~IyaEi~G~g~---~---~-------~~~~~g~---------~~~~~~~ 288 (397)
T PRK06519 231 RKGSAGGGFILGSGGAFLVLESREHAEARGARPYARLSGVVS---D---R-------ARRSPGD---------VEASLER 288 (397)
T ss_pred CCCCCCCCEEECCCEEEEEECCHHHHHHCCCEEEEEEEEEEC---C---C-------CCCCCCH---------HHHHHHH
T ss_conf 897567973541663899973587898589926899976405---8---8-------8999808---------9999999
Q ss_pred HHHHCCCCHHHCCEEEECCCCC
Q ss_conf 9996298821101233114540
Q gi|254781019|r 216 YQKNKGHDFNDFQYFCYHQPFT 237 (396)
Q Consensus 216 ~l~~~g~~~~did~~v~H~p~~ 237 (396)
.++..++..++ ++++-|..+.
T Consensus 289 al~~ag~~~~~-~~~~~~~tgt 309 (397)
T PRK06519 289 LWSAAGGLAAP-TAVISGATGA 309 (397)
T ss_pred HHHHCCCCCCC-EEEECCCCCC
T ss_conf 99867999757-4898489888
No 122
>KOG1406 consensus
Probab=96.54 E-value=0.0086 Score=36.35 Aligned_cols=91 Identities=15% Similarity=0.210 Sum_probs=66.1
Q ss_pred CCCHHHHHHHHHHHHHHHCCH--HHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHH
Q ss_conf 859999999999999972795--786899994578875460058888632026877358984142035888998789999
Q gi|254781019|r 48 DEDIVTMAAAAALPIMQNQDK--NLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACALV 125 (396)
Q Consensus 48 ~Ed~~tmA~~Aa~~~L~~~~~--~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i 125 (396)
+-|--+|+-+|..++|++++. ++|+--.++-.-++-.--.-|.| .+|+. .++.+.++++|..+..||.+|...|
T Consensus 26 ~~dypd~a~ea~tkal~da~ikys~vqqa~vgyvfgdstcgqraiy---evgmt-gipi~nvnnncatgssalflakqii 101 (408)
T KOG1406 26 DWDYPDFAKEAITKALQDAGIKYSEVQQAVVGYVFGDSTCGQRAIY---EVGMT-GIPIYNVNNNCATGSSALFLAKQII 101 (408)
T ss_pred CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHEEEECCCCCCHHHHH---HCCCC-CCCEEECCCCCCCCCHHHHHHHHHH
T ss_conf 8867078999999888862997799876641245258753067888---70466-7624623675356704889999998
Q ss_pred HCCCCCEEEEEECCCCC
Q ss_conf 73999769995033201
Q gi|254781019|r 126 AKSPERKVLIVASDVAR 142 (396)
Q Consensus 126 ~sg~~~~aLVV~sD~~~ 142 (396)
++|...-+|..+=|.+.
T Consensus 102 esgn~dcvlalgfekm~ 118 (408)
T KOG1406 102 ESGNSDCVLALGFEKME 118 (408)
T ss_pred HCCCCCEEEEECHHHCC
T ss_conf 65775358761302307
No 123
>KOG1202 consensus
Probab=95.66 E-value=0.051 Score=31.56 Aligned_cols=179 Identities=14% Similarity=0.157 Sum_probs=100.2
Q ss_pred HHHHHHHHHHHHHHHCC--HHHCCE----EEE---ECCCCCCC--CHHH-HHH-----HHHHHCCCCCCEEEE-------
Q ss_conf 99999999999997279--578689----999---45788754--6005-888-----863202687735898-------
Q gi|254781019|r 51 IVTMAAAAALPIMQNQD--KNLIDT----LFF---ATESSVDQ--SKSA-AIW-----LHKLLGLNSSCRVVE------- 106 (396)
Q Consensus 51 ~~tmA~~Aa~~~L~~~~--~~~Id~----li~---~T~t~~~~--~~~~-a~~-----v~~~Lgl~~~~~~~D------- 106 (396)
-+-|-.++...++-+++ |+++.- +.+ ++||.-.. .|.+ ..| +-.++ .++-..+||
T Consensus 87 ~lRlLLE~t~EAivDaGiNP~dLRGsrTGV~vG~S~sETs~~l~~d~dtv~GY~ltGC~RaMf-aNRiSytFDf~GPSfs 165 (2376)
T KOG1202 87 QLRLLLEATWEAIVDAGINPDDLRGSRTGVFVGVSGSETSGALSQDPDTVNGYSMTGCVRAMF-ANRISYTFDFQGPSFS 165 (2376)
T ss_pred HHHHHHHHHHHHHHHCCCCHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEHHHHHHHH-HCCEEEEEECCCCCEE
T ss_conf 999999988999983688866637644317997355434432247986003310147789986-3340589953688345
Q ss_pred ECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCC-----------------CCCCCCCCC----CCEEEEEECCC
Q ss_conf 414203588899878999973999769995033201458-----------------887533478----30246884268
Q gi|254781019|r 107 LKQACYSATCALHMACALVAKSPERKVLIVASDVARYDL-----------------GSSGEPTQG----CGAVAILISSQ 165 (396)
Q Consensus 107 i~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~~-----------------~~~~~~t~G----aGA~Allv~~~ 165 (396)
+..||++.+.||++|.+-|++|+...+||-++....... ...++...| +|.+|+++.+.
T Consensus 166 vDTACSSSL~ALq~A~~~ir~Gqcd~AiVaG~~liLkPt~slQFlRLgmls~dGsCkaFDeagnGY~Rseg~~avllqrk 245 (2376)
T KOG1202 166 VDTACSSSLMALQNAFQDIRSGQCDAAIVAGANLILKPTTSLQFLRLGMLSPDGSCKAFDEAGNGYCRSEGVVAVLLQRK 245 (2376)
T ss_pred EECHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCEEECCCHHHHHHHHCCCCCCCCCCCHHCCCCCEEECCCEEEEEEEHH
T ss_conf 51245688999999999986468846641056257544145677874375889861001003782351275699987445
Q ss_pred CCCCEEEECCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCCHHHH
Q ss_conf 7630353100015678651127588754235660169899999999999999962988211012331145405788
Q gi|254781019|r 166 TSILEIEDITGIYTNDCMDFWRPNYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHDFNDFQYFCYHQPFTRMAE 241 (396)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~df~rp~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~~did~~v~H~p~~k~~~ 241 (396)
......- .+..+..--.|-++..+-.||.-+ .-.+.+++.-.+.|+.++++-|+=-|-.+.|..+
T Consensus 246 ~~ArRvY-AtilnartNTDGfKEqGvTfP~G~----------~Q~qLi~e~Yse~Gl~P~sv~YvEAHGtGTkVGD 310 (2376)
T KOG1202 246 SLARRVY-ATILNARTNTDGFKEQGVTFPSGD----------MQEQLIRETYSEAGLNPESVVYVEAHGTGTKVGD 310 (2376)
T ss_pred HHHHHHH-HHHHCCCCCCCCHHHCCCCCCCCH----------HHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCC
T ss_conf 7787888-875204557874221386578807----------9999999999861989232799972167787799
No 124
>KOG1391 consensus
Probab=94.89 E-value=0.083 Score=30.23 Aligned_cols=94 Identities=14% Similarity=0.183 Sum_probs=71.7
Q ss_pred CCHHHHHHHHHHHHHHHC--CHHHCCEEEEECCCCCCCCHHHHHHHHHHHCC----CCCCEEEEECCCHHHHHHHHHHHH
Q ss_conf 599999999999999727--95786899994578875460058888632026----877358984142035888998789
Q gi|254781019|r 49 EDIVTMAAAAALPIMQNQ--DKNLIDTLFFATESSVDQSKSAAIWLHKLLGL----NSSCRVVELKQACYSATCALHMAC 122 (396)
Q Consensus 49 Ed~~tmA~~Aa~~~L~~~--~~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl----~~~~~~~Di~~aC~g~~~AL~~A~ 122 (396)
-..-+|.+.|++.+|+.+ +++.+|.+|++-.- .+-+-..|+.+..|| +.+.+++-++--|.++..++.++.
T Consensus 26 ~~aTdL~~~AakAAL~aa~v~~e~VD~VI~GNV~---aSSsDgIYl~RHvGL~~GvP~e~pALtiNRLCGSGFQsiVNga 102 (396)
T KOG1391 26 LSATDLGVVAAKAALKAANVGAEAVDHVIMGNVL---ASSSDGIYLARHVGLRVGVPKETPALTINRLCGSGFQSIVNGA 102 (396)
T ss_pred CCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEEEE---ECCCCCEEEEECCCCCCCCCCCCCCEEEHHHHCCCHHHHHHHH
T ss_conf 5444678899998886438883233258871134---1257726754003532278676673343013131279898667
Q ss_pred HHHHCCCCCEEEEEECCCCCCCC
Q ss_conf 99973999769995033201458
Q gi|254781019|r 123 ALVAKSPERKVLIVASDVARYDL 145 (396)
Q Consensus 123 ~~i~sg~~~~aLVV~sD~~~~~~ 145 (396)
.-|.-+..+-+|.=++|.++..+
T Consensus 103 Q~I~vgea~ivL~GGtEnMSq~P 125 (396)
T KOG1391 103 QEICVGEAEIVLCGGTENMSQAP 125 (396)
T ss_pred HHHHCCCCEEEEECCCCCCCCCC
T ss_conf 77630761599844745234586
No 125
>KOG1392 consensus
Probab=92.93 E-value=0.17 Score=28.31 Aligned_cols=91 Identities=15% Similarity=0.173 Sum_probs=62.7
Q ss_pred CCHHHHHHHHHHHHHHHC--CHHHCCEEEEECCCCCCCCHHHHHHHHHH-HCCCCCCEEEEECCCHHHHHHHHHHHHHHH
Q ss_conf 599999999999999727--95786899994578875460058888632-026877358984142035888998789999
Q gi|254781019|r 49 EDIVTMAAAAALPIMQNQ--DKNLIDTLFFATESSVDQSKSAAIWLHKL-LGLNSSCRVVELKQACYSATCALHMACALV 125 (396)
Q Consensus 49 Ed~~tmA~~Aa~~~L~~~--~~~~Id~li~~T~t~~~~~~~~a~~v~~~-Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i 125 (396)
--+.+++-+|.+.+|++. ..+.||.|||+|.--.-. -|+-..-+.+ -|.+...++--++.+|-+.-.|+.+...+|
T Consensus 64 lmphdlar~al~~ll~kt~lpke~~dyii~gtviqevk-tsniareaal~agfsdktpahtvtmacissn~amttgmgli 142 (465)
T KOG1392 64 LMPHDLAREALKALLEKTKLPKEQLDYIICGTVIQEVK-TSNIAREAALLAGFSDKTPAHTVTMACISSNVAMTTGMGLI 142 (465)
T ss_pred HCHHHHHHHHHHHHHHHCCCCHHHHCEEEEHHHHHHHH-CCHHHHHHHHHCCCCCCCCCCEEEEEHHCCCHHHHCCCEEE
T ss_conf 06058899999999875259888833453034577775-01288899986589888864156521010351433062057
Q ss_pred HCCCCCEEEEEECCC
Q ss_conf 739997699950332
Q gi|254781019|r 126 AKSPERKVLIVASDV 140 (396)
Q Consensus 126 ~sg~~~~aLVV~sD~ 140 (396)
++|....++.=+.|.
T Consensus 143 atg~~dvivaggvel 157 (465)
T KOG1392 143 ATGNADVIVAGGVEL 157 (465)
T ss_pred EECCCCEEEECCEEE
T ss_conf 507767798756554
No 126
>pfam02803 Thiolase_C Thiolase, C-terminal domain. Thiolase is reported to be structurally related to beta-ketoacyl synthase (pfam00109), and also chalcone synthase.
Probab=91.41 E-value=1 Score=23.51 Aligned_cols=87 Identities=17% Similarity=0.178 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHHHHCCCCHHHCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH---H
Q ss_conf 9999999999999629882110123311454057888886411024544100134555433344453238543233---8
Q gi|254781019|r 206 LQSLEAVWHDYQKNKGHDFNDFQYFCYHQPFTRMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTAS---L 282 (396)
Q Consensus 206 ~~~~~~a~~~~l~~~g~~~~did~~v~H~p~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SAS---i 282 (396)
...--.+++.+++++|++++|+|+|=+|-+|.-......+.+.... +++++.--.. -+|+-..|| +
T Consensus 21 ~~ap~~A~~~lL~r~gl~~~Did~~EinEAFA~~~l~~~~~l~id~----------ekvN~~GGai-AlGHP~GaSGarl 89 (123)
T pfam02803 21 GIGPAYAIPKALKKAGLTVNDIDLFEINEAFAAQALAVAKDLGIDP----------EKVNVNGGAI-ALGHPLGASGARI 89 (123)
T ss_pred CCCHHHHHHHHHHHCCCCHHHCCEEEECHHHHHHHHHHHHHCCCCC----------CCCCCCCCCH-HHCCCCCCCHHHH
T ss_conf 1369999999999829985546645641456777899999719892----------0148988734-4278846624899
Q ss_pred HHHHHHHHHHCCCCCCCCEEEEEEEC
Q ss_conf 99999999715743698889998407
Q gi|254781019|r 283 YIALISLLDHSSENLAGKRVGFFSYG 308 (396)
Q Consensus 283 ~l~L~slLe~~~~~~~G~rIll~syG 308 (396)
-+.|...|.+ .|.+.++.+-.
T Consensus 90 v~~l~~~L~~-----~~~~~G~as~C 110 (123)
T pfam02803 90 LVTLLHELKR-----RGGKYGLATLC 110 (123)
T ss_pred HHHHHHHHHH-----HCCCEEEEEEE
T ss_conf 9999999998-----39999999970
No 127
>pfam02801 Ketoacyl-synt_C Beta-ketoacyl synthase, C-terminal domain. The structure of beta-ketoacyl synthase is similar to that of the thiolase family (pfam00108) and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=91.02 E-value=0.59 Score=24.95 Aligned_cols=79 Identities=16% Similarity=0.079 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHHHCCCCHHHCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
Q ss_conf 99999999999962988211012331145405788888641102454410013455543334445323854323389999
Q gi|254781019|r 207 QSLEAVWHDYQKNKGHDFNDFQYFCYHQPFTRMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIAL 286 (396)
Q Consensus 207 ~~~~~a~~~~l~~~g~~~~did~~v~H~p~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L 286 (396)
+...+++++.+++.|++++||+|+-.|-...+..+....+-......+.. +.+ +....=..+|++..||=.+.|
T Consensus 25 ~~~~~~i~~Al~~agi~p~~I~~i~aHgtgT~~gD~~E~~ai~~~f~~~~-----~~~-~i~S~Ks~~GH~~~AsG~~~l 98 (117)
T pfam02801 25 PAQARAIRAALADAGLDPEDVDYVEAHGTGTPLGDPIEAEALKAVFGPGR-----RPL-PVGSVKSNIGHLEAAAGVAGL 98 (117)
T ss_pred HHHHHHHHHHHHHHCCCHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCC-----CCC-CCCCCCCCCCCCHHHHHHHHH
T ss_conf 99999999999990989989798987537685437999999999966377-----887-677741153556376799999
Q ss_pred HHHHH
Q ss_conf 99997
Q gi|254781019|r 287 ISLLD 291 (396)
Q Consensus 287 ~slLe 291 (396)
...+.
T Consensus 99 i~~~l 103 (117)
T pfam02801 99 IKAVL 103 (117)
T ss_pred HHHHH
T ss_conf 99999
No 128
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase; InterPro: IPR012793 Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.; GO: 0016747 transferase activity transferring groups other than amino-acyl groups, 0019619 protocatechuate catabolic process.
Probab=75.31 E-value=5.7 Score=18.83 Aligned_cols=90 Identities=17% Similarity=0.217 Sum_probs=62.9
Q ss_pred HHHHHHHHHHHHHC---CHHHCCEEEEECCCCCCCC-HHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCC
Q ss_conf 99999999999727---9578689999457887546-0058888632026877358984142035888998789999739
Q gi|254781019|r 53 TMAAAAALPIMQNQ---DKNLIDTLFFATESSVDQS-KSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACALVAKS 128 (396)
Q Consensus 53 tmA~~Aa~~~L~~~---~~~~Id~li~~T~t~~~~~-~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i~sg 128 (396)
+|++--.+.++.+. +...||-++++...---.. ...+-+-.=+-|++..+...-++--|.+++.|+..+..-|++|
T Consensus 27 ~l~a~P~~~l~~~~~~~~~~~~d~v~~G~anqaGednrnvarm~~llaGlP~~v~~~t~nrlC~s~lda~~~~~ra~~~G 106 (400)
T TIGR02430 27 DLAAVPIKALLARNPSLDAAAIDDVILGCANQAGEDNRNVARMAALLAGLPVSVPGTTVNRLCGSGLDAIGLAARAIKAG 106 (400)
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 02233699998532202656531443123211351035799999997068641101456665421378999988876327
Q ss_pred CCCEEEEEECCCCC
Q ss_conf 99769995033201
Q gi|254781019|r 129 PERKVLIVASDVAR 142 (396)
Q Consensus 129 ~~~~aLVV~sD~~~ 142 (396)
....++.=+.|..+
T Consensus 107 ~~~l~iaGGvesms 120 (400)
T TIGR02430 107 EADLVIAGGVESMS 120 (400)
T ss_pred CCCEEEECCCHHHC
T ss_conf 64357764721120
No 129
>pfam01135 PCMT Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT).
Probab=66.90 E-value=8.1 Score=17.86 Aligned_cols=42 Identities=31% Similarity=0.262 Sum_probs=28.4
Q ss_pred CCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEE
Q ss_conf 3854323389999999971574369888999840798303778
Q gi|254781019|r 274 IGNSYTASLYIALISLLDHSSENLAGKRVGFFSYGSGCVAEFF 316 (396)
Q Consensus 274 ~GN~~SASi~l~L~slLe~~~~~~~G~rIll~syGsG~~a~~f 316 (396)
+|+--+=|-|...+.+|+. -++++|++||-+|-|||-.+-++
T Consensus 50 i~~~~tis~P~~~a~ml~~-L~l~~g~~VLeIGtGsGY~tAlL 91 (205)
T pfam01135 50 IGYGQTISAPHMHAMMLEL-LELKPGMRVLEIGSGSGYLTACF 91 (205)
T ss_pred CCCCCEECHHHHHHHHHHH-CCCCCCCEEEEECCCCCHHHHHH
T ss_conf 7999888638999999997-07899998999669965999999
No 130
>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed
Probab=64.65 E-value=8.8 Score=17.64 Aligned_cols=38 Identities=29% Similarity=0.206 Sum_probs=25.2
Q ss_pred CCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCE
Q ss_conf 854323389999999971574369888999840798303
Q gi|254781019|r 275 GNSYTASLYIALISLLDHSSENLAGKRVGFFSYGSGCVA 313 (396)
Q Consensus 275 GN~~SASi~l~L~slLe~~~~~~~G~rIll~syGsG~~a 313 (396)
|+--+=|-|...+.+|+. -.+++|++||-.|-|||-.+
T Consensus 56 ~~g~~is~P~~~A~ml~~-L~l~~~~~VLeIGtGsGY~t 93 (213)
T PRK00312 56 GCGQTISQPYMVARMTEL-LELKPGDRVLEIGTGSGYQA 93 (213)
T ss_pred CCCCEECHHHHHHHHHHH-HCCCCCCEEEEECCCCCHHH
T ss_conf 899897679999999998-43689975999659860999
No 131
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=64.21 E-value=9.6 Score=17.42 Aligned_cols=39 Identities=21% Similarity=0.088 Sum_probs=27.8
Q ss_pred CCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCE
Q ss_conf 3854323389999999971574369888999840798303
Q gi|254781019|r 274 IGNSYTASLYIALISLLDHSSENLAGKRVGFFSYGSGCVA 313 (396)
Q Consensus 274 ~GN~~SASi~l~L~slLe~~~~~~~G~rIll~syGsG~~a 313 (396)
+|+--|=|-|...+.+++. -++++|+|||-.|-|||-.+
T Consensus 49 i~~~~tis~P~~~a~ml~~-L~~~~~~~VLeIGtGsGY~t 87 (205)
T PRK13944 49 LFAGATISAPHMVAMMCEL-IEPRPGMKILEVGTGSGYQA 87 (205)
T ss_pred CCCCCEECHHHHHHHHHHH-HCCCCCCEEEEECCCCCHHH
T ss_conf 4899899779999999997-06899998999789851999
No 132
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=63.35 E-value=10 Score=17.24 Aligned_cols=39 Identities=23% Similarity=0.161 Sum_probs=24.5
Q ss_pred CCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEE
Q ss_conf 8543233899999999715743698889998407983037
Q gi|254781019|r 275 GNSYTASLYIALISLLDHSSENLAGKRVGFFSYGSGCVAE 314 (396)
Q Consensus 275 GN~~SASi~l~L~slLe~~~~~~~G~rIll~syGsG~~a~ 314 (396)
|+--+=|-|...+.+|+. -++++|+|||-.|-|||-.+.
T Consensus 54 g~g~tis~P~~~a~ml~~-L~l~~~~~VLeIGtGsGY~tA 92 (214)
T PRK13942 54 GYGQTISAIHMVAIMCEL-LDLDEGQKVLEIGTGSGYHAA 92 (214)
T ss_pred CCCCEECHHHHHHHHHHH-HCCCCCCEEEEECCCCCHHHH
T ss_conf 999788749999999997-279999979996799529999
No 133
>COG3894 Uncharacterized metal-binding protein [General function prediction only]
Probab=63.09 E-value=9.4 Score=17.46 Aligned_cols=70 Identities=17% Similarity=0.226 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHHHCCCCHHHCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
Q ss_conf 99999999999996298821101233114540578888864110245441001345554333444532385432338999
Q gi|254781019|r 206 LQSLEAVWHDYQKNKGHDFNDFQYFCYHQPFTRMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIA 285 (396)
Q Consensus 206 ~~~~~~a~~~~l~~~g~~~~did~~v~H~p~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~ 285 (396)
.-++...+..++++.|+.++|++.+-+--+++..+..-..+..-.+. ... .....+|||+-|--+++
T Consensus 473 kgAirAG~~tL~~kaGie~eDie~~ymAGAfGtyid~~~A~~iGliP------d~~-------~kV~q~GNtslagAr~a 539 (614)
T COG3894 473 KGAIRAGHMTLIEKAGIELEDIERIYMAGAFGTYIDAKKAMVIGLIP------DCD-------LKVKQIGNTSLAGAREA 539 (614)
T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHEEECCCCCCCCCHHHHHEEECCC------CCC-------HHHHHHCCCHHHHHHHH
T ss_conf 88899889999998099755424403214552302656730350567------851-------54654366068889999
Q ss_pred HHH
Q ss_conf 999
Q gi|254781019|r 286 LIS 288 (396)
Q Consensus 286 L~s 288 (396)
|.+
T Consensus 540 Lls 542 (614)
T COG3894 540 LLS 542 (614)
T ss_pred HHC
T ss_conf 856
No 134
>TIGR02446 FadI acetyl-CoA C-acyltransferase FadI; InterPro: IPR012806 This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (2.3.1.16 from EC) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (IPR012802 from INTERPRO). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in Escherichia coli.; GO: 0008415 acyltransferase activity, 0016740 transferase activity, 0006631 fatty acid metabolic process, 0016042 lipid catabolic process.
Probab=62.89 E-value=10 Score=17.19 Aligned_cols=95 Identities=13% Similarity=0.135 Sum_probs=73.3
Q ss_pred CCHHHHHHHHHHHHHHHC--CHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHH
Q ss_conf 599999999999999727--957868999945788754600588886320268773589841420358889987899997
Q gi|254781019|r 49 EDIVTMAAAAALPIMQNQ--DKNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACALVA 126 (396)
Q Consensus 49 Ed~~tmA~~Aa~~~L~~~--~~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i~ 126 (396)
-.+++|+--.+.++|.+. +++-|+-|+|+-.--.-..|.++--+.=--|.+-+..++.++-+|.....+..+...-|-
T Consensus 29 ~~a~dlGkmvv~~ll~r~~~~~~~ieq~v~GqvvqmP~aPniareivlGtGm~~~tdaysv~raCatsfq~~~nvaes~m 108 (430)
T TIGR02446 29 IPAVDLGKMVVSELLARSEIDPKLIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVTRACATSFQSAVNVAESIM 108 (430)
T ss_pred CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCEEECCCCCCHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 64134457889877752167778977766100131577640233421026730001202445677777888998887775
Q ss_pred CCCCCEEEEEECCCCCC
Q ss_conf 39997699950332014
Q gi|254781019|r 127 KSPERKVLIVASDVARY 143 (396)
Q Consensus 127 sg~~~~aLVV~sD~~~~ 143 (396)
+|..+..+.=++|.++.
T Consensus 109 ~G~i~~GiaGGadsssv 125 (430)
T TIGR02446 109 AGAIEIGIAGGADSSSV 125 (430)
T ss_pred HCCEEEEEECCCCCCCC
T ss_conf 15301311046654320
No 135
>PRK13980 NAD synthetase; Provisional
Probab=61.91 E-value=11 Score=17.17 Aligned_cols=119 Identities=19% Similarity=0.153 Sum_probs=65.1
Q ss_pred HHCCCCEEEEC-CCCCCHHHHHHHHHHHHHHHCCHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHH
Q ss_conf 30383246655-99859999999999999972795786899994578875460058888632026877358984142035
Q gi|254781019|r 35 VGIGQERMSVL-NPDEDIVTMAAAAALPIMQNQDKNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYS 113 (396)
Q Consensus 35 ~~lGi~~r~v~-~~~Ed~~tmA~~Aa~~~L~~~~~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g 113 (396)
+..|.+.--+. +-.-|+...|+-|++. .+++.+-.|..-+......+...|-.+++.||+. ...+|+...+.+
T Consensus 24 ~~~g~kg~VlGlSGGIDSavva~La~~A----lg~~~v~~v~mP~~~ss~~s~~dA~~la~~lgi~--~~~i~I~~~~~~ 97 (264)
T PRK13980 24 EKAGFKGVVLGLSGGIDSAVVAYLAVKA----LGKENVLALLMPYRVSPPEDLEDALLVAERLGIE--YKVIEITPIVDA 97 (264)
T ss_pred HHHCCCEEEEECCCCHHHHHHHHHHHHH----CCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCC--EEEEECHHHHHH
T ss_conf 9809980999798688899999999985----4966068998989999887899999999986998--499827999999
Q ss_pred HHHHHHHHHHHHHCC--------------CCCEEEEEECCCCC-CCCCCCCCCCCCCCEEEEE
Q ss_conf 888998789999739--------------99769995033201-4588875334783024688
Q gi|254781019|r 114 ATCALHMACALVAKS--------------PERKVLIVASDVAR-YDLGSSGEPTQGCGAVAIL 161 (396)
Q Consensus 114 ~~~AL~~A~~~i~sg--------------~~~~aLVV~sD~~~-~~~~~~~~~t~GaGA~All 161 (396)
+...+.....+...+ .....||+++...+ +..+..-. +|||++.+.
T Consensus 98 ~~~~~~~~~~~~~~NiqaR~Rm~~Ly~~An~~~~lVlgTgNksE~~~Gy~Tk--yGD~~~d~~ 158 (264)
T PRK13980 98 FFSAVPDADRLRRGNIMARTRMVLLYDYANRDNRLVLGTSNKSELLLGYFTK--YGDGAVDIN 158 (264)
T ss_pred HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHCCC--CCCCCCCHH
T ss_conf 9986310006688875898999999998643397765588674798721001--687665624
No 136
>TIGR00454 TIGR00454 conserved hypothetical protein TIGR00454; InterPro: IPR005245 This entry describes a family of conserved hypothetical proteins with no known function. .
Probab=57.87 E-value=13 Score=16.65 Aligned_cols=93 Identities=12% Similarity=0.114 Sum_probs=64.6
Q ss_pred EECCCCCCHHHHHHHHHHHHHHH----CCHHH-CCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHH
Q ss_conf 65599859999999999999972----79578-68999945788754600588886320268773589841420358889
Q gi|254781019|r 43 SVLNPDEDIVTMAAAAALPIMQN----QDKNL-IDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCA 117 (396)
Q Consensus 43 ~v~~~~Ed~~tmA~~Aa~~~L~~----~~~~~-Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~A 117 (396)
|.+.+-|-+ |=--|.+++++- ....+ ++-++++| | | ..|.|..||.++-..-+++-..| .+-.|++==
T Consensus 13 Rlg~d~EKP--L~evcGr~lIDhvl~~l~~~~GV~~ii~~T-S-P-hTP~Te~y~~~~~~~~~~ivvid--asGkGYiED 85 (204)
T TIGR00454 13 RLGRDVEKP--LLEVCGRKLIDHVLEALKKAKGVDNIIVVT-S-P-HTPKTEEYVAEKYKEYKRIVVID--ASGKGYIED 85 (204)
T ss_pred CCCCCCCCC--HHHHCCCCHHHHHHHHHHHCCCCCEEEEEE-C-C-CCCCCHHHHHHCCCEEEEEEEEE--CCCCCCHHH
T ss_conf 226555653--375658504577778664047875379983-7-7-79763788730585045788997--699960252
Q ss_pred HHHHHHHHHCCCCCEEEEEECCCCC
Q ss_conf 9878999973999769995033201
Q gi|254781019|r 118 LHMACALVAKSPERKVLIVASDVAR 142 (396)
Q Consensus 118 L~~A~~~i~sg~~~~aLVV~sD~~~ 142 (396)
|.-|..+++..=....|||+||+..
T Consensus 86 l~E~~~hlE~~~~EP~lV~ssDl~~ 110 (204)
T TIGR00454 86 LREVLSHLELAFSEPLLVVSSDLVL 110 (204)
T ss_pred HHHHHHHHHHHHCCCEEEEECCHHH
T ss_conf 7899998776633985787436024
No 137
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family; InterPro: IPR014188 This entry represents a subfamily of the alcohol dehydrogenase, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This entry includes YhdH from Escherichia coli and YhfP from Bacillus subtilis both of which bind NADPH or NAD, but not zinc. Both proteins have been studied crystallographically for insight into function. .
Probab=55.51 E-value=8.7 Score=17.68 Aligned_cols=207 Identities=11% Similarity=0.021 Sum_probs=89.9
Q ss_pred CCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEE----ECCCCCCCCCCCCCCCCCCCCEEECCHH-----
Q ss_conf 9769995033201458887533478302468842687630353----1000156786511275887542356601-----
Q gi|254781019|r 130 ERKVLIVASDVARYDLGSSGEPTQGCGAVAILISSQTSILEIE----DITGIYTNDCMDFWRPNYRRTALVDGKY----- 200 (396)
Q Consensus 130 ~~~aLVV~sD~~~~~~~~~~~~t~GaGA~Allv~~~~~~~~~~----~~~~~~~~~~~df~rp~~~~~~~~dg~~----- 200 (396)
+|-+|.+...- .-...+|..|.- |.|--++-+++|+...-+ ..++.-..|.. -+.+|.+|.++.
T Consensus 42 YKDALA~tg~g-~v~R~yP~~PGI-D~aG~Vv~S~dp~F~~GD~VivTGyglG~~H~G-----GysqyaRVp~dWlVpLP 114 (330)
T TIGR02823 42 YKDALAITGKG-GVVRSYPMIPGI-DLAGTVVSSEDPRFRPGDEVIVTGYGLGVSHDG-----GYSQYARVPADWLVPLP 114 (330)
T ss_pred HHHHHEECCCC-CEEEECCCCCCC-CCEEEEEECCCCCCCCCCEEEEEEECCCCCCCC-----CCEEEEEECHHHEECCC
T ss_conf 30331013879-768877876881-754689844887757887189974024565157-----62235673323101588
Q ss_pred ---HHHHHH---HHHHHH--HHHHHHHCC-CCHHHCCEEEE---------------------CCCCCHHHHH-HH-HHHC
Q ss_conf ---698999---999999--999999629-88211012331---------------------1454057888-88-6411
Q gi|254781019|r 201 ---STKIYL---QSLEAV--WHDYQKNKG-HDFNDFQYFCY---------------------HQPFTRMAEK-AH-IRLS 248 (396)
Q Consensus 201 ---~~~~y~---~~~~~a--~~~~l~~~g-~~~~did~~v~---------------------H~p~~k~~~~-~~-~~l~ 248 (396)
|.+..+ .+--.| --..|+++| +++++=.=+|- |...+|.-++ -. +.|.
T Consensus 115 ~glsl~eAM~~GTAGfTAaL~V~aLe~~Gl~~P~~GpVlVTGAtGGVGS~Av~~L~~lGY~V~A~tGk~~~~~~yL~~LG 194 (330)
T TIGR02823 115 EGLSLREAMALGTAGFTAALSVMALERNGLLTPEDGPVLVTGATGGVGSLAVAILSKLGYEVVASTGKAEEEVEYLKELG 194 (330)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCC
T ss_conf 98898899986007789999999999726888888878870677877899999998379769997378377889998658
Q ss_pred --CHHHHHHHHHH-HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCC--CCEEEEEEEEEC-
Q ss_conf --02454410013-455543334445323854323389999999971574369888999840798--303778778602-
Q gi|254781019|r 249 --KIVHQNLSVAE-IEKAIGITTLYNRLIGNSYTASLYIALISLLDHSSENLAGKRVGFFSYGSG--CVAEFFSGIVQK- 322 (396)
Q Consensus 249 --~~~~~~~~~~~-~e~~~~~~~~~~~~~GN~~SASi~l~L~slLe~~~~~~~G~rIll~syGsG--~~a~~f~~~v~~- 322 (396)
+.+.++..... -.+.+.+.+.... +=+.|+.. |+.+|. ..+.|=-|-.||.=.| +.+.+|.+.++.
T Consensus 195 A~evi~R~~l~~~a~~kPL~k~~WAGA-vDtVGG~~----La~~l~---~~~ygG~VA~cGlagG~~L~tTV~PFILRGV 266 (330)
T TIGR02823 195 ASEVIDREELSEDAPGKPLEKERWAGA-VDTVGGKT----LANVLA---QLKYGGAVAACGLAGGADLPTTVLPFILRGV 266 (330)
T ss_pred CCCCCCHHHCCCCCCCCCCCCCCCCCE-EECCCHHH----HHHHHH---HHCCCCEEEEEECCCCCCCCCEECCHHHCCC
T ss_conf 110577112276878886312222215-74687579----999998---4068978999942679863501255043285
Q ss_pred ---C----HHHHHHCCCHHHHHHCCCCCCHHHHHHHHH
Q ss_conf ---2----687652038788974272238999999986
Q gi|254781019|r 323 ---N----YRKKSHQKRHQHIINSRIPISYQVYCDLHQ 353 (396)
Q Consensus 323 ---~----~~~~~~~~~~~~~L~~r~~l~~~~y~~~~~ 353 (396)
+ +-.+..+..+++||++ .+.+...+++-+
T Consensus 267 ~LlGIDSV~~p~~~R~~~W~RLA~--dl~~~~L~~~~~ 302 (330)
T TIGR02823 267 SLLGIDSVYCPMALREAAWQRLAT--DLKPRNLESLTT 302 (330)
T ss_pred EEEEECHHCCCHHHHHHHHHHHHH--HCCHHHHHHHHC
T ss_conf 388853001887899999998874--159778887842
No 138
>cd01451 vWA_Magnesium_chelatase Magnesium chelatase: Mg-chelatase catalyses the insertion of Mg into protoporphyrin IX (Proto). In chlorophyll biosynthesis, insertion of Mg2+ into protoporphyrin IX is catalysed by magnesium chelatase in an ATP-dependent reaction. Magnesium chelatase is a three sub-unit (BchI, BchD and BchH) enzyme with a novel arrangement of domains: the C-terminal helical domain is located behind the nucleotide binding site. The BchD domain contains a AAA domain at its N-terminus and a VWA domain at its C-terminus. The VWA domain has been speculated to be involved in mediating protein-protein interactions.
Probab=54.86 E-value=14 Score=16.34 Aligned_cols=87 Identities=14% Similarity=0.129 Sum_probs=49.0
Q ss_pred CCHHHHHHHHHHHHHHHC-C-HHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHH
Q ss_conf 599999999999999727-9-57868999945788754600588886320268773589841420358889987899997
Q gi|254781019|r 49 EDIVTMAAAAALPIMQNQ-D-KNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACALVA 126 (396)
Q Consensus 49 Ed~~tmA~~Aa~~~L~~~-~-~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i~ 126 (396)
++-...+-.|+..+|.+. . .+.|.+|.|......-..|++...-.-.-.+. ...+ .++.....||..|..+++
T Consensus 16 ~~rl~~aK~a~~~ll~d~~~~~D~v~lv~F~g~~a~~~lppT~~~~~~~~~l~-~L~~----gG~T~l~~gL~~a~~~~~ 90 (178)
T cd01451 16 RHRMAAAKGAVLSLLRDAYQRRDKVALIAFRGTEAEVLLPPTRSVELAKRRLA-RLPT----GGGTPLAAGLLAAYELAA 90 (178)
T ss_pred CCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEECCCCCCHHHHHHHHH-CCCC----CCCCCHHHHHHHHHHHHH
T ss_conf 56799999999999997434678899999759755585688765799999872-1678----898519999999999999
Q ss_pred CC----CCCEEEEEECCC
Q ss_conf 39----997699950332
Q gi|254781019|r 127 KS----PERKVLIVASDV 140 (396)
Q Consensus 127 sg----~~~~aLVV~sD~ 140 (396)
.. ...+.+|+-||=
T Consensus 91 ~~~~~~~~~~~iiLlTDG 108 (178)
T cd01451 91 EQARDPGQRPLIVVITDG 108 (178)
T ss_pred HHCCCCCCCEEEEEECCC
T ss_conf 850278984399998469
No 139
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=52.16 E-value=12 Score=16.75 Aligned_cols=63 Identities=17% Similarity=0.123 Sum_probs=28.9
Q ss_pred HHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECC
Q ss_conf 76303832466559985999999999999997279578689999457887546005888863202687735898414
Q gi|254781019|r 33 FYVGIGQERMSVLNPDEDIVTMAAAAALPIMQNQDKNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQ 109 (396)
Q Consensus 33 ~~~~lGi~~r~v~~~~Ed~~tmA~~Aa~~~L~~~~~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~ 109 (396)
+.+-+|.+. .++- ..-|.|+.-+.++| +...=|-||+-+- ...+++..|.. .|+.+ --.|+.-
T Consensus 40 ~a~~~g~~~-av~v---~sgT~AL~lal~~l---~i~~gdeVivp~~----tf~at~~ai~~-~Ga~p--vfvDid~ 102 (375)
T PRK11706 40 LEQRFGCAK-VLLT---PSCTAALEMAALLL---DIQPGDEVIMPSY----TFVSTANAFVL-RGAKI--VFVDIRP 102 (375)
T ss_pred HHHHHCCCE-EEEE---CCHHHHHHHHHHHC---CCCCCCEEEECCC----CHHHHHHHHHH-CCCEE--EEEEECC
T ss_conf 999978493-9996---78899999999986---9889399998996----64999999998-39969--9997168
No 140
>KOG2915 consensus
Probab=49.71 E-value=4.4 Score=19.53 Aligned_cols=21 Identities=10% Similarity=0.048 Sum_probs=7.7
Q ss_pred HHHHHHHHHHCCCCCCEEEEE
Q ss_conf 058888632026877358984
Q gi|254781019|r 87 SAAIWLHKLLGLNSSCRVVEL 107 (396)
Q Consensus 87 ~~a~~v~~~Lgl~~~~~~~Di 107 (396)
|.+..+.+.++-..+..+||+
T Consensus 118 SlShaiaraV~ptGhl~tfef 138 (314)
T KOG2915 118 SLSHAIARAVAPTGHLYTFEF 138 (314)
T ss_pred HHHHHHHHHHCCCCCEEEEEE
T ss_conf 488999986376762699983
No 141
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=49.49 E-value=17 Score=15.81 Aligned_cols=34 Identities=21% Similarity=0.297 Sum_probs=22.7
Q ss_pred CHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHH
Q ss_conf 60058888632026877358984142035888998
Q gi|254781019|r 85 SKSAAIWLHKLLGLNSSCRVVELKQACYSATCALH 119 (396)
Q Consensus 85 ~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~ 119 (396)
.|++-....+.|.+.+.-..+||..+| |+-+|+.
T Consensus 60 qP~iVA~MlElL~l~pg~rVLEIGTGS-GYqAAlL 93 (317)
T PRK13943 60 QPSLMALFMEWVGLDKGMRVLEIGGGT-GYNAAVM 93 (317)
T ss_pred HHHHHHHHHHHHCCCCCCEEEEECCCC-CHHHHHH
T ss_conf 689999999971789998689965774-3899999
No 142
>KOG4342 consensus
Probab=47.35 E-value=19 Score=15.60 Aligned_cols=38 Identities=29% Similarity=0.441 Sum_probs=27.8
Q ss_pred CCCCCC--HHHHHHHHHHHHCCCCCCCCEEEEEEECCCCC
Q ss_conf 854323--38999999997157436988899984079830
Q gi|254781019|r 275 GNSYTA--SLYIALISLLDHSSENLAGKRVGFFSYGSGCV 312 (396)
Q Consensus 275 GN~~SA--Si~l~L~slLe~~~~~~~G~rIll~syGsG~~ 312 (396)
||+|+| |+--.|.++-.+..+...+.-.++||||-|-.
T Consensus 457 gntYtad~~v~dVL~tv~qnk~~~~~~~gl~lfG~GDGGG 496 (1078)
T KOG4342 457 GNTYTADGSVEDVLKTVAQNKDKGRANHGLFLFGFGDGGG 496 (1078)
T ss_pred CCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCC
T ss_conf 8753566749999999985578443675349997258889
No 143
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases; InterPro: IPR005958 This entry describes tyrosine aminotransferase (2.6.1.5 from EC) as found in animals and Trypanosoma cruzi (Euglenozoa). It is the first enzyme of a pathway of tyrosine degradation via homogentisate. L-tyrosine + 2-oxoglutarate = 4-hydroxyphenylpyruvate + L-glutamate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway are included in this family. ; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding, 0006519 amino acid and derivative metabolic process.
Probab=46.11 E-value=15 Score=16.23 Aligned_cols=121 Identities=16% Similarity=0.197 Sum_probs=70.7
Q ss_pred ECHHHHHHHCC--CCHH--HHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCHHHCCEEEEECCCCCCCC-HHHHHH
Q ss_conf 55999998709--9987--976303832466559985999999999999997279578689999457887546-005888
Q gi|254781019|r 17 LDLSVIAEKYR--LDVA--KFYVGIGQERMSVLNPDEDIVTMAAAAALPIMQNQDKNLIDTLFFATESSVDQS-KSAAIW 91 (396)
Q Consensus 17 v~~~~l~~~~g--~~~~--k~~~~lGi~~r~v~~~~Ed~~tmA~~Aa~~~L~~~~~~~Id~li~~T~t~~~~~-~~~a~~ 91 (396)
++.+.|....- .+++ |--..|++..=++- +.=-|..-|.+|..++|+--.-+ =|+.+.|.-.. +++|.|
T Consensus 19 ~~iR~i~~~~~~~~~~~~~Kp~i~L~~GDPs~f-~~lrT~~ea~~Av~~al~Sg~~N-----gYap~~G~~~AR~AvA~y 92 (424)
T TIGR01265 19 VPIRKIVDSLKVSPNPEDVKPVIPLSHGDPSVF-GNLRTAPEAEEAVKDALRSGKFN-----GYAPSVGALAAREAVAEY 92 (424)
T ss_pred CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCHHHHHHHHHHHHCCCCC-----CCCCCCCHHHHHHHHHHH
T ss_conf 428999998413788888830015888788877-78888789999999998347856-----766436867888999999
Q ss_pred HH------HHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEE--------------CCCCCCCCC
Q ss_conf 86------32026877358984142035888998789999739997699950--------------332014588
Q gi|254781019|r 92 LH------KLLGLNSSCRVVELKQACYSATCALHMACALVAKSPERKVLIVA--------------SDVARYDLG 146 (396)
Q Consensus 92 v~------~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~--------------sD~~~~~~~ 146 (396)
+. +.|. ....+=|+ .=|+|...||+++..-|+..++.++||== =|+..|++|
T Consensus 93 ~~~sfvhn~~~~--~~l~a~DV-~ltsGCsqAIe~~I~aLA~~pG~NILvPRPGfP~Y~t~A~~~~lEvr~ydLd 164 (424)
T TIGR01265 93 LSNSFVHNQRLP--GKLSADDV-VLTSGCSQAIEIVIEALAQNPGANILVPRPGFPLYDTRAAFSGLEVRLYDLD 164 (424)
T ss_pred HHCCEEECCCCC--CCCCCCCE-EEECCCHHHHHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHCCCCCCCCCCC
T ss_conf 662221257888--87576644-8847722689999999726898835568777866899997718720002467
No 144
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=45.69 E-value=19 Score=15.61 Aligned_cols=62 Identities=15% Similarity=0.064 Sum_probs=26.8
Q ss_pred HHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEEC
Q ss_conf 7630383246655998599999999999999727957868999945788754600588886320268773589841
Q gi|254781019|r 33 FYVGIGQERMSVLNPDEDIVTMAAAAALPIMQNQDKNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELK 108 (396)
Q Consensus 33 ~~~~lGi~~r~v~~~~Ed~~tmA~~Aa~~~L~~~~~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~ 108 (396)
+.+-+|.+.--.+. +-|.|...+..+| +...=|-||+.+-| ..+++..|. ..|+.+ --.|+.
T Consensus 38 ~~~~~g~k~~v~~~----sgT~AL~lal~al---~~~~gdeVivp~~t----f~at~~ai~-~~Ga~p--vf~Dvd 99 (380)
T TIGR03588 38 LAEYVGAKYAVAFN----SATSALHIACLAL---GVGPGDEVWTTPIT----FVATANCAL-YCGAKV--DFVDID 99 (380)
T ss_pred HHHHHCCCEEEEEC----CHHHHHHHHHHHC---CCCCCCEEEECCCC----CHHHHHHHH-HCCCEE--EEEECC
T ss_conf 99997859499975----8899999999984---99998999967853----088679999-879968--998441
No 145
>PRK08507 prephenate dehydrogenase; Validated
Probab=44.91 E-value=20 Score=15.37 Aligned_cols=38 Identities=24% Similarity=0.394 Sum_probs=23.5
Q ss_pred HHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCC
Q ss_conf 5786899994578875460058888632026877358984142
Q gi|254781019|r 68 KNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQA 110 (396)
Q Consensus 68 ~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~a 110 (396)
..+.|+|++|| |+......- .+...+.+++-..|+...
T Consensus 56 i~~aDlVila~--Pv~~~~~~l---~~l~~l~~~~iitDv~Sv 93 (275)
T PRK08507 56 IKECDVIFLAI--PVDAIIEIL---QKLLDIKENTTIIDLGST 93 (275)
T ss_pred CCCCCEEEEEC--CHHHHHHHH---HHHHHCCCCCEEEECCCH
T ss_conf 36579899917--699999999---998604678889834312
No 146
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA; InterPro: IPR004432 Members of this entry represent PfaA, which is involved in omega-3 polyunsaturated fatty acid biosynthesis, for example PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is found together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologues of PfaA, also included in this entry, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis; an alternative to the more familiar iterated mechanism of chain extension and desaturation, and like PfaA the more distant homologues are likewise found near genes for homologues of PfaB, PfaC, and/or PfaD..
Probab=43.94 E-value=21 Score=15.28 Aligned_cols=127 Identities=18% Similarity=0.231 Sum_probs=66.6
Q ss_pred EEEECCCEEECHHHHHHHC------------------CCCHHHHHH--HCCCCEEEECCCCCCHHHHHHHHHHHHHHHCC
Q ss_conf 8873489045599999870------------------999879763--03832466559985999999999999997279
Q gi|254781019|r 8 ISFYTTNQYLDLSVIAEKY------------------RLDVAKFYV--GIGQERMSVLNPDEDIVTMAAAAALPIMQNQD 67 (396)
Q Consensus 8 i~~y~P~~~v~~~~l~~~~------------------g~~~~k~~~--~lGi~~r~v~~~~Ed~~tmA~~Aa~~~L~~~~ 67 (396)
+++=||++.|...|.++.. |-|-+||-. |+|=.++-.. -=..-|-.-..+|.|+..|
T Consensus 78 MEFGLPPNILELTD~sQLLSLvVAkEVL~DA~lpd~sgYDRDkiGITLGvGGGQK~~~---sL~aRLQyPVL~KV~K~SG 154 (2773)
T TIGR02813 78 MEFGLPPNILELTDISQLLSLVVAKEVLNDAKLPDDSGYDRDKIGITLGVGGGQKLSS---SLNARLQYPVLKKVFKASG 154 (2773)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCC---CHHHHCCCHHHHHHHHHCC
T ss_conf 5357585166662288999999999998525788887876232025741476400022---0132203336888874158
Q ss_pred HHHCC--EEE-------EECC--CCCC-CCHHHHHHHHHHHCCCC-CCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEE
Q ss_conf 57868--999-------9457--8875-46005888863202687-7358984142035888998789999739997699
Q gi|254781019|r 68 KNLID--TLF-------FATE--SSVD-QSKSAAIWLHKLLGLNS-SCRVVELKQACYSATCALHMACALVAKSPERKVL 134 (396)
Q Consensus 68 ~~~Id--~li-------~~T~--t~~~-~~~~~a~~v~~~Lgl~~-~~~~~Di~~aC~g~~~AL~~A~~~i~sg~~~~aL 134 (396)
.+|-| +|| +.=| |.|- ..-=++..|++++.+.. || .+| .||.|.++||.+|.+-+--|+ +..+
T Consensus 155 ~~d~D~~~lI~KF~~~Yi~WEENSFPG~LGNVIsGRIANRFDlGG~NC-VVD--AACAGSLAA~~~Als~L~E~R-Se~M 230 (2773)
T TIGR02813 155 VEDEDSEMLIKKFQDQYIHWEENSFPGSLGNVISGRIANRFDLGGMNC-VVD--AACAGSLAALRLALSELLEGR-SEMM 230 (2773)
T ss_pred CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCHHHHHCCCCCCH-HHH--HHHHHHHHHHHHHHHHHCCCC-CCEE
T ss_conf 876468999998762134441457897643301010110001588425-666--643667999999998630253-2145
Q ss_pred EE---ECCCC
Q ss_conf 95---03320
Q gi|254781019|r 135 IV---ASDVA 141 (396)
Q Consensus 135 VV---~sD~~ 141 (396)
|- |+|-+
T Consensus 231 I~GGVC~DNS 240 (2773)
T TIGR02813 231 ITGGVCTDNS 240 (2773)
T ss_pred EECCCCCCCC
T ss_conf 6275324888
No 147
>TIGR00263 trpB tryptophan synthase, beta subunit; InterPro: IPR006654 Tryptophan synthase catalyzes the last step in the biosynthesis of tryptophan , : L-serine + 1-(indol-3-yl)glycerol 3-phosphate = L-tryptophan + glyceraldehyde 3-phosphate + H_2O It has two functional domains, each found in bacteria and plants on a separate subunit: alpha chain (IPR002028 from INTERPRO) is for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate and beta chain is for the synthesis of tryptophan from indole and serine. In fungi the two domains are fused together on a single multifunctional protein . The beta chain of the enzyme, represented here, requires pyridoxal-phosphate as a cofactor. The pyridoxal-phosphate group is attached to a lysine residue. The region around this lysine residue also contains two histidine residues which are part of the pyridoxal-phosphate binding site.; GO: 0004834 tryptophan synthase activity, 0006568 tryptophan metabolic process.
Probab=42.67 E-value=22 Score=15.15 Aligned_cols=141 Identities=16% Similarity=0.089 Sum_probs=62.3
Q ss_pred EEECCCEEEC-HHHHHHHCC---C--CHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCC--HHHCCEEEEECCC
Q ss_conf 8734890455-999998709---9--987976303832466559985999999999999997279--5786899994578
Q gi|254781019|r 9 SFYTTNQYLD-LSVIAEKYR---L--DVAKFYVGIGQERMSVLNPDEDIVTMAAAAALPIMQNQD--KNLIDTLFFATES 80 (396)
Q Consensus 9 ~~y~P~~~v~-~~~l~~~~g---~--~~~k~~~~lGi~~r~v~~~~Ed~~tmA~~Aa~~~L~~~~--~~~Id~li~~T~t 80 (396)
|-|||+.-+. .++|+.++. . |++. ..=+-.-=+.++ -+++++|.|-+=.+++ .... ++.=|++= |
T Consensus 11 GqyvPE~Lm~a~~eLe~af~~a~~DnD~~F-~~El~~lL~~Y~-GRpTPLt~A~nlt~~~-Gg~kiYLKREDLnH----T 83 (412)
T TIGR00263 11 GQYVPETLMPALEELEAAFEKAKKDNDPEF-KAELEELLKNYA-GRPTPLTFAKNLTEKL-GGAKIYLKREDLNH----T 83 (412)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCCCHHH-HHHHHHHHHHCC-CCCCHHHHHHHHHHHC-CCCEEEEECHHHCC----C
T ss_conf 824318888999999999999862256788-999999998607-8986667999999853-89668861101046----5
Q ss_pred CCCCCHHHHHH----HHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCC-CCCCCCCC
Q ss_conf 87546005888----86320268773589841420358889987899997399976999503320145888-75334783
Q gi|254781019|r 81 SVDQSKSAAIW----LHKLLGLNSSCRVVELKQACYSATCALHMACALVAKSPERKVLIVASDVARYDLGS-SGEPTQGC 155 (396)
Q Consensus 81 ~~~~~~~~a~~----v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~~~~-~~~~t~Ga 155 (396)
+ .-|-+.+. |++++| +.=-..+...+.-|-.+|+.-|.- |..-.+=.=+.|+-|..+|= ..| ..||
T Consensus 84 G--AHKiNNalGQ~LLAKrMG--K~R~IAETGAGQHGVATAtaaAll----Gl~C~vYMGa~DV~RQ~pNVFRMe-llGA 154 (412)
T TIGR00263 84 G--AHKINNALGQALLAKRMG--KKRIIAETGAGQHGVATATAAALL----GLDCEVYMGAEDVERQKPNVFRME-LLGA 154 (412)
T ss_pred C--HHHHHHHHHHHHHHHHCC--CCEEEEEECCCCHHHHHHHHHHHC----CCCEEEECCCCCHHHCCCCHHHHH-HCCC
T ss_conf 4--358999999999998728--935887408980379999999971----895598348613514577523451-3778
Q ss_pred CEEEEEECCC
Q ss_conf 0246884268
Q gi|254781019|r 156 GAVAILISSQ 165 (396)
Q Consensus 156 GA~Allv~~~ 165 (396)
--+++-.|..
T Consensus 155 ~V~pV~sGs~ 164 (412)
T TIGR00263 155 KVVPVTSGSG 164 (412)
T ss_pred EEEEECCCCC
T ss_conf 6833015787
No 148
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=42.36 E-value=21 Score=15.25 Aligned_cols=62 Identities=15% Similarity=0.153 Sum_probs=27.4
Q ss_pred HHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEEC
Q ss_conf 7630383246655998599999999999999727957868999945788754600588886320268773589841
Q gi|254781019|r 33 FYVGIGQERMSVLNPDEDIVTMAAAAALPIMQNQDKNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELK 108 (396)
Q Consensus 33 ~~~~lGi~~r~v~~~~Ed~~tmA~~Aa~~~L~~~~~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~ 108 (396)
+.+-+|.+.--.+ ..-|.|+..+..+| +.+|. |-||+-+ ....+++..+.. .|..+ --.|+.
T Consensus 42 ~a~~~g~k~av~v----~sgT~AL~lal~al-~i~~g--deVi~p~----~tf~at~~ai~~-~Ga~p--vf~Did 103 (379)
T PRK11658 42 FCQLTGNQHAIAV----SSATAGMHITLMAL-GIGPG--DEVITPS----QTWVSTLNMIVL-LGATP--VMVDVD 103 (379)
T ss_pred HHHHHCCCEEEEE----CCHHHHHHHHHHHC-CCCCC--CEEEECC----CCHHHHHHHHHH-CCCEE--EEECCC
T ss_conf 9999786949997----68899999999986-98883--9999899----556999999998-19989--974574
No 149
>PRK07591 threonine synthase; Validated
Probab=40.54 E-value=24 Score=14.95 Aligned_cols=36 Identities=11% Similarity=0.140 Sum_probs=29.3
Q ss_pred CCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCC
Q ss_conf 5432338999999997157436988899984079830
Q gi|254781019|r 276 NSYTASLYIALISLLDHSSENLAGKRVGFFSYGSGCV 312 (396)
Q Consensus 276 N~~SASi~l~L~slLe~~~~~~~G~rIll~syGsG~~ 312 (396)
-..+|..+-+|..+.+ .|.+.++++|.++--|+|+.
T Consensus 358 EpasA~alAgl~kl~e-~G~i~~de~VV~~lTG~GLK 393 (422)
T PRK07591 358 ETAGGTTVAVLKKLVE-AGKIDPDETTVVYITGNGLK 393 (422)
T ss_pred CCCHHHHHHHHHHHHH-CCCCCCCCEEEEEECCCCCC
T ss_conf 8608999999999997-69999999499990887667
No 150
>TIGR03285 methan_mark_14 putative methanogenesis marker protein 14. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=40.19 E-value=24 Score=14.92 Aligned_cols=33 Identities=9% Similarity=0.124 Sum_probs=23.1
Q ss_pred CCCCHHHHHHHHHHHHHHHCC--HHHCCEEEEECC
Q ss_conf 985999999999999997279--578689999457
Q gi|254781019|r 47 PDEDIVTMAAAAALPIMQNQD--KNLIDTLFFATE 79 (396)
Q Consensus 47 ~~Ed~~tmA~~Aa~~~L~~~~--~~~Id~li~~T~ 79 (396)
..|.+..|-......++++++ .+|++.++=.|-
T Consensus 61 tresV~elV~dtl~e~~k~A~l~i~DL~FVVRSTG 95 (445)
T TIGR03285 61 TRESVAELVKDTLKESLKKAGLDIDDLDFVVRSTG 95 (445)
T ss_pred CHHHHHHHHHHHHHHHHHHCCCCCHHCCEEEEECC
T ss_conf 18899999999999999973998022557995064
No 151
>TIGR00108 eRF peptide chain release factor eRF/aRF, subunit 1; InterPro: IPR004403 These proteins are translation factors that have been characterised in eukaryotes as the non-GTP-binding subunit of a cytosolic heterodimer that acts as a translation release factor for all three stop codons. Members of this orthologous family are found in Eukarya and Archaea. The name used should be eRF1 for the Archaea and aRF1 for the Eukarya. Alternative names include eRF1, SUP45, omnipotent suppressor protein 1.; GO: 0016149 translation release factor activity codon specific, 0006415 translational termination, 0005737 cytoplasm.
Probab=39.90 E-value=22 Score=15.15 Aligned_cols=75 Identities=25% Similarity=0.273 Sum_probs=53.4
Q ss_pred HHHCCEEEEECCCCCC-CCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCC
Q ss_conf 5786899994578875-460058888632026877358984142035888998789999739997699950332014588
Q gi|254781019|r 68 KNLIDTLFFATESSVD-QSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACALVAKSPERKVLIVASDVARYDLG 146 (396)
Q Consensus 68 ~~~Id~li~~T~t~~~-~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~~~ 146 (396)
.+=|.+.| ||+ ..+..+-++-..|+-..|+-.=.....--+++.|+.+=.-+.+.=|.+=.++.|+++.+.+++
T Consensus 29 TeLiSLyI-----PP~~~I~dv~~~Lr~ElsqASNIKSk~tr~nVlSAIe~ilqrLKlf~~pPe~GlV~~~G~v~~~gpG 103 (425)
T TIGR00108 29 TELISLYI-----PPDRQISDVAKHLREELSQASNIKSKQTRKNVLSAIEAILQRLKLFKKPPENGLVIFCGMVPREGPG 103 (425)
T ss_pred CEEEEEEE-----CCCCCCHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCC
T ss_conf 24789986-----7889511788888875213202022221135789999999986421577302768998676159888
Q ss_pred C
Q ss_conf 8
Q gi|254781019|r 147 S 147 (396)
Q Consensus 147 ~ 147 (396)
+
T Consensus 104 ~ 104 (425)
T TIGR00108 104 T 104 (425)
T ss_pred C
T ss_conf 4
No 152
>COG3897 Predicted methyltransferase [General function prediction only]
Probab=38.40 E-value=25 Score=14.84 Aligned_cols=10 Identities=30% Similarity=0.734 Sum_probs=4.5
Q ss_pred HHHHHHHCCC
Q ss_conf 9999996298
Q gi|254781019|r 213 WHDYQKNKGH 222 (396)
Q Consensus 213 ~~~~l~~~g~ 222 (396)
+...++..|.
T Consensus 164 ~~~~l~~~g~ 173 (218)
T COG3897 164 WKDRLAEAGA 173 (218)
T ss_pred HHHHHHHCCC
T ss_conf 9999985797
No 153
>COG0533 QRI7 Metal-dependent proteases with possible chaperone activity [Posttranslational modification, protein turnover, chaperones]
Probab=38.31 E-value=26 Score=14.73 Aligned_cols=79 Identities=13% Similarity=0.068 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHCC--HHHCCEEEEECCCCCCCCHHHHHH--HHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCC
Q ss_conf 9999999997279--578689999457887546005888--863202687735898414203588899878999973999
Q gi|254781019|r 55 AAAAALPIMQNQD--KNLIDTLFFATESSVDQSKSAAIW--LHKLLGLNSSCRVVELKQACYSATCALHMACALVAKSPE 130 (396)
Q Consensus 55 A~~Aa~~~L~~~~--~~~Id~li~~T~t~~~~~~~~a~~--v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i~sg~~ 130 (396)
-....+++|++++ ++|||+|-+ | .+|-..++.-+- .++.|.+.-+.+.+-++ -|-|=+.+-...... ..-
T Consensus 54 i~~li~~al~eA~~~~~dID~IA~-T-~gPGL~gaL~VG~~~Ak~LA~a~~kPli~Vn-H~~gHi~a~~l~~~~---~~p 127 (342)
T COG0533 54 IPPLIEEALAEAGVSLEDIDAIAV-T-AGPGLGGALLVGATAAKALALALNKPLIPVN-HLEGHIEAARLETGL---AFP 127 (342)
T ss_pred HHHHHHHHHHHCCCCHHCCCEEEE-E-CCCCCHHHHHHHHHHHHHHHHHHCCCEEECC-HHHHHHHHHHHCCCC---CCC
T ss_conf 999999999984998301888998-1-6999447789999999999998299972312-279888788752478---898
Q ss_pred CEEEEEECC
Q ss_conf 769995033
Q gi|254781019|r 131 RKVLIVASD 139 (396)
Q Consensus 131 ~~aLVV~sD 139 (396)
--+|+|+.-
T Consensus 128 ~v~LlVSGG 136 (342)
T COG0533 128 PVALLVSGG 136 (342)
T ss_pred CEEEEEECC
T ss_conf 179999558
No 154
>PRK05638 threonine synthase; Validated
Probab=37.79 E-value=26 Score=14.68 Aligned_cols=37 Identities=27% Similarity=0.293 Sum_probs=31.5
Q ss_pred CCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCC
Q ss_conf 85432338999999997157436988899984079830
Q gi|254781019|r 275 GNSYTASLYIALISLLDHSSENLAGKRVGFFSYGSGCV 312 (396)
Q Consensus 275 GN~~SASi~l~L~slLe~~~~~~~G~rIll~syGsG~~ 312 (396)
--..||..+-+|..+++ .|.+.++++|.++--|+|+.
T Consensus 322 ~EPasAaa~Agl~kl~e-~G~I~~~e~VV~vlTGsGLK 358 (443)
T PRK05638 322 AELSSAVVMPALLKLVE-TGFIEKGDRVVLVVTGSGLK 358 (443)
T ss_pred ECHHHHHHHHHHHHHHH-CCCCCCCCEEEEEECCCCCC
T ss_conf 77578999999999997-69989999299996888777
No 155
>pfam01041 DegT_DnrJ_EryC1 DegT/DnrJ/EryC1/StrS aminotransferase family. The members of this family are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA, StsC, and StsS. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase EC:2.6.1.50, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin.
Probab=35.15 E-value=29 Score=14.42 Aligned_cols=62 Identities=19% Similarity=0.133 Sum_probs=30.1
Q ss_pred HHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEEC
Q ss_conf 7630383246655998599999999999999727957868999945788754600588886320268773589841
Q gi|254781019|r 33 FYVGIGQERMSVLNPDEDIVTMAAAAALPIMQNQDKNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELK 108 (396)
Q Consensus 33 ~~~~lGi~~r~v~~~~Ed~~tmA~~Aa~~~L~~~~~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~ 108 (396)
+.+-+|.+. .++ -..-|.|..++.+++. ..+. |-||+ |.+..++++.-+.. .|+.+ .-.|+.
T Consensus 34 ~~~~~g~k~-~v~---~~sgT~Al~lal~a~~-~~~g--deVi~----p~~t~~at~~ai~~-~G~~p--vf~Dvd 95 (363)
T pfam01041 34 FAAYLGVKH-AVA---VSSGTAALHLALRALG-IGPG--DEVIV----PSFTFVATANAVLY-LGAKP--VFVDID 95 (363)
T ss_pred HHHHHCCCE-EEE---ECCHHHHHHHHHHHCC-CCCC--CEEEE----CCCCCHHHHHHHHH-CCCEE--EEEECC
T ss_conf 999978495-999---7588999999999859-8892--99997----99775988999998-69979--985064
No 156
>pfam05834 Lycopene_cycl Lycopene cyclase protein. This family consists of lycopene beta and epsilon cyclase proteins. Carotenoids with cyclic end groups are essential components of the photosynthetic membranes in all plants, algae, and cyanobacteria. These lipid-soluble compounds protect against photo-oxidation, harvest light for photosynthesis, and dissipate excess light energy absorbed by the antenna pigments. The cyclisation of lycopene (psi, psi-carotene) is a key branch point in the pathway of carotenoid biosynthesis. Two types of cyclic end groups are found in higher plant carotenoids: the beta and epsilon rings. Carotenoids with two beta rings are ubiquitous, and those with one beta and one epsilon ring are common; however, carotenoids with two epsilon rings are rare.
Probab=34.93 E-value=29 Score=14.40 Aligned_cols=20 Identities=20% Similarity=0.365 Sum_probs=12.8
Q ss_pred HHHHHHHHHHHHHCCCCHHH
Q ss_conf 99999999999962988211
Q gi|254781019|r 207 QSLEAVWHDYQKNKGHDFND 226 (396)
Q Consensus 207 ~~~~~a~~~~l~~~g~~~~d 226 (396)
+.....+..+++..|+....
T Consensus 213 ~~~~~~i~~yl~~~gi~~~~ 232 (374)
T pfam05834 213 DALKQRLMDYARALGWRILE 232 (374)
T ss_pred HHHHHHHHHHHHHCCCCCCE
T ss_conf 99999999999972998523
No 157
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=33.12 E-value=31 Score=14.22 Aligned_cols=90 Identities=16% Similarity=0.146 Sum_probs=43.3
Q ss_pred CCCEEEEEEEECCCEEECHHHHHHHCCCCHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHC--C---HHHCCEEE
Q ss_conf 962066888734890455999998709998797630383246655998599999999999999727--9---57868999
Q gi|254781019|r 1 MAIGIEDISFYTTNQYLDLSVIAEKYRLDVAKFYVGIGQERMSVLNPDEDIVTMAAAAALPIMQNQ--D---KNLIDTLF 75 (396)
Q Consensus 1 M~vGI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~~lGi~~r~v~~~~Ed~~tmA~~Aa~~~L~~~--~---~~~Id~li 75 (396)
|||.|.+.|.==.+ |+.. .+..|. .|...|-+..++...-.+.+++.. + .++.|+++
T Consensus 2 mkI~IiGlGLIGgS-------la~a--------l~~~~~---~V~g~d~~~~~~~~A~~~g~id~~~~~~~~~~~aDlii 63 (280)
T PRK07417 2 MNIGIVGLGLIGGS-------LGLD--------LRSLGH---TVYGVSRRESTCERAIERGLVDEASTDLSLLKDCDLVI 63 (280)
T ss_pred CEEEEEECCHHHHH-------HHHH--------HHHCCC---EEEEEECCHHHHHHHHHCCCCCEECCCHHHHCCCCEEE
T ss_conf 78999931857999-------9999--------996899---79999799999999998699752027874605799899
Q ss_pred EECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHH
Q ss_conf 9457887546005888863202687735898414203
Q gi|254781019|r 76 FATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACY 112 (396)
Q Consensus 76 ~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~ 112 (396)
+|| |+......-..+... +++++-..|+...=.
T Consensus 64 la~--Pv~~~~~~~~~~~~~--l~~~~iitDv~SvK~ 96 (280)
T PRK07417 64 LAL--PIGLLLPPSEELIPA--LPPEAIVTDVGSVKE 96 (280)
T ss_pred ECC--CHHHHHHHHHHHHHH--CCCCCEEEECHHHHH
T ss_conf 879--747789999999864--789848996522307
No 158
>PRK02478 Maf-like protein; Reviewed
Probab=32.60 E-value=32 Score=14.17 Aligned_cols=27 Identities=30% Similarity=0.337 Sum_probs=13.1
Q ss_pred EEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEE
Q ss_conf 999457887546005888863202687735898
Q gi|254781019|r 74 LFFATESSVDQSKSAAIWLHKLLGLNSSCRVVE 106 (396)
Q Consensus 74 li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~D 106 (396)
||.||.||-.. .+.+.+|++-.+...|
T Consensus 5 iILAS~SprR~------eLL~~~gi~f~v~~~d 31 (199)
T PRK02478 5 LILASKSPFRR------ALLKNAGLEFSAAAAD 31 (199)
T ss_pred EEEECCCHHHH------HHHHHCCCCEEEECCC
T ss_conf 99737999999------9999789980996379
No 159
>PRK03359 putative electron transfer flavoprotein FixA; Reviewed
Probab=32.27 E-value=32 Score=14.13 Aligned_cols=25 Identities=20% Similarity=0.139 Sum_probs=12.0
Q ss_pred HHHHHHHHHHHHHCCHHHCCEEEEE
Q ss_conf 9999999999972795786899994
Q gi|254781019|r 53 TMAAAAALPIMQNQDKNLIDTLFFA 77 (396)
Q Consensus 53 tmA~~Aa~~~L~~~~~~~Id~li~~ 77 (396)
.-|+++|.++=++.+-.++..+-++
T Consensus 39 e~AlE~AlrlkE~~gg~~VtvvsvG 63 (256)
T PRK03359 39 LNAIEAACQLKQQAAEAQVTALSVG 63 (256)
T ss_pred HHHHHHHHHHHHHCCCCEEEEEEEC
T ss_conf 8999999998885199579999937
No 160
>PRK08197 threonine synthase; Validated
Probab=31.65 E-value=33 Score=14.07 Aligned_cols=35 Identities=29% Similarity=0.271 Sum_probs=26.0
Q ss_pred CCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCC
Q ss_conf 432338999999997157436988899984079830
Q gi|254781019|r 277 SYTASLYIALISLLDHSSENLAGKRVGFFSYGSGCV 312 (396)
Q Consensus 277 ~~SASi~l~L~slLe~~~~~~~G~rIll~syGsG~~ 312 (396)
..||.-+-+|..+.+ .|.+.++++|.+.--|+|+.
T Consensus 347 pasA~alAgl~kl~e-~G~i~~~~~VV~~lTG~GlK 381 (402)
T PRK08197 347 PEGAAALAAAKQLRE-SGWLKSGERVVLFNTGTGLK 381 (402)
T ss_pred CHHHHHHHHHHHHHH-CCCCCCCCEEEEEECCCCCC
T ss_conf 369999999999998-29999999699990888667
No 161
>TIGR00080 pimt protein-L-isoaspartate O-methyltransferase; InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase () (PCMT) (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyzes the transfer of a methyl group from S- adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerization of normal L-aspartyl and L- asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process.
Probab=30.69 E-value=34 Score=13.97 Aligned_cols=47 Identities=21% Similarity=0.132 Sum_probs=30.2
Q ss_pred HHHHCCCCCCCHHHHHHHHHHHH-CCCCCCCCEEEEEEECCCCCEEEE
Q ss_conf 45323854323389999999971-574369888999840798303778
Q gi|254781019|r 270 YNRLIGNSYTASLYIALISLLDH-SSENLAGKRVGFFSYGSGCVAEFF 316 (396)
Q Consensus 270 ~~~~~GN~~SASi~l~L~slLe~-~~~~~~G~rIll~syGsG~~a~~f 316 (396)
.+-.+|.--|=|-|.+-+..+|- ...+.+|+|+|=+|-|||=.+-+.
T Consensus 53 ~al~ig~~qtiS~p~mvA~m~~yL~nhL~~~~~vLeiG~GSGY~aavl 100 (228)
T TIGR00080 53 AALEIGYGQTISAPHMVAKMTEYLENHLKPGAKVLEIGTGSGYQAAVL 100 (228)
T ss_pred CCCCCCCCCEECCHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHH
T ss_conf 520025676244078999999988852140355665047855899999
No 162
>PRK04425 Maf-like protein; Reviewed
Probab=30.66 E-value=24 Score=14.93 Aligned_cols=63 Identities=19% Similarity=0.179 Sum_probs=25.6
Q ss_pred EEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCH----HHHHHHHHHHHHHHH--CCCCCEEEEEECCCCC
Q ss_conf 99945788754600588886320268773589841420----358889987899997--3999769995033201
Q gi|254781019|r 74 LFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQAC----YSATCALHMACALVA--KSPERKVLIVASDVAR 142 (396)
Q Consensus 74 li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC----~g~~~AL~~A~~~i~--sg~~~~aLVV~sD~~~ 142 (396)
||.||.||-.. .+.+.+|++-.+..-|+.-.. ..--.++.+|..-.+ +......+||++|+-.
T Consensus 7 lILAS~SprR~------~LL~~~gi~f~v~~~~idE~~~~~e~~~~~a~~lA~~KA~~v~~~~~~~iVIgaDtvv 75 (196)
T PRK04425 7 LVLGTSSVFRR------EQMERLGIAFQAASPDFDETPMLGESAPQTALRLAEGKARSLTGRFPEALIVGADQVA 75 (196)
T ss_pred EEECCCCHHHH------HHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEE
T ss_conf 99858999999------9998789995997699998999999989999999999999999758997798148499
No 163
>pfam02666 PS_Dcarbxylase Phosphatidylserine decarboxylase. This is a family of phosphatidylserine decarboxylases, EC:4.1.1.65. These enzymes catalyse the reaction: Phosphatidyl-L-serine <= phosphatidylethanolamine + CO2. Phosphatidylserine decarboxylase plays a central role in the biosynthesis of aminophospholipids by converting phosphatidylserine to phosphatidylethanolamine.
Probab=29.92 E-value=33 Score=14.12 Aligned_cols=25 Identities=28% Similarity=0.638 Sum_probs=17.7
Q ss_pred HCCCCCCCCEEEEEEECCCCCEEEEE
Q ss_conf 15743698889998407983037787
Q gi|254781019|r 292 HSSENLAGKRVGFFSYGSGCVAEFFS 317 (396)
Q Consensus 292 ~~~~~~~G~rIll~syGsG~~a~~f~ 317 (396)
....++.||++++|-|||=. -.+|.
T Consensus 154 ~g~~v~kG~e~G~f~fGStV-~l~f~ 178 (201)
T pfam02666 154 EGDEVKKGDELGYFKFGSTV-VLLFP 178 (201)
T ss_pred CCCEEECCCEEEEEECCCEE-EEEEE
T ss_conf 89798457488079628809-99995
No 164
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=29.54 E-value=26 Score=14.71 Aligned_cols=30 Identities=20% Similarity=0.318 Sum_probs=16.6
Q ss_pred HHHHHCCCCCCEEEEECCCHHHHHHHHHHHHH
Q ss_conf 86320268773589841420358889987899
Q gi|254781019|r 92 LHKLLGLNSSCRVVELKQACYSATCALHMACA 123 (396)
Q Consensus 92 v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~ 123 (396)
+...|+|.+.-...|| +|..|..++..|..
T Consensus 64 ~~~kl~L~~G~~lLDi--GCGWG~l~~~aA~~ 93 (283)
T COG2230 64 ILEKLGLKPGMTLLDI--GCGWGGLAIYAAEE 93 (283)
T ss_pred HHHHCCCCCCCEEEEE--CCCHHHHHHHHHHH
T ss_conf 9975699999989874--78844999999998
No 165
>TIGR00631 uvrb excinuclease ABC, B subunit; InterPro: IPR004807 All proteins in this family for which functions are known are DNA helicases that function in the nucleotide excision repair and are endonucleases that make the 3' incision next to DNA damage. They are part of a pathway requiring UvrA, UvrB, UvrC, and UvrD homologs.; GO: 0009381 excinuclease ABC activity, 0006289 nucleotide-excision repair, 0005737 cytoplasm, 0009380 excinuclease repair complex.
Probab=29.24 E-value=36 Score=13.81 Aligned_cols=79 Identities=13% Similarity=0.245 Sum_probs=41.5
Q ss_pred HHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCC----CCEEEEEEEEECCHHHHH---HCCCHHHHHHCC
Q ss_conf 4445323854323389999999971574369888999840798----303778778602268765---203878897427
Q gi|254781019|r 268 TLYNRLIGNSYTASLYIALISLLDHSSENLAGKRVGFFSYGSG----CVAEFFSGIVQKNYRKKS---HQKRHQHIINSR 340 (396)
Q Consensus 268 ~~~~~~~GN~~SASi~l~L~slLe~~~~~~~G~rIll~syGsG----~~a~~f~~~v~~~~~~~~---~~~~~~~~L~~r 340 (396)
.+|++.+=-=..++.|.+|...+ .. -|-|-+++. ==|= =-.=||.| +..+|.. -.+++...||||
T Consensus 305 ENYSRhl~GR~~GEpP~tLlDYF-~g---fP~DfLlvi-DESHVT~PQ~~GMY~G---D~SRK~~LVeYGFRLPSAlDNR 376 (667)
T TIGR00631 305 ENYSRHLSGRKPGEPPYTLLDYF-IG---FPEDFLLVI-DESHVTLPQIGGMYNG---DRSRKQTLVEYGFRLPSALDNR 376 (667)
T ss_pred CHHCCCCCCCCCCCCCCCHHHHC-CC---CCCCEEEEE-EECCCCHHHHHHHHHC---CHHHHHHHHHCCCCCCHHCCCC
T ss_conf 00000216777631596477650-46---886508988-4025750221344130---4676543320277530013587
Q ss_pred CCCCHHHHHHHHHHC
Q ss_conf 223899999998630
Q gi|254781019|r 341 IPISYQVYCDLHQDI 355 (396)
Q Consensus 341 ~~l~~~~y~~~~~~~ 355 (396)
+|.++||++..+..
T Consensus 377 -PLkfeEF~~~~~Q~ 390 (667)
T TIGR00631 377 -PLKFEEFEERINQV 390 (667)
T ss_pred -CCCHHHHHHHCCCE
T ss_conf -89879999855988
No 166
>pfam00814 Peptidase_M22 Glycoprotease family. The Peptidase M22 proteins are part of the HSP70-actin superfamily. The region represented here is an insert into the fold and is not found in the rest of the family (beyond the Peptidase M22 family). Included in this family are the Rhizobial NodU proteins and the HypF regulator. This region also contains the histidine dyad believed to coordinate the metal ion and hence provide catalytic activity. Interestingly the histidines are not well conserved, and there is a lack of experimental evidence to support peptidase activity as a general property of this family. There also appear to be instances of this domain outside of the HSP70-actin superfamily.
Probab=28.99 E-value=37 Score=13.79 Aligned_cols=52 Identities=10% Similarity=0.008 Sum_probs=27.9
Q ss_pred HHHHHHHHHHCC--HHHCCEEEEECCCCCCCCHHHH--HHHHHHHCCCCCCEEEEECC
Q ss_conf 999999997279--5786899994578875460058--88863202687735898414
Q gi|254781019|r 56 AAAALPIMQNQD--KNLIDTLFFATESSVDQSKSAA--IWLHKLLGLNSSCRVVELKQ 109 (396)
Q Consensus 56 ~~Aa~~~L~~~~--~~~Id~li~~T~t~~~~~~~~a--~~v~~~Lgl~~~~~~~Di~~ 109 (396)
....+++|++++ ++|||.|.+.. +|-...+.- .-.++.|...-+.+.+-+++
T Consensus 33 ~~~i~~~l~~a~i~~~did~IAvt~--GPGl~~~L~vG~~~Ak~La~~l~~Pli~VnH 88 (225)
T pfam00814 33 LPLIEEALAEAGLSLEDLDAIAVTA--GPGLFTGLRVGATFAKGLALALDKPLVGVNH 88 (225)
T ss_pred HHHHHHHHHHCCCCHHHCCEEEEEC--CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 9999999998499965689999805--9981886999999999999995698402466
No 167
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=28.85 E-value=37 Score=13.77 Aligned_cols=64 Identities=19% Similarity=0.079 Sum_probs=32.5
Q ss_pred HHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECC
Q ss_conf 976303832466559985999999999999997279578689999457887546005888863202687735898414
Q gi|254781019|r 32 KFYVGIGQERMSVLNPDEDIVTMAAAAALPIMQNQDKNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQ 109 (396)
Q Consensus 32 k~~~~lGi~~r~v~~~~Ed~~tmA~~Aa~~~L~~~~~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~ 109 (396)
++.+-+|.+. .++ . ..-|.|..++.++| +...=|.|++ |....++++.-|.. .|+.+ .-.|+.-
T Consensus 26 ~~~~~~g~k~-~v~-~--~sgt~Al~lal~~l---~~~~gdeVi~----p~~t~~at~~ai~~-~G~~p--v~~Di~~ 89 (352)
T cd00616 26 AFAEYLGVKY-AVA-V--SSGTAALHLALRAL---GIGPGDEVIV----PSFTFVATANAILL-LGATP--VFVDIDP 89 (352)
T ss_pred HHHHHHCCCE-EEE-E--CCHHHHHHHHHHHC---CCCCCCEEEE----CCCCCHHHHHHHHH-CCCEE--EEEECCC
T ss_conf 9999978593-999-7--68899999999986---9788399998----99763989999998-59989--9840777
No 168
>TIGR03419 NifU_clost FeS cluster assembly scaffold protein NifU, Clostridium type. NifU and NifS form a pair of iron-sulfur (FeS) cluster biosynthesis proteins much simpler than the ISC and SUF systems. Members of this protein family are a distinct group of NifU-like proteins, found always to a NifS-like protein and restricted to species that lack a SUF system. Typically, NIF systems service a smaller number of FeS-containing proteins than do ISC or SUF. Members of this particular branch typically are found, almost half the time, near the mnmA gene, involved in the carboxymethylaminomethyl modification of U34 in some tRNAs (see GenProp0704). While other NifU proteins are associated with nitrogen fixation, this family is not.
Probab=28.15 E-value=38 Score=13.70 Aligned_cols=16 Identities=19% Similarity=0.536 Sum_probs=7.0
Q ss_pred HHHHHHHHHHHHHHCC
Q ss_conf 9999999999999629
Q gi|254781019|r 206 LQSLEAVWHDYQKNKG 221 (396)
Q Consensus 206 ~~~~~~a~~~~l~~~g 221 (396)
.+++..++++|+.|+|
T Consensus 106 ~~Al~~Al~~y~~k~g 121 (121)
T TIGR03419 106 EEAIHKAINDYREKNG 121 (121)
T ss_pred HHHHHHHHHHHHHHCC
T ss_conf 9999999999987269
No 169
>TIGR01752 flav_long flavodoxin; InterPro: IPR010086 Flavodoxins are small redox-active proteins with a flavin mononucleotide (FMN) prosthetic group. They function as electron transfer agents in a variety of microbial metabolic processes, including nitrogen fixation by nitrogenase , sulphite reduction , and light-dependent NADP+ reduction during photosynthesis . This entry describes the long chain type, typical for nitrogen fixation but associated with pyruvate formate-lyase activation and cobalamin-dependent methionine synthase activity in Escherichia coli .; GO: 0010181 FMN binding, 0006118 electron transport.
Probab=27.79 E-value=39 Score=13.66 Aligned_cols=36 Identities=25% Similarity=0.396 Sum_probs=28.6
Q ss_pred EEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCC
Q ss_conf 99994578875460058888632026877358984142
Q gi|254781019|r 73 TLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQA 110 (396)
Q Consensus 73 ~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~a 110 (396)
.|+|+|.|+. ...+|-.|+..||-.+.+..+||+.+
T Consensus 3 GifyGt~TG~--T~~iAe~I~~~lG~~~~~d~~ni~~~ 38 (176)
T TIGR01752 3 GIFYGTDTGN--TEGIAEKIAKELGKESDVDVFNIAKA 38 (176)
T ss_pred EEEEECCCCH--HHHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 7898458760--78999999998188866210132312
No 170
>PRK08317 hypothetical protein; Provisional
Probab=26.40 E-value=41 Score=13.50 Aligned_cols=204 Identities=15% Similarity=0.089 Sum_probs=91.1
Q ss_pred HHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCC
Q ss_conf 58888632026877358984142035888998789999739997699950332014588875334783024688426876
Q gi|254781019|r 88 AAIWLHKLLGLNSSCRVVELKQACYSATCALHMACALVAKSPERKVLIVASDVARYDLGSSGEPTQGCGAVAILISSQTS 167 (396)
Q Consensus 88 ~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~~~~~~~~t~GaGA~Allv~~~~~ 167 (396)
-...+.+.|++.+.-..+|+. |..|..+..+|... + ..+-|++.|++...+..+.+-..+.+ +.
T Consensus 7 ~r~~~l~~L~l~pG~~vLDiG--cG~G~~~~~la~~~---g--~~~~v~gvD~s~~~l~~a~~~~~~~~---------~~ 70 (241)
T PRK08317 7 YRARTFELLAVQPGERVLDVG--CGPGNDLRELADRV---G--PEGRVVGIDRSEAMLALARERAAGLL---------SN 70 (241)
T ss_pred HHHHHHHHCCCCCCCEEEEEC--CCCCHHHHHHHHHH---C--CCCEEEEEECCHHHHHHHHHHHHHCC---------CC
T ss_conf 999999736999979999966--41749999999974---9--99789999698899999999986228---------96
Q ss_pred CCEEEECCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHH---HHHHHCCC---CHHHCCEEEECCCCCHHHH
Q ss_conf 30353100015678651127588754235660169899999999999---99996298---8211012331145405788
Q gi|254781019|r 168 ILEIEDITGIYTNDCMDFWRPNYRRTALVDGKYSTKIYLQSLEAVWH---DYQKNKGH---DFNDFQYFCYHQPFTRMAE 241 (396)
Q Consensus 168 ~~~~~~~~~~~~~~~~df~rp~~~~~~~~dg~~~~~~y~~~~~~a~~---~~l~~~g~---~~~did~~v~H~p~~k~~~ 241 (396)
..+.... .+..+| |. ..++.+-...++. ++.....+++ +.++-.|. .--|++.+++|.+.+.+.+
T Consensus 71 -v~~~~~d----~~~lp~--~d-~sfD~v~~~~~l~-h~~d~~~~l~e~~RvLkPGG~~vi~d~Dw~~~~~~~~~~~~~~ 141 (241)
T PRK08317 71 -VEFVRGD----ADGLPF--PD-ESFDAVRSDRVLQ-HLEDPRRALAEMARVLRPGGRAVVLDTDWDTLVIHSGDRALMR 141 (241)
T ss_pred -EEEEECC----HHHCCC--CC-CCCCEEEHHHHHH-HCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHH
T ss_conf -4999554----643589--88-8704562211576-2258999999999981888389999667886742898889999
Q ss_pred HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEEEEEEE
Q ss_conf 88864110245441001345554333444532385432338999999997157436988899984079830377877860
Q gi|254781019|r 242 KAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALISLLDHSSENLAGKRVGFFSYGSGCVAEFFSGIVQ 321 (396)
Q Consensus 242 ~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~slLe~~~~~~~G~rIll~syGsG~~a~~f~~~v~ 321 (396)
+.+..+ ...++ .+.+.--|..+|.++|-. .-++ +.+....+
T Consensus 142 ~i~~~~-----------------------~~~~~---~~~~gr~L~~~l~~aG~~--~v~~-----------~~~~~~~~ 182 (241)
T PRK08317 142 KILNFW-----------------------SDHFA---NPWLGRRLPGLFREAGLT--DIEV-----------EPYTLIET 182 (241)
T ss_pred HHHHHH-----------------------HHHCC---CCHHHHHHHHHHHHCCCC--EEEE-----------EEEEEECC
T ss_conf 999999-----------------------97478---920789999999986990--5688-----------88778426
Q ss_pred CCHHH---HHHCCCHHHHHHCCCCCCHHHHHHHHHHCC
Q ss_conf 22687---652038788974272238999999986306
Q gi|254781019|r 322 KNYRK---KSHQKRHQHIINSRIPISYQVYCDLHQDII 356 (396)
Q Consensus 322 ~~~~~---~~~~~~~~~~L~~r~~l~~~~y~~~~~~~~ 356 (396)
.+.. ......+..+.-....++.++..++.....
T Consensus 183 -~~~~~~~~~~l~~~~~~~~~~g~~t~~e~~~w~~~l~ 219 (241)
T PRK08317 183 -DLKEADKGFDLIRIARYAVEAGAISADEADAWLADLA 219 (241)
T ss_pred -CCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
T ss_conf -8663534879999999999839999999999999999
No 171
>TIGR01225 hutH histidine ammonia-lyase; InterPro: IPR005921 Histidine ammonia-lyase deaminates histidine to urocanic acid, the first step in histidine degradation. It is closely related to phenylalanine ammonia-lyase. ; GO: 0004397 histidine ammonia-lyase activity, 0006548 histidine catabolic process, 0005737 cytoplasm.
Probab=25.92 E-value=42 Score=13.45 Aligned_cols=14 Identities=7% Similarity=0.207 Sum_probs=6.4
Q ss_pred EEEECCCCCCCCHH
Q ss_conf 99945788754600
Q gi|254781019|r 74 LFFATESSVDQSKS 87 (396)
Q Consensus 74 li~~T~t~~~~~~~ 87 (396)
-|||-.||.-..-+
T Consensus 49 ~vYGvNTGFG~l~~ 62 (529)
T TIGR01225 49 TVYGVNTGFGKLAS 62 (529)
T ss_pred EEEEEECCCCCHHH
T ss_conf 15641155001233
No 172
>KOG2112 consensus
Probab=25.88 E-value=42 Score=13.44 Aligned_cols=86 Identities=13% Similarity=0.246 Sum_probs=38.0
Q ss_pred CCHHHCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHC-CCCCCCC
Q ss_conf 882110123311454057888886411024544100134555433344453238543233899999999715-7436988
Q gi|254781019|r 222 HDFNDFQYFCYHQPFTRMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALISLLDHS-SENLAGK 300 (396)
Q Consensus 222 ~~~~did~~v~H~p~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~slLe~~-~~~~~G~ 300 (396)
+.+..+.|+|+|+|......-....... ....++ +.+...- ..-|...+++-.- .+++++ ..-.+-.
T Consensus 26 l~l~NiKwIcP~aP~rpvt~~~G~~~~a------Wfd~~~--~~~~~~~-d~~~~~~aa~~i~---~Li~~e~~~Gi~~~ 93 (206)
T KOG2112 26 LPLPNIKWICPTAPSRPVTLNGGAFMNA------WFDIME--LSSDAPE-DEEGLHRAADNIA---NLIDNEPANGIPSN 93 (206)
T ss_pred CCCCCEEEECCCCCCCCCCCCCCCCCCC------EECCEE--ECCCCCH-HHHHHHHHHHHHH---HHHHHHHHCCCCCC
T ss_conf 8888703876789887621158875552------001042--0765311-1567889999999---99998987599844
Q ss_pred EEEEEEECCCCCEEEEEEE
Q ss_conf 8999840798303778778
Q gi|254781019|r 301 RVGFFSYGSGCVAEFFSGI 319 (396)
Q Consensus 301 rIll~syGsG~~a~~f~~~ 319 (396)
||++.||+-|++-.+++..
T Consensus 94 rI~igGfs~G~a~aL~~~~ 112 (206)
T KOG2112 94 RIGIGGFSQGGALALYSAL 112 (206)
T ss_pred CEEECCCCCHHHHHHHHHH
T ss_conf 5167443742788998772
No 173
>PRK08361 aspartate aminotransferase; Provisional
Probab=25.75 E-value=42 Score=13.43 Aligned_cols=90 Identities=16% Similarity=0.173 Sum_probs=54.5
Q ss_pred CCCEEEECCCCCCHHHHHHHHHHHHHHHCCHHHCCEEEEECCCCC-CCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHH
Q ss_conf 832466559985999999999999997279578689999457887-5460058888632026877358984142035888
Q gi|254781019|r 38 GQERMSVLNPDEDIVTMAAAAALPIMQNQDKNLIDTLFFATESSV-DQSKSAAIWLHKLLGLNSSCRVVELKQACYSATC 116 (396)
Q Consensus 38 Gi~~r~v~~~~Ed~~tmA~~Aa~~~L~~~~~~~Id~li~~T~t~~-~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~ 116 (396)
++-...+.++|-.+..-..+|++++++.- ..-++...+. ..-.++|.++.+..|..-+..-+-++.+ ...
T Consensus 33 dvI~l~~G~pd~~~p~~i~~a~~~~l~~~------~~~Y~~~~G~~~LReaia~~~~~~~g~~v~~d~I~vt~G---~~~ 103 (390)
T PRK08361 33 NVISLGIGEPDFDTPKNIKEAAKRALDEG------WTHYTPNAGIPELREAIAEYYKKFYGVDVDVDNVIVTAG---AYE 103 (390)
T ss_pred CCEECCCCCCCCCCCHHHHHHHHHHHHCC------CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHEEEECCC---HHH
T ss_conf 93899899899987899999999998468------888899888799999999999998788988232998778---999
Q ss_pred HHHHHHHHHHCCCCCEEEEEE
Q ss_conf 998789999739997699950
Q gi|254781019|r 117 ALHMACALVAKSPERKVLIVA 137 (396)
Q Consensus 117 AL~~A~~~i~sg~~~~aLVV~ 137 (396)
||..+...+ .+++..+||-.
T Consensus 104 al~~~~~~l-~~pGD~Vli~~ 123 (390)
T PRK08361 104 ATYLAFESL-LEQGDEVIIPD 123 (390)
T ss_pred HHHHHHHHH-CCCCCEEEECC
T ss_conf 999999996-59999899847
No 174
>TIGR03496 FliI_clade1 flagellar protein export ATPase FliI. Members of this protein family are the FliI protein of bacterial flagellum systems. This protein acts to drive protein export for flagellar biosynthesis. The most closely related family is the YscN family of bacterial type III secretion systems. This model represents one (of three) segment of the FliI family tree. These have been modeled separately in order to exclude the type III secretion ATPases more effectively.
Probab=25.48 E-value=42 Score=13.40 Aligned_cols=36 Identities=22% Similarity=0.576 Sum_probs=25.2
Q ss_pred CCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEEEEEEE
Q ss_conf 432338999999997157436988899984079830377877860
Q gi|254781019|r 277 SYTASLYIALISLLDHSSENLAGKRVGFFSYGSGCVAEFFSGIVQ 321 (396)
Q Consensus 277 ~~SASi~l~L~slLe~~~~~~~G~rIll~syGsG~~a~~f~~~v~ 321 (396)
-|.+|+|..|.+++|.+|..+. |.|+.-.||...+.
T Consensus 258 gyp~~vf~~l~~l~ERag~~~~---------~~GSIT~~~~V~~~ 293 (411)
T TIGR03496 258 GYPPSVFAKLPRLVERAGNGEE---------GKGSITAFYTVLVE 293 (411)
T ss_pred CCCCCHHHHHHHHHHHCCCCCC---------CCEEEEEEEEEECC
T ss_conf 7885388887788874368999---------89868773589757
No 175
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=25.30 E-value=43 Score=13.37 Aligned_cols=20 Identities=40% Similarity=0.317 Sum_probs=15.6
Q ss_pred CCCCCCCEEEEEEECCCCCE
Q ss_conf 74369888999840798303
Q gi|254781019|r 294 SENLAGKRVGFFSYGSGCVA 313 (396)
Q Consensus 294 ~~~~~G~rIll~syGsG~~a 313 (396)
-.+++|++||=+|-|||-.+
T Consensus 68 L~~~~g~~VLEIGtGsGY~a 87 (209)
T COG2518 68 LELKPGDRVLEIGTGSGYQA 87 (209)
T ss_pred HCCCCCCEEEEECCCCHHHH
T ss_conf 48999986888777830999
No 176
>PRK06260 threonine synthase; Validated
Probab=25.15 E-value=43 Score=13.36 Aligned_cols=43 Identities=21% Similarity=0.122 Sum_probs=31.2
Q ss_pred HHHHHCCC---CCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCC
Q ss_conf 44532385---432338999999997157436988899984079830
Q gi|254781019|r 269 LYNRLIGN---SYTASLYIALISLLDHSSENLAGKRVGFFSYGSGCV 312 (396)
Q Consensus 269 ~~~~~~GN---~~SASi~l~L~slLe~~~~~~~G~rIll~syGsG~~ 312 (396)
.+.++-|= ..||.-+-+|..+.+ .|.+.++++|++.--|+|+.
T Consensus 327 ~La~~eGi~vEpasA~alAgl~kl~e-~G~i~~~~~VV~~lTG~GlK 372 (400)
T PRK06260 327 LLARKEGIGVEPASAASVAGLIKLVE-MGVIDKDEKVVCVTTGHLLK 372 (400)
T ss_pred HHHHHCCEEECCHHHHHHHHHHHHHH-CCCCCCCCEEEEECCCCCCC
T ss_conf 99974890678368999999999997-39999999799990788768
No 177
>cd01467 vWA_BatA_type VWA BatA type: Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses. In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if
Probab=25.01 E-value=43 Score=13.34 Aligned_cols=86 Identities=15% Similarity=0.171 Sum_probs=46.9
Q ss_pred CCHHHHHHHHHHHHHHHCCHHHCCEEEEECCCCCCCCHHHH--HHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHH
Q ss_conf 59999999999999972795786899994578875460058--8886320268773589841420358889987899997
Q gi|254781019|r 49 EDIVTMAAAAALPIMQNQDKNLIDTLFFATESSVDQSKSAA--IWLHKLLGLNSSCRVVELKQACYSATCALHMACALVA 126 (396)
Q Consensus 49 Ed~~tmA~~Aa~~~L~~~~~~~Id~li~~T~t~~~~~~~~a--~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i~ 126 (396)
.+-++.|-++++.++++..-+.++++.|++.... ..|.+. ..+.+.|. .+...... +-...-.||..|..++.
T Consensus 23 ~~rl~~ak~~~~~~i~~~~~drvglv~Fs~~a~~-~~plT~d~~~~~~~l~---~i~~~~~~-ggT~i~~al~~a~~~l~ 97 (180)
T cd01467 23 PSRLEAAKEVLSDFIDRRENDRIGLVVFAGAAFT-QAPLTLDRESLKELLE---DIKIGLAG-QGTAIGDAIGLAIKRLK 97 (180)
T ss_pred CCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEE-ECCCCCCHHHHHHHHH---CCCCCCCC-CCCCHHHHHHHHHHHHH
T ss_conf 5899999999999997199975999997287367-3376656899999986---22445323-68608999999999764
Q ss_pred CCC-CCEEEEEECC
Q ss_conf 399-9769995033
Q gi|254781019|r 127 KSP-ERKVLIVASD 139 (396)
Q Consensus 127 sg~-~~~aLVV~sD 139 (396)
... ..+++|+-+|
T Consensus 98 ~~~~~~~~ivLlTD 111 (180)
T cd01467 98 NSEAKERVIVLLTD 111 (180)
T ss_pred CCCCCCCEEEEEEC
T ss_conf 24766637999805
No 178
>pfam08704 GCD14 tRNA methyltransferase complex GCD14 subunit. GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA.
Probab=24.97 E-value=16 Score=15.96 Aligned_cols=38 Identities=16% Similarity=0.079 Sum_probs=24.8
Q ss_pred CHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHH
Q ss_conf 60058888632026877358984142035888998789
Q gi|254781019|r 85 SKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMAC 122 (396)
Q Consensus 85 ~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~ 122 (396)
.|.-++++...|++.+..+.++-.-+-.+.+.+|..|.
T Consensus 87 YpkD~s~I~~~ldi~PG~~VlEaGtGSGsLT~~Larav 124 (309)
T pfam08704 87 YTPDISLIIMMLELKPGSVVCESGTGSGSLSHAIARTV 124 (309)
T ss_pred CCCCHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHH
T ss_conf 56009999998098999999983678429999999974
No 179
>COG0133 TrpB Tryptophan synthase beta chain [Amino acid transport and metabolism]
Probab=24.76 E-value=44 Score=13.31 Aligned_cols=141 Identities=16% Similarity=0.037 Sum_probs=63.8
Q ss_pred EEECCCEEEC-HHHHHHHCC---CCHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCHHHCCEEEEECCCCCCC
Q ss_conf 8734890455-999998709---998797630383246655998599999999999999727957868999945788754
Q gi|254781019|r 9 SFYTTNQYLD-LSVIAEKYR---LDVAKFYVGIGQERMSVLNPDEDIVTMAAAAALPIMQNQDKNLIDTLFFATESSVDQ 84 (396)
Q Consensus 9 ~~y~P~~~v~-~~~l~~~~g---~~~~k~~~~lGi~~r~v~~~~Ed~~tmA~~Aa~~~L~~~~~~~Id~li~~T~t~~~~ 84 (396)
|-|+|+.-+. ..||++++. .|++...+ +-..-|.++ -..++++.|-+-.+.+=.++=.+.=|++-.+.
T Consensus 14 G~yVpE~Lmpal~eLe~ay~~~~~D~~F~~e-l~~~l~~Y~-GRptpLy~a~~Lt~~~gakiyLKREDL~HtGA------ 85 (396)
T COG0133 14 GQYVPETLMPALEELEKAYEKAKNDPEFQAE-LDYLLKDYA-GRPTPLYFAERLTEHLGAKIYLKREDLNHTGA------ 85 (396)
T ss_pred CEECHHHHHHHHHHHHHHHHHHHCCHHHHHH-HHHHHHHHC-CCCCHHHHHHHHHHHHCCEEEEEHHHHCCCCH------
T ss_conf 8866588899999999999997219999999-999999857-99981178887777539568985444146532------
Q ss_pred CHHHH----HHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCC-CCCCCEEE
Q ss_conf 60058----88863202687735898414203588899878999973999769995033201458887533-47830246
Q gi|254781019|r 85 SKSAA----IWLHKLLGLNSSCRVVELKQACYSATCALHMACALVAKSPERKVLIVASDVARYDLGSSGEP-TQGCGAVA 159 (396)
Q Consensus 85 ~~~~a----~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~~~~~~~~-t~GaGA~A 159 (396)
-|-+. +.++.++|-. . -..+...+.-|-..|+..|.- |..-.+-.=+.|+.+..++ -.|+ ..||--+.
T Consensus 86 HKiNN~lGQ~LLAkrMGK~-r-iIAETGAGQHGVAtAta~A~f----gl~C~iYMGa~Dv~RQ~~N-VfRM~LlGA~V~p 158 (396)
T COG0133 86 HKINNALGQALLAKRMGKT-R-IIAETGAGQHGVATATAAALF----GLECVIYMGAEDVERQALN-VFRMRLLGAEVVP 158 (396)
T ss_pred HHHHHHHHHHHHHHHHCCC-E-EEEECCCCCCCHHHHHHHHHH----CCCEEEEECCHHHHHCCCC-HHHHHHCCCEEEE
T ss_conf 6678899999999982884-4-886148873207999999982----9954999461565440522-1323325866888
Q ss_pred EEECC
Q ss_conf 88426
Q gi|254781019|r 160 ILISS 164 (396)
Q Consensus 160 llv~~ 164 (396)
+-.+.
T Consensus 159 V~sGs 163 (396)
T COG0133 159 VTSGS 163 (396)
T ss_pred ECCCC
T ss_conf 41687
No 180
>pfam04298 Zn_peptidase_2 Putative neutral zinc metallopeptidase. Zinc metallopeptidase zinc binding regions have been predicted in some family members by a pattern match (Prosite:PS00142).
Probab=24.50 E-value=44 Score=13.28 Aligned_cols=18 Identities=17% Similarity=-0.049 Sum_probs=9.8
Q ss_pred HHHHHCCCCCCHHHHHHH
Q ss_conf 889742722389999999
Q gi|254781019|r 334 QHIINSRIPISYQVYCDL 351 (396)
Q Consensus 334 ~~~L~~r~~l~~~~y~~~ 351 (396)
...|++...++.+++...
T Consensus 173 l~~L~~~g~l~~~e~~~a 190 (222)
T pfam04298 173 LAILESGGILSPEELKGA 190 (222)
T ss_pred HHHHHHCCCCCHHHHHHH
T ss_conf 999997699887889999
No 181
>pfam02353 CMAS Cyclopropane-fatty-acyl-phospholipid synthase. This family consist of Cyclopropane-fatty-acyl-phospholipid synthase or CFA synthase EC:2.1.1.79 this enzyme catalyse the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid <= S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid.
Probab=24.05 E-value=45 Score=13.23 Aligned_cols=91 Identities=14% Similarity=0.042 Sum_probs=40.4
Q ss_pred CHHHHHHHCCCCHHHHHHHCCCCEEEE----CCCCCCHHHHHHHHH-HHHHHHCCHHHCCE-EEEECCCCCCCCHHHHHH
Q ss_conf 599999870999879763038324665----599859999999999-99997279578689-999457887546005888
Q gi|254781019|r 18 DLSVIAEKYRLDVAKFYVGIGQERMSV----LNPDEDIVTMAAAAA-LPIMQNQDKNLIDT-LFFATESSVDQSKSAAIW 91 (396)
Q Consensus 18 ~~~~l~~~~g~~~~k~~~~lGi~~r~v----~~~~Ed~~tmA~~Aa-~~~L~~~~~~~Id~-li~~T~t~~~~~~~~a~~ 91 (396)
+.+.|+.+-+++.+.+..-|+- +|.+ ....++++.-|-.+- ..++++.++++=+. |-.|. -.-+.+.+
T Consensus 6 ~~~nI~~HYDl~ndFy~~~Ld~-~m~YSca~f~~~~~tLe~AQ~~Kl~~i~~~l~l~~g~~vLDiGC-----GWG~~a~~ 79 (273)
T pfam02353 6 DAENIQAHYDLSNDFFALFLDP-TMTYSCAYFERPDMTLEEAQQAKLDLILDKLGLKPGMTLLDIGC-----GWGGLMRR 79 (273)
T ss_pred HHHHHHHHCCCCHHHHHHHCCC-CCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECC-----CCHHHHHH
T ss_conf 9999999758988999987696-99886557179999999999999999998658899998999788-----80899999
Q ss_pred HHHHHCCCCCCEEEEECCCHHHHHH
Q ss_conf 8632026877358984142035888
Q gi|254781019|r 92 LHKLLGLNSSCRVVELKQACYSATC 116 (396)
Q Consensus 92 v~~~Lgl~~~~~~~Di~~aC~g~~~ 116 (396)
+++..|. .+-++.++.....++.
T Consensus 80 ~a~~~g~--~v~giTlS~~Q~~~~~ 102 (273)
T pfam02353 80 AAERYDV--NVVGLTLSKNQYKLAR 102 (273)
T ss_pred HHHHCCC--EEEEEECCHHHHHHHH
T ss_conf 9984795--1899979789999999
No 182
>TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN; InterPro: IPR011975 This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in . This enzyme is related to aldehyde dehydrogenase family. This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate entry, IPR011966 from INTERPRO..
Probab=23.33 E-value=47 Score=13.14 Aligned_cols=85 Identities=14% Similarity=0.156 Sum_probs=50.7
Q ss_pred HHHHHHHHHHHHHHHCCHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHH---HHHC
Q ss_conf 9999999999999727957868999945788754600588886320268773589841420358889987899---9973
Q gi|254781019|r 51 IVTMAAAAALPIMQNQDKNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACA---LVAK 127 (396)
Q Consensus 51 ~~tmA~~Aa~~~L~~~~~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~---~i~s 127 (396)
++-|.|+.||..|..+|-| -++|.++-.++-+ -+.+.|-+.|.++.+|.+.+-.=|=-=.++|.. |-+-
T Consensus 240 P~AltV~vAreVL~EaGfD-P~lV~Laa~~p~~-------~~Aq~LAl~P~vr~vDFTGS~AFG~WLe~nArQAqVYtEk 311 (560)
T TIGR02288 240 PLALTVQVAREVLGEAGFD-PNLVALAAEDPGE-------EVAQRLALDPAVRIVDFTGSNAFGEWLEQNARQAQVYTEK 311 (560)
T ss_pred HHHHHHHHHHHHHHHHCCC-HHHHHHCCCCCCC-------HHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 2678889999998741677-3020011258884-------3788851399538886258871126899866798888875
Q ss_pred CCCCEEEEEECCCCCC
Q ss_conf 9997699950332014
Q gi|254781019|r 128 SPERKVLIVASDVARY 143 (396)
Q Consensus 128 g~~~~aLVV~sD~~~~ 143 (396)
-..++++|=++|..+.
T Consensus 312 AGvN~viieSTddlka 327 (560)
T TIGR02288 312 AGVNTVIIESTDDLKA 327 (560)
T ss_pred CCCCCEEECCHHHHHH
T ss_conf 0667158724166899
No 183
>PRK09585 anmK anhydro-N-acetylmuramic acid kinase; Reviewed
Probab=22.65 E-value=48 Score=13.06 Aligned_cols=56 Identities=16% Similarity=0.203 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHCC--HHHCCEEEEECCCCCCCCHH--------HHHHHHHHHCCCC--CCEEEEECCC
Q ss_conf 99999999997279--57868999945788754600--------5888863202687--7358984142
Q gi|254781019|r 54 MAAAAALPIMQNQD--KNLIDTLFFATESSVDQSKS--------AAIWLHKLLGLNS--SCRVVELKQA 110 (396)
Q Consensus 54 mA~~Aa~~~L~~~~--~~~Id~li~~T~t~~~~~~~--------~a~~v~~~Lgl~~--~~~~~Di~~a 110 (396)
.=++|+++++++.+ +++||+|-+--+| +.+.|. ....|++.+|++. +-|..|+..+
T Consensus 72 ~~~~~i~~~i~~~~~~~~~id~Ig~HGQT-i~H~P~~~~TlQiG~~~~ia~~tgi~VV~DFR~~Dia~G 139 (366)
T PRK09585 72 LFAEAVNALLAEAGLSPEDIDAIGSHGQT-VRHRPERGFTLQIGDGALLAELTGITVVADFRRRDVAAG 139 (366)
T ss_pred HHHHHHHHHHHHCCCCCCCEEEEECCCCC-EEECCCCCEEEECCCHHHHHHHHCCCEEHHHHHHHHHCC
T ss_conf 99999999999849980363289758887-687158863543398899998819976075379898677
No 184
>TIGR02707 butyr_kinase butyrate kinase; InterPro: IPR011245 This group represents bacterial butyrate kinase, an enzyme that facilitates the formation of butyryl-CoA by phosphorylating butyrate in the presence of ATP to form butyryl phosphate . The final steps in butyrate synthesis by anaerobic bacteria can occur via butyrate kinase and phosphotransbutyrylase or via butyryl-CoA:acetate CoA-transferase, the latter providing the dominant route for butyrate formation in human colonic bacteria .; GO: 0005524 ATP binding, 0047761 butyrate kinase activity, 0016310 phosphorylation, 0005737 cytoplasm.
Probab=21.89 E-value=50 Score=12.96 Aligned_cols=28 Identities=18% Similarity=0.216 Sum_probs=20.9
Q ss_pred HHHHHHHHHHCCCCHHHCCEEEECCCCC
Q ss_conf 9999999996298821101233114540
Q gi|254781019|r 210 EAVWHDYQKNKGHDFNDFQYFCYHQPFT 237 (396)
Q Consensus 210 ~~a~~~~l~~~g~~~~did~~v~H~p~~ 237 (396)
+.+.+++.+..|.+.++.+.+|.|..++
T Consensus 158 KAvARr~A~e~gK~YE~~N~ivaHlGGG 185 (353)
T TIGR02707 158 KAVARRIAKELGKRYEEMNLIVAHLGGG 185 (353)
T ss_pred HHHHHHHHHHCCCCCCCCCEEEEECCCC
T ss_conf 8999999997289600445489982887
No 185
>pfam02514 CobN-Mg_chel CobN/Magnesium Chelatase. This family contains a domain common to the cobN protein and to magnesium protoporphyrin chelatase. CobN is implicated in the conversion of hydrogenobyrinic acid a,c-diamide to cobyrinic acid. Magnesium protoporphyrin chelatase is involved in chlorophyll biosynthesis.
Probab=21.74 E-value=50 Score=12.94 Aligned_cols=13 Identities=23% Similarity=0.197 Sum_probs=4.4
Q ss_pred CCCCCHHHHHHHH
Q ss_conf 8754600588886
Q gi|254781019|r 81 SVDQSKSAAIWLH 93 (396)
Q Consensus 81 ~~~~~~~~a~~v~ 93 (396)
+.|...|+..+++
T Consensus 264 ~LDv~~Sl~~iL~ 276 (1064)
T pfam02514 264 GLDVPASLVNLLR 276 (1064)
T ss_pred CCCHHHHHHHHHH
T ss_conf 5373999999999
No 186
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=21.21 E-value=51 Score=12.88 Aligned_cols=49 Identities=24% Similarity=0.445 Sum_probs=30.7
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECC---------CCCHHHHHHHHHHC
Q ss_conf 6016989999999999999996298821101233114---------54057888886411
Q gi|254781019|r 198 GKYSTKIYLQSLEAVWHDYQKNKGHDFNDFQYFCYHQ---------PFTRMAEKAHIRLS 248 (396)
Q Consensus 198 g~~~~~~y~~~~~~a~~~~l~~~g~~~~did~~v~H~---------p~~k~~~~~~~~l~ 248 (396)
|.++.+. ++.+.+-+.+.+.+.|..+++| ++|+|- |.+.|..++..+..
T Consensus 60 G~~t~~~-~~~i~~~m~~~l~~~g~~id~i-y~CPh~p~~~c~cRKP~pGMl~~a~~~~~ 117 (181)
T PRK08942 60 GLFTEAQ-LNALHEKMDWSLADRGGDLDGI-YYCPHHPEDGCDCRKPKPGMLLSIAERLN 117 (181)
T ss_pred CCCCHHH-HHHHHHHHHHHHHHCCCCEEEE-EECCCCCCCCCCCCCCCCHHHHHHHHHCC
T ss_conf 8677999-9999999999999769943137-87689971447788998499999999809
No 187
>pfam00670 AdoHcyase_NAD S-adenosyl-L-homocysteine hydrolase, NAD binding domain.
Probab=21.17 E-value=52 Score=12.87 Aligned_cols=21 Identities=24% Similarity=0.349 Sum_probs=12.3
Q ss_pred HHHHCCCCCCCCEEEEEEECC
Q ss_conf 997157436988899984079
Q gi|254781019|r 289 LLDHSSENLAGKRVGFFSYGS 309 (396)
Q Consensus 289 lLe~~~~~~~G~rIll~syGs 309 (396)
++.....+..|++++.+|||-
T Consensus 13 i~r~tn~llaGk~vvV~GYG~ 33 (162)
T pfam00670 13 IKRATDVMIAGKVAVVCGYGD 33 (162)
T ss_pred HHHHHCCEECCCEEEEECCCC
T ss_conf 988617657487899967876
No 188
>TIGR01246 dapE_proteo succinyl-diaminopimelate desuccinylase; InterPro: IPR005941 The lysine/diaminopimelic acid branch of the aspartate pathway produces the essential amino acid lysine via the intermediate meso-diaminopimelic acid (meso-DAP), which is also a vital cell wall component in Gram-negative bacteria . The production of dihydropicolinate from aspartate-semialdehyde controls flux into the lysine/diaminopimelic acid pathway. Three variants of this pathway exist, differing in how tetrahydropicolinate (formed by reduction of dihydropicolinate) is metabolised to meso-DAP. One variant, the most commonly found one in archaea and bacteria, uses primarily succinyl intermediates, while a second variant, found only in Bacillus, utilises primarily acetyl intermediates. In the third variant, found in some Gram-positive bacteria, a dehydrogenase converts tetrahydropicolinate directly to meso-DAP. In all variants meso-DAP is subsequently converted to lysine by a decarboxylase, or, in Gram-negative bacteria, assimilated into the cell wall. Evidence exists that a fourth, currently unknown, variant of this pathway may function in plants . Succinyl-diaminopimelate desuccinylase (3.5.1.18 from EC) hydrolyses N-succinyl-L,L-diaminopimelic acid which is required for the bacterial synthesis of lysine and meso-diaminopimelic acid. This group of bacterial sequences belong to the MEROPS peptidase family M20 (clan MH), subfamily M20A (non-peptidase homologs). ; GO: 0009014 succinyl-diaminopimelate desuccinylase activity, 0009089 lysine biosynthetic process via diaminopimelate.
Probab=21.13 E-value=52 Score=12.87 Aligned_cols=201 Identities=20% Similarity=0.190 Sum_probs=98.2
Q ss_pred CCEEEECCCCCCHHHHHHHHHHHH---------------HHHCCH----HHCCEEEEECCC-----CCCC---C-HHHHH
Q ss_conf 324665599859999999999999---------------972795----786899994578-----8754---6-00588
Q gi|254781019|r 39 QERMSVLNPDEDIVTMAAAAALPI---------------MQNQDK----NLIDTLFFATES-----SVDQ---S-KSAAI 90 (396)
Q Consensus 39 i~~r~v~~~~Ed~~tmA~~Aa~~~---------------L~~~~~----~~Id~li~~T~t-----~~~~---~-~~~a~ 90 (396)
|+..||.+.|++...|=++-.+++ ..+.+- +.=-.|.|+--| |++. + ||...
T Consensus 9 is~pSVTP~D~Gcq~~Ia~rL~~~gF~~e~~~f~d~kN~wa~~g~aif~~~~P~l~F~GHtDVVP~G~~e~W~~s~PF~p 88 (383)
T TIGR01246 9 ISRPSVTPNDAGCQDLIAERLKKIGFEIEILHFGDTKNLWATRGTAIFKDGEPVLAFAGHTDVVPAGPLEQWSSSPPFEP 88 (383)
T ss_pred HCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 03788899847789999999845397589985087344454557146508876588746212113888877888769663
Q ss_pred HHHH-HHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCC---CC-CEEEEEECCC---CC--------------CCCCC-
Q ss_conf 8863-2026877358984142035888998789999739---99-7699950332---01--------------45888-
Q gi|254781019|r 91 WLHK-LLGLNSSCRVVELKQACYSATCALHMACALVAKS---PE-RKVLIVASDV---AR--------------YDLGS- 147 (396)
Q Consensus 91 ~v~~-~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i~sg---~~-~~aLVV~sD~---~~--------------~~~~~- 147 (396)
.+.. .|=.+ -+.||+.+-++|+.| |..||+.+ ++ +-+|+|+||= +. +.+|+
T Consensus 89 ~~~dG~lYGR---GAaDMKGs~Aafv~A---aerFv~~~pdhkGa~islLiTSDEEG~A~dGT~~vve~L~~r~~~IDyc 162 (383)
T TIGR01246 89 VERDGKLYGR---GAADMKGSLAAFVVA---AERFVKKNPDHKGASISLLITSDEEGEAIDGTKKVVETLMARDELIDYC 162 (383)
T ss_pred EEECCCEECC---CCCCHHHHHHHHHHH---HHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEE
T ss_conf 4621217626---562146789999999---9999984777784053443330001331136889999999725899789
Q ss_pred -CCCCC----CCCCEEEEEECCCCCC---CEEEECCCC------------------------CCCCCCCCCCCCC-----
Q ss_conf -75334----7830246884268763---035310001------------------------5678651127588-----
Q gi|254781019|r 148 -SGEPT----QGCGAVAILISSQTSI---LEIEDITGI------------------------YTNDCMDFWRPNY----- 190 (396)
Q Consensus 148 -~~~~t----~GaGA~Allv~~~~~~---~~~~~~~~~------------------------~~~~~~df~rp~~----- 190 (396)
-+||| -|| .+=+|++..+ +.+.+..|+ ...+-.+|+.|..
T Consensus 163 ~VGEPss~k~~GD---~iK~GRRGSi~g~L~i~G~QGHVAYPh~A~NP~H~~~p~L~~L~~~~lD~G~e~F~ptsl~I~N 239 (383)
T TIGR01246 163 IVGEPSSVKKLGD---VIKNGRRGSITGNLTIKGIQGHVAYPHLANNPVHKAAPVLAELTAIKLDEGNEFFPPTSLQITN 239 (383)
T ss_pred EEECCCCCCCCCC---EEEECCCEEEEEEEEEEEEECCCCCHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECC
T ss_conf 8606535111688---6784231135444789887511046454158703699999998611288963435897532245
Q ss_pred -------------CCCEEECCHHHHHHHHHHHHHHHHHHHHHC----CCCHHHCCEEEE----CCC--CCHHHHHHHHHH
Q ss_conf -------------754235660169899999999999999962----988211012331----145--405788888641
Q gi|254781019|r 191 -------------RRTALVDGKYSTKIYLQSLEAVWHDYQKNK----GHDFNDFQYFCY----HQP--FTRMAEKAHIRL 247 (396)
Q Consensus 191 -------------~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~----g~~~~did~~v~----H~p--~~k~~~~~~~~l 247 (396)
.-+..++=||+.+.-.+.+++-+...++++ +++. ++.|-.= =|. -+++++++...+
T Consensus 240 I~aGtG~~NVIPg~L~v~FN~Rfs~e~~~e~~k~~v~~il~~hCkeY~l~Y-~lew~~Sg~pFlT~P~~g~l~~~~~~~i 318 (383)
T TIGR01246 240 IHAGTGANNVIPGELKVQFNIRFSTEVSEETLKSRVEAILDQHCKEYGLDY-DLEWSLSGEPFLTNPIDGKLIDKVREAI 318 (383)
T ss_pred CCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCE-EEEECCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 578889887661112001341028667717899999999974220038841-6987215855278888763899999999
Q ss_pred CC
Q ss_conf 10
Q gi|254781019|r 248 SK 249 (396)
Q Consensus 248 ~~ 249 (396)
.+
T Consensus 319 ~~ 320 (383)
T TIGR01246 319 EE 320 (383)
T ss_pred HH
T ss_conf 99
No 189
>cd05125 Mth938_2P1-like Mth938_2P1-like domain. This model contains sequences that are similar to 2P1, a partially characterized nuclear protein, which is homologous to E3-3 from rat and known to be alternatively spliced. Its function is unknown. This family is part of the Mth938 family, for which structures, but no functional data are available.
Probab=21.08 E-value=52 Score=12.86 Aligned_cols=42 Identities=24% Similarity=0.362 Sum_probs=27.4
Q ss_pred HCCEEEEECCCCCCC-CHHHHHHHHHHHCCCCCCEEEEECCCHHHH
Q ss_conf 868999945788754-600588886320268773589841420358
Q gi|254781019|r 70 LIDTLFFATESSVDQ-SKSAAIWLHKLLGLNSSCRVVELKQACYSA 114 (396)
Q Consensus 70 ~Id~li~~T~t~~~~-~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~ 114 (396)
.+|.|++||-..... .|..-..+ +..|+ .+.++|...||.-|
T Consensus 54 ~peilliGtG~~~~~~~~~~~~~l-~~~gI--~vE~M~T~aAcrTy 96 (114)
T cd05125 54 RPEILVIGTGRKSRPLSPELRKYF-KKLGI--AVEVVDTRNACATF 96 (114)
T ss_pred CCCEEEECCCCCCCCCCHHHHHHH-HHCCC--EEEEECHHHHHHHH
T ss_conf 999999866998778999999999-97599--17995839999998
No 190
>TIGR02771 TraF_Ti conjugative transfer signal peptidase TraF; InterPro: IPR014139 Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes . They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence . Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases . Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base . The geometric orientations of the catalytic residues are similar between families, despite different protein folds . The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) , . Peptidases are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry. Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. This entry contains the conjugative transfer signal peptidase (TraF), which belongs to MEROPS peptidase family S26, subfamily S26C (TraF signal peptidase, clan SF). It is found in operons that encode elements of conjugative transfer systems. This family is homologous to a broader family of signal (leader) peptidases such as LepB. This family is present in both Ti-type and I-type conjugative systems ..
Probab=20.93 E-value=52 Score=12.84 Aligned_cols=30 Identities=33% Similarity=0.274 Sum_probs=22.5
Q ss_pred CCCCCHHHHHHHH-HHHHCCCCCCCCEEEEEE
Q ss_conf 5432338999999-997157436988899984
Q gi|254781019|r 276 NSYTASLYIALIS-LLDHSSENLAGKRVGFFS 306 (396)
Q Consensus 276 N~~SASi~l~L~s-lLe~~~~~~~G~rIll~s 306 (396)
|+ |.|+|+.|.. +.+.+.+...|+-|++|=
T Consensus 30 N~-t~S~P~g~y~r~~~~~~~v~~G~yV~fcp 60 (183)
T TIGR02771 30 NT-TKSLPLGLYWRLTTSSKPVERGDYVVFCP 60 (183)
T ss_pred EC-CCCCHHHHHHHHHHHCCCCCCCCEEEEEC
T ss_conf 30-34533776655653126877787789835
No 191
>cd00248 Mth938-like Mth938-like domain. The members of this family include: Mth938, 2P1, Xcr35, Rpa2829, and several uncharacterized sequences. Mth938 is a hypothetical protein encoded by the Methanobacterium thermoautotrophicum (Mth) genome. This protein crystallizes as a dimer, although it is monomeric in solution, with one disulfide bond in each monomer. 2P1 is a partially characterized nuclear protein which is homologous to E3-3 from rat and known to be alternately spliced. Xcr35 and Rpa2829 are hypothetical proteins of unknown function from the Xanthomonas campestris and Rhodopseudomonas palustris genomes, respectively, for which the crystal structures have been determined.
Probab=20.72 E-value=53 Score=12.81 Aligned_cols=60 Identities=18% Similarity=0.318 Sum_probs=35.2
Q ss_pred CCHHHHHHHHHHHHHHHCCHHHCCEEEEECCCCCCCCH-HHHHHHHHHHCCCCCCEEEEECCCHHHH
Q ss_conf 59999999999999972795786899994578875460-0588886320268773589841420358
Q gi|254781019|r 49 EDIVTMAAAAALPIMQNQDKNLIDTLFFATESSVDQSK-SAAIWLHKLLGLNSSCRVVELKQACYSA 114 (396)
Q Consensus 49 Ed~~tmA~~Aa~~~L~~~~~~~Id~li~~T~t~~~~~~-~~a~~v~~~Lgl~~~~~~~Di~~aC~g~ 114 (396)
++..++..+....+++. ..++.|++||-......+ .....+ ...|. .+.+++...||.-|
T Consensus 34 ~~~~~i~~~~l~~~l~~---~~peilliGtG~~~~~~~~~~~~~l-~~~gI--~~E~M~T~aAcrTf 94 (109)
T cd00248 34 TSLSDLDPEALLPLLAE---DRPDILLIGTGAEIAFLPRALRAAL-RAAGI--GVEVMSTGAACRTY 94 (109)
T ss_pred CCHHHCCHHHHHHHHCC---CCCCEEEECCCCCCCCCCHHHHHHH-HHCCC--EEEEECHHHHHHHH
T ss_conf 88112799999999736---8984899865897778999999999-98799--49996709999999
No 192
>pfam00012 HSP70 Hsp70 protein. Hsp70 chaperones help to fold many proteins. Hsp70 assisted folding involves repeated cycles of substrate binding and release. Hsp70 activity is ATP dependent. Hsp70 proteins are made up of two regions: the amino terminus is the ATPase domain and the carboxyl terminus is the substrate binding region.
Probab=20.63 E-value=53 Score=12.80 Aligned_cols=37 Identities=8% Similarity=-0.026 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCCHHHH
Q ss_conf 9999999999999962988211012331145405788
Q gi|254781019|r 205 YLQSLEAVWHDYQKNKGHDFNDFQYFCYHQPFTRMAE 241 (396)
Q Consensus 205 y~~~~~~a~~~~l~~~g~~~~did~~v~H~p~~k~~~ 241 (396)
.++.+...+++.++.++++.+||+.+++.-+..+|+.
T Consensus 304 l~~r~~~~i~~~L~~a~l~~~dId~ViLvGGssRiP~ 340 (598)
T pfam00012 304 LFERTLEPVEKALKDAKLSKSEIDEVVLVGGSTRIPA 340 (598)
T ss_pred HHHHHHHHHHHHHHHHCCCHHHEEEEEECCCCCCCHH
T ss_conf 9999999998789872899545125786188656768
No 193
>PRK09605 O-sialoglycoprotein endopeptidase/protein kinase; Reviewed
Probab=20.56 E-value=53 Score=12.79 Aligned_cols=78 Identities=12% Similarity=0.152 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHCC--HHHCCEEEEECCCCCCCCHHH--HHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCC-
Q ss_conf 99999999997279--578689999457887546005--8888632026877358984142035888998789999739-
Q gi|254781019|r 54 MAAAAALPIMQNQD--KNLIDTLFFATESSVDQSKSA--AIWLHKLLGLNSSCRVVELKQACYSATCALHMACALVAKS- 128 (396)
Q Consensus 54 mA~~Aa~~~L~~~~--~~~Id~li~~T~t~~~~~~~~--a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i~sg- 128 (396)
-....++++|++++ ++|||.|-+ +.+|-..++. -...++.|.+.-+.+.+-++| |-|=+. ...+.++
T Consensus 52 ~i~~vv~~aL~~A~i~~~dIdaIA~--T~GPGL~g~L~VG~~~Ak~La~~~~~PligVnH-~~gHi~-----~~rl~~~~ 123 (536)
T PRK09605 52 AIPKVIKEALEEAGIKKGDIDLVAF--SQGPGLGPCLRVVATAARALALSLDVPLIGVNH-CIAHVE-----IGRLTTGA 123 (536)
T ss_pred HHHHHHHHHHHHCCCCHHHCCEEEE--CCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCH-HHHHHH-----HHHHCCCC
T ss_conf 9999999999984999888989999--069981786899999999999984998500340-898874-----42310698
Q ss_pred CCCEEEEEECC
Q ss_conf 99769995033
Q gi|254781019|r 129 PERKVLIVASD 139 (396)
Q Consensus 129 ~~~~aLVV~sD 139 (396)
...-+|+|+.-
T Consensus 124 ~~Pl~L~VSGG 134 (536)
T PRK09605 124 RDPVTLYVSGG 134 (536)
T ss_pred CCCCEEEEECC
T ss_conf 78856999768
No 194
>cd06449 ACCD Aminocyclopropane-1-carboxylate deaminase (ACCD): Pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of 1-aminocyclopropane-L-carboxylate (ACC), a precursor of the plant hormone ethylene, to alpha-ketobutyrate and ammonia.
Probab=20.44 E-value=53 Score=12.78 Aligned_cols=34 Identities=24% Similarity=0.369 Sum_probs=28.4
Q ss_pred CCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEC
Q ss_conf 38543233899999999715743698889998407
Q gi|254781019|r 274 IGNSYTASLYIALISLLDHSSENLAGKRVGFFSYG 308 (396)
Q Consensus 274 ~GN~~SASi~l~L~slLe~~~~~~~G~rIll~syG 308 (396)
+-.+|||-.+.+|..++. .++..+|++|+++--|
T Consensus 273 lDPvYTgKa~~gl~~~i~-~g~~~~~~~IlfiHTG 306 (307)
T cd06449 273 TDPVYEGKSMQGMIDLVR-NGEFKEGSKVLFIHLG 306 (307)
T ss_pred CCCHHHHHHHHHHHHHHH-CCCCCCCCCEEEEECC
T ss_conf 370278999999999998-6999997918999599
No 195
>PRK05305 phosphatidylserine decarboxylase; Provisional
Probab=20.34 E-value=54 Score=12.77 Aligned_cols=22 Identities=27% Similarity=0.504 Sum_probs=17.0
Q ss_pred HHCCCCCCCCEEEEEEECCCCC
Q ss_conf 7157436988899984079830
Q gi|254781019|r 291 DHSSENLAGKRVGFFSYGSGCV 312 (396)
Q Consensus 291 e~~~~~~~G~rIll~syGsG~~ 312 (396)
+....++.|+|+++.-|||-.+
T Consensus 163 ~~g~~l~~G~r~G~I~fGSrvd 184 (214)
T PRK05305 163 EEGDELERGERFGLIRFGSRVD 184 (214)
T ss_pred CCCCEEECCCEEEEEECCCCEE
T ss_conf 7897885377773796087279
Done!