Query         gi|254781019|ref|YP_003065432.1| hydroxymethylglutaryl-coenzyme A synthase [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 396
No_of_seqs    215 out of 2307
Neff          8.2 
Searched_HMMs 39220
Date          Mon May 30 04:52:11 2011
Command       /home/congqian_1/programs/hhpred/hhsearch -i 254781019.hhm -d /home/congqian_1/database/cdd/Cdd.hhm 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 TIGR01835 HMG-CoA-S_prok hydro 100.0       0       0  741.8  20.7  383    3-385     1-412 (412)
  2 TIGR01833 HMG-CoA-S_euk hydrox 100.0       0       0  676.6  21.4  386    2-388     4-461 (461)
  3 COG3425 PksG 3-hydroxy-3-methy 100.0       0       0  656.5  34.3  375    1-388     1-377 (377)
  4 KOG1393 consensus              100.0       0       0  569.9  25.9  391    2-393    11-459 (462)
  5 PRK04262 hypothetical protein; 100.0       0       0  558.7  33.7  339    1-354     1-343 (346)
  6 TIGR00747 fabH 3-oxoacyl-(acyl 100.0       0       0  442.8  22.5  298    1-312     1-321 (329)
  7 PRK09352 3-oxoacyl-(acyl carri 100.0       0       0  400.6  31.4  298    1-314     2-313 (319)
  8 PRK09258 3-oxoacyl-(acyl carri 100.0       0       0  401.3  27.6  299    3-315     1-334 (339)
  9 COG0332 FabH 3-oxoacyl-[acyl-c 100.0       0       0  401.1  27.8  299    1-314     2-316 (323)
 10 PRK07204 3-oxoacyl-(acyl carri 100.0       0       0  391.6  29.4  296    2-312     4-321 (329)
 11 PRK06816 3-oxoacyl-(acyl carri 100.0       0       0  391.6  28.8  310    1-321     1-378 (378)
 12 PRK12879 3-oxoacyl-(acyl carri 100.0       0       0  386.8  31.2  298    3-316     5-321 (326)
 13 CHL00203 fabH 3-oxoacyl-acyl-c 100.0       0       0  386.6  31.4  295    3-314     1-319 (327)
 14 PRK07515 3-oxoacyl-(acyl carri 100.0       0       0  389.1  24.9  295    2-312     2-363 (372)
 15 PRK05963 3-oxoacyl-(acyl carri 100.0       0       0  384.0  28.8  294    3-312     5-319 (327)
 16 cd00830 KAS_III Ketoacyl-acyl  100.0       0       0  382.7  29.6  296    2-313     1-315 (320)
 17 PRK06840 hypothetical protein; 100.0       0       0  378.8  29.1  296    1-313     3-328 (337)
 18 PRK12880 3-oxoacyl-(acyl carri 100.0       0       0  376.7  26.9  293    2-312     7-330 (353)
 19 cd00827 init_cond_enzymes "ini 100.0       0       0  366.5  28.1  300    2-316     1-322 (324)
 20 TIGR00748 HMG_CoA_syn_Arc hydr 100.0       0       0  371.3  17.7  339    2-354     1-344 (347)
 21 pfam08540 HMG_CoA_synt_C Hydro 100.0       0       0  355.8  17.6  218  171-388     4-282 (282)
 22 cd00831 CHS_like Chalcone and  100.0       0       0  332.9  28.7  301    3-315     2-358 (361)
 23 pfam01154 HMG_CoA_synt_N Hydro 100.0       0       0  315.5  18.0  165    2-167     1-171 (171)
 24 COG3424 BcsA Predicted naringe 100.0 2.8E-33 7.3E-38  225.8  25.6  303    4-319     3-351 (356)
 25 cd00327 cond_enzymes Condensin 100.0 6.1E-30 1.6E-34  205.1  20.0  233   46-312     2-248 (254)
 26 pfam00195 Chal_sti_synt_N Chal  99.9   4E-24   1E-28  169.0  16.9  162    4-166    18-228 (228)
 27 pfam08541 ACP_syn_III_C 3-Oxoa  99.6 5.4E-15 1.4E-19  112.2   7.5   85  217-315     1-85  (90)
 28 cd00829 SCP-x_thiolase Thiolas  99.5 3.8E-11 9.7E-16   88.3  20.1  191   47-249    12-293 (375)
 29 cd00825 decarbox_cond_enzymes   99.5 7.2E-12 1.8E-16   92.8  15.2  215   51-290    11-280 (332)
 30 pfam08392 FAE1_CUT1_RppA FAE1/  99.4 6.7E-12 1.7E-16   93.0  14.5  165    2-167     8-208 (290)
 31 PRK06059 lipid-transfer protei  99.4   2E-10   5E-15   83.9  21.9  266   36-309    10-387 (399)
 32 PRK06157 acetyl-CoA acetyltran  99.4 2.6E-09 6.6E-14   76.9  25.0  104   36-141    13-118 (400)
 33 PRK06365 acetyl-CoA acetyltran  99.4 2.1E-09 5.4E-14   77.4  24.4  275   36-314     8-408 (415)
 34 PRK08256 lipid-transfer protei  99.4 1.4E-09 3.5E-14   78.6  23.2   93   46-142    17-111 (391)
 35 PRK12578 acetyl-CoA acetyltran  99.4   6E-10 1.5E-14   80.8  21.1   95   47-142    17-113 (385)
 36 PRK06363 consensus              99.4 4.3E-10 1.1E-14   81.8  19.9  249   47-311    18-374 (387)
 37 PRK06364 consensus              99.3 1.2E-09 3.2E-14   78.9  20.4  252   47-314    21-383 (389)
 38 PRK06158 thiolase; Provisional  99.3 1.6E-09 4.2E-14   78.1  20.8  192   36-248    14-295 (384)
 39 cd00751 thiolase Thiolase are   99.3 2.1E-09 5.2E-14   77.5  20.9   98   47-144    18-117 (386)
 40 PRK06289 acetyl-CoA acetyltran  99.3 4.4E-09 1.1E-13   75.5  22.3  100   43-143    18-122 (408)
 41 PRK08313 acetyl-CoA acetyltran  99.3 1.5E-08 3.9E-13   72.1  24.7   95   46-141    20-117 (391)
 42 PRK06064 acetyl-CoA acetyltran  99.3 7.6E-10 1.9E-14   80.2  17.8   96   47-143    18-117 (389)
 43 PRK07516 acetyl-CoA acetyltran  99.3 2.6E-09 6.6E-14   76.9  20.4   96   47-143    18-117 (389)
 44 PRK06065 acetyl-CoA acetyltran  99.3 4.5E-09 1.2E-13   75.4  21.1  257   36-312    16-383 (393)
 45 cd00826 nondecarbox_cond_enzym  99.3 9.5E-10 2.4E-14   79.6  17.5   98   47-144    19-118 (393)
 46 PRK07800 consensus              99.3 7.8E-10   2E-14   80.1  16.6   99   47-145    22-122 (393)
 47 PRK08235 acetyl-CoA acetyltran  99.3 5.1E-10 1.3E-14   81.3  15.1   98   47-144    22-121 (393)
 48 PRK08371 consensus              99.3 1.6E-09   4E-14   78.2  17.3   96   47-143    18-115 (388)
 49 pfam02797 Chal_sti_synt_C Chal  99.2 6.7E-11 1.7E-15   86.8   9.0  116  192-317    25-146 (151)
 50 cd00834 KAS_I_II Beta-ketoacyl  99.2 7.2E-09 1.8E-13   74.1  18.8  266    1-290     1-352 (406)
 51 PRK06504 acetyl-CoA acetyltran  99.2 6.9E-09 1.8E-13   74.2  16.8  100   46-145    21-123 (390)
 52 PRK07801 acetyl-CoA acetyltran  99.2 4.5E-09 1.2E-13   75.4  15.3   99   47-145    22-123 (382)
 53 PRK07314 3-oxoacyl-(acyl carri  99.2 2.6E-08 6.6E-13   70.7  19.2  261    2-289     3-352 (411)
 54 PRK08242 acetyl-CoA acetyltran  99.1 3.3E-08 8.5E-13   70.0  18.9   99   47-145    24-125 (402)
 55 PRK05952 3-oxoacyl-(acyl carri  99.1 1.8E-07 4.6E-12   65.4  22.6  255    1-290     2-326 (379)
 56 PRK08041 consensus              99.1 1.9E-08 4.8E-13   71.5  16.5   99   47-145    22-122 (391)
 57 PRK08142 acetyl-CoA acetyltran  99.1 1.3E-08 3.4E-13   72.5  15.7   98   36-139    11-110 (388)
 58 pfam08545 ACP_syn_III 3-Oxoacy  99.1 2.1E-10 5.4E-15   83.6   6.4   63  105-167     1-66  (80)
 59 PRK07855 lipid-transfer protei  99.1 2.9E-07 7.3E-12   64.2  21.6   97   36-139    10-109 (386)
 60 PRK06954 acetyl-CoA acetyltran  99.1 3.7E-08 9.4E-13   69.7  17.0   99   47-145    27-127 (397)
 61 TIGR03150 fabF 3-oxoacyl-[acyl  99.1 7.6E-08 1.9E-12   67.8  18.5  265    2-290     2-352 (407)
 62 PRK06445 acetyl-CoA acetyltran  99.1 3.7E-08 9.5E-13   69.7  16.8   98   47-144    28-128 (394)
 63 PRK08947 fadA 3-ketoacyl-CoA t  99.1 4.1E-08   1E-12   69.5  16.9   99   47-145    23-125 (387)
 64 PRK06333 3-oxoacyl-(acyl carri  99.1 1.9E-08 4.8E-13   71.6  14.9  264    2-290     5-364 (424)
 65 PRK06066 acetyl-CoA acetyltran  99.0 1.5E-07 3.8E-12   66.0  17.8  253   36-311     8-370 (375)
 66 PRK05656 acetyl-CoA acetyltran  99.0   4E-07   1E-11   63.3  19.0   99   47-145    22-122 (392)
 67 PRK09051 beta-ketothiolase; Pr  99.0   4E-07   1E-11   63.3  18.9  100   46-145    22-124 (394)
 68 PRK07124 consensus              99.0 1.4E-08 3.6E-13   72.3  11.4   99   47-145    22-122 (402)
 69 smart00825 PKS_KS Beta-ketoacy  98.9 1.3E-07 3.3E-12   66.3  15.7  216   53-290    89-359 (424)
 70 PRK06633 acetyl-CoA acetyltran  98.9 2.1E-06 5.4E-11   58.8  21.9   98   47-144    23-122 (392)
 71 PTZ00050 3-oxoacyl-acyl carrie  98.9 1.7E-07 4.4E-12   65.6  16.2  216   51-290   134-416 (477)
 72 PRK06025 acetyl-CoA acetyltran  98.9 1.3E-06 3.2E-11   60.2  20.3   98   47-144    25-125 (417)
 73 PRK07108 acetyl-CoA acetyltran  98.9 1.3E-07 3.4E-12   66.3  15.2   98   47-144    23-123 (392)
 74 PRK05790 acetyl-CoA acetyltran  98.9 2.6E-08 6.5E-13   70.7  11.5   99   47-145    22-122 (393)
 75 PRK07937 lipid-transfer protei  98.9 1.7E-07 4.4E-12   65.5  15.5   87   50-141    23-113 (352)
 76 PRK06501 3-oxoacyl-(acyl carri  98.9 7.5E-07 1.9E-11   61.6  18.2  179   87-288   153-364 (425)
 77 PRK07851 acetyl-CoA acetyltran  98.9 7.8E-08   2E-12   67.7  13.1   97   47-144    23-123 (405)
 78 PRK07103 polyketide beta-ketoa  98.9 1.5E-07 3.9E-12   65.9  14.5  261    1-290     6-359 (415)
 79 PRK09116 3-oxoacyl-(acyl carri  98.9 3.4E-07 8.6E-12   63.7  16.1  209   51-287     4-277 (336)
 80 PRK06147 3-oxoacyl-(acyl carri  98.9 1.1E-06 2.9E-11   60.5  18.5  241   52-316    65-338 (346)
 81 cd00828 elong_cond_enzymes "el  98.9 2.6E-07 6.6E-12   64.5  15.2  216   53-291    74-352 (407)
 82 PRK08722 3-oxoacyl-(acyl carri  98.9 2.6E-07 6.6E-12   64.5  15.1  261    3-288     6-354 (414)
 83 PRK09185 3-oxoacyl-(acyl carri  98.9 6.1E-07 1.5E-11   62.2  16.6  143   87-246   138-301 (395)
 84 PRK07910 3-oxoacyl-(acyl carri  98.9 4.1E-07   1E-11   63.3  15.5  210   53-288    85-359 (418)
 85 PRK08768 consensus              98.8   6E-07 1.5E-11   62.2  16.2  266    1-290     1-354 (411)
 86 PRK09052 acetyl-CoA acetyltran  98.8 5.5E-06 1.4E-10   56.2  20.8   99   47-145    27-129 (399)
 87 PRK06845 consensus              98.8 7.6E-08 1.9E-12   67.8  11.1   98   47-144    22-122 (392)
 88 cd00832 CLF Chain-length facto  98.8 9.2E-07 2.3E-11   61.1  16.3  211   51-290    71-345 (399)
 89 PRK07967 3-oxoacyl-(acyl carri  98.8 3.3E-06 8.5E-11   57.6  18.6  255    1-287     1-343 (406)
 90 cd00833 PKS polyketide synthas  98.8 1.1E-06 2.8E-11   60.5  15.8  218   53-290    89-359 (421)
 91 PRK06205 acetyl-CoA acetyltran  98.8 3.9E-07   1E-11   63.3  13.3   99   47-145    22-122 (404)
 92 PRK07025 consensus              98.8 1.7E-07 4.3E-12   65.6  11.4   99   47-145    22-122 (393)
 93 pfam00108 Thiolase_N Thiolase,  98.7 2.1E-07 5.3E-12   65.1  11.2   99   47-145    22-122 (264)
 94 PRK07491 consensus              98.7 2.3E-07 5.8E-12   64.8  11.1   99   47-145    23-123 (392)
 95 PRK06366 acetyl-CoA acetyltran  98.7 3.1E-07 7.8E-12   64.0  11.4   99   47-145    22-122 (388)
 96 PRK08170 acetyl-CoA acetyltran  98.7 3.3E-07 8.4E-12   63.8  11.4   99   47-145    23-123 (426)
 97 PRK08963 fadI 3-ketoacyl-CoA t  98.7 4.4E-07 1.1E-11   63.0  11.5  100   46-145    32-133 (436)
 98 PRK08439 3-oxoacyl-(acyl carri  98.7 5.9E-06 1.5E-10   56.0  17.2  258    1-290     1-348 (405)
 99 TIGR02845 spore_V_AD stage V s  98.7 1.1E-06 2.9E-11   60.5  13.4  179   48-250    42-246 (331)
100 PRK09268 acetyl-CoA acetyltran  98.7 6.5E-07 1.7E-11   62.0  11.5   99   47-145    27-127 (428)
101 PRK08131 acetyl-CoA acetyltran  98.6 7.3E-07 1.9E-11   61.7  11.3   99   47-145    22-123 (401)
102 PRK06689 consensus              98.6 1.3E-06 3.2E-11   60.2  11.3   99   47-145    22-122 (391)
103 PRK07850 acetyl-CoA acetyltran  98.5 2.3E-06 5.8E-11   58.6  11.4   99   47-145    22-123 (387)
104 TIGR01930 AcCoA-C-Actrans acet  98.5 1.4E-06 3.6E-11   59.9  10.2   99   47-145    20-122 (447)
105 PRK09050 beta-ketoadipyl CoA t  98.5 2.4E-06 6.2E-11   58.4  11.3   99   47-145    22-124 (401)
106 PRK08234 consensus              98.5 2.6E-06 6.5E-11   58.3  11.3   99   47-145    22-124 (400)
107 PRK06690 acetyl-CoA acetyltran  98.5 2.3E-05 5.9E-10   52.4  15.8   96   47-145    21-116 (361)
108 PRK13359 beta-ketoadipyl CoA t  98.4 5.4E-06 1.4E-10   56.3  11.1   99   47-145    22-124 (400)
109 PRK07661 acetyl-CoA acetyltran  98.3 1.7E-05 4.3E-10   53.2  10.4   99   47-145    17-117 (384)
110 COG0304 FabB 3-oxoacyl-(acyl-c  98.2 0.00012   3E-09   47.9  14.1  179   50-245    70-314 (412)
111 PRK08304 stage V sporulation p  98.1 0.00039 9.9E-09   44.7  14.1  237   51-313    56-315 (336)
112 pfam07451 SpoVAD Stage V sporu  98.0 0.00075 1.9E-08   43.0  15.2  236   51-312    51-309 (329)
113 KOG1390 consensus               97.9 0.00079   2E-08   42.8  13.7   98   48-145    27-126 (396)
114 pfam00109 ketoacyl-synt Beta-k  97.9 0.00013 3.3E-09   47.7   9.5   87   53-141    78-194 (243)
115 PRK12404 stage V sporulation p  97.9   0.002 5.2E-08   40.2  15.9  235   51-312    54-312 (334)
116 COG0183 PaaJ Acetyl-CoA acetyl  97.7 0.00049 1.2E-08   44.1   9.5   96   51-146    27-127 (392)
117 COG3321 Polyketide synthase mo  97.7  0.0031 7.9E-08   39.1  13.0  172   54-243    94-319 (1061)
118 KOG1394 consensus               97.3  0.0039 9.9E-08   38.5   9.9  178   51-245    94-339 (440)
119 KOG1389 consensus               97.2   0.014 3.5E-07   35.1  11.8   92   51-143    61-155 (435)
120 PRK08257 acetyl-CoA acetyltran  97.0   0.015   4E-07   34.8  10.6  106   34-141    10-120 (502)
121 PRK06519 3-oxoacyl-(acyl carri  96.9   0.034 8.8E-07   32.6  15.1  160   52-237    74-309 (397)
122 KOG1406 consensus               96.5  0.0086 2.2E-07   36.4   6.3   91   48-142    26-118 (408)
123 KOG1202 consensus               95.7   0.051 1.3E-06   31.6   6.7  179   51-241    87-310 (2376)
124 KOG1391 consensus               94.9   0.083 2.1E-06   30.2   5.8   94   49-145    26-125 (396)
125 KOG1392 consensus               92.9    0.17 4.3E-06   28.3   4.3   91   49-140    64-157 (465)
126 pfam02803 Thiolase_C Thiolase,  91.4       1 2.6E-05   23.5   6.7   87  206-308    21-110 (123)
127 pfam02801 Ketoacyl-synt_C Beta  91.0    0.59 1.5E-05   24.9   5.2   79  207-291    25-103 (117)
128 TIGR02430 pcaF beta-ketoadipyl  75.3     5.7 0.00014   18.8   5.1   90   53-142    27-120 (400)
129 pfam01135 PCMT Protein-L-isoas  66.9     8.1 0.00021   17.9   3.7   42  274-316    50-91  (205)
130 PRK00312 pcm protein-L-isoaspa  64.7     8.8 0.00022   17.6   3.5   38  275-313    56-93  (213)
131 PRK13944 protein-L-isoaspartat  64.2     9.6 0.00024   17.4   3.6   39  274-313    49-87  (205)
132 PRK13942 protein-L-isoaspartat  63.3      10 0.00026   17.2   4.8   39  275-314    54-92  (214)
133 COG3894 Uncharacterized metal-  63.1     9.4 0.00024   17.5   3.4   70  206-288   473-542 (614)
134 TIGR02446 FadI acetyl-CoA C-ac  62.9      10 0.00027   17.2   4.0   95   49-143    29-125 (430)
135 PRK13980 NAD synthetase; Provi  61.9      11 0.00027   17.2   3.5  119   35-161    24-158 (264)
136 TIGR00454 TIGR00454 conserved   57.9      13 0.00032   16.6   5.1   93   43-142    13-110 (204)
137 TIGR02823 oxido_YhdH putative   55.5     8.7 0.00022   17.7   2.2  207  130-353    42-302 (330)
138 cd01451 vWA_Magnesium_chelatas  54.9      14 0.00036   16.3   5.5   87   49-140    16-108 (178)
139 PRK11706 TDP-4-oxo-6-deoxy-D-g  52.2      12 0.00031   16.8   2.5   63   33-109    40-102 (375)
140 KOG2915 consensus               49.7     4.4 0.00011   19.5  -0.1   21   87-107   118-138 (314)
141 PRK13943 protein-L-isoaspartat  49.5      17 0.00044   15.8   3.6   34   85-119    60-93  (317)
142 KOG4342 consensus               47.3      19 0.00048   15.6   3.9   38  275-312   457-496 (1078)
143 TIGR01265 tyr_nico_aTase tyros  46.1      15 0.00038   16.2   2.1  121   17-146    19-164 (424)
144 TIGR03588 PseC UDP-4-keto-6-de  45.7      19 0.00048   15.6   2.6   62   33-108    38-99  (380)
145 PRK08507 prephenate dehydrogen  44.9      20 0.00052   15.4   3.1   38   68-110    56-93  (275)
146 TIGR02813 omega_3_PfaA polyket  43.9      21 0.00054   15.3   5.7  127    8-141    78-240 (2773)
147 TIGR00263 trpB tryptophan synt  42.7      22 0.00056   15.2   4.9  141    9-165    11-164 (412)
148 PRK11658 UDP-4-amino-4-deoxy-L  42.4      21 0.00055   15.2   2.5   62   33-108    42-103 (379)
149 PRK07591 threonine synthase; V  40.5      24 0.00061   15.0   3.8   36  276-312   358-393 (422)
150 TIGR03285 methan_mark_14 putat  40.2      24 0.00062   14.9   4.1   33   47-79     61-95  (445)
151 TIGR00108 eRF peptide chain re  39.9      22 0.00056   15.2   2.2   75   68-147    29-104 (425)
152 COG3897 Predicted methyltransf  38.4      25 0.00064   14.8   2.3   10  213-222   164-173 (218)
153 COG0533 QRI7 Metal-dependent p  38.3      26 0.00066   14.7   4.1   79   55-139    54-136 (342)
154 PRK05638 threonine synthase; V  37.8      26 0.00067   14.7   3.8   37  275-312   322-358 (443)
155 pfam01041 DegT_DnrJ_EryC1 DegT  35.2      29 0.00074   14.4   2.5   62   33-108    34-95  (363)
156 pfam05834 Lycopene_cycl Lycope  34.9      29 0.00075   14.4   3.0   20  207-226   213-232 (374)
157 PRK07417 arogenate dehydrogena  33.1      31  0.0008   14.2   3.1   90    1-112     2-96  (280)
158 PRK02478 Maf-like protein; Rev  32.6      32 0.00081   14.2   3.1   27   74-106     5-31  (199)
159 PRK03359 putative electron tra  32.3      32 0.00083   14.1   4.9   25   53-77     39-63  (256)
160 PRK08197 threonine synthase; V  31.7      33 0.00084   14.1   3.7   35  277-312   347-381 (402)
161 TIGR00080 pimt protein-L-isoas  30.7      34 0.00088   14.0   3.3   47  270-316    53-100 (228)
162 PRK04425 Maf-like protein; Rev  30.7      24 0.00061   14.9   1.2   63   74-142     7-75  (196)
163 pfam02666 PS_Dcarbxylase Phosp  29.9      33 0.00083   14.1   1.8   25  292-317   154-178 (201)
164 COG2230 Cfa Cyclopropane fatty  29.5      26 0.00067   14.7   1.2   30   92-123    64-93  (283)
165 TIGR00631 uvrb excinuclease AB  29.2      36 0.00093   13.8   2.8   79  268-355   305-390 (667)
166 pfam00814 Peptidase_M22 Glycop  29.0      37 0.00094   13.8   4.0   52   56-109    33-88  (225)
167 cd00616 AHBA_syn 3-amino-5-hyd  28.9      37 0.00094   13.8   2.5   64   32-109    26-89  (352)
168 TIGR03419 NifU_clost FeS clust  28.1      38 0.00097   13.7   2.1   16  206-221   106-121 (121)
169 TIGR01752 flav_long flavodoxin  27.8      39 0.00098   13.7   2.7   36   73-110     3-38  (176)
170 PRK08317 hypothetical protein;  26.4      41   0.001   13.5   6.1  204   88-356     7-219 (241)
171 TIGR01225 hutH histidine ammon  25.9      42  0.0011   13.4   1.8   14   74-87     49-62  (529)
172 KOG2112 consensus               25.9      42  0.0011   13.4   2.3   86  222-319    26-112 (206)
173 PRK08361 aspartate aminotransf  25.8      42  0.0011   13.4   6.1   90   38-137    33-123 (390)
174 TIGR03496 FliI_clade1 flagella  25.5      42  0.0011   13.4   3.3   36  277-321   258-293 (411)
175 COG2518 Pcm Protein-L-isoaspar  25.3      43  0.0011   13.4   2.8   20  294-313    68-87  (209)
176 PRK06260 threonine synthase; V  25.2      43  0.0011   13.4   3.7   43  269-312   327-372 (400)
177 cd01467 vWA_BatA_type VWA BatA  25.0      43  0.0011   13.3   5.7   86   49-139    23-111 (180)
178 pfam08704 GCD14 tRNA methyltra  25.0      16 0.00042   16.0  -0.5   38   85-122    87-124 (309)
179 COG0133 TrpB Tryptophan syntha  24.8      44  0.0011   13.3   5.3  141    9-164    14-163 (396)
180 pfam04298 Zn_peptidase_2 Putat  24.5      44  0.0011   13.3   2.3   18  334-351   173-190 (222)
181 pfam02353 CMAS Cyclopropane-fa  24.0      45  0.0012   13.2   2.4   91   18-116     6-102 (273)
182 TIGR02288 PaaN_2 phenylacetic   23.3      47  0.0012   13.1   3.9   85   51-143   240-327 (560)
183 PRK09585 anmK anhydro-N-acetyl  22.6      48  0.0012   13.1   4.0   56   54-110    72-139 (366)
184 TIGR02707 butyr_kinase butyrat  21.9      50  0.0013   13.0   2.8   28  210-237   158-185 (353)
185 pfam02514 CobN-Mg_chel CobN/Ma  21.7      50  0.0013   12.9   3.6   13   81-93    264-276 (1064)
186 PRK08942 D,D-heptose 1,7-bisph  21.2      51  0.0013   12.9   4.6   49  198-248    60-117 (181)
187 pfam00670 AdoHcyase_NAD S-aden  21.2      52  0.0013   12.9   2.7   21  289-309    13-33  (162)
188 TIGR01246 dapE_proteo succinyl  21.1      52  0.0013   12.9   1.5  201   39-249     9-320 (383)
189 cd05125 Mth938_2P1-like Mth938  21.1      52  0.0013   12.9   3.2   42   70-114    54-96  (114)
190 TIGR02771 TraF_Ti conjugative   20.9      52  0.0013   12.8   2.7   30  276-306    30-60  (183)
191 cd00248 Mth938-like Mth938-lik  20.7      53  0.0013   12.8   4.3   60   49-114    34-94  (109)
192 pfam00012 HSP70 Hsp70 protein.  20.6      53  0.0013   12.8   3.6   37  205-241   304-340 (598)
193 PRK09605 O-sialoglycoprotein e  20.6      53  0.0014   12.8   4.2   78   54-139    52-134 (536)
194 cd06449 ACCD Aminocyclopropane  20.4      53  0.0014   12.8   7.3   34  274-308   273-306 (307)
195 PRK05305 phosphatidylserine de  20.3      54  0.0014   12.8   1.4   22  291-312   163-184 (214)

No 1  
>TIGR01835 HMG-CoA-S_prok hydroxymethylglutaryl-CoA synthase; InterPro: IPR011554   Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase.    Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA .   HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria . In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi . In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes , .   This entry represents HMG-CoA synthase enzymes found in a limited spectrum of mostly Gram-positive bacteria, which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway..
Probab=100.00  E-value=0  Score=741.81  Aligned_cols=383  Identities=50%  Similarity=0.838  Sum_probs=373.2

Q ss_pred             CEEEEEEEECCCEEECHHHHHH-----HCCCCHHHHHHHCC---CCEEEECCCCCCHHHHHHHHHHHHHHHC--CHHHCC
Q ss_conf             2066888734890455999998-----70999879763038---3246655998599999999999999727--957868
Q gi|254781019|r    3 IGIEDISFYTTNQYLDLSVIAE-----KYRLDVAKFYVGIG---QERMSVLNPDEDIVTMAAAAALPIMQNQ--DKNLID   72 (396)
Q Consensus         3 vGI~~i~~y~P~~~v~~~~l~~-----~~g~~~~k~~~~lG---i~~r~v~~~~Ed~~tmA~~Aa~~~L~~~--~~~~Id   72 (396)
                      |||++|++|+|+++|+..+|++     .+|++|+|+.+|+|   |++++|++.+||+||||++|++.+|++.  |.++||
T Consensus         1 IGI~~I~F~~p~~yl~~~~LAEnPLYF~~gv~p~K~~~GIgatLQ~~~~~~~~~eDiVTmAA~Aa~~Il~~~nLd~~~Id   80 (412)
T TIGR01835         1 IGIDKISFFTPQYYLDLTALAENPLYFARGVDPEKFSKGIGATLQKKMAVPPIDEDIVTMAASAAKPILDRNNLDKQKID   80 (412)
T ss_pred             CCCCHHHHHCCCCCCCHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf             97011234403000353566304114541766435757743677765068978864578899999974324206844234


Q ss_pred             EEEEECCCCCCCCHHHHHHHHHHHCCCCCCE-----EEEECCCHHHHHHHHHHHHHHHHCCCC-CEEEEEECCCCCCCCC
Q ss_conf             9999457887546005888863202687735-----898414203588899878999973999-7699950332014588
Q gi|254781019|r   73 TLFFATESSVDQSKSAAIWLHKLLGLNSSCR-----VVELKQACYSATCALHMACALVAKSPE-RKVLIVASDVARYDLG  146 (396)
Q Consensus        73 ~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~-----~~Di~~aC~g~~~AL~~A~~~i~sg~~-~~aLVV~sD~~~~~~~  146 (396)
                      +||+||||++|.+|+.|++||++||+.|.||     +|++++||||+|+||++|..+|+.+|. +++|||+||+++|...
T Consensus        81 ~Vi~gTESgID~SKAaavyvh~LLgl~p~cRGnnFL~~ElK~ACYGATAaLq~A~~hv~~~P~s~kVLViaSDiAkY~~~  160 (412)
T TIGR01835        81 MVIFGTESGIDQSKAAAVYVHGLLGLQPFCRGNNFLSFELKQACYGATAALQMAKGHVARSPNSRKVLVIASDIAKYGLE  160 (412)
T ss_pred             EEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCC
T ss_conf             78975105266899999999998277843104542243277777999999999999985188866016888631122779


Q ss_pred             CCCCCCCCCCEEEEEECCCCCCCEEEECCC-CCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHH
Q ss_conf             875334783024688426876303531000-1567865112758875423566016989999999999999996298821
Q gi|254781019|r  147 SSGEPTQGCGAVAILISSQTSILEIEDITG-IYTNDCMDFWRPNYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHDFN  225 (396)
Q Consensus       147 ~~~~~t~GaGA~Allv~~~~~~~~~~~~~~-~~~~~~~df~rp~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~~  225 (396)
                      +++|+|||||||||||+.||+++.+...++ .+|.|++|||||+++.+|.|||++|.++|+.++.++|++|.++.+++++
T Consensus       161 t~GE~TQGAGAVA~Li~~dP~~l~i~~~~~G~~T~DimDFWRP~y~~~a~VdG~~S~~~Yl~a~~~aW~dy~~~~~~~l~  240 (412)
T TIGR01835       161 TPGEATQGAGAVAMLISADPKLLAINEDSVGLYTDDIMDFWRPNYSTTALVDGQYSTEQYLNALEEAWNDYKERTGLSLE  240 (412)
T ss_pred             CCCCCCHHHHHHHHHHHCCCHHHHCCCCCCCEECCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHCCCCHH
T ss_conf             89886166899999874180120015876531213312121789885531646046889999999999999972389756


Q ss_pred             HCCE---EEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH------HCCCCCCCHHHHHHHHHHHHCC--
Q ss_conf             1012---3311454057888886411024544100134555433344453------2385432338999999997157--
Q gi|254781019|r  226 DFQY---FCYHQPFTRMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNR------LIGNSYTASLYIALISLLDHSS--  294 (396)
Q Consensus       226 did~---~v~H~p~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~------~~GN~~SASi~l~L~slLe~~~--  294 (396)
                      ||++   ||||+||+||+.|++..++.....+..+..++..+..++.|++      +|||+|||||||+|+++||++.  
T Consensus       241 DfaanYR~~fH~PftKMg~Ka~~~~l~~~~~~~~k~~~~~~y~~Si~Y~~Gveaam~vGN~YTGSlyLgL~sLLena~sk  320 (412)
T TIGR01835       241 DFAANYRFCFHVPFTKMGLKALRHILKKNKEDEDKDSVQKAYEESILYNRGVEAAMEVGNLYTGSLYLGLASLLENAQSK  320 (412)
T ss_pred             HHHCCCCEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCC
T ss_conf             75315717870787420379999987404781268999998753367852344333305413788999999986303664


Q ss_pred             CCCCCCEEEEEEECCCCCEEEEEEEEECCHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHCCCCCC-CCCCCCCCCCCCE
Q ss_conf             436988899984079830377877860226876520387889742722389999999863068888-7631666788866
Q gi|254781019|r  295 ENLAGKRVGFFSYGSGCVAEFFSGIVQKNYRKKSHQKRHQHIINSRIPISYQVYCDLHQDIIPSVE-GNCTIPHTTTGPF  373 (396)
Q Consensus       295 ~~~~G~rIll~syGsG~~a~~f~~~v~~~~~~~~~~~~~~~~L~~r~~l~~~~y~~~~~~~~~~~~-~~~~~~~~~~~~~  373 (396)
                      +++.|++|+|||||||+++|||+++|++++++++..+++++.|++|+.+++++|+++|+...+..+ .+...+.+.+|.|
T Consensus       321 ~d~tG~~Igl~SYGSGavaEFF~g~l~~Gy~~~L~~~~~~~~l~~R~~~~~~eY~~~F~~~~~~dg~~~~~~~~~~~~~f  400 (412)
T TIGR01835       321 EDLTGDKIGLFSYGSGAVAEFFSGTLVEGYEDHLKKERHLELLKNRTEVSVAEYEKLFEETIPTDGSDSADATGEDRGEF  400 (412)
T ss_pred             CCCCCCEEEEEECCCCCEEEEEEEEECHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHH
T ss_conf             43131111100125220110010044045898878999999987177468899999986206898875001566220255


Q ss_pred             EEEEEECCEEEE
Q ss_conf             983565538998
Q gi|254781019|r  374 RLATIQNHKRIY  385 (396)
Q Consensus       374 ~l~~i~~~~R~Y  385 (396)
                      .|.+|.||+|.|
T Consensus       401 ~l~~I~d~~R~Y  412 (412)
T TIGR01835       401 RLAGINDHKRIY  412 (412)
T ss_pred             HHHHHCCCCCCC
T ss_conf             554440676779


No 2  
>TIGR01833 HMG-CoA-S_euk hydroxymethylglutaryl-CoA synthase; InterPro: IPR010122   Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase.    Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA .   HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria . In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi . In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes , .   This entry is specific for eukaryotic HMG-CoA synthase enzymes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process.
Probab=100.00  E-value=0  Score=676.57  Aligned_cols=386  Identities=30%  Similarity=0.489  Sum_probs=355.5

Q ss_pred             CCEEEEEEEECCCEEECHHHHHHHCCCCHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHC--CHHHCCEEEEECC
Q ss_conf             62066888734890455999998709998797630383246655998599999999999999727--9578689999457
Q gi|254781019|r    2 AIGIEDISFYTTNQYLDLSVIAEKYRLDVAKFYVGIGQERMSVLNPDEDIVTMAAAAALPIMQNQ--DKNLIDTLFFATE   79 (396)
Q Consensus         2 ~vGI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~~lGi~~r~v~~~~Ed~~tmA~~Aa~~~L~~~--~~~~Id~li~~T~   79 (396)
                      +|||.+|..|+|..||++.+||.+.|++.|||+.||||.+|+||.+.||+.+|+++|+.+||+++  ++++|++|.||||
T Consensus         4 dVGI~al~~yfP~~yV~Q~~LE~yDgVs~GKYTiGLGq~~mgFc~drEDI~Sl~LTvv~~L~er~~id~~~IGRLEVGTE   83 (461)
T TIGR01833         4 DVGILALEIYFPSQYVDQAELEKYDGVSAGKYTIGLGQTKMGFCTDREDINSLCLTVVSKLMERYQIDYNKIGRLEVGTE   83 (461)
T ss_pred             CCEEEEEEEECCCCCCCHHHHHHHCCCCCCCEEECCCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCE
T ss_conf             74068888636887526577863268888950342356620000221015666589999999860787154311010425


Q ss_pred             CCCCCCHHHHHHHHHHHCC--CCCCEEEEECCCHHHHHHHHHHHHHHHHCCC--CCEEEEEECCCCCCCCCCCCCCCCCC
Q ss_conf             8875460058888632026--8773589841420358889987899997399--97699950332014588875334783
Q gi|254781019|r   80 SSVDQSKSAAIWLHKLLGL--NSSCRVVELKQACYSATCALHMACALVAKSP--ERKVLIVASDVARYDLGSSGEPTQGC  155 (396)
Q Consensus        80 t~~~~~~~~a~~v~~~Lgl--~~~~~~~Di~~aC~g~~~AL~~A~~~i~sg~--~~~aLVV~sD~~~~~~~~~~~~t~Ga  155 (396)
                      |-+|.+||+.++|||+++-  +++++++|..+||||||+||.+|.+||+|+.  +|.+||||+||+.|..+ .+|||+||
T Consensus        84 TiiDKSKSVKtVLMQLF~~sGNTDvEGiDt~NACYGGTaALFNa~~WiESssWDGRyalVVagDiAvYa~G-~ARPTGGA  162 (461)
T TIGR01833        84 TIIDKSKSVKTVLMQLFEESGNTDVEGIDTVNACYGGTAALFNAINWIESSSWDGRYALVVAGDIAVYAKG-NARPTGGA  162 (461)
T ss_pred             EEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCC-CCCCCHHH
T ss_conf             34100103557767754205795435325534112247999754543212675303412453211134888-98875289


Q ss_pred             CEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCC-CCCCEEECCHHHHHHHHHHHHHHHHHHHHH------------CCC
Q ss_conf             0246884268763035310001567865112758-875423566016989999999999999996------------298
Q gi|254781019|r  156 GAVAILISSQTSILEIEDITGIYTNDCMDFWRPN-YRRTALVDGKYSTKIYLQSLEAVWHDYQKN------------KGH  222 (396)
Q Consensus       156 GA~Allv~~~~~~~~~~~~~~~~~~~~~df~rp~-~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~------------~g~  222 (396)
                      ||+|||||++++++...+.+++||.|.+|||||+ .++||+|||++|.+||+.++..|++.|..|            ...
T Consensus       163 GavAmLiGp~APivfe~glR~shM~HaYDFYKPdL~SEYP~VDGklS~~CYl~ALD~cY~~y~~K~~~~~~~~~~~~~~f  242 (461)
T TIGR01833       163 GAVAMLIGPNAPIVFERGLRASHMQHAYDFYKPDLASEYPVVDGKLSIQCYLSALDRCYKSYCKKIEKQLGKSGKDGRKF  242 (461)
T ss_pred             HHHHHHHCCCCCEEECCCCCHHHHCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf             99999756898887427754122214533368888316850445305878998988888998888998742024467633


Q ss_pred             CHHHCCEEEECCCCCHHHHHHHHHHCCH-------------------------------------HHHHHHHHHHHHHHH
Q ss_conf             8211012331145405788888641102-------------------------------------454410013455543
Q gi|254781019|r  223 DFNDFQYFCYHQPFTRMAEKAHIRLSKI-------------------------------------VHQNLSVAEIEKAIG  265 (396)
Q Consensus       223 ~~~did~~v~H~p~~k~~~~~~~~l~~~-------------------------------------~~~~~~~~~~e~~~~  265 (396)
                      +++++|++|||.|++|+++|...||+-.                                     .........|++++.
T Consensus       243 ~l~~~dy~vFH~PyCKlVqKS~ARLlyNDF~~~~~~~~~~~~~~~~~~l~~l~~~~ty~drd~EK~~~~~sk~~f~~k~~  322 (461)
T TIGR01833       243 TLDDFDYMVFHSPYCKLVQKSLARLLYNDFLANPSSETDTALYEVLEALSTLKLEDTYTDRDLEKAFMKISKELFDKKVK  322 (461)
T ss_pred             CHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHCC
T ss_conf             06344736750773226899999998888763223445566666677653377112002325889999999998861020


Q ss_pred             HHHHHHHHCCCCCCCHHHHHHHHHHHHCCC-CCCCCEEEEEEECCCCCEEEEEEEEECC-------HHHHHHCCCHHHHH
Q ss_conf             334445323854323389999999971574-3698889998407983037787786022-------68765203878897
Q gi|254781019|r  266 ITTLYNRLIGNSYTASLYIALISLLDHSSE-NLAGKRVGFFSYGSGCVAEFFSGIVQKN-------YRKKSHQKRHQHII  337 (396)
Q Consensus       266 ~~~~~~~~~GN~~SASi~l~L~slLe~~~~-~~~G~rIll~syGsG~~a~~f~~~v~~~-------~~~~~~~~~~~~~L  337 (396)
                      |++.++.++|||||||+|-+|+|||.+... .+.|+||++||||||++|+|||++|..+       .+.+....++..+|
T Consensus       323 ~Sl~~~~~~GNMYT~SlYg~laSLL~~~~~~eLaGkRv~~FSYGSGlAAs~FS~~~~~D~~p~S~l~~~~~~~~d~~~~L  402 (461)
T TIGR01833       323 PSLLLPTQVGNMYTASLYGCLASLLSSKSADELAGKRVGLFSYGSGLAASLFSLRVSGDASPGSILDKLIASLSDIKNKL  402 (461)
T ss_pred             CEEEECCCCCCCCHHHHHHHHHHHHHCCCHHHHCCCEEEEEECCHHHHHHHEEEEECCCCCCCCHHHHHHHHHHCCHHHH
T ss_conf             00210005786400789999999974078013077569986362455432110145368887641455566552115777


Q ss_pred             HCCCCCCHHHHHHHHH-----HCCCCCCC--CCCCCCCCCCCEEEEEEEC-CEEEEEEE
Q ss_conf             4272238999999986-----30688887--6316667888669835655-38998861
Q gi|254781019|r  338 NSRIPISYQVYCDLHQ-----DIIPSVEG--NCTIPHTTTGPFRLATIQN-HKRIYETT  388 (396)
Q Consensus       338 ~~r~~l~~~~y~~~~~-----~~~~~~~~--~~~~~~~~~~~~~l~~i~~-~~R~Y~~~  388 (396)
                      ++|+.++|++|++.++     +...+|.|  .++++...+|+|||++||+ |||.|+++
T Consensus       403 ~~R~~~~P~~f~~~m~~Re~~h~k~nf~P~k~gsi~~L~~GTyYL~~vD~~~RR~Y~~~  461 (461)
T TIGR01833       403 DSRHCLSPEEFEEAMELREQAHHKKNFTPTKEGSIESLFPGTYYLESVDSLHRRSYKRK  461 (461)
T ss_pred             HHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCHHHCCCCCCC
T ss_conf             53321480889999999987303578854767770437896032021123236345789


No 3  
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=100.00  E-value=0  Score=656.46  Aligned_cols=375  Identities=33%  Similarity=0.479  Sum_probs=354.8

Q ss_pred             CCCEEEEEEEECCCEEECHHHHHHHCCCCHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHH--CCHHHCCEEEEEC
Q ss_conf             96206688873489045599999870999879763038324665599859999999999999972--7957868999945
Q gi|254781019|r    1 MAIGIEDISFYTTNQYLDLSVIAEKYRLDVAKFYVGIGQERMSVLNPDEDIVTMAAAAALPIMQN--QDKNLIDTLFFAT   78 (396)
Q Consensus         1 M~vGI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~~lGi~~r~v~~~~Ed~~tmA~~Aa~~~L~~--~~~~~Id~li~~T   78 (396)
                      |+|||.+|++|+|+++|+++||++.||++++|+.+++|+.+|+|++++||++|||++|++++|++  .||++|++|+++|
T Consensus         1 ~~iGI~~~g~y~p~~~i~~~ela~~~g~d~~k~~~gl~~~e~sv~~~~ED~vTmaveAA~~~l~r~~~D~~~Ig~v~vgT   80 (377)
T COG3425           1 MMIGIVGIGAYIPRYRIKLEELARAWGVDPEKIKKGLGVEEKSVPPWDEDAVTMAVEAARNALKRADIDPSKIGAVIVGS   80 (377)
T ss_pred             CCCCCCEEEEECCCEEEEHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCEEEEEC
T ss_conf             95551238885662386099997632888377653004234467997420899999999998751388988966699953


Q ss_pred             CCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEE
Q ss_conf             78875460058888632026877358984142035888998789999739997699950332014588875334783024
Q gi|254781019|r   79 ESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACALVAKSPERKVLIVASDVARYDLGSSGEPTQGCGAV  158 (396)
Q Consensus        79 ~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~~~~~~~~t~GaGA~  158 (396)
                      ||++|.+|++|++||++||++++++++|+++||+++|+||++|.+||.+++++++|||++|++.|.+++..|+|+||||+
T Consensus        81 ES~~d~~K~~at~v~~~lg~~~~~~~~d~~~AC~agT~aL~~a~~~v~s~~~~~~LvI~sD~a~~~~~~~~E~t~GAGav  160 (377)
T COG3425          81 ESGPDAVKPTATIVAEALGLNPSARAADVEFACYAGTAALQAAIGWVESGMISYGLVIGADTAQYAPGDALEYTAGAGAV  160 (377)
T ss_pred             CCCCCCCCCHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHCCCCCCCCCCCCCCCEE
T ss_conf             77765444058999998389975120567878998899999999999728755417996311035888656766778608


Q ss_pred             EEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCCH
Q ss_conf             68842687630353100015678651127588754235660169899999999999999962988211012331145405
Q gi|254781019|r  159 AILISSQTSILEIEDITGIYTNDCMDFWRPNYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHDFNDFQYFCYHQPFTR  238 (396)
Q Consensus       159 Allv~~~~~~~~~~~~~~~~~~~~~df~rp~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~~did~~v~H~p~~k  238 (396)
                      ||++++++.++++...+++++.|++|||||.+.+||.+||+++..+|++++.++++.++++.|++++||||+||||||+|
T Consensus       161 A~lIg~n~~~~a~~~~~~syt~d~~DFwRp~~~~yp~~dg~~s~~~Y~~~~~~a~~~~~~k~gls~~dfdy~vfH~P~~k  240 (377)
T COG3425         161 AFLIGKNPPIVAEFEGTGSYTTDTPDFWRPDGQPYPYVDGRFSEPAYFKHVENAAKGYMEKTGLSPDDFDYIVFHQPNGK  240 (377)
T ss_pred             EEEEECCCCEEEEECCCEEEECCCCCCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHCCCHHHHCEEEECCCCCC
T ss_conf             99980698727872475677457776146689846640763558999999999999999983898455075983179872


Q ss_pred             HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEEEE
Q ss_conf             78888864110245441001345554333444532385432338999999997157436988899984079830377877
Q gi|254781019|r  239 MAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALISLLDHSSENLAGKRVGFFSYGSGCVAEFFSG  318 (396)
Q Consensus       239 ~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~slLe~~~~~~~G~rIll~syGsG~~a~~f~~  318 (396)
                      |+++++..++..          ++++.+++.+++++||+||||+|++|+++|++++  ++|||||++|||||+++++||+
T Consensus       241 ~~~ka~k~l~~~----------~e~v~~~l~~~~~vGN~YtgS~~L~Las~Ld~a~--~~G~rIl~~SYGSGa~s~~fs~  308 (377)
T COG3425         241 FPKKAAKSLGFK----------EEQVKPGLVYPQRIGNTYTGSLLLGLASLLDNAK--LPGDRILLFSYGSGAGSEAFSI  308 (377)
T ss_pred             HHHHHHHHHCCC----------HHHCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCC--CCCCEEEEEEECCCCCEEEEEE
T ss_conf             489999985734----------7662843011665275111069999999985267--8888799996078852567888


Q ss_pred             EEECCHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCEEEEEEE
Q ss_conf             8602268765203878897427223899999998630688887631666788866983565538998861
Q gi|254781019|r  319 IVQKNYRKKSHQKRHQHIINSRIPISYQVYCDLHQDIIPSVEGNCTIPHTTTGPFRLATIQNHKRIYETT  388 (396)
Q Consensus       319 ~v~~~~~~~~~~~~~~~~L~~r~~l~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~R~Y~~~  388 (396)
                      +|++++.++.+...+..+|++|+.+|+.+|+.+++.+.+......... ...+.|+|+.|+++.|+|.+.
T Consensus       309 ~v~~~~~~~~~~~~~~~~l~~R~~ls~~dYe~~~~~~~~~~~~~~~~~-~~~~~~~l~~i~~~~R~y~~~  377 (377)
T COG3425         309 TVTDGIEERRKKLAPTVLLEQRNRLSYIDYELYFKRRKKIRLGKDNEF-YDSGDYYLEEIDDHFRRYRYV  377 (377)
T ss_pred             EECCCHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCC-CCCCCEEEEECCCCCEEEEEC
T ss_conf             961608877650154778876503899999999851343333334455-567746976216772567509


No 4  
>KOG1393 consensus
Probab=100.00  E-value=0  Score=569.93  Aligned_cols=391  Identities=29%  Similarity=0.470  Sum_probs=355.1

Q ss_pred             CCEEEEEEEECCCEEECHHHHHHHCCCCHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHC--CHHHCCEEEEECC
Q ss_conf             62066888734890455999998709998797630383246655998599999999999999727--9578689999457
Q gi|254781019|r    2 AIGIEDISFYTTNQYLDLSVIAEKYRLDVAKFYVGIGQERMSVLNPDEDIVTMAAAAALPIMQNQ--DKNLIDTLFFATE   79 (396)
Q Consensus         2 ~vGI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~~lGi~~r~v~~~~Ed~~tmA~~Aa~~~L~~~--~~~~Id~li~~T~   79 (396)
                      +|||.+|..|+|..+|++.||+...|.+.+|++.||||.+|.||.+.||+.+|+.++++++|++.  +++.|++|.|+||
T Consensus        11 dvGI~aieiyfP~~yV~Q~elEk~d~vs~gKytIGLGq~~MgfcsdrEDi~Sl~ltvvs~Lmery~i~~~~IGRLEVGTE   90 (462)
T KOG1393          11 DVGIIAIEIYFPSQYVDQEELEKFDGVSAGKYTIGLGQTQMGFCSDREDIISLSLTVVSRLMERYNIDPDSIGRLEVGTE   90 (462)
T ss_pred             CCCEEEEEEECCCCCCCHHHHHHCCCCCCCCEEECCCCCEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCEEEECCE
T ss_conf             35426899976756667666762488544625763475121253763320035599999999983898656411773230


Q ss_pred             CCCCCCHHHHHHHHHHHC--CCCCCEEEEECCCHHHHHHHHHHHHHHHHCC--CCCEEEEEECCCCCCCCCCCCCCCCCC
Q ss_conf             887546005888863202--6877358984142035888998789999739--997699950332014588875334783
Q gi|254781019|r   80 SSVDQSKSAAIWLHKLLG--LNSSCRVVELKQACYSATCALHMACALVAKS--PERKVLIVASDVARYDLGSSGEPTQGC  155 (396)
Q Consensus        80 t~~~~~~~~a~~v~~~Lg--l~~~~~~~Di~~aC~g~~~AL~~A~~~i~sg--~~~~aLVV~sD~~~~~~~~~~~~t~Ga  155 (396)
                      |-+|.+||+.+.++++++  .+.++.+.|..+|||||++||.+|.+||+++  .++.+||||+|++.|..+ +.|||+||
T Consensus        91 TiiDKSKSVKt~LMqLF~~sgNtdIEGiDttnACYGGtaALfnavnWiESssWDGr~aivV~gDIAvY~~G-~aRpTGGA  169 (462)
T KOG1393          91 TIIDKSKSVKTVLMQLFEESGNTDIEGIDTTNACYGGTAALFNAVNWIESSSWDGRYAIVVCGDIAVYAKG-NARPTGGA  169 (462)
T ss_pred             ECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCC-CCCCCCCC
T ss_conf             02453257999999971013897543443443012338999877655211445774148997337871478-87777873


Q ss_pred             CEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCC-CCCCEEECCHHHHHHHHHHHHHHHHHHHHHC--------CCCHHH
Q ss_conf             0246884268763035310001567865112758-8754235660169899999999999999962--------988211
Q gi|254781019|r  156 GAVAILISSQTSILEIEDITGIYTNDCMDFWRPN-YRRTALVDGKYSTKIYLQSLEAVWHDYQKNK--------GHDFND  226 (396)
Q Consensus       156 GA~Allv~~~~~~~~~~~~~~~~~~~~~df~rp~-~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~--------g~~~~d  226 (396)
                      ||+|||++|++++......+++|+.+.+|||+|+ .++||+|||++|.+||+.++..|+..+.+|.        +..+++
T Consensus       170 gAVAmLIgPnApi~ferglr~thM~hayDFyKPdl~SEyPvVDGklSi~cYl~Ald~cY~~~~kK~~~~~~~~~~~~l~~  249 (462)
T KOG1393         170 GAVAMLIGPNAPIIFERGLRATHMQHAYDFYKPDLLSEYPVVDGKLSIQCYLSALDRCYTVYRKKIAAQWQKSGSDNLNS  249 (462)
T ss_pred             CEEEEEECCCCCEEECCCCHHHHHHHHHHCCCCCCCCCCCEECCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf             35899976998557445303446565430148887786862568021898999999999999999999743356765465


Q ss_pred             CCEEEECCCCCHHHHHHHHHHCCHHH--------------------------------HHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             01233114540578888864110245--------------------------------4410013455543334445323
Q gi|254781019|r  227 FQYFCYHQPFTRMAEKAHIRLSKIVH--------------------------------QNLSVAEIEKAIGITTLYNRLI  274 (396)
Q Consensus       227 id~~v~H~p~~k~~~~~~~~l~~~~~--------------------------------~~~~~~~~e~~~~~~~~~~~~~  274 (396)
                      ||+++||.||.||++|...|++....                                .......+.+++.+++.+++++
T Consensus       250 fdy~ifHsP~cKlvqKs~arl~ynDf~~~~~~~~~~~~~~~~~~l~~s~~dr~~ek~~~~~s~~~~~~Kt~~sl~~~~~~  329 (462)
T KOG1393         250 FDYIIFHSPYCKLVQKSLARLLYNDFLLNPSQLPESAGLESTLKLDESYTDRDLEKAFIKISKPIFKKKTKPSLLAPRRN  329 (462)
T ss_pred             CCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCC
T ss_conf             77599857035667877777543144414001542001223333000111047788899876777775135116741247


Q ss_pred             CCCCCCHHHHHHHHHHHHC-CCCCCCCEEEEEEECCCCCEEEEEEEEEC----CHHHHHHCCCHHHHHHCCCCCCHHHHH
Q ss_conf             8543233899999999715-74369888999840798303778778602----268765203878897427223899999
Q gi|254781019|r  275 GNSYTASLYIALISLLDHS-SENLAGKRVGFFSYGSGCVAEFFSGIVQK----NYRKKSHQKRHQHIINSRIPISYQVYC  349 (396)
Q Consensus       275 GN~~SASi~l~L~slLe~~-~~~~~G~rIll~syGsG~~a~~f~~~v~~----~~~~~~~~~~~~~~L~~r~~l~~~~y~  349 (396)
                      |||||+|+|.+|+++|... ...+.|+||++||||||++|.|||++|.+    -.+......++..+|++|+.+++++|+
T Consensus       330 GNmYTaSly~~l~sll~~~~~d~l~Gkrig~FSYGSGlAAs~fs~~v~~da~p~~k~~~~~~d~~~rL~~R~~~tPe~F~  409 (462)
T KOG1393         330 GNMYTASLYASLASLLSAVPADELAGKRIGMFSYGSGLAASMFSLRVTQDATPLDKIIASLTDLKKRLDSRKCVTPEEFT  409 (462)
T ss_pred             CCCCCHHHHHHHHHHHHCCCHHHHHCCEEEEEEECCCCHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHH
T ss_conf             74224989999999885166044310378899605764120477884588871444567666177776415445889999


Q ss_pred             HHHHH-----CCCCCCCCCCCCCCCCCCEEEEEEEC-CEEEEEEECCCCC
Q ss_conf             99863-----06888876316667888669835655-3899886178888
Q gi|254781019|r  350 DLHQD-----IIPSVEGNCTIPHTTTGPFRLATIQN-HKRIYETTNFPDP  393 (396)
Q Consensus       350 ~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~i~~-~~R~Y~~~~~~~~  393 (396)
                      +.++-     ...++.|.++.+..++|+|||++|++ |||.|.++|.|+.
T Consensus       410 e~melre~~~~~~n~~p~gs~~~Lf~gtyYL~~vd~~~RRsY~~~~~~n~  459 (462)
T KOG1393         410 EIMELREDTHHKVNFVPQGSIESLFPGTYYLKRVDELHRRSYTLKPEPNN  459 (462)
T ss_pred             HHHHHHHHHCCCCCCCCCCCHHHCCCCCEEHHHHHHHHHHCCCCCCCCCC
T ss_conf             99986666302356778883532278715234345776530266789998


No 5  
>PRK04262 hypothetical protein; Provisional
Probab=100.00  E-value=0  Score=558.75  Aligned_cols=339  Identities=26%  Similarity=0.372  Sum_probs=308.6

Q ss_pred             CCCEEEEEEEECCCEEECHHHHHHHCCCCHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHC--CHHHCCEEEEEC
Q ss_conf             962066888734890455999998709998797630383246655998599999999999999727--957868999945
Q gi|254781019|r    1 MAIGIEDISFYTTNQYLDLSVIAEKYRLDVAKFYVGIGQERMSVLNPDEDIVTMAAAAALPIMQNQ--DKNLIDTLFFAT   78 (396)
Q Consensus         1 M~vGI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~~lGi~~r~v~~~~Ed~~tmA~~Aa~~~L~~~--~~~~Id~li~~T   78 (396)
                      |+|||.++|.|+|+++|+|+||++.+|++++||.+++||++|+|++++||++|||++|+++||+++  +|++||+||++|
T Consensus         1 M~vgI~g~G~YlP~~~v~n~el~~~~~~~~ewI~~rtGI~~R~va~~dE~t~~lA~~AA~~aL~~agi~~~dIdlIi~aT   80 (346)
T PRK04262          1 MMVGIVGYGAYIPRYRIKVEEIARVWGDDPEAIKKGLGVEEKSVPGPDEDTATIAVEAARNALKRAGIDPKEIGAVYVGS   80 (346)
T ss_pred             CCCEEEEEEEECCCEEECHHHHHHHHCCCHHHHEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEE
T ss_conf             92179899995899688499999885999647313668507877899999999999999999987599977889899964


Q ss_pred             CCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEE
Q ss_conf             78875460058888632026877358984142035888998789999739997699950332014588875334783024
Q gi|254781019|r   79 ESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACALVAKSPERKVLIVASDVARYDLGSSGEPTQGCGAV  158 (396)
Q Consensus        79 ~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~~~~~~~~t~GaGA~  158 (396)
                      +||++..|++|++||++||++++|.+||++++|+||++||.+|.+||++|..+++|||++|++++.+++..++++|+||+
T Consensus        81 ~Tpd~~~pstA~~vq~~LGl~~~~~afDi~aaCsGf~~aL~~A~~~I~sg~~~~~LVV~aD~~~~~~~~~~e~~~GaGa~  160 (346)
T PRK04262         81 ESHPYAVKPTATIVAEALGATPDLTAADLEFACKAGTAALQAAMGLVKSGMIKYALAIGADTAQGAPGDALEYTAAAGGA  160 (346)
T ss_pred             CCCCCCCCCHHHHHHHHHCCCCCEEEEEHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEECCCCCEE
T ss_conf             78886676506899998389988059861022114999999999999739997699983133347874056666888769


Q ss_pred             EEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEECCHHHH-HHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCC
Q ss_conf             68842687630353100015678651127588754235660169-89999999999999996298821101233114540
Q gi|254781019|r  159 AILISSQTSILEIEDITGIYTNDCMDFWRPNYRRTALVDGKYST-KIYLQSLEAVWHDYQKNKGHDFNDFQYFCYHQPFT  237 (396)
Q Consensus       159 Allv~~~~~~~~~~~~~~~~~~~~~df~rp~~~~~~~~dg~~~~-~~y~~~~~~a~~~~l~~~g~~~~did~~v~H~p~~  237 (396)
                      |+++++++....+... ..++.+..|||||.+.+++..+++++. ..|++.++++++++++++|++++|||||||||||.
T Consensus       161 A~~~g~~~~~~~~~~~-~~~~~~~~d~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~did~~v~HQAn~  239 (346)
T PRK04262        161 AFIIGAEEVIAEIEAT-YSYVTDTPDFWRREGEPYPRHGERFTGEPAYFKHIISAAKGLMEKLGTKPSDYDYAVFHQPNG  239 (346)
T ss_pred             EEEECCCCCCEEECCC-CCCCCCCCCCCCCCCCCCCCCCCCEECCEEHHHHHHHHHHHHHHHCCCCHHHCCEEECCCCCH
T ss_conf             9998779973374563-344578742205699824230771625232799999999999998299978858895167657


Q ss_pred             HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEEE
Q ss_conf             57888886411024544100134555433344453238543233899999999715743698889998407983037787
Q gi|254781019|r  238 RMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALISLLDHSSENLAGKRVGFFSYGSGCVAEFFS  317 (396)
Q Consensus       238 k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~slLe~~~~~~~G~rIll~syGsG~~a~~f~  317 (396)
                      +|++++.+++....+          ++.+.. +.+++|||++||||++|.++|++.   ++||||+|+|||+|+.+++|+
T Consensus       240 rii~~~~k~Lgi~~e----------kv~~nl-~~~~~GNTssASiplaL~~~l~~~---k~Gd~Ill~~fG~G~~~~~~~  305 (346)
T PRK04262        240 KFPLRAAKMLGFTKE----------QVKPGL-LTPYIGNTYSASALLGLAAVLDVA---KPGDRILVVSFGSGAGSDAFS  305 (346)
T ss_pred             HHHHHHHHHCCCCHH----------HHHCCC-CHHHHCCCHHHHHHHHHHHHHHCC---CCCCEEEEEEECCCCCEEEEE
T ss_conf             899999998299989----------922342-177647750336999999998438---998999999856973136899


Q ss_pred             EEEECCHHHHHHCC-CHHHHHHCCCCCCHHHHHHHHHH
Q ss_conf             78602268765203-87889742722389999999863
Q gi|254781019|r  318 GIVQKNYRKKSHQK-RHQHIINSRIPISYQVYCDLHQD  354 (396)
Q Consensus       318 ~~v~~~~~~~~~~~-~~~~~L~~r~~l~~~~y~~~~~~  354 (396)
                      ++|++++++..... .++++|++|+.+||++|++++..
T Consensus       306 ~~v~~~~~~~~~~~~~~~~~~~~r~~~~~~~y~~~~~~  343 (346)
T PRK04262        306 ITVTDRIEEKRDLAPTVEDYLERKKYVDYAVYAKYRGK  343 (346)
T ss_pred             EEECHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHCC
T ss_conf             99843578765326268999845730359999986282


No 6  
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III; InterPro: IPR004655   Beta-ketoacyl-acyl carrier protein synthase III (FabH), in general, initiates elongation in type II fatty acid synthase systems found in bacteria and plants. It is responsible for producing the multitude of fatty acid structures found in bacterial membranes . The two members of this subfamily from Bacillus subtilis differ from each other, and from FabH from Escherichia coli, in acyl group specificity. Active site residues include Cys112, His244 and Asn274 of Escherichia coli FabH. Cys-112 is the site of acyl group attachment. ; GO: 0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity, 0006633 fatty acid biosynthetic process.
Probab=100.00  E-value=0  Score=442.79  Aligned_cols=298  Identities=21%  Similarity=0.221  Sum_probs=257.9

Q ss_pred             CCCEEEEEEEECCCEEECHHHHHHHCCCCHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCC--HHHCCEEEEEC
Q ss_conf             9620668887348904559999987099987976303832466559985999999999999997279--57868999945
Q gi|254781019|r    1 MAIGIEDISFYTTNQYLDLSVIAEKYRLDVAKFYVGIGQERMSVLNPDEDIVTMAAAAALPIMQNQD--KNLIDTLFFAT   78 (396)
Q Consensus         1 M~vGI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~~lGi~~r~v~~~~Ed~~tmA~~Aa~~~L~~~~--~~~Id~li~~T   78 (396)
                      |+++|.++|.|+|+.+++|+||+++..++.|||..+|||++||+|.++|.+.+||++||++||+++.  ++|||+|||+|
T Consensus         1 ~~~~i~g~G~YlP~~v~tNadL~k~vDTSDEWI~TRTGI~eRRiAad~E~~S~mg~~AA~~Aie~A~i~~~dID~iivaT   80 (329)
T TIGR00747         1 MKAKILGTGSYLPEKVLTNADLEKMVDTSDEWIVTRTGIKERRIAADDETSSHMGFEAAKKAIENAGISKDDIDLIIVAT   80 (329)
T ss_pred             CEEEEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEEEC
T ss_conf             93578986030775135733345321068331123686100021472012689999999999985278866878679805


Q ss_pred             CCCCC-CCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCC---CC
Q ss_conf             78875-460058888632026877358984142035888998789999739997699950332014588875334---78
Q gi|254781019|r   79 ESSVD-QSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACALVAKSPERKVLIVASDVARYDLGSSGEPT---QG  154 (396)
Q Consensus        79 ~t~~~-~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~~~~~~~~t---~G  154 (396)
                      .||++ ..||.|+.||..||+. ++++||+..||.||+|||..|.+||+||.++++|||++|..+...|..+|-|   ||
T Consensus        81 ~~pd~l~fPS~Ac~~~~~LGi~-~~~aFD~~AACaGF~Y~Ls~A~~~i~SG~y~~vLvvGaeklSs~~D~~DR~TcvLFG  159 (329)
T TIGR00747        81 TTPDYLAFPSAACMVQAYLGIK-NIPAFDLSAACAGFIYGLSVAKQYIESGKYKTVLVVGAEKLSSTLDWTDRGTCVLFG  159 (329)
T ss_pred             CCCCCCCCCCHHHHHHHHCCCC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCEEEEC
T ss_conf             7800003778589999761866-763222365676689999999998615770268899851105536746687579960


Q ss_pred             CCEEEEEECCCCCCC--EEEECC----CCCCC--------CCCCCCC---CCCCCCEEECCHHHHHHHHHHHHHHHHHHH
Q ss_conf             302468842687630--353100----01567--------8651127---588754235660169899999999999999
Q gi|254781019|r  155 CGAVAILISSQTSIL--EIEDIT----GIYTN--------DCMDFWR---PNYRRTALVDGKYSTKIYLQSLEAVWHDYQ  217 (396)
Q Consensus       155 aGA~Allv~~~~~~~--~~~~~~----~~~~~--------~~~df~r---p~~~~~~~~dg~~~~~~y~~~~~~a~~~~l  217 (396)
                      |||.|.++++.+...  .+....    |....        ...+|-+   +..+++..|.|+.+|+..++.|.+.+++.+
T Consensus       160 DGAgA~v~g~s~~~~~~eI~~~~l~AdG~~~~~L~l~~~~~~~P~~~~~~~~~~~f~~M~G~evFk~Av~~m~~~~~~~l  239 (329)
T TIGR00747       160 DGAGAVVVGESEDDGGLEIISTNLGADGTQGELLYLPAGGRRCPFSKNTLQGSSPFITMEGNEVFKHAVRKMLKVVEETL  239 (329)
T ss_pred             CCCEEEEEECCCCCCCCEEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHH
T ss_conf             67226887045787763012346530564432132067776688777734466661787373258899999999999999


Q ss_pred             HHCCCCHHHCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC
Q ss_conf             96298821101233114540578888864110245441001345554333444532385432338999999997157436
Q gi|254781019|r  218 KNKGHDFNDFQYFCYHQPFTRMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALISLLDHSSENL  297 (396)
Q Consensus       218 ~~~g~~~~did~~v~H~p~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~slLe~~~~~~  297 (396)
                      ++++++.+|||||||||+|-|++++..++|....++          |-.+  +.+++|||+.||||++|.++++ .|++|
T Consensus       240 ~~a~l~~~DiD~lvPHQAN~RIi~a~ak~L~~~~~~----------Vv~T--v~khyGNTSAASiP~AL~E~~~-~G~iK  306 (329)
T TIGR00747       240 EAAGLSKEDIDWLVPHQANIRIIEALAKRLELKESK----------VVKT--VHKHYGNTSAASIPIALDELLE-TGRIK  306 (329)
T ss_pred             HHHCCCHHHCCEECCCCHHHHHHHHHHHHHCCCCCC----------EEEE--EECCCCCCHHHHHHHHHHHHHH-CCCCC
T ss_conf             971878304615555411168999999970898031----------6863--2001346304346678999874-17777


Q ss_pred             CCCEEEEEEECCCCC
Q ss_conf             988899984079830
Q gi|254781019|r  298 AGKRVGFFSYGSGCV  312 (396)
Q Consensus       298 ~G~rIll~syGsG~~  312 (396)
                      +||.+||.+||.|+.
T Consensus       307 ~Gd~~LL~AFGGGLt  321 (329)
T TIGR00747       307 KGDLLLLVAFGGGLT  321 (329)
T ss_pred             CCCEEEEEEECHHHH
T ss_conf             244888763060356


No 7  
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00  E-value=0  Score=400.60  Aligned_cols=298  Identities=17%  Similarity=0.168  Sum_probs=251.5

Q ss_pred             CCCEEEEEEEECCCEEECHHHHHHHCCCCHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCC--HHHCCEEEEEC
Q ss_conf             9620668887348904559999987099987976303832466559985999999999999997279--57868999945
Q gi|254781019|r    1 MAIGIEDISFYTTNQYLDLSVIAEKYRLDVAKFYVGIGQERMSVLNPDEDIVTMAAAAALPIMQNQD--KNLIDTLFFAT   78 (396)
Q Consensus         1 M~vGI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~~lGi~~r~v~~~~Ed~~tmA~~Aa~~~L~~~~--~~~Id~li~~T   78 (396)
                      |++.|.++|.|+|+.+|+|+||++..+.+++||.+++||++|++++++|++.+||++|+++||++++  |+|||+||++|
T Consensus         2 ~~a~I~g~g~ylP~~~v~n~el~~~~~~~~~~i~~~tGI~~R~~a~~~e~~~~ma~~Aa~~aL~~ag~~~~dIdlli~~t   81 (319)
T PRK09352          2 MYAKILGTGSYLPERVVTNDDLEKMVDTSDEWIVTRTGIKERRIAAPDETTSDLATEAAKKALEAAGIDPEDIDLIIVAT   81 (319)
T ss_pred             CCCEEEEEEEECCCCEECHHHHHHHCCCCHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEE
T ss_conf             63389899997899658699999871998899975649458998899999999999999999997598988997999974


Q ss_pred             CCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCC---CCCC
Q ss_conf             7887546005888863202687735898414203588899878999973999769995033201458887533---4783
Q gi|254781019|r   79 ESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACALVAKSPERKVLIVASDVARYDLGSSGEP---TQGC  155 (396)
Q Consensus        79 ~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~~~~~~~~---t~Ga  155 (396)
                      +|+++..|++|++||++||+. +|.+||++++|.||++||++|..++++|..+++|||++|..+..++..++.   .+||
T Consensus        82 ~t~d~~~P~~a~~v~~~LGl~-~~~~fDi~~~C~g~~~aL~~A~~~i~~g~~~~~Lvv~~e~~S~~~d~~d~~~~~lfGD  160 (319)
T PRK09352         82 TTPDYLFPSTACLVQARLGAK-NAPAFDLSAACSGFVYALSTADQFIRSGAYKNALVIGAEKLSRIVDWTDRSTCVLFGD  160 (319)
T ss_pred             CCCCCCCCHHHHHHHHHHCCC-CCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHCCCCCCCCCCHHEEEECC
T ss_conf             178998966999999997899-9737537434568999999999998669876269961101014245555000166158


Q ss_pred             CEEEEEECCCCCCCEEEECCCCCCCCCCCCC---------CCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHH
Q ss_conf             0246884268763035310001567865112---------7588754235660169899999999999999962988211
Q gi|254781019|r  156 GAVAILISSQTSILEIEDITGIYTNDCMDFW---------RPNYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHDFND  226 (396)
Q Consensus       156 GA~Allv~~~~~~~~~~~~~~~~~~~~~df~---------rp~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~~d  226 (396)
                      ||+|+++++.+....+...+.+... ..+.+         +.....+..++|+.++....+.++++++++++++|++++|
T Consensus       161 GAaA~vl~~~~~~~~~~~~~~tdg~-~~~~~~~~~~~~~~~~~~~~~~~m~g~~v~~~a~~~~~~~i~~~L~~~gl~~~d  239 (319)
T PRK09352        161 GAGAVVLEASEEPGILSTHLGSDGS-GGDLLYLPGGGSRGPASGETYLRMEGREVFKFAVREMAKVAREALEAAGLTPED  239 (319)
T ss_pred             CCCEEEEEECCCCCEEEEEEEECCC-CCCEEEECCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
T ss_conf             5007999754888736899997488-887589678888898787754676449999999985499999999874998323


Q ss_pred             CCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEE
Q ss_conf             01233114540578888864110245441001345554333444532385432338999999997157436988899984
Q gi|254781019|r  227 FQYFCYHQPFTRMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALISLLDHSSENLAGKRVGFFS  306 (396)
Q Consensus       227 id~~v~H~p~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~slLe~~~~~~~G~rIll~s  306 (396)
                      ||||++||++.++.+....++....++          +.   ....++|||+|||+|++|..+++ ++++++||+|+|++
T Consensus       240 Id~~i~Hq~~~~~~~~~~~~lgi~~ek----------~~---~~l~~~GNt~sasipi~L~~~~~-~g~lk~Gd~vll~~  305 (319)
T PRK09352        240 IDWLVPHQANLRIIDATAKKLGLPMEK----------VV---VTVDKYGNTSAASIPLALDEAVR-DGRIKRGDLVLLEG  305 (319)
T ss_pred             CCEEEECCCCHHHHHHHHHHCCCCHHH----------HH---HHHHHHCCHHHHHHHHHHHHHHH-CCCCCCCCEEEEEE
T ss_conf             878998267689999999981979888----------56---54875384588789999999998-39999979999999


Q ss_pred             ECCCCCEE
Q ss_conf             07983037
Q gi|254781019|r  307 YGSGCVAE  314 (396)
Q Consensus       307 yGsG~~a~  314 (396)
                      ||+|+...
T Consensus       306 ~G~G~s~~  313 (319)
T PRK09352        306 FGGGLTWG  313 (319)
T ss_pred             EEHHHEEE
T ss_conf             84474317


No 8  
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00  E-value=0  Score=401.31  Aligned_cols=299  Identities=16%  Similarity=0.161  Sum_probs=244.1

Q ss_pred             CEEEEEEEECCCEEECHHHHHHH-------CCCCHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCC--HHHCCE
Q ss_conf             20668887348904559999987-------099987976303832466559985999999999999997279--578689
Q gi|254781019|r    3 IGIEDISFYTTNQYLDLSVIAEK-------YRLDVAKFYVGIGQERMSVLNPDEDIVTMAAAAALPIMQNQD--KNLIDT   73 (396)
Q Consensus         3 vGI~~i~~y~P~~~v~~~~l~~~-------~g~~~~k~~~~lGi~~r~v~~~~Ed~~tmA~~Aa~~~L~~~~--~~~Id~   73 (396)
                      |.|.++|+|+|+.+|+|+||+..       +++.++||.+.+||++|++++++|.+.+||++|+++||++++  |+|||+
T Consensus         1 v~I~~~g~ylP~~~vtn~el~~~~~~~~~~~~~~~~~i~~~tGI~~Rr~a~~~e~~sdma~~Aa~~AL~~agi~p~dIDl   80 (339)
T PRK09258          1 VFINSLAYELAPVVVTSSEIESRLAPLYQRLRIPMGQLEALTGIRERRWWPKGHQLSDGATEAARKALAEAGIDASDIGL   80 (339)
T ss_pred             CEEEEEEEECCCCCCCHHHHHHHHCCCHHHHCCCCCHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHCCE
T ss_conf             98989998779961748999977533045425871132334673035367999988999999999999975999899999


Q ss_pred             EEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCC------
Q ss_conf             99945788754600588886320268773589841420358889987899997399976999503320145888------
Q gi|254781019|r   74 LFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACALVAKSPERKVLIVASDVARYDLGS------  147 (396)
Q Consensus        74 li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~~~~------  147 (396)
                      ||++|+||++..|++|++||++||++++|.+||++.+|+||++||.+|..+|++|..+++|||++|..+...+.      
T Consensus        81 lI~at~tpd~~~P~tA~~v~~~LGl~~~~~afDi~~aCsGf~~aL~~A~~~i~sg~~~~~LvV~aE~~s~~~d~~~~~~~  160 (339)
T PRK09258         81 LINTSVCRDQLEPATACRVHAELGLSKDCAIFDISNACLGFLNGMLDAANMIELGQIDYGLVVSGESARDIVEATIARML  160 (339)
T ss_pred             EEEECCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHCC
T ss_conf             99905114853781899999984799874786510431679999999999997699988999975412100244432102


Q ss_pred             -------------CCCCCCCCCEEEEEECCCCCCC---EEEECCCCCCCCCCCCC--C--CCCCCCEEECCHHHHHHHHH
Q ss_conf             -------------7533478302468842687630---35310001567865112--7--58875423566016989999
Q gi|254781019|r  148 -------------SGEPTQGCGAVAILISSQTSIL---EIEDITGIYTNDCMDFW--R--PNYRRTALVDGKYSTKIYLQ  207 (396)
Q Consensus       148 -------------~~~~t~GaGA~Allv~~~~~~~---~~~~~~~~~~~~~~df~--r--p~~~~~~~~dg~~~~~~y~~  207 (396)
                                   ....++||||+|+++++.+...   .+.........+..+.+  .  +.......+||...++..++
T Consensus       161 ~~~~~~~~~f~~~~a~~~~GdGA~A~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~  240 (339)
T PRK09258        161 ADPTMTRQNFAQSLATLTLGSGAVAVVLTRGSLVPRAHRLLGGVTRAATEHHQLCQGGLDEAGHGLMRTDAVLLLKEGVE  240 (339)
T ss_pred             CCCCCHHHHCCCCCCCEECCCCEEEEEEECCCCCCCCCEEECCCCCCCCCHHHCCCCCCCCCCCCCEEECHHHHHHHHHH
T ss_conf             46662033302211104216621799995367788886451455457721001024788878765565358999999999


Q ss_pred             HHHHHHHHHHHHCCCCHHHCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
Q ss_conf             99999999999629882110123311454057888886411024544100134555433344453238543233899999
Q gi|254781019|r  208 SLEAVWHDYQKNKGHDFNDFQYFCYHQPFTRMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALI  287 (396)
Q Consensus       208 ~~~~a~~~~l~~~g~~~~did~~v~H~p~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~  287 (396)
                      .++++++++++++|++++|||+|++||++.++.+...+++....++-             .....++|||+|||||++|.
T Consensus       241 ~~~~~~~~~L~~~gl~~~dId~~v~HQan~~~~~~i~~~Lgi~~ek~-------------~~~~~~~GNT~sASiPlaL~  307 (339)
T PRK09258        241 LAVDTWEAFLQQLGWSVEQVDKVVCHQVGAAHTRAVLKALGIDPEKV-------------FPTFPLLGNMGPVSLPITLA  307 (339)
T ss_pred             HHHHHHHHHHHHCCCCHHHCCEEEECCCCHHHHHHHHHHCCCCHHHH-------------HCHHHHHCCHHHHHHHHHHH
T ss_conf             99999999999839998998899862576999999999819687771-------------03186458689899999999


Q ss_pred             HHHHHCCCCCCCCEEEEEEECCCCCEEE
Q ss_conf             9997157436988899984079830377
Q gi|254781019|r  288 SLLDHSSENLAGKRVGFFSYGSGCVAEF  315 (396)
Q Consensus       288 slLe~~~~~~~G~rIll~syGsG~~a~~  315 (396)
                      .+++ .+++++||+|+|+|||+|+....
T Consensus       308 ~a~~-~g~ik~Gd~vll~~~GaGl~~~~  334 (339)
T PRK09258        308 MAAE-QGFLKKGDRVALLGIGSGLNCSM  334 (339)
T ss_pred             HHHH-CCCCCCCCEEEEEEEEHHHHHHH
T ss_conf             9998-29999979999998847876556


No 9  
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=100.00  E-value=0  Score=401.09  Aligned_cols=299  Identities=20%  Similarity=0.208  Sum_probs=258.0

Q ss_pred             CCCEEEEEEEECCCEEECHHHHHHHCCCCHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCC--HHHCCEEEEEC
Q ss_conf             9620668887348904559999987099987976303832466559985999999999999997279--57868999945
Q gi|254781019|r    1 MAIGIEDISFYTTNQYLDLSVIAEKYRLDVAKFYVGIGQERMSVLNPDEDIVTMAAAAALPIMQNQD--KNLIDTLFFAT   78 (396)
Q Consensus         1 M~vGI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~~lGi~~r~v~~~~Ed~~tmA~~Aa~~~L~~~~--~~~Id~li~~T   78 (396)
                      |+++|.++|.|+|+..++|+++++..+.+.+||...+||++|+++.++|.+.+||++|+++||++++  |+|||+||++|
T Consensus         2 ~~a~i~g~G~~lP~~~vtn~d~e~~~~tsdewI~~rtGir~R~~a~~~e~~s~la~~Aa~~AL~~Agi~~~dIDlII~aT   81 (323)
T COG0332           2 MNAKILGIGSYLPERVVTNADLEKRVDTSDEWIETRTGIRERRIAADDETTSDLAVEAARKALEDAGISPDDIDLIIVAT   81 (323)
T ss_pred             CCCEEEEEEEECCCCCCCHHHHHHCCCCCCCEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEC
T ss_conf             85269988852687655778898536887110553037711231699954778999999999998699989998899966


Q ss_pred             CCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCC---CCC
Q ss_conf             78875460058888632026877358984142035888998789999739997699950332014588875334---783
Q gi|254781019|r   79 ESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACALVAKSPERKVLIVASDVARYDLGSSGEPT---QGC  155 (396)
Q Consensus        79 ~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~~~~~~~~t---~Ga  155 (396)
                      .||++..|++|+.||+.||+.+ |.+||++.+|+||++||.+|..+|++|.++++|||++|+.+..++..+|.|   +||
T Consensus        82 ~tpd~~~Ps~A~~vq~~LG~~~-~~afDl~aaCsgf~yaL~~A~~~i~sG~~k~vLVVgae~~S~~ld~~dR~t~vlFgD  160 (323)
T COG0332          82 STPDHLFPSTACLVQARLGLGG-APAFDLQAACSGFLYALSVADGLIRSGGYKNVLVVGAETLSRILDWTDRDTCVLFGD  160 (323)
T ss_pred             CCCCCCCCHHHHHHHHHHCCCC-CCEEECHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHCCCCHHHCCCEEEECC
T ss_conf             7866668817999999858998-666660535599999999999999758977799981058404588766561289737


Q ss_pred             CEEEEEECCCC-CCCEEEECCCCCCCCCCCCCCCCC----------CCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCH
Q ss_conf             02468842687-630353100015678651127588----------7542356601698999999999999999629882
Q gi|254781019|r  156 GAVAILISSQT-SILEIEDITGIYTNDCMDFWRPNY----------RRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHDF  224 (396)
Q Consensus       156 GA~Allv~~~~-~~~~~~~~~~~~~~~~~df~rp~~----------~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~  224 (396)
                      ||.|+++++.+ ....+....++......-.+.|..          .....|+|+.+++..++.+++++++.+++++++.
T Consensus       161 GAgAvvl~~~~~~~~i~~~~l~sdg~~~~~l~~~~~~~~~~~~~~~~~~~~m~Gr~vfk~av~~~~~~~~~~L~~~~l~~  240 (323)
T COG0332         161 GAGAVVLEATEDDNGILDTDLGSDGSQGDLLYLPGGGSATPKEESGGGLLVMDGREVFKFAVRAMPKAIEEVLEKAGLTP  240 (323)
T ss_pred             CCEEEEEECCCCCCCEEEEEEECCCCCCCEEECCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCH
T ss_conf             73599983578776623423323566787442267777666444565323544588999999999999999999849998


Q ss_pred             HHCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEE
Q ss_conf             11012331145405788888641102454410013455543334445323854323389999999971574369888999
Q gi|254781019|r  225 NDFQYFCYHQPFTRMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALISLLDHSSENLAGKRVGF  304 (396)
Q Consensus       225 ~did~~v~H~p~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~slLe~~~~~~~G~rIll  304 (396)
                      +|||||++||++.+|.+....++....++-             .....++|||++||||++|..+++ .+++++||+|+|
T Consensus       241 ~dId~~vpHQan~ri~~~i~~~l~~~~~k~-------------~~~~~~yGNtsaAsiplaL~~~~~-~g~ik~Gd~vll  306 (323)
T COG0332         241 EDIDWFVPHQANLRIIEAIAKKLGIPEEKV-------------VVTVDKYGNTSAASIPLALDEALR-EGRIKPGDLVLL  306 (323)
T ss_pred             HHCCEECCCCCCHHHHHHHHHHCCCCHHHH-------------HHHHHHHCCCCCCHHHHHHHHHHH-HCCCCCCCEEEE
T ss_conf             899887206454999999999829988997-------------568987554632308999998745-089899989999


Q ss_pred             EEECCCCCEE
Q ss_conf             8407983037
Q gi|254781019|r  305 FSYGSGCVAE  314 (396)
Q Consensus       305 ~syGsG~~a~  314 (396)
                      ++||.|+.--
T Consensus       307 ~~fG~Gltwg  316 (323)
T COG0332         307 EAFGGGLTWG  316 (323)
T ss_pred             EEECCCCEEE
T ss_conf             9303753213


No 10 
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00  E-value=0  Score=391.60  Aligned_cols=296  Identities=18%  Similarity=0.178  Sum_probs=246.0

Q ss_pred             CCEEEEEEEECCCEEECHHHHHHHCCCCHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCC--HHHCCEEEEECC
Q ss_conf             620668887348904559999987099987976303832466559985999999999999997279--578689999457
Q gi|254781019|r    2 AIGIEDISFYTTNQYLDLSVIAEKYRLDVAKFYVGIGQERMSVLNPDEDIVTMAAAAALPIMQNQD--KNLIDTLFFATE   79 (396)
Q Consensus         2 ~vGI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~~lGi~~r~v~~~~Ed~~tmA~~Aa~~~L~~~~--~~~Id~li~~T~   79 (396)
                      +|+|.++|.|+|+++|+|+||++..|++++|+.+++||++|+++ ++|.+.+||++|+++||++++  |+|||+||++|.
T Consensus         4 ~v~I~g~g~ylP~~~v~n~el~~~~~~~~~~i~~~tGI~~R~~a-~~e~~sdma~~Aa~~aL~~agi~~~dIdliI~~s~   82 (329)
T PRK07204          4 YISIKGIGTYLPKRKVDSLEIDKMLDVPEGWTLKKAGVKTRYFV-DGETSSYMGAEAAKKAVEDAKLTWDDIDCIICGSG   82 (329)
T ss_pred             CEEEEEEEEECCCCEECHHHHHHHCCCCHHHHHHCCCCEEEEEC-CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEECC
T ss_conf             54999999966997285999998809987999762386168557-99985999999999999975989888849999257


Q ss_pred             CCCCCCHHHHHHHHHHHCCCCC-CEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCC---CCCCC
Q ss_conf             8875460058888632026877-3589841420358889987899997399976999503320145888753---34783
Q gi|254781019|r   80 SSVDQSKSAAIWLHKLLGLNSS-CRVVELKQACYSATCALHMACALVAKSPERKVLIVASDVARYDLGSSGE---PTQGC  155 (396)
Q Consensus        80 t~~~~~~~~a~~v~~~Lgl~~~-~~~~Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~~~~~~~---~t~Ga  155 (396)
                      |+++..|++|++||++||++.. +.+||++++|.|+++||.+|..++++|..+++|||++|..+...+..++   +.+||
T Consensus        83 t~d~~~P~~A~~v~~~LGl~~~~~~afDi~~aC~g~~~al~~A~~~i~~g~~~~~Lvv~~e~~S~~~d~~~~~~~~lfGD  162 (329)
T PRK07204         83 TIQQAIPSTASLIQEQLGLQHSGIPCFDINSTCLSFITALDTISYAIECGRYKNVVIISSEISSVGLNWGQNESSILFGD  162 (329)
T ss_pred             CCCCCCCCHHHHHHHHHCCCCCCCEEEEHHHHCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCEECC
T ss_conf             89988980999999996478888355003011448999999999998669865258960334554436444331201146


Q ss_pred             CEEEEEECCCCCCCEEEECC-CCCC--CCCCCC-----CC-C-------CCCCCEEECCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             02468842687630353100-0156--786511-----27-5-------8875423566016989999999999999996
Q gi|254781019|r  156 GAVAILISSQTSILEIEDIT-GIYT--NDCMDF-----WR-P-------NYRRTALVDGKYSTKIYLQSLEAVWHDYQKN  219 (396)
Q Consensus       156 GA~Allv~~~~~~~~~~~~~-~~~~--~~~~df-----~r-p-------~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~  219 (396)
                      ||+|+++++.+....+.... .+++  .+..+.     +. |       .+.....++|+..++...+.+++++++++++
T Consensus       163 GA~A~vl~~~~~~~~il~~~~~t~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~L~~  242 (329)
T PRK07204        163 GAAAVVITKGDHSSSIIASHMETYSSGAHLSEIRGGGTMIHPREYSEERKEDFLFDMNGRAIFKLSSKYLMKFIDKLLMD  242 (329)
T ss_pred             CCEEEEEECCCCCCCEEEEEEEECCCCHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             51489995058888447799765479704411136985478632333346673176057999999986269999999987


Q ss_pred             CCCCHHHCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCC
Q ss_conf             29882110123311454057888886411024544100134555433344453238543233899999999715743698
Q gi|254781019|r  220 KGHDFNDFQYFCYHQPFTRMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALISLLDHSSENLAG  299 (396)
Q Consensus       220 ~g~~~~did~~v~H~p~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~slLe~~~~~~~G  299 (396)
                      +|++++|||||++||++.++.+....++....++-             .....++|||+|||+|++|..+++ .+++++|
T Consensus       243 ~gl~~~DId~~i~HQ~n~~~~~~i~~~lgip~ek~-------------~~~~~~~GNt~sasipi~L~~~~~-~g~i~~G  308 (329)
T PRK07204        243 TGYSLADIDLIVPHQASGPAMRLIRKKLGVDEERF-------------MTIFEDYGNMISASIPVALFEAIK-QKKVQRG  308 (329)
T ss_pred             CCCCHHHCCEEEEECCCHHHHHHHHHHCCCCHHHH-------------HHHHHHHCCHHHHHHHHHHHHHHH-CCCCCCC
T ss_conf             19997889989981488899999999809697762-------------103631180898889999999998-4999996


Q ss_pred             CEEEEEEECCCCC
Q ss_conf             8899984079830
Q gi|254781019|r  300 KRVGFFSYGSGCV  312 (396)
Q Consensus       300 ~rIll~syGsG~~  312 (396)
                      |+|+++|||+|+.
T Consensus       309 d~vll~~~GaG~s  321 (329)
T PRK07204        309 NKILLLGTSAGLS  321 (329)
T ss_pred             CEEEEEEEEHHHH
T ss_conf             9999999886741


No 11 
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00  E-value=0  Score=391.65  Aligned_cols=310  Identities=19%  Similarity=0.148  Sum_probs=241.2

Q ss_pred             CCCEEEEEEEECCCEEECHHHHHHHC-------CCCHHHHHHHCCCCEEEEC-----CCCCCHHHHHHHHHHHHHHHCC-
Q ss_conf             96206688873489045599999870-------9998797630383246655-----9985999999999999997279-
Q gi|254781019|r    1 MAIGIEDISFYTTNQYLDLSVIAEKY-------RLDVAKFYVGIGQERMSVL-----NPDEDIVTMAAAAALPIMQNQD-   67 (396)
Q Consensus         1 M~vGI~~i~~y~P~~~v~~~~l~~~~-------g~~~~k~~~~lGi~~r~v~-----~~~Ed~~tmA~~Aa~~~L~~~~-   67 (396)
                      |+|.|.++|.|+|++.|+|+||++..       ++..+||.+++||++|+++     .++|++.+||++|+++||++++ 
T Consensus         1 m~v~I~g~G~ylP~~vvtN~el~~~~~~~~~~~~~~~~~I~~rtGI~~Rr~a~~~~~~~~et~sdma~~Aa~~AL~~Agi   80 (378)
T PRK06816          1 MNVYITSTGAFLPGEPVDNDEMEAYLGLINGRPSRLRRIILRNNGIKTRHYAIDPTGETTHSNAQMAAHAIRDLLDDAGF   80 (378)
T ss_pred             CCCEEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCC
T ss_conf             96399999997899825589999986415788774888977545821378740788887667899999999999997599


Q ss_pred             -HHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCC
Q ss_conf             -5786899994578875460058888632026877358984142035888998789999739997699950332014588
Q gi|254781019|r   68 -KNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACALVAKSPERKVLIVASDVARYDLG  146 (396)
Q Consensus        68 -~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~~~  146 (396)
                       |+|||+||++|.||++..|++|+.||++||++ +|.+||++++|+||++||.+|..+|++|..+++|||++|+.+..++
T Consensus        81 ~~~dIDliI~aT~tpd~~~P~tA~~Vq~~LGl~-~~~~fDi~~aCsgf~~aL~~A~~~I~sG~~k~vLVV~aE~~S~~l~  159 (378)
T PRK06816         81 GLEDVELLACGTSQGDQLMPGHAVMVHGELGNP-PCEVVSFHGVCAAGMMALKYAYLSVKAGESSNAVATASELASRLFR  159 (378)
T ss_pred             CHHHCCEEEEECCCCCCCCCCHHHHHHHHHCCC-CCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHC
T ss_conf             989999999966868987854899999981899-8540321101237899999999999748988799993440112103


Q ss_pred             CC-----------------CC-------CCCCCCEEEEEECCCCCC--CEEE--ECC-CCCCCCCCCCC-----------
Q ss_conf             87-----------------53-------347830246884268763--0353--100-01567865112-----------
Q gi|254781019|r  147 SS-----------------GE-------PTQGCGAVAILISSQTSI--LEIE--DIT-GIYTNDCMDFW-----------  186 (396)
Q Consensus       147 ~~-----------------~~-------~t~GaGA~Allv~~~~~~--~~~~--~~~-~~~~~~~~df~-----------  186 (396)
                      ..                 -.       +++||||.|+++++.+..  ....  +.. .++. +.++.+           
T Consensus       160 ~~~~~~~~~~~~~~d~~~~~~f~~~fl~~lfGDGAgA~vl~~~~~~~g~~~~i~~~~~~s~~-~~~~~~~~~G~~~~~~~  238 (378)
T PRK06816        160 ASRYEAEEERVEELEEGPEIAFEKDFLRWMLSDGAGAVLLENKPRPGGLSLRIDWIDLFSFA-DEFPVCMYAGADKNEDG  238 (378)
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCC-CCCCCCEECCCCCCCCC
T ss_conf             43223211222201244100332001355556666369976438888743454310145545-55663021476667787


Q ss_pred             --------CC-----CCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCCHHHHHHHHHHCCHHHH
Q ss_conf             --------75-----88754235660169899999999999999962988211012331145405788888641102454
Q gi|254781019|r  187 --------RP-----NYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHDFNDFQYFCYHQPFTRMAEKAHIRLSKIVHQ  253 (396)
Q Consensus       187 --------rp-----~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~~did~~v~H~p~~k~~~~~~~~l~~~~~~  253 (396)
                              .|     .+.....+|++..++.....+++.++++++++|++++|||+||+||++.+|.+.+.+++.+.. -
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~L~~~gl~~~dId~~vpHQAn~ri~~~v~~~l~~~g-~  317 (378)
T PRK06816        239 ELKGWSDYSPAEAEAAGALALKQDVRLLNEVIVVWGVDPYLELVDKRRLDPDAIDHFLPHYSSEYFREKIVELLAKAG-L  317 (378)
T ss_pred             CCCCCCCCCHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEECCCCHHHHHHHHHHHHHHCC-C
T ss_conf             657744478777753354011125899999999999999999999849998998888126105999999999987535-8


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCC-CCEEEEEEEEE
Q ss_conf             410013455543334445323854323389999999971574369888999840798-30377877860
Q gi|254781019|r  254 NLSVAEIEKAIGITTLYNRLIGNSYTASLYIALISLLDHSSENLAGKRVGFFSYGSG-CVAEFFSGIVQ  321 (396)
Q Consensus       254 ~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~slLe~~~~~~~G~rIll~syGsG-~~a~~f~~~v~  321 (396)
                      .+.    ++++   .....++|||++||||++|..+++ ++++++||+|+|++.||| ...-...++|+
T Consensus       318 ~ip----~ek~---~~~v~~~GNT~sASiPiaL~~a~~-~g~ik~Gd~vll~~~~sg~~~~g~~ll~~~  378 (378)
T PRK06816        318 MIP----EEKW---FTNLATVGNTGSASIFIMLDELFR-SGRLKPGQTILCFVPESGRFSAAFMLLTVV  378 (378)
T ss_pred             CCC----HHHH---EECCCCCCCHHHHHHHHHHHHHHH-CCCCCCCCEEEEEECCCCCHHHEEEEEEEC
T ss_conf             998----6661---601423270799999999999998-499999999999962476761546999979


No 12 
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00  E-value=0  Score=386.81  Aligned_cols=298  Identities=17%  Similarity=0.163  Sum_probs=250.0

Q ss_pred             CEEEEEEEECCCEEECHHHHHHHCCCCHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCC--HHHCCEEEEECCC
Q ss_conf             20668887348904559999987099987976303832466559985999999999999997279--5786899994578
Q gi|254781019|r    3 IGIEDISFYTTNQYLDLSVIAEKYRLDVAKFYVGIGQERMSVLNPDEDIVTMAAAAALPIMQNQD--KNLIDTLFFATES   80 (396)
Q Consensus         3 vGI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~~lGi~~r~v~~~~Ed~~tmA~~Aa~~~L~~~~--~~~Id~li~~T~t   80 (396)
                      +-|.++|.|+|+.+|+++|+++..|.+.+|+.+++||++|++++++|++.+||++|+++||++++  |+|||+||++|+|
T Consensus         5 ~~I~g~g~ylP~~~v~n~~~~~~~~~~~~~i~~~~Gi~~R~~a~~~e~~~dma~~Aa~~aL~~ag~~~~dIdllI~~t~~   84 (326)
T PRK12879          5 ARITGWGKYVPPRVLTNDDLATFIDTSDEWIVQRTGIKERRIAHVNEFTSDLAIKAAERALARAGLDASDIDLIIVATTT   84 (326)
T ss_pred             CEEEEEEEECCCCEECHHHHHHHHCCCHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCC
T ss_conf             78999999889965859999988099888998644964899889999999999999999999759798899699995267


Q ss_pred             CCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCC---CCCCCCE
Q ss_conf             8754600588886320268773589841420358889987899997399976999503320145888753---3478302
Q gi|254781019|r   81 SVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACALVAKSPERKVLIVASDVARYDLGSSGE---PTQGCGA  157 (396)
Q Consensus        81 ~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~~~~~~~---~t~GaGA  157 (396)
                      +++..|++|++||++||++ +|.+||++++|+|+++||++|.+++++++.+++|||++|..+...+..++   +.+||||
T Consensus        85 ~d~~~P~~a~~v~~~LGl~-~~~~fdi~~~C~g~~~aL~~A~~~i~~g~~~~~Lvv~~e~~s~~~d~~~~~~~~lfGDGA  163 (326)
T PRK12879         85 PDYLFPSTASQVQARLGIP-NAAAFDINAACSGFLYGLELANGLITSGSYKKVLVIGAERLSKYTDWTDRTTAILFGDGA  163 (326)
T ss_pred             CCCCCCHHHHHHHHHHCCC-CCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHCCCCCCCCCHHHHHCCCCCC
T ss_conf             8982775999999986849-951454012203799999999999866875503650202213532435433321017863


Q ss_pred             EEEEECCCCCCCEEE-ECCCCCCCCCCCCCC-------------CCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             468842687630353-100015678651127-------------588754235660169899999999999999962988
Q gi|254781019|r  158 VAILISSQTSILEIE-DITGIYTNDCMDFWR-------------PNYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHD  223 (396)
Q Consensus       158 ~Allv~~~~~~~~~~-~~~~~~~~~~~df~r-------------p~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~  223 (396)
                      +|+++++++....+. ....+.. +..+++.             .....+..++|+..+....+.+++.+++++++.|++
T Consensus       164 aA~ll~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~L~~~gl~  242 (326)
T PRK12879        164 GAVVVEATEEPPGLIDYVLGTDG-DGGDILYRTGLGTTMDRFDLDNGGFYFQFNGREVFKWAVRGMPKAAKQVLEKAGLT  242 (326)
T ss_pred             EEEEEEECCCCCCEEEEEEEECC-CCCCEEEECCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             38998724888834789998537-77665883478876887553356750786429999999875699999999985999


Q ss_pred             HHHCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEEE
Q ss_conf             21101233114540578888864110245441001345554333444532385432338999999997157436988899
Q gi|254781019|r  224 FNDFQYFCYHQPFTRMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALISLLDHSSENLAGKRVG  303 (396)
Q Consensus       224 ~~did~~v~H~p~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~slLe~~~~~~~G~rIl  303 (396)
                      ++||||+++||++.++.+....++....++.          .   ...+++|||+|+|+|++|..+++ .+++++||+|+
T Consensus       243 ~~did~~i~Hq~~~~~~~~i~~~Lgl~~~k~----------~---~~l~~~GN~~sasi~~~L~~~~~-~g~l~~Gd~vl  308 (326)
T PRK12879        243 KDDIDWVIPHQANLRIIESLCEKLGIPLEKT----------L---VNVEYYGNTSAATIPLALCLALE-QGKIKPGDTLL  308 (326)
T ss_pred             HHHCCEEEECCCCHHHHHHHHHHCCCCHHHH----------H---HHHHCCCCHHHHHHHHHHHHHHH-CCCCCCCCEEE
T ss_conf             7788989986887899999999809798885----------6---56732274377789999999997-39999969999


Q ss_pred             EEEECCCCCEEEE
Q ss_conf             9840798303778
Q gi|254781019|r  304 FFSYGSGCVAEFF  316 (396)
Q Consensus       304 l~syGsG~~a~~f  316 (396)
                      ++|||+|......
T Consensus       309 l~~~G~G~s~~~~  321 (326)
T PRK12879        309 LYGFGAGLTWAAL  321 (326)
T ss_pred             EEEECHHHHHEEE
T ss_conf             9999167322489


No 13 
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=100.00  E-value=0  Score=386.62  Aligned_cols=295  Identities=19%  Similarity=0.193  Sum_probs=244.5

Q ss_pred             CEEEEEEEECCCEEECHHHHHHHCCCCHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCC--HHHCCEEEEECCC
Q ss_conf             20668887348904559999987099987976303832466559985999999999999997279--5786899994578
Q gi|254781019|r    3 IGIEDISFYTTNQYLDLSVIAEKYRLDVAKFYVGIGQERMSVLNPDEDIVTMAAAAALPIMQNQD--KNLIDTLFFATES   80 (396)
Q Consensus         3 vGI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~~lGi~~r~v~~~~Ed~~tmA~~Aa~~~L~~~~--~~~Id~li~~T~t   80 (396)
                      |+|.++|.|+|+++|+|+||++..+.+++||.+++||++|++++++|++.+||++|+++||++++  |++||+||++|+|
T Consensus         1 v~I~g~g~ylP~~~v~n~e~~~~~~~~~~~i~~~tGI~~R~~~~~~e~~sdma~~Aa~~aL~~ag~~~~dIDllI~~t~t   80 (327)
T CHL00203          1 VHILSTGSSVPNFSIENQQFSQIVETSDEWISTRTGIKKRRLAGSSTSLTKLAAEAANKALHKAGWSAKDIDLIILATST   80 (327)
T ss_pred             CEEEEEEEECCCCEECHHHHHHHCCCCHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCC
T ss_conf             97999999789917849999987299868885457940797789999999999999999997549997898889995004


Q ss_pred             CCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCC---CCCCCCE
Q ss_conf             8754600588886320268773589841420358889987899997399976999503320145888753---3478302
Q gi|254781019|r   81 SVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACALVAKSPERKVLIVASDVARYDLGSSGE---PTQGCGA  157 (396)
Q Consensus        81 ~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~~~~~~~---~t~GaGA  157 (396)
                      |++ .+++|++||+.||+. ++.+||++++|.||++||.+|..+|++|..+++|||++|..+...+..++   +++||||
T Consensus        81 pd~-~~~~a~~v~~~LG~~-~~~afDv~~aC~g~~~al~~A~~~i~sg~~~~~LvV~~E~~S~~~~~~~~~~~~~fGDgA  158 (327)
T CHL00203         81 PDD-LFGSASQLQAEIGAT-QAVAFDITAACSGFIFALVTAGQFIQSGSYRNILIIGADTLSRWIDWSDRRTCILFGDGA  158 (327)
T ss_pred             CCC-CCCHHHHHHHHHCCC-CCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHCCCCC
T ss_conf             676-787699999985899-863765520044799999999999856984514785143235765646454531137852


Q ss_pred             EEEEECCCCCC----CEEEECC-CCCCCCCCCC-CC------------CC-CCCCEEECCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             46884268763----0353100-0156786511-27------------58-87542356601698999999999999999
Q gi|254781019|r  158 VAILISSQTSI----LEIEDIT-GIYTNDCMDF-WR------------PN-YRRTALVDGKYSTKIYLQSLEAVWHDYQK  218 (396)
Q Consensus       158 ~Allv~~~~~~----~~~~~~~-~~~~~~~~df-~r------------p~-~~~~~~~dg~~~~~~y~~~~~~a~~~~l~  218 (396)
                      +|+++++.|..    +.+.... +... +...+ +.            |. ...+..++|+..++...+.++..++++++
T Consensus       159 ~A~il~~~~~~~~~~l~~~~~tdg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~  237 (327)
T CHL00203        159 GAVAIGECPTEENSILGFKLCTDGSLN-SHLQLMNKPDNMQLFNQTKYPMGGFNSISMNGKEVYKFAVFQVPAVIQECLN  237 (327)
T ss_pred             EEEEEEECCCCCCCEEEEEEEECCCCC-CEEEEECCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHH
T ss_conf             489874046777844789998667777-6178724787766567665667885427875599999999999999999998


Q ss_pred             HCCCCHHHCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCC
Q ss_conf             62988211012331145405788888641102454410013455543334445323854323389999999971574369
Q gi|254781019|r  219 NKGHDFNDFQYFCYHQPFTRMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALISLLDHSSENLA  298 (396)
Q Consensus       219 ~~g~~~~did~~v~H~p~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~slLe~~~~~~~  298 (396)
                      ++|++++|||+|++||++.++.+....++....++..             ....++|||+|||||++|..+++ ++++++
T Consensus       238 ~~g~~~~did~~v~HQ~~~~~~~~i~~~lgl~~~k~~-------------~~~~~~GNt~sasip~~L~~~~~-~g~l~~  303 (327)
T CHL00203        238 ALNISIDEVDWLLLHQANQRILEAVADRLSIPHSKMI-------------TNLEHYGNTSAASIPLALDEAIK-DNKIQP  303 (327)
T ss_pred             HCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCHHHHH-------------HHHHHHCCHHHHHHHHHHHHHHH-CCCCCC
T ss_conf             7699811188799886889999999998197978866-------------54764496688899999999998-499999


Q ss_pred             CCEEEEEEECCCCCEE
Q ss_conf             8889998407983037
Q gi|254781019|r  299 GKRVGFFSYGSGCVAE  314 (396)
Q Consensus       299 G~rIll~syGsG~~a~  314 (396)
                      ||+|+|+|||+|+..-
T Consensus       304 Gd~vll~g~G~G~s~g  319 (327)
T CHL00203        304 GQIIVLSGFGAGLTWG  319 (327)
T ss_pred             CCEEEEEEEEHHHHHE
T ss_conf             8999999985572026


No 14 
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00  E-value=0  Score=389.12  Aligned_cols=295  Identities=19%  Similarity=0.206  Sum_probs=233.5

Q ss_pred             CCEEEEEEEECCCEEECHHHHHHH------------------------CCCCHHHHHHHCCCCEEEECCC----------
Q ss_conf             620668887348904559999987------------------------0999879763038324665599----------
Q gi|254781019|r    2 AIGIEDISFYTTNQYLDLSVIAEK------------------------YRLDVAKFYVGIGQERMSVLNP----------   47 (396)
Q Consensus         2 ~vGI~~i~~y~P~~~v~~~~l~~~------------------------~g~~~~k~~~~lGi~~r~v~~~----------   47 (396)
                      ||.|.++|.|+|+++|+|+||.+.                        ...+.+||.+++||++|+++..          
T Consensus         2 n~~I~g~G~y~P~~vvtN~dl~~~~~~~~~~~~~~~~~~~~~~~~e~~vdtsdeWI~~rtGI~~R~i~~~~g~~~~~~~~   81 (372)
T PRK07515          2 NVVISGTGLYTPPESISNEELVESFNAYVDQFNAENAAAIEAGEVEALPPSSSEFIEKASGIKSRYVMEKEGILDPERMR   81 (372)
T ss_pred             CCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCEEEEEEECCCCCCCCHHCC
T ss_conf             61999978877995104899998776555442000033321343102556756776642464677752356766600014


Q ss_pred             --------CC--CHHHHHHHHHHHHHHHCC--HHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHH
Q ss_conf             --------85--999999999999997279--578689999457887546005888863202687735898414203588
Q gi|254781019|r   48 --------DE--DIVTMAAAAALPIMQNQD--KNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSAT  115 (396)
Q Consensus        48 --------~E--d~~tmA~~Aa~~~L~~~~--~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~  115 (396)
                              +|  ++.+||++|+++||++++  |+|||+||++|+||++..|++|+.||++||+.  ..+||++.||+||+
T Consensus        82 p~~~~~~~d~~~~~sdma~~AA~~AL~~Agi~~~dIDlIIvaT~tpd~~~PstA~~vq~~LG~~--~~afDi~aaCsGfv  159 (372)
T PRK07515         82 PRIPERSNDELSIQAEMGVAAARQALERAGKTAADIDGVIVACSNMQRAYPAMAIEIQEALGIE--GFAFDMNVACSSAT  159 (372)
T ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCCCCCCCCCHHHHHHHHHCCC--CEEHHHHCCCHHHH
T ss_conf             3333456643113799999999999998499989999999976888888972999999984898--42043614086899


Q ss_pred             HHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCC---CCCCCEEEEEECCCCCCC-----EEEEC--CCCCCCCC---
Q ss_conf             899878999973999769995033201458887533---478302468842687630-----35310--00156786---
Q gi|254781019|r  116 CALHMACALVAKSPERKVLIVASDVARYDLGSSGEP---TQGCGAVAILISSQTSIL-----EIEDI--TGIYTNDC---  182 (396)
Q Consensus       116 ~AL~~A~~~i~sg~~~~aLVV~sD~~~~~~~~~~~~---t~GaGA~Allv~~~~~~~-----~~~~~--~~~~~~~~---  182 (396)
                      +||.+|.++|++|..+++|||++|..+..++..++.   .+||||.|+++++.+...     .+...  ...+....   
T Consensus       160 yaL~~A~~~I~sg~~k~vLVVgaE~~S~~~d~~DR~t~~LFGDGAgAvvle~~~~~~~~~~~~il~~~~~t~~s~~i~~~  239 (372)
T PRK07515        160 FGIQTAANAIRSGSARRVLVVNPEICSGHLNFRDRDSHFIFGDVATAVIVERADTATSAGGFEILSTRLFTQFSNNIRNN  239 (372)
T ss_pred             HHHHHHHHHHHCCCCCEEEEECCHHHCCCCCCCCCCCEEEECCCCEEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCC
T ss_conf             99999999997189874799534230336276787704776165302466411468887774156656346656664457


Q ss_pred             CCCC-------CCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCCHHHHHHHHHHCC-HHHHH
Q ss_conf             5112-------758875423566016989999999999999996298821101233114540578888864110-24544
Q gi|254781019|r  183 MDFW-------RPNYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHDFNDFQYFCYHQPFTRMAEKAHIRLSK-IVHQN  254 (396)
Q Consensus       183 ~df~-------rp~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~~did~~v~H~p~~k~~~~~~~~l~~-~~~~~  254 (396)
                      ..+.       .+....+..|+|+.+++..++.+++.++++++++|++++|||+|++||+|.+|++...+++.. .... 
T Consensus       240 ~g~~~~~~~~~~~~~~~~~~m~G~~Vfk~av~~~~~~i~~~L~~~gl~~~DId~~v~HQAN~rii~~i~k~llg~~~~~-  318 (372)
T PRK07515        240 FGFLNRAEPEGAGDADKLFVQEGRKVFKEVCPMVAEHIVEHLAENGLTPADVKRLWLHQANINMNQLIGKKVLGRDATP-  318 (372)
T ss_pred             CCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCEEEECCCCHHHHHHHHHHHCCCCCCH-
T ss_conf             8866767767887633111441789999999999999999999829898889999867789999999999854589998-


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCC
Q ss_conf             1001345554333444532385432338999999997157436988899984079830
Q gi|254781019|r  255 LSVAEIEKAIGITTLYNRLIGNSYTASLYIALISLLDHSSENLAGKRVGFFSYGSGCV  312 (396)
Q Consensus       255 ~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~slLe~~~~~~~G~rIll~syGsG~~  312 (396)
                            ++.    .....++|||+|||||++|..   ..+++++||+|+|++||+|+.
T Consensus       319 ------~k~----~~~i~~yGNTssASiplaL~~---~~~~ik~Gd~vll~gfGaGlt  363 (372)
T PRK07515        319 ------EEA----PVILDEYANTSSAGSIIAFHK---HSDDLAAGDLGVICSFGAGYS  363 (372)
T ss_pred             ------HHH----EEHHHHCCCHHHHHHHHHHHH---HHCCCCCCCEEEEEEEEHHHH
T ss_conf             ------883----220741184788899999999---848678999899999877985


No 15 
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=100.00  E-value=0  Score=384.05  Aligned_cols=294  Identities=18%  Similarity=0.149  Sum_probs=243.5

Q ss_pred             CEEEEEEEECCCEEECHHHHHHHCCCCHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCC--HHHCCEEEEECCC
Q ss_conf             20668887348904559999987099987976303832466559985999999999999997279--5786899994578
Q gi|254781019|r    3 IGIEDISFYTTNQYLDLSVIAEKYRLDVAKFYVGIGQERMSVLNPDEDIVTMAAAAALPIMQNQD--KNLIDTLFFATES   80 (396)
Q Consensus         3 vGI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~~lGi~~r~v~~~~Ed~~tmA~~Aa~~~L~~~~--~~~Id~li~~T~t   80 (396)
                      -.|.++|.|+|+++|+|+||++..|++++||.+++||++|+++.++|++.+||++|+++||++++  |+|||+||++|+|
T Consensus         5 ~rI~g~G~ylP~~~v~n~el~~~~~~~~~~i~~~tGI~~R~~~~~~e~~~~ma~~Aa~~aL~~agi~~~dIdllI~~t~t   84 (327)
T PRK05963          5 SRIAGFGHAVPDRRVENAEIEAQLGLETGWIERRTGIRCRRWAMPDETLSHLAASAADMALADAGIERSDIALTLLATST   84 (327)
T ss_pred             CEEEEEEEECCCCEECHHHHHHHHCCCHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEEEC
T ss_conf             77999999679937839999988299979977536933799889999999999999999999759898998799998607


Q ss_pred             CCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCC---CCCCCCE
Q ss_conf             8754600588886320268773589841420358889987899997399976999503320145888753---3478302
Q gi|254781019|r   81 SVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACALVAKSPERKVLIVASDVARYDLGSSGE---PTQGCGA  157 (396)
Q Consensus        81 ~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~~~~~~~---~t~GaGA  157 (396)
                      +++..|++|++||++||++ +|.+||++++|.||++||++|..+++++. +++|||++|..+...+..++   +.+||||
T Consensus        85 ~d~~~P~~A~~v~~~LGl~-~~~~fDi~~aC~g~~~al~~A~~~i~~~~-~~vLvv~~e~~S~~~~~~d~~~~~lfgDgA  162 (327)
T PRK05963         85 PDHLLPPTAPLLAHWLGLQ-NSGAADLAGACTGFLYALVLADGFVRAQG-KPVLVVAANILSRRINMAERASAVLFADAA  162 (327)
T ss_pred             CCCCCCCHHHHHHHHHCCC-CCEEEEHHHHHHHHHHHHHHHHHHHHHCC-CEEEEEEEHHHCCCCCCHHHHHHHHCCCCC
T ss_conf             9998970999999985778-61143597668999999999999997348-637996410210358801233432304700


Q ss_pred             EEEEECCCCCCC--EEEECCCCCCCCC-------CCCCCCCCC-------CCEEECCHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             468842687630--3531000156786-------511275887-------542356601698999999999999999629
Q gi|254781019|r  158 VAILISSQTSIL--EIEDITGIYTNDC-------MDFWRPNYR-------RTALVDGKYSTKIYLQSLEAVWHDYQKNKG  221 (396)
Q Consensus       158 ~Allv~~~~~~~--~~~~~~~~~~~~~-------~df~rp~~~-------~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g  221 (396)
                      +|+++++.+...  .+.....+.....       ....+|...       .....+|+..++..++.+++++++.+++.|
T Consensus       163 ~A~vl~~~~~~~~g~l~~~~~td~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~L~~~g  242 (327)
T PRK05963        163 GAVVLAPSAKANSGVLGSQLISDGSHYDLIQIPAGGSARPYAPERDASEFLMTMQDGRAVFTEAVRMMTGASQNVLASAA  242 (327)
T ss_pred             CEEEEECCCCCCCCEEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             06898415788874466898643787663885579867888876666655247517499999999852999999999849


Q ss_pred             CCHHHCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCE
Q ss_conf             88211012331145405788888641102454410013455543334445323854323389999999971574369888
Q gi|254781019|r  222 HDFNDFQYFCYHQPFTRMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALISLLDHSSENLAGKR  301 (396)
Q Consensus       222 ~~~~did~~v~H~p~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~slLe~~~~~~~G~r  301 (396)
                      ++++|||+|++||++.++.+...+++....++-             .....++|||+|||||++|..+++ .+++++||+
T Consensus       243 l~~~dId~~v~HQ~n~~~~~~v~~~lgl~~ek~-------------~~~~~~~GNt~sAsipiaL~~a~~-~g~l~~Gd~  308 (327)
T PRK05963        243 MLPQDIDRFFPHQANARIVDKVCETLGIPRAKA-------------ASTIETYGNSSAATIPLSLSLANL-EQPLREGER  308 (327)
T ss_pred             CCHHHCCEEEECCCCHHHHHHHHHHCCCCHHHH-------------HHHHHHHCCHHHHHHHHHHHHHHH-CCCCCCCCE
T ss_conf             982228889986799899999999829797870-------------302751392488899999999998-299999799


Q ss_pred             EEEEEECCCCC
Q ss_conf             99984079830
Q gi|254781019|r  302 VGFFSYGSGCV  312 (396)
Q Consensus       302 Ill~syGsG~~  312 (396)
                      |+|+|||+|+.
T Consensus       309 vll~g~G~G~s  319 (327)
T PRK05963        309 LLFAAAGAGMT  319 (327)
T ss_pred             EEEEEEEHHHH
T ss_conf             99999866863


No 16 
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=100.00  E-value=0  Score=382.73  Aligned_cols=296  Identities=19%  Similarity=0.216  Sum_probs=249.1

Q ss_pred             CCEEEEEEEECCCEEECHHHHHHHCCCCHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHC--CHHHCCEEEEECC
Q ss_conf             62066888734890455999998709998797630383246655998599999999999999727--9578689999457
Q gi|254781019|r    2 AIGIEDISFYTTNQYLDLSVIAEKYRLDVAKFYVGIGQERMSVLNPDEDIVTMAAAAALPIMQNQ--DKNLIDTLFFATE   79 (396)
Q Consensus         2 ~vGI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~~lGi~~r~v~~~~Ed~~tmA~~Aa~~~L~~~--~~~~Id~li~~T~   79 (396)
                      ++.|.++|.|+|+++++++++++..|++++|+.+.+||++|++++++|++.+||++|+++||+++  +|++||+||++|+
T Consensus         1 ~~~I~~~g~y~P~~~v~n~~~~~~~g~~~~~i~~~~Gi~~R~~a~~~e~~~~ma~~Aa~~aL~~ag~~~~dIdlli~~s~   80 (320)
T cd00830           1 NARILGIGSYLPERVVTNDELEKRLDTSDEWIRTRTGIRERRIADPGETTSDLAVEAAKKALEDAGIDADDIDLIIVATS   80 (320)
T ss_pred             CCEEEEEEEECCCCEECHHHHHHHHCCCHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECC
T ss_conf             97899999977993784999998869898999870297489988999999999999999999866989567888999415


Q ss_pred             CCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCC---CCCCCC
Q ss_conf             88754600588886320268773589841420358889987899997399976999503320145888753---347830
Q gi|254781019|r   80 SSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACALVAKSPERKVLIVASDVARYDLGSSGE---PTQGCG  156 (396)
Q Consensus        80 t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~~~~~~~---~t~GaG  156 (396)
                      |+++..|+++++||++||++ +|.+||++++|+|+++||++|..++++|+.+++|||++|..+...+..++   +.+|||
T Consensus        81 ~~~~~~P~~a~~v~~~LGl~-~~~~fdi~~~C~g~~~aL~~A~~~i~~g~~~~~Lvv~~e~~s~~~~~~~~~~~~lfGDg  159 (320)
T cd00830          81 TPDYLFPATACLVQARLGAK-NAAAFDINAACSGFLYGLSTAAGLIRSGGAKNVLVVGAETLSRILDWTDRSTAVLFGDG  159 (320)
T ss_pred             CCCCCCCCHHHHHHHHHCCC-CCCEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECHHHCCCCCCCCCCHHHCCCCC
T ss_conf             68986883999999996889-97225104551158999999999985598761699841342255454662111103786


Q ss_pred             EEEEEECCCCCCCEEE-ECCCCCCCCCCCCC-------------CCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             2468842687630353-10001567865112-------------758875423566016989999999999999996298
Q gi|254781019|r  157 AVAILISSQTSILEIE-DITGIYTNDCMDFW-------------RPNYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGH  222 (396)
Q Consensus       157 A~Allv~~~~~~~~~~-~~~~~~~~~~~df~-------------rp~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~  222 (396)
                      |+|+++++.+....+. ....+... ..+.+             ......+..++|+..+....+.+++++++++++.|+
T Consensus       160 aaA~ll~~~~~~~~i~~~~~~t~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~~~L~~~g~  238 (320)
T cd00830         160 AGAVVLEATEEDPGILDSVLGSDGS-GADLLTIPAGGSRSPFEDAEGGDPYLVMDGREVFKFAVRLMPESIEEALEKAGL  238 (320)
T ss_pred             CEEEEEEECCCCCCEEEEEEEEECC-CCCEEEECCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             3489996248888424689997068-865268458976677643335676179732899998876569999999998599


Q ss_pred             CHHHCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEE
Q ss_conf             82110123311454057888886411024544100134555433344453238543233899999999715743698889
Q gi|254781019|r  223 DFNDFQYFCYHQPFTRMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALISLLDHSSENLAGKRV  302 (396)
Q Consensus       223 ~~~did~~v~H~p~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~slLe~~~~~~~G~rI  302 (396)
                      +++|||||++||++.++.+....++....++.          .   ...+++|||+|+|+|++|..+++ .+++++||+|
T Consensus       239 ~~~did~~v~Hq~~~~~~~~~~~~lgi~~~k~----------~---~~~~~~GN~~sasi~~~L~~~~~-~g~l~~Gd~v  304 (320)
T cd00830         239 TPDDIDWFVPHQANLRIIEAVAKRLGLPEEKV----------V---VNLDRYGNTSAASIPLALDEAIE-EGKLKKGDLV  304 (320)
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHCCCHHHH----------H---HHHHHCCCHHHHHHHHHHHHHHH-CCCCCCCCEE
T ss_conf             91016579970687899999999809698996----------7---56851075587689999999997-4999985999


Q ss_pred             EEEEECCCCCE
Q ss_conf             99840798303
Q gi|254781019|r  303 GFFSYGSGCVA  313 (396)
Q Consensus       303 ll~syGsG~~a  313 (396)
                      +++|||+|+..
T Consensus       305 ll~~~G~G~s~  315 (320)
T cd00830         305 LLLGFGAGLTW  315 (320)
T ss_pred             EEEEECHHHHH
T ss_conf             99998045325


No 17 
>PRK06840 hypothetical protein; Validated
Probab=100.00  E-value=0  Score=378.77  Aligned_cols=296  Identities=18%  Similarity=0.153  Sum_probs=235.1

Q ss_pred             CCCEEEEEEEECCCEEECHHHHHHHCCCCHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCC--HHHCCEEE-EE
Q ss_conf             9620668887348904559999987099987976303832466559985999999999999997279--57868999-94
Q gi|254781019|r    1 MAIGIEDISFYTTNQYLDLSVIAEKYRLDVAKFYVGIGQERMSVLNPDEDIVTMAAAAALPIMQNQD--KNLIDTLF-FA   77 (396)
Q Consensus         1 M~vGI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~~lGi~~r~v~~~~Ed~~tmA~~Aa~~~L~~~~--~~~Id~li-~~   77 (396)
                      |+|+|.++|.|+|+++|+|+||++..|++++||.+++||++|++++++|++.+||++|+++||++++  |++||+|| ++
T Consensus         3 ~~v~I~~~G~ylP~~~v~n~e~~~~~~~~~e~i~~rtGI~~Rr~a~~~e~~~dma~~Aa~~aL~~ag~~~~dIdliI~~~   82 (337)
T PRK06840          3 MNVGIVSTGVYLPKDVMTAEEIAKKTGIPEEVIIEKFGILEKPIPGPEDHTSDMAIAAAKPALKQAGIDPEAIDLVIYIG   82 (337)
T ss_pred             CCEEEEEEEEECCCCEECHHHHHHHCCCCHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEE
T ss_conf             51099999997899736699999873998799854658616857899998999999999999997498967887899993


Q ss_pred             CCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCC-CCEEEEEECCCCCCCCCCC-----CCC
Q ss_conf             5788754600588886320268773589841420358889987899997399-9769995033201458887-----533
Q gi|254781019|r   78 TESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACALVAKSP-ERKVLIVASDVARYDLGSS-----GEP  151 (396)
Q Consensus        78 T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i~sg~-~~~aLVV~sD~~~~~~~~~-----~~~  151 (396)
                      |.++++..|++|++||++||+ +++.+||++++|+||++||++|.+++.+++ .+++|||++|..+..++..     ..+
T Consensus        83 t~~~d~~~ps~A~~vq~~LG~-~~a~afDi~~aC~gf~~aL~~A~~~l~a~~~~~~vLvv~~e~~s~~i~~~~~~~~~~f  161 (337)
T PRK06840         83 EEHKDYPVWTAAPKIQHEIGA-KNAWAFDIMARCGTFPVALKVAKDLMLADPNINNVLLVGGYRNSDLVDYDNPRSRFMF  161 (337)
T ss_pred             CCCCCCCCCHHHHHHHHHHCC-CCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCEEEE
T ss_conf             689897884199999998589-9960787133201799999999999871655314786014324655566898851699


Q ss_pred             CCCCCEEEEEECCCCCCCEEEE-CCCCCCCCCCCCC--------CCCC-------CCCEEECCHHH-----HHHHHHHHH
Q ss_conf             4783024688426876303531-0001567865112--------7588-------75423566016-----989999999
Q gi|254781019|r  152 TQGCGAVAILISSQTSILEIED-ITGIYTNDCMDFW--------RPNY-------RRTALVDGKYS-----TKIYLQSLE  210 (396)
Q Consensus       152 t~GaGA~Allv~~~~~~~~~~~-~~~~~~~~~~df~--------rp~~-------~~~~~~dg~~~-----~~~y~~~~~  210 (396)
                      ++||||+|+++++++....+.. ...+... .++.+        .|..       ..+..+.+...     ....++.+.
T Consensus       162 ~~GDga~A~ll~~~~~~~~il~~~~~tdg~-~~~~~~~~~gg~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  240 (337)
T PRK06840        162 NLGAGGSAALLKKNYGKNRVLGSAIITDGS-FSEDVRVPAGGTKQPASYETVDNRQHYLDVLDPESMKERLDPVSIPNFY  240 (337)
T ss_pred             EECCCCEEEEEECCCCCCCEEEEEECCCCC-CHHCEEEECCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHH
T ss_conf             705883479984168887057666212575-3121687138756888744534542158631038888776889998899


Q ss_pred             HHHHHHHHHCCCCHHHCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
Q ss_conf             99999999629882110123311454057888886411024544100134555433344453238543233899999999
Q gi|254781019|r  211 AVWHDYQKNKGHDFNDFQYFCYHQPFTRMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALISLL  290 (396)
Q Consensus       211 ~a~~~~l~~~g~~~~did~~v~H~p~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~slL  290 (396)
                      +++++.++++|++++|||+|++||++.++.+....++....++          +   . +..++|||+++|+|++|..++
T Consensus       241 ~~i~~~L~~~gl~~~DId~~~~hq~~~~~~~~~~~~lgi~~~k----------~---~-~~~~~GNt~sasiplaL~~a~  306 (337)
T PRK06840        241 KVIREALRKSGYTPKDIDYLAILHMKRSAHIAVLEGLGLTEEQ----------T---I-YLEEYGHMGQIDQILSLHLAL  306 (337)
T ss_pred             HHHHHHHHHCCCCHHHCCEEEECCCCHHHHHHHHHHHCCCHHH----------E---E-ECCCCCCHHHHHHHHHHHHHH
T ss_conf             9999999984999578688888533799999999982997543----------4---8-602677317778999999999


Q ss_pred             HHCCCCCCCCEEEEEEECCCCCE
Q ss_conf             71574369888999840798303
Q gi|254781019|r  291 DHSSENLAGKRVGFFSYGSGCVA  313 (396)
Q Consensus       291 e~~~~~~~G~rIll~syGsG~~a  313 (396)
                      + .+++++||+|+|+|||+|+..
T Consensus       307 ~-~g~l~~Gd~vll~g~G~G~s~  328 (337)
T PRK06840        307 E-QGKLKDGDLVVLVSAGTGYTW  328 (337)
T ss_pred             H-CCCCCCCCEEEEEEEEHHHHH
T ss_conf             8-099999599999999945212


No 18 
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00  E-value=0  Score=376.73  Aligned_cols=293  Identities=19%  Similarity=0.197  Sum_probs=233.2

Q ss_pred             CCEEEEEEEECCCEEECHHHHHHHCCCCH----HHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCC--HHHCCEEE
Q ss_conf             62066888734890455999998709998----7976303832466559985999999999999997279--57868999
Q gi|254781019|r    2 AIGIEDISFYTTNQYLDLSVIAEKYRLDV----AKFYVGIGQERMSVLNPDEDIVTMAAAAALPIMQNQD--KNLIDTLF   75 (396)
Q Consensus         2 ~vGI~~i~~y~P~~~v~~~~l~~~~g~~~----~k~~~~lGi~~r~v~~~~Ed~~tmA~~Aa~~~L~~~~--~~~Id~li   75 (396)
                      ++.|.++|+|+|+++|+++++.+....+.    +|+.+.+||++|++++++|.+.+||+.|+++||++++  +++||+||
T Consensus         7 ~akI~G~g~~vP~~~v~n~d~~~~~~~~d~~~~~~~~~~tGI~~R~~a~~~~~~sdla~~AA~~AL~~a~i~~~dID~II   86 (353)
T PRK12880          7 KAKISGICVSVPEHKICIDDELESVFSNDIKTLKRMKKVIGLNTRYICDENTCVSDLGKHAANTLLQGLNIDKNSLDALI   86 (353)
T ss_pred             CCEEEEEEEECCCCEECCHHHHHHHCCCCHHHHEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEE
T ss_conf             40899999977997641479887653874677633424558454778799986999999999999997599988999999


Q ss_pred             EECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCC---C
Q ss_conf             9457887546005888863202687735898414203588899878999973999769995033201458887533---4
Q gi|254781019|r   76 FATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACALVAKSPERKVLIVASDVARYDLGSSGEP---T  152 (396)
Q Consensus        76 ~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~~~~~~~~---t  152 (396)
                      ++|+||++..|++|++||++||+..+|.+||+++||+||++||.+|..+|++|.. ++|||++|..+..++..++-   .
T Consensus        87 ~aT~tpD~~~PstA~~vq~~LGl~~~~~AfDI~~aCsGfvyaL~~A~~~I~sg~~-kvLlV~~e~~S~~id~~dr~t~~L  165 (353)
T PRK12880         87 VVTQSPDFFMPSTACYLHQLLNLSSKTIAFDLGQACAGYLYGLFVAHSLIQSGLG-KILLICGDTLSKFIHPKNMNLAPI  165 (353)
T ss_pred             EECCCCCCCCCCHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCC-CEEEEECHHHCCCCCHHHCCEEEE
T ss_conf             9737889088847899999809998850887454434699999999999981987-489992267536778220551032


Q ss_pred             CCCCEEEEEECCCCCCCE-EEE-CCCCC-----------CCCCCCCCCCC---------CCCCEEECCHHHHHHHHHHHH
Q ss_conf             783024688426876303-531-00015-----------67865112758---------875423566016989999999
Q gi|254781019|r  153 QGCGAVAILISSQTSILE-IED-ITGIY-----------TNDCMDFWRPN---------YRRTALVDGKYSTKIYLQSLE  210 (396)
Q Consensus       153 ~GaGA~Allv~~~~~~~~-~~~-~~~~~-----------~~~~~df~rp~---------~~~~~~~dg~~~~~~y~~~~~  210 (396)
                      +||||+|+++++.+.... +.. .-|.+           .....+.+.+.         ..+..+|||+.+++..++.++
T Consensus       166 FGDgAgA~vl~~~~~~~~~~~l~sdG~~~d~l~i~~gg~~~p~~~~~~~~~~~~~~~~~~~~~l~MdG~~Vf~~av~~vp  245 (353)
T PRK12880        166 FGDGVSATLIEKTDFNEAFFELGSDGKYFDKLIIPKGAMRIPKADIFNDDSLMQTEEFRQLENLYMDGANIFNMALECEP  245 (353)
T ss_pred             ECCCCEEEEEECCCCCCCEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHH
T ss_conf             05774368873046786428980488887737846886558775555775322443345555334365899999999999


Q ss_pred             HHHHHHHHHCCCCHHHCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
Q ss_conf             99999999629882110123311454057888886411024544100134555433344453238543233899999999
Q gi|254781019|r  211 AVWHDYQKNKGHDFNDFQYFCYHQPFTRMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALISLL  290 (396)
Q Consensus       211 ~a~~~~l~~~g~~~~did~~v~H~p~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~slL  290 (396)
                      +.++++++++|++.+|||+|++||+|.+|++...+++....++-..            ....++|||++||||++|..+.
T Consensus       246 ~~i~~~L~~agl~~~DId~~v~HQAN~riie~i~k~Lgl~~ek~~~------------~~~~~yGNTssASIPiaL~e~~  313 (353)
T PRK12880        246 KSFKEILEFSKVDEKDIAFHLFHQSNAYLVDCIKEELKLNDDKVPN------------FIMEKYANLSACSLPALLCELD  313 (353)
T ss_pred             HHHHHHHHHCCCCHHHCCEEEECCCCHHHHHHHHHHCCCCHHHHHH------------HHHHHHCCHHHHHHHHHHHHHH
T ss_conf             9999999983999788656865468899999999980989787030------------0555339589999999999998


Q ss_pred             HHCCCCCCCCEEEEEEECCCCC
Q ss_conf             7157436988899984079830
Q gi|254781019|r  291 DHSSENLAGKRVGFFSYGSGCV  312 (396)
Q Consensus       291 e~~~~~~~G~rIll~syGsG~~  312 (396)
                      + .++    .|++|++||.|+.
T Consensus       314 ~-~~~----~k~~L~gFGaGlt  330 (353)
T PRK12880        314 T-PKE----FKASLSAFGAGLS  330 (353)
T ss_pred             H-CCC----CEEEEEEEEHHHH
T ss_conf             7-499----8446999835741


No 19 
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=100.00  E-value=0  Score=366.50  Aligned_cols=300  Identities=37%  Similarity=0.480  Sum_probs=237.6

Q ss_pred             CCEEEEEEEECCCEEECHHHHHHHCCCCHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHC--CHHHCCEEEEECC
Q ss_conf             62066888734890455999998709998797630383246655998599999999999999727--9578689999457
Q gi|254781019|r    2 AIGIEDISFYTTNQYLDLSVIAEKYRLDVAKFYVGIGQERMSVLNPDEDIVTMAAAAALPIMQNQ--DKNLIDTLFFATE   79 (396)
Q Consensus         2 ~vGI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~~lGi~~r~v~~~~Ed~~tmA~~Aa~~~L~~~--~~~~Id~li~~T~   79 (396)
                      +|||.++|.|+|+.+++++++++.++.+  ++.+.+||++|+++.++|++.+||++|+++||+++  +|++||+||++|+
T Consensus         1 ~v~I~~~g~y~P~~~v~~~~~~~~~~~~--~~~~~~Gi~~r~~a~~~e~~~~ma~~Aa~~aL~~a~~~~~~Idlli~~s~   78 (324)
T cd00827           1 DVGIEAIGAYLPRYRVDNEELAEGLGVD--PGKYTTGIGQRHMAGDDEDVPTMAVEAARRALERAGIDPDDIGLLIVATE   78 (324)
T ss_pred             CCCEEEEEEECCCCEECHHHHHHHHCCH--HHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEECC
T ss_conf             9368799997899479599999884952--76502470389967999999999999999999984989889979999325


Q ss_pred             CCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCC--CCCCCCCCCCCE
Q ss_conf             887546005888863202687735898414203588899878999973999769995033201458--887533478302
Q gi|254781019|r   80 SSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACALVAKSPERKVLIVASDVARYDL--GSSGEPTQGCGA  157 (396)
Q Consensus        80 t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~~--~~~~~~t~GaGA  157 (396)
                      |+++..|++|++||++||+. ++.+||++++|+|+++||++|.+|+++|+.+++|||++|+.++..  ++..++++||||
T Consensus        79 ~~~~~~p~~a~~i~~~Lgl~-~~~~~di~~~C~g~~~aL~~A~~~l~~g~~~~~LVv~~e~~s~~~~~~~~~~~~~GDgA  157 (324)
T cd00827          79 SPIDKGKSAATYLAELLGLT-NAEAFDLKQACYGGTAALQLAANLVESGPWRYALVVASDIASYLLDEGSALEPTLGDGA  157 (324)
T ss_pred             CCCCCCCCHHHHHHHHHCCC-CCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECHHCCCCCCCCCCCCCCCCCC
T ss_conf             77867974999999985899-97188601422047999999998875487651478740110124677987664457722


Q ss_pred             EEEEECCCCCCCEEEECCCCCCCC---------CCCCCCCCCCCCE---E----ECCHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             468842687630353100015678---------6511275887542---3----56601698999999999999999629
Q gi|254781019|r  158 VAILISSQTSILEIEDITGIYTND---------CMDFWRPNYRRTA---L----VDGKYSTKIYLQSLEAVWHDYQKNKG  221 (396)
Q Consensus       158 ~Allv~~~~~~~~~~~~~~~~~~~---------~~df~rp~~~~~~---~----~dg~~~~~~y~~~~~~a~~~~l~~~g  221 (396)
                      +|+++++++..............+         ..+...+......   .    ..+......+.+.+.+++++.+++.+
T Consensus       158 aA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  237 (324)
T cd00827         158 AAMLVSRNPGILAAGIVSTHSTSDPGYDFSPYPVMDGGYPKPCKLAYAIRLTAEPAGRAVFEAAHKLIAKVVRKALDRAG  237 (324)
T ss_pred             EEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             89998227865555403677501566544444567888777543210022224441789999999999999999999849


Q ss_pred             CCHHHCCEEEECCCCCH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHH-HHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCC
Q ss_conf             88211012331145405-78888864110245441001345554333-44453238543233899999999715743698
Q gi|254781019|r  222 HDFNDFQYFCYHQPFTR-MAEKAHIRLSKIVHQNLSVAEIEKAIGIT-TLYNRLIGNSYTASLYIALISLLDHSSENLAG  299 (396)
Q Consensus       222 ~~~~did~~v~H~p~~k-~~~~~~~~l~~~~~~~~~~~~~e~~~~~~-~~~~~~~GN~~SASi~l~L~slLe~~~~~~~G  299 (396)
                      ++ +|++++++||++.+ +.+....++.....+          +..+ ..+.+++|||+|||+|++|..+++ .+++++|
T Consensus       238 ~~-~~~~~~~~hq~~~~~i~~~~~~~l~~~~~~----------~~~~~~~~~~~~Gn~~sasi~~~L~~~l~-~g~l~~G  305 (324)
T cd00827         238 LS-EDIDYFVPHQPNGKKILEAVAKKLGGPPEK----------ASQTRWILLRRVGNMYAASILLGLASLLE-SGKLKAG  305 (324)
T ss_pred             CC-HHHHHEEECCCCHHHHHHHHHHHCCCCHHH----------CCCCHHHHCCCCCCHHHHHHHHHHHHHHH-CCCCCCC
T ss_conf             97-544124325763789999999983996565----------13516465168414489899999999997-2999984


Q ss_pred             CEEEEEEECCCCCEEEE
Q ss_conf             88999840798303778
Q gi|254781019|r  300 KRVGFFSYGSGCVAEFF  316 (396)
Q Consensus       300 ~rIll~syGsG~~a~~f  316 (396)
                      |+|++++||+|+....+
T Consensus       306 d~vll~~~G~G~s~~~~  322 (324)
T cd00827         306 DRVLLFSYGSGFTAEAF  322 (324)
T ss_pred             CEEEEEEECHHHHHHHE
T ss_conf             99999999068315511


No 20 
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative; InterPro: IPR004656   This family of archaeal proteins shows considerable homology and identical active site residues to FabH, the beta-ketoacyl-acyl carrier protein synthase III of bacteria and plants. The archaeal species in which it is found, however, do not have a readily detectable homolog of acyl carrier protein itself, suggesting the condensation of the acyl group with some other carrier. In Methanococcus jannaschii, Q58941 from SWISSPROT, Cys-112 is the site of acyl group attachment and His-234 and Asn-237 are also active site residues by homology to FabH.   Closely related bacterial families include a polyketide antibiotic (2,4-diacetylphloroglucinol) biosynthesis protein from Pseudomonas fluorescens and an uncharacterised protein from Staphylococcus carnosus. .
Probab=100.00  E-value=0  Score=371.28  Aligned_cols=339  Identities=24%  Similarity=0.331  Sum_probs=310.4

Q ss_pred             CCEEEEEEEECCCEEECHHHHHHHCCCCHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHC--CHHHCCEEEEECC
Q ss_conf             62066888734890455999998709998797630383246655998599999999999999727--9578689999457
Q gi|254781019|r    2 AIGIEDISFYTTNQYLDLSVIAEKYRLDVAKFYVGIGQERMSVLNPDEDIVTMAAAAALPIMQNQ--DKNLIDTLFFATE   79 (396)
Q Consensus         2 ~vGI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~~lGi~~r~v~~~~Ed~~tmA~~Aa~~~L~~~--~~~~Id~li~~T~   79 (396)
                      .+||.+.|.|+|.+++.++||++.|+.+|..|.+++-+.+++|+..|||++|++++|+|++|.++  ||++|..+.++++
T Consensus         1 ~~GivGyG~y~P~yri~~eei~rvW~~dp~~i~~g~~~~ek~vP~~ded~~ti~~eaarnal~r~~idP~~i~a~~~Gse   80 (347)
T TIGR00748         1 MAGIVGYGAYIPKYRIKVEEIARVWGDDPEAISKGLLVEEKAVPGLDEDTATIAVEAARNALKRAKIDPKDIGAVYVGSE   80 (347)
T ss_pred             CCCEEEECCCCCCEEECHHHHHHHHCCCHHHHHCCEEEEECCCCCCCCCCEEEHHHHHHHHHHHCCCCHHHCCEEEECCC
T ss_conf             94157621011531110234443305663686557025532478866340011146778777630478416417796056


Q ss_pred             CCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEE
Q ss_conf             88754600588886320268773589841420358889987899997399976999503320145888753347830246
Q gi|254781019|r   80 SSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACALVAKSPERKVLIVASDVARYDLGSSGEPTQGCGAVA  159 (396)
Q Consensus        80 t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~~~~~~~~t~GaGA~A  159 (396)
                      |.|+..||++++|.+.++..++..+.|+.++|.+|+.+|+.+..++++|..+++|.|++|++...+++..|+|.++|.+|
T Consensus        81 s~PyavkP~~t~~aea~~atP~l~aad~efaCkaGt~~~q~~~G~v~sG~~ky~la~GadtaqG~PGd~le~ta~aGGaa  160 (347)
T TIGR00748        81 SKPYAVKPTATIVAEAIEATPDLTAADLEFACKAGTAGIQACIGLVESGLIKYGLAIGADTAQGAPGDALEYTAAAGGAA  160 (347)
T ss_pred             CCCCEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCEE
T ss_conf             86510064035554454057574022135555521688998875676446665543124102689863100000378526


Q ss_pred             EEECCCC-CCCEEEECCCCCCCCCCCCCCCCCCCCEEECCHHHHH-HHHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCC
Q ss_conf             8842687-6303531000156786511275887542356601698-9999999999999996298821101233114540
Q gi|254781019|r  160 ILISSQT-SILEIEDITGIYTNDCMDFWRPNYRRTALVDGKYSTK-IYLQSLEAVWHDYQKNKGHDFNDFQYFCYHQPFT  237 (396)
Q Consensus       160 llv~~~~-~~~~~~~~~~~~~~~~~df~rp~~~~~~~~dg~~~~~-~y~~~~~~a~~~~l~~~g~~~~did~~v~H~p~~  237 (396)
                      .+++... ..+.....+.+++.|.+||||..+.+||++.++|.-+ .|.+++-.+.+.++++.|+..+||||.+||||+.
T Consensus       161 ~~iG~~~~~~~a~~~~~ysy~tdtPdf~rr~~~~yPrhG~rftGePayf~hv~~aa~~lm~~~G~~~~d~dy~vfhqPn~  240 (347)
T TIGR00748       161 YIIGEKNSEVVAEFEGTYSYTTDTPDFWRREGKPYPRHGGRFTGEPAYFKHVVTAAKGLMEKLGLKPEDFDYAVFHQPNG  240 (347)
T ss_pred             EEECCCCHHHHHHHHCCEEEEECCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCC
T ss_conf             88607512234311033224206815664067878877875467637899999999999997278823141478755875


Q ss_pred             HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEEE
Q ss_conf             57888886411024544100134555433344453238543233899999999715743698889998407983037787
Q gi|254781019|r  238 RMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALISLLDHSSENLAGKRVGFFSYGSGCVAEFFS  317 (396)
Q Consensus       238 k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~slLe~~~~~~~G~rIll~syGsG~~a~~f~  317 (396)
                      |+..++.+.|....+          ++.+. ++...+|||||+..+++|...|+..   ++|+|||..|||||+.+..|.
T Consensus       241 kf~~~~a~~lG~~~e----------~~~~G-ll~~~iGntysGa~~~G~~~~ld~~---~~G~ril~vs~GsGaGsdaf~  306 (347)
T TIGR00748       241 KFYLKAARILGFKKE----------QVKPG-LLTPVIGNTYSGATPVGLSAVLDVA---EPGERILAVSYGSGAGSDAFS  306 (347)
T ss_pred             CEEEEEHHHHCCCHH----------CEECC-CCCCCCCCCCCCHHHHHHHHHHHCC---CCCCEEEEEEECCCCCCCEEE
T ss_conf             044411234075101----------00001-0123335432331455467775304---788648999606776753367


Q ss_pred             EEEECCHHHHHHCC-CHHHHHHCCCCCCHHHHHHHHHH
Q ss_conf             78602268765203-87889742722389999999863
Q gi|254781019|r  318 GIVQKNYRKKSHQK-RHQHIINSRIPISYQVYCDLHQD  354 (396)
Q Consensus       318 ~~v~~~~~~~~~~~-~~~~~L~~r~~l~~~~y~~~~~~  354 (396)
                      ..|++.+++..... .+...|++|+.++|.-|.++.+.
T Consensus       307 i~v~d~i~~~~~~aP~~~~~~~~~~~~dya~yak~~~k  344 (347)
T TIGR00748       307 IVVQDAIEEKRDLAPKVAEYIKRKKYIDYALYAKFRKK  344 (347)
T ss_pred             EEEHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHH
T ss_conf             77311266554116027999862002456777886420


No 21 
>pfam08540 HMG_CoA_synt_C Hydroxymethylglutaryl-coenzyme A synthase C terminal.
Probab=100.00  E-value=0  Score=355.78  Aligned_cols=218  Identities=30%  Similarity=0.483  Sum_probs=190.1

Q ss_pred             EEECCCCCCCCCCCCCCCC-CCCCEEECCHHHHHHHHHHHHHHHHHHHHHC---------CCCHHHCCEEEECCCCCHHH
Q ss_conf             5310001567865112758-8754235660169899999999999999962---------98821101233114540578
Q gi|254781019|r  171 IEDITGIYTNDCMDFWRPN-YRRTALVDGKYSTKIYLQSLEAVWHDYQKNK---------GHDFNDFQYFCYHQPFTRMA  240 (396)
Q Consensus       171 ~~~~~~~~~~~~~df~rp~-~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~---------g~~~~did~~v~H~p~~k~~  240 (396)
                      ..+.+++|+.|++|||||+ .++||+|||++|++||++++.+|++.+.+|.         +..++|||++|||.||+||+
T Consensus         4 e~glrgs~m~h~YDFyKPd~~SEyP~VDGk~Si~cYl~ALd~cy~~Y~~K~~~~~~~~~~~~~ld~fd~~~FH~Py~Klv   83 (282)
T pfam08540         4 DRGLRGSHMEHAYDFYKPDLTSEYPVVDGKLSLQCYLKALDSCYKNYCKKIEKQTKDGGTKFGLDDFDYVIFHSPYCKLV   83 (282)
T ss_pred             CCCCCEEEEECCEECCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCEEEEECCHHHHH
T ss_conf             68867323001501468898997864472889999999999999999999873002367766376677899857544899


Q ss_pred             HHHHHHHCCHH-------------------------------------HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
Q ss_conf             88886411024-------------------------------------54410013455543334445323854323389
Q gi|254781019|r  241 EKAHIRLSKIV-------------------------------------HQNLSVAEIEKAIGITTLYNRLIGNSYTASLY  283 (396)
Q Consensus       241 ~~~~~~l~~~~-------------------------------------~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~  283 (396)
                      +|++.|+....                                     ........+++++.|++.+++++|||||||+|
T Consensus        84 qKs~arl~~nD~~~~~~~~~~~~~~~~l~~~~~~~~e~s~~dk~~ek~~~~~sk~~f~~kv~psl~~~~~vGNmYTaSlY  163 (282)
T pfam08540        84 QKSLARLLYNDFLRNPSSDKGNGVYEKLEALGGLKLEDSYTDRDLEKAFMQLSKPLFKKKTKPSLLLPTQVGNMYTASLY  163 (282)
T ss_pred             HHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHH
T ss_conf             99999999876530655201100011110001464454010068999999870898986326187887860750069999


Q ss_pred             HHHHHHHHHCC-CCCCCCEEEEEEECCCCCEEEEEEEEECCHH-------HHHHCCCHHHHHHCCCCCCHHHHHHHHH--
Q ss_conf             99999997157-4369888999840798303778778602268-------7652038788974272238999999986--
Q gi|254781019|r  284 IALISLLDHSS-ENLAGKRVGFFSYGSGCVAEFFSGIVQKNYR-------KKSHQKRHQHIINSRIPISYQVYCDLHQ--  353 (396)
Q Consensus       284 l~L~slLe~~~-~~~~G~rIll~syGsG~~a~~f~~~v~~~~~-------~~~~~~~~~~~L~~r~~l~~~~y~~~~~--  353 (396)
                      ++|+|+|.+.+ ..+.|+||+||||||||+|+|||++|+++..       .+....++..+|++|+.+++++|+++++  
T Consensus       164 ~~L~SLL~~~~~~~L~GkRIg~FSYGSGlaas~FS~~v~~d~~~~~~l~~~i~~~~~l~~rL~~R~~~~Pe~f~~~~~lr  243 (282)
T pfam08540       164 AALASLLSHVSADELAGKRIGMFSYGSGLAASLFSLRVSQDVSPGSILQKLITKVLDLKNKLDSRHCVSPEEFEETMELR  243 (282)
T ss_pred             HHHHHHHHCCCCCCCCCCEEEEEECCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
T ss_conf             99999984377523489989998516661124675898588676641788999876179998568547978999999999


Q ss_pred             ---HCCCCCCCCCCCCCCCCCCEEEEEEEC-CEEEEEEE
Q ss_conf             ---306888876316667888669835655-38998861
Q gi|254781019|r  354 ---DIIPSVEGNCTIPHTTTGPFRLATIQN-HKRIYETT  388 (396)
Q Consensus       354 ---~~~~~~~~~~~~~~~~~~~~~l~~i~~-~~R~Y~~~  388 (396)
                         +...++.|.++++.+.||+|||++||+ |||+|+++
T Consensus       244 e~~~~~~~~~p~~s~~~l~pGtyYL~~VD~~~RR~Y~~k  282 (282)
T pfam08540       244 EQAHHKKNFTPQGSIDSLFPGTYYLTNVDSLYRRSYARK  282 (282)
T ss_pred             HHHCCCCCCCCCCCCCCCCCCCEECCCCHHHHHCCCCCC
T ss_conf             997078998778970227998864011024332021469


No 22 
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=100.00  E-value=0  Score=332.91  Aligned_cols=301  Identities=20%  Similarity=0.234  Sum_probs=231.2

Q ss_pred             CEEEEEEEECCCEEECHHHHHHHCCCC------------HHHHHHHCCCCEEEECCCC----------------------
Q ss_conf             206688873489045599999870999------------8797630383246655998----------------------
Q gi|254781019|r    3 IGIEDISFYTTNQYLDLSVIAEKYRLD------------VAKFYVGIGQERMSVLNPD----------------------   48 (396)
Q Consensus         3 vGI~~i~~y~P~~~v~~~~l~~~~g~~------------~~k~~~~lGi~~r~v~~~~----------------------   48 (396)
                      .-|.++|.|+|+++++|+++.+.....            ..|+.+.+||++|+++.++                      
T Consensus         2 A~I~gigt~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~tgI~~R~~~~~~~~~~~~~~~~~~~~~~~r~~~~   81 (361)
T cd00831           2 ATILAIGTAVPPHRVPQSELVDFYRRLFSSDHLPELKEKLKRLCAKTGIETRYLVLPGGEETYAPRPEMSPSLDERNDIA   81 (361)
T ss_pred             EEEEEEEEECCCEEECHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCHHHCCCCCCCCCCHHHHHHHH
T ss_conf             19999887779926759999999987443334356789999999726986155552661220245655588878887779


Q ss_pred             -CCHHHHHHHHHHHHHHHCC--HHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECC-CHHHHHHHHHHHHHH
Q ss_conf             -5999999999999997279--578689999457887546005888863202687735898414-203588899878999
Q gi|254781019|r   49 -EDIVTMAAAAALPIMQNQD--KNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQ-ACYSATCALHMACAL  124 (396)
Q Consensus        49 -Ed~~tmA~~Aa~~~L~~~~--~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~-aC~g~~~AL~~A~~~  124 (396)
                       |.+.+||++|+++||++++  |+|||+||++|+| .+..|+++++|+++||+++++..+|+.+ ||+||++||.+|.++
T Consensus        82 ~~~~~~la~~Aa~~AL~~ag~~~~dId~lI~~Tst-~~~~Ps~a~~v~~~LGl~~~~~~~dl~~~gCsg~~~aL~~A~~~  160 (361)
T cd00831          82 LEEARELAEEAARGALDEAGLRPSDIDHLVVNTST-GNPTPSLDAMLINRLGLRPDVKRYNLGGMGCSAGAIALDLAKDL  160 (361)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCC-CCCCCCHHHHHHHHHCCCCCHHEEECCCCCCHHHHHHHHHHHHH
T ss_conf             98999999999999999819898999999998659-99989769999997389987003556467556899999999999


Q ss_pred             HHCCCCCEEEEEECCCCCCCCCCCCC-------CCCCCCEEEEEECCCCCCCEEE-------ECCCCCCCCCCC--CCCC
Q ss_conf             97399976999503320145888753-------3478302468842687630353-------100015678651--1275
Q gi|254781019|r  125 VAKSPERKVLIVASDVARYDLGSSGE-------PTQGCGAVAILISSQTSILEIE-------DITGIYTNDCMD--FWRP  188 (396)
Q Consensus       125 i~sg~~~~aLVV~sD~~~~~~~~~~~-------~t~GaGA~Allv~~~~~~~~~~-------~~~~~~~~~~~d--f~rp  188 (396)
                      +++|+.+++|||++|..+...+..+.       ..+||||+|++++.++......       ........+..+  .|..
T Consensus       161 i~~g~~~~vLVV~~E~~S~~~~~~d~~~~~v~~~LFGDGA~A~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (361)
T cd00831         161 LEANPGARVLVVSTELCSLWYRGPDHRSMLVGNALFGDGAAAVLLSNDPRDRRRERPLFELVRAASTLLPDSEDAMGWHL  240 (361)
T ss_pred             HHHCCCCEEEEEEEEECCEECCCCCCHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCC
T ss_conf             98299976999961211202068875777554200047725899842676665666526883777612468887666650


Q ss_pred             CCCCCEEECCHHHHHHHHHHHHHHHHHHHHHC--CCCHHHCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
Q ss_conf             88754235660169899999999999999962--9882110123311454057888886411024544100134555433
Q gi|254781019|r  189 NYRRTALVDGKYSTKIYLQSLEAVWHDYQKNK--GHDFNDFQYFCYHQPFTRMAEKAHIRLSKIVHQNLSVAEIEKAIGI  266 (396)
Q Consensus       189 ~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~--g~~~~did~~v~H~p~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~  266 (396)
                      ....+....++.......+.++..++.++++.  ++...|+++|++||++.++++....++....+          ++.+
T Consensus       241 ~~~g~~~~l~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~di~~~~~Hq~~~~Ii~~v~~~Lgl~~~----------~~~~  310 (361)
T cd00831         241 GEEGLTFVLSRDVPRLVEKNLERVLRKLLARLGIGLFKLAFDHWCVHPGGRAVLDAVEKALGLSPE----------DLEA  310 (361)
T ss_pred             CCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCEEEECCCCHHHHHHHHHHCCCCHH----------HHHH
T ss_conf             577537850636999999999999999999825899967725588787868999999998298968----------8325


Q ss_pred             HHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEE
Q ss_conf             3444532385432338999999997157436988899984079830377
Q gi|254781019|r  267 TTLYNRLIGNSYTASLYIALISLLDHSSENLAGKRVGFFSYGSGCVAEF  315 (396)
Q Consensus       267 ~~~~~~~~GN~~SASi~l~L~slLe~~~~~~~G~rIll~syGsG~~a~~  315 (396)
                      +....+++|||+|||||++|..+++ .+++++||+|++++||+|+..+.
T Consensus       311 s~~~l~~~GNtsSaSip~~L~~~~~-~~~~~~Gd~vl~~afG~Glt~~~  358 (361)
T cd00831         311 SRMVLRRYGNMSSSSVLYVLAYMEA-KGRVKRGDRGLLIAFGPGFTCES  358 (361)
T ss_pred             HHHHHHHHCCCHHHHHHHHHHHHHH-CCCCCCCCEEEEEEECCHHEEEE
T ss_conf             7878986385398899999999997-39999999899999810405531


No 23 
>pfam01154 HMG_CoA_synt_N Hydroxymethylglutaryl-coenzyme A synthase N terminal.
Probab=100.00  E-value=0  Score=315.52  Aligned_cols=165  Identities=31%  Similarity=0.501  Sum_probs=157.1

Q ss_pred             CCEEEEEEEECCCEEECHHHHHHHCCCCHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHC--CHHHCCEEEEECC
Q ss_conf             62066888734890455999998709998797630383246655998599999999999999727--9578689999457
Q gi|254781019|r    2 AIGIEDISFYTTNQYLDLSVIAEKYRLDVAKFYVGIGQERMSVLNPDEDIVTMAAAAALPIMQNQ--DKNLIDTLFFATE   79 (396)
Q Consensus         2 ~vGI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~~lGi~~r~v~~~~Ed~~tmA~~Aa~~~L~~~--~~~~Id~li~~T~   79 (396)
                      +|||++|++|+|++++++.+|++.+|.+++|+++|+||++|+|++++||++|||++|++++|++.  +|++|++|+++||
T Consensus         1 ~VGI~~i~~Y~P~~~v~~~~La~~rg~d~~K~~~GlG~~~mav~~~~ED~vTmAanAa~~ll~~~~i~~~~Ig~l~vgTE   80 (171)
T pfam01154         1 DVGIVALEIYFPSQYVDQAELEKYDGVSAGKYTIGLGQTKMGFCTDREDINSLCLTVVQKLMERNNLDYDCIGRLEVGTE   80 (171)
T ss_pred             CCCEEEEEEECCHHEECHHHHHHHHCCCHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEECCC
T ss_conf             98987898847711135999999959898885204586354279997279999999999999873999888407996377


Q ss_pred             CCCCCCHHHHHHHHHHHCCCCCC--EEEEECCCHHHHHHHHHHHHHHHHCCC--CCEEEEEECCCCCCCCCCCCCCCCCC
Q ss_conf             88754600588886320268773--589841420358889987899997399--97699950332014588875334783
Q gi|254781019|r   80 SSVDQSKSAAIWLHKLLGLNSSC--RVVELKQACYSATCALHMACALVAKSP--ERKVLIVASDVARYDLGSSGEPTQGC  155 (396)
Q Consensus        80 t~~~~~~~~a~~v~~~Lgl~~~~--~~~Di~~aC~g~~~AL~~A~~~i~sg~--~~~aLVV~sD~~~~~~~~~~~~t~Ga  155 (396)
                      |++|.+||++++||++|+++.++  +++|+++||+|+|+||++|.+||++++  ++++|||++|+++|..+++ |+|+||
T Consensus        81 S~iD~SKs~~t~l~~ll~~~~~~~~~~~e~k~ACyggTaAL~~a~~~v~s~~~~~k~alVV~sDiA~y~~~~~-e~TqGA  159 (171)
T pfam01154        81 TIIDKSKSVKTVLMQLFEESGNTDIEGIDTTNACYGGTAALFNALNWIESSSWDGRYALVVAGDIAIYAKGNA-RPTGGA  159 (171)
T ss_pred             CCCCCCCCHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCC-CCCCCC
T ss_conf             6456655689999998376578874033300106989999999999998288789639999841001379998-756770


Q ss_pred             CEEEEEECCCCC
Q ss_conf             024688426876
Q gi|254781019|r  156 GAVAILISSQTS  167 (396)
Q Consensus       156 GA~Allv~~~~~  167 (396)
                      ||+|||++++.+
T Consensus       160 GAVAmLv~~nap  171 (171)
T pfam01154       160 GAVAMLIGPNAP  171 (171)
T ss_pred             CEEEEEECCCCC
T ss_conf             358999758999


No 24 
>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00  E-value=2.8e-33  Score=225.84  Aligned_cols=303  Identities=17%  Similarity=0.194  Sum_probs=226.0

Q ss_pred             EEEEEEEECCCEEECHHHHHHHC----CC-CHH---H-HHHHCCCCEEEECCCC-----------------CCHHHHHHH
Q ss_conf             06688873489045599999870----99-987---9-7630383246655998-----------------599999999
Q gi|254781019|r    4 GIEDISFYTTNQYLDLSVIAEKY----RL-DVA---K-FYVGIGQERMSVLNPD-----------------EDIVTMAAA   57 (396)
Q Consensus         4 GI~~i~~y~P~~~v~~~~l~~~~----g~-~~~---k-~~~~lGi~~r~v~~~~-----------------Ed~~tmA~~   57 (396)
                      -|.+++.++|.+.++++|+....    .. .-+   + +.+.-+|++|.+..|.                 |.++.+++.
T Consensus         3 ~i~sv~t~~Ppy~~~Qse~~d~f~~~~~~~~~~~I~r~l~~~~~i~~R~~v~Pl~~y~e~~~f~ekN~ifie~a~~l~v~   82 (356)
T COG3424           3 VIASVATALPPYRYNQSEITDSFAELPFQEGREDIPRVLHANAQINRRHLVLPLDWYREPHGFGEKNEIFIEEAVPLGVD   82 (356)
T ss_pred             EEEECCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEECCCHHHCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf             54000057996435667889999873152226788999865336251212262766417887566303499987999999


Q ss_pred             HHHHHHHHCC--HHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECC-CHHHHHHHHHHHHHHHHCCCCCEEE
Q ss_conf             9999997279--578689999457887546005888863202687735898414-2035888998789999739997699
Q gi|254781019|r   58 AALPIMQNQD--KNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQ-ACYSATCALHMACALVAKSPERKVL  134 (396)
Q Consensus        58 Aa~~~L~~~~--~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~-aC~g~~~AL~~A~~~i~sg~~~~aL  134 (396)
                      |.++||+..+  |+|||+|+++|+|+. ..|+....++++||+++++..+-+.+ +|+|+.+||..|.+++++.|..++|
T Consensus        83 a~r~aL~~~~l~pedId~vv~vtsTG~-~~Ps~dari~~~Lgl~p~~~Rvpv~glGCaaga~glara~~y~ra~P~~~vl  161 (356)
T COG3424          83 ALRRALDGSPLRPEDIDAVVTVTSTGL-ATPSLDARIVGELGLSPDTRRVPVWGLGCAAGAAGLARARDYCRAAPDANVL  161 (356)
T ss_pred             HHHHHHCCCCCCHHHCCEEEEEEECCC-CCCCHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCEEE
T ss_conf             999885269999778867999950255-4787549988613999764052200320142115789999997508665089


Q ss_pred             EEECCCCCCCCCCCC--------CCCCCCCEEEEEECCCCCCCEEE-------ECCCCCCCCCCCC--CCCCCCCCEEEC
Q ss_conf             950332014588875--------33478302468842687630353-------1000156786511--275887542356
Q gi|254781019|r  135 IVASDVARYDLGSSG--------EPTQGCGAVAILISSQTSILEIE-------DITGIYTNDCMDF--WRPNYRRTALVD  197 (396)
Q Consensus       135 VV~sD~~~~~~~~~~--------~~t~GaGA~Allv~~~~~~~~~~-------~~~~~~~~~~~df--~rp~~~~~~~~d  197 (396)
                      |||.|.++-..-..+        -..+|||++|++++.+.+.....       ..+.+-..+.-|.  |-=....+..+-
T Consensus       162 vV~vELCSLt~~~~d~t~s~lVgtaLF~DG~AA~vv~gd~~~~~~~~~~p~i~~s~StL~~dse~~Mgwdv~d~G~~~vl  241 (356)
T COG3424         162 VVCVELCSLTYVFADDTKSNLVGTALFGDGAAAVVVSGDRRAEGKRPLRPDILDSFSTLYPDSEDIMGWDVGDQGLKVVL  241 (356)
T ss_pred             EEEEEEEEEEEECCCCCCCCCEEEEEECCCEEEEEEECCCCCCCCCCCCCEECCCCCCCCCCCCCCCCEEECCCCEEEEE
T ss_conf             99946321554347887545133330048705899834643346678975000454546886210011530488479997


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             60169899999999999999962988211012331145405788888641102454410013455543334445323854
Q gi|254781019|r  198 GKYSTKIYLQSLEAVWHDYQKNKGHDFNDFQYFCYHQPFTRMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNS  277 (396)
Q Consensus       198 g~~~~~~y~~~~~~a~~~~l~~~g~~~~did~~v~H~p~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~  277 (396)
                      .+......-..+.+.+..++..++++.+||++|+.|..++|++.+....|....+          ...-+....+++|||
T Consensus       242 Srdlp~lIe~~l~~~V~~fL~~~~ls~~dI~~w~~HPGG~KVida~~~sLgls~e----------~l~~s~~~L~~~GNM  311 (356)
T COG3424         242 SRDLPNLIESYLAPNVTTFLATHGLSIEDIEAWVVHPGGPKVIDAYEESLGLSPE----------ALELSWDVLREYGNM  311 (356)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCEEEECCCCCHHHHHHHHHCCCCHH----------HHHHHHHHHHHHCCC
T ss_conf             5732689999852558999997687665411155579970699999876189988----------999999999982786


Q ss_pred             CCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEEEEE
Q ss_conf             323389999999971574369888999840798303778778
Q gi|254781019|r  278 YTASLYIALISLLDHSSENLAGKRVGFFSYGSGCVAEFFSGI  319 (396)
Q Consensus       278 ~SASi~l~L~slLe~~~~~~~G~rIll~syGsG~~a~~f~~~  319 (396)
                      +|||+...|...|++.  -++|+|.+++.||.|+++|..-++
T Consensus       312 SSatvLfVL~d~l~~~--~~~g~~Gl~~A~GPGf~sElvL~~  351 (356)
T COG3424         312 SSATVLFVLEDTLQKA--PKSGSRGLMFAMGPGFCSELVLLD  351 (356)
T ss_pred             CCHHHHHHHHHHHHHC--CCCCCCEEEEECCCCCEEEEEEEE
T ss_conf             5210299999999736--887763034532786322244577


No 25 
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=99.97  E-value=6.1e-30  Score=205.11  Aligned_cols=233  Identities=19%  Similarity=0.154  Sum_probs=175.5

Q ss_pred             CCCCCHHHHHHHHHHHHHHHCC--HHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHH
Q ss_conf             9985999999999999997279--57868999945788754600588886320268773589841420358889987899
Q gi|254781019|r   46 NPDEDIVTMAAAAALPIMQNQD--KNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACA  123 (396)
Q Consensus        46 ~~~Ed~~tmA~~Aa~~~L~~~~--~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~  123 (396)
                      .+.+.+.+||++|+++||++++  +++||+||++|.|+++..|+.+..|+..||+. +.++|++..+|+++++||..|..
T Consensus         2 ~~g~~~s~la~~Aa~~Al~dAGi~~~~i~~viv~t~t~~~~~p~~a~~v~~~lgl~-~~p~~~v~~aCss~~~Al~~A~~   80 (254)
T cd00327           2 GLGITASELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGIS-GGPAYSVNQACATGLTALALAVQ   80 (254)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHCCCHHHCCEEEEEEECCCCHHHHHHHHHHHHCCCC-CCCCEEHHHHHHHHHHHHHHHHH
T ss_conf             98844999999999999998299854688999999787502247999999982999-98806612024377799999999


Q ss_pred             HHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEE-----ECCCCCCCCCCCCCCCCCCCCEEECC
Q ss_conf             9973999769995033201458887533478302468842687630353-----10001567865112758875423566
Q gi|254781019|r  124 LVAKSPERKVLIVASDVARYDLGSSGEPTQGCGAVAILISSQTSILEIE-----DITGIYTNDCMDFWRPNYRRTALVDG  198 (396)
Q Consensus       124 ~i~sg~~~~aLVV~sD~~~~~~~~~~~~t~GaGA~Allv~~~~~~~~~~-----~~~~~~~~~~~df~rp~~~~~~~~dg  198 (396)
                      +|++|+.+.+||+++|.          +.+|+||+++++++.+......     ...+...  ..             +|
T Consensus        81 ~i~~G~~~~vlv~g~e~----------~~~gdGAga~vl~~~~~a~~~~~~~~~~i~~~~~--~~-------------~g  135 (254)
T cd00327          81 QVQNGKADIVLAGGSEE----------FVFGDGAAAAVVESEEHALRRGAHPQAEIVSTAA--TF-------------DG  135 (254)
T ss_pred             HHHHCCCCEEEECCCEE----------EEECCCCEEEEECCHHHHHCCCCCEEEEEECCCC--CC-------------CC
T ss_conf             99958999899738768----------8706760888730245665389851477851312--34-------------69


Q ss_pred             H-HHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             0-169899999999999999962988211012331145405788888641102454410013455543334445323854
Q gi|254781019|r  199 K-YSTKIYLQSLEAVWHDYQKNKGHDFNDFQYFCYHQPFTRMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNS  277 (396)
Q Consensus       199 ~-~~~~~y~~~~~~a~~~~l~~~g~~~~did~~v~H~p~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~  277 (396)
                      . .......+.+.+++++.++++|++++|||||.+||.+.++.+....++.....+.        +..+....-.++|||
T Consensus       136 ~~~~~~p~~~~~~~~i~~al~~agl~~~dId~v~~H~tgt~i~D~iE~~a~~~~~~~--------~~~~i~s~k~~~GH~  207 (254)
T cd00327         136 ASMVPAVSGEGLARAARKALEGAGLTPSDIDYVEAHGTGTPIGDAVELALGLDPDGV--------RSPAVSATLIMTGHP  207 (254)
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCCCCCHHHHHHHCCCCCCC--------CCCCCCCCCCCCCCC
T ss_conf             986627887899999999999839986452579978887835459999865340069--------988706740141542


Q ss_pred             CCCHHHHHHHHHHHH--CC----CCCCCCEEEEEEECCCCC
Q ss_conf             323389999999971--57----436988899984079830
Q gi|254781019|r  278 YTASLYIALISLLDH--SS----ENLAGKRVGFFSYGSGCV  312 (396)
Q Consensus       278 ~SASi~l~L~slLe~--~~----~~~~G~rIll~syGsG~~  312 (396)
                      .+||.++.|...+..  .+    ..+.++++++.|||.|..
T Consensus       208 ~~Asg~~~l~~~~l~l~~~~ippt~~~~~~~~~~~fG~Ggt  248 (254)
T cd00327         208 LGAAGLAILDELLLMLEHEFIPPTPREPRTVLLLGFGLGGT  248 (254)
T ss_pred             HHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCE
T ss_conf             99999999999999985598697899999999957564711


No 26 
>pfam00195 Chal_sti_synt_N Chalcone and stilbene synthases, N-terminal domain. The C-terminal domain of Chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in this N-terminal domain.
Probab=99.93  E-value=4e-24  Score=168.98  Aligned_cols=162  Identities=26%  Similarity=0.356  Sum_probs=134.8

Q ss_pred             EEEEEEEECCCEEECHHHHHHH----CCCC--------HHHHHHHCCCCEEEECCCCC----------------------
Q ss_conf             0668887348904559999987----0999--------87976303832466559985----------------------
Q gi|254781019|r    4 GIEDISFYTTNQYLDLSVIAEK----YRLD--------VAKFYVGIGQERMSVLNPDE----------------------   49 (396)
Q Consensus         4 GI~~i~~y~P~~~v~~~~l~~~----~g~~--------~~k~~~~lGi~~r~v~~~~E----------------------   49 (396)
                      -|.+||..+|+++++++++.+.    .+.+        ..++.+..||++|+.+-++|                      
T Consensus        18 ~Il~IgTA~Pp~~~~Q~~~~d~~~~~~~~~~~~~~k~~l~ri~~~sgI~~R~~vl~~e~~~~~P~~~~~~~ps~~~R~~~   97 (228)
T pfam00195        18 TILAIGTATPSNCVDQSTYPDYYFRVTKSEHLTDLKEKFQRICEKSTIKKRYMVLTEEILKENPELCTEMAPSLDARQDI   97 (228)
T ss_pred             EEEEEEEECCCCEECHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEECHHHHHHCCCCCCCCCCCHHHHHHH
T ss_conf             99999971899552489999999997344324267899998998469883158617687614955102569998999999


Q ss_pred             ---CHHHHHHHHHHHHHHHCC--HHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEEC-CCHHHHHHHHHHHHH
Q ss_conf             ---999999999999997279--57868999945788754600588886320268773589841-420358889987899
Q gi|254781019|r   50 ---DIVTMAAAAALPIMQNQD--KNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELK-QACYSATCALHMACA  123 (396)
Q Consensus        50 ---d~~tmA~~Aa~~~L~~~~--~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~-~aC~g~~~AL~~A~~  123 (396)
                         .+..|+.+|+++||++++  ++||++||++|+|+. ..|+....|+++|||++++..+.+. .+|+|++++|..|.+
T Consensus        98 ~~~~a~~La~~Aa~~AL~~aG~~~~dIthlv~vt~TG~-~~Pg~d~~l~~~LGL~~~v~R~~i~~~GC~gg~~gL~~A~~  176 (228)
T pfam00195        98 AVVEVPKLGKEAALKAIKEWGQPKSKITHLVFCTTSGV-DMPGADYQLTKLLGLRPSVKRVMLYQQGCFAGGTVLRLAKD  176 (228)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCHHHCCEEEEECCCCC-CCCCHHHHHHHHCCCCCCCHHEEEECCCCHHHHHHHHHHHH
T ss_conf             99999999999999999995889889999999947999-88747899999829898721114114541648999999999


Q ss_pred             HHHCCCCCEEEEEECCCCCCCCCCCCC---------CCCCCCEEEEEECCCC
Q ss_conf             997399976999503320145888753---------3478302468842687
Q gi|254781019|r  124 LVAKSPERKVLIVASDVARYDLGSSGE---------PTQGCGAVAILISSQT  166 (396)
Q Consensus       124 ~i~sg~~~~aLVV~sD~~~~~~~~~~~---------~t~GaGA~Allv~~~~  166 (396)
                      ++++++..++||||+|.++.....+.+         ..|||||+|++++.+|
T Consensus       177 ~~~~~p~~~VLvv~~Elcsl~f~~~~~~~~~~lV~~aLFgDGAaAvvv~adP  228 (228)
T pfam00195       177 LAENNKGARVLVVCSEITAVTFRGPSETHLDSLVGQALFGDGAAAVIIGSDP  228 (228)
T ss_pred             HHHHCCCCEEEEEEEEHHHEEECCCCCCCHHHHHHHHHCCCCCEEEEEECCC
T ss_conf             9982999879999824011030488765677773441202751799971699


No 27 
>pfam08541 ACP_syn_III_C 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal. This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EC:2.3.1.41, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria.
Probab=99.58  E-value=5.4e-15  Score=112.20  Aligned_cols=85  Identities=21%  Similarity=0.249  Sum_probs=69.4

Q ss_pred             HHHCCCCHHHCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCC
Q ss_conf             99629882110123311454057888886411024544100134555433344453238543233899999999715743
Q gi|254781019|r  217 QKNKGHDFNDFQYFCYHQPFTRMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALISLLDHSSEN  296 (396)
Q Consensus       217 l~~~g~~~~did~~v~H~p~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~slLe~~~~~  296 (396)
                      |+++|++++|||+|++||++.++.+...+++....++.             ....+++|||+|||+|++|..+++ .+++
T Consensus         1 L~~~g~~~~dId~~i~Hq~~~~~~~~i~~~lgi~~~k~-------------~~~~~~~GN~~sasip~~L~~~~~-~~~i   66 (90)
T pfam08541         1 LEKAGLTPDDIDWFVPHQANLRIIDAVAKRLGLPPEKV-------------VVNLDRYGNTSAASIPLALDEAVE-EGKL   66 (90)
T ss_pred             CCCCCCCHHHCCEEEECCCCHHHHHHHHHHHCCCHHHC-------------EEHHHCCCCCCCCHHHHHHHHHHH-CCCC
T ss_conf             94404997999999978888899999999819791325-------------032440377620239999999998-1999


Q ss_pred             CCCCEEEEEEECCCCCEEE
Q ss_conf             6988899984079830377
Q gi|254781019|r  297 LAGKRVGFFSYGSGCVAEF  315 (396)
Q Consensus       297 ~~G~rIll~syGsG~~a~~  315 (396)
                      ++||+|+++|||+|.....
T Consensus        67 ~~Gd~vll~~~G~G~s~~~   85 (90)
T pfam08541        67 KPGDLVLLVGFGAGLTWGA   85 (90)
T ss_pred             CCCCEEEEEEECCCHHHEE
T ss_conf             9999899998721041179


No 28 
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2  has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=99.47  E-value=3.8e-11  Score=88.30  Aligned_cols=191  Identities=19%  Similarity=0.148  Sum_probs=127.8

Q ss_pred             CCCCHHHHHHHHHHHHHHHCC--HHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHH
Q ss_conf             985999999999999997279--578689999457887546005888863202687735898414203588899878999
Q gi|254781019|r   47 PDEDIVTMAAAAALPIMQNQD--KNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACAL  124 (396)
Q Consensus        47 ~~Ed~~tmA~~Aa~~~L~~~~--~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~  124 (396)
                      .+.+..+|++.|++++|++++  |++||.+++++..+.....-.+..+...+|+.+ +.++.+..+|.++..++..|...
T Consensus        12 ~~~s~~eL~~~a~~~Al~dagi~~~~ID~v~~g~~~~~~~~~~~~~~~a~~~G~~~-~~~~~v~~~c~Sg~~ai~~Aa~~   90 (375)
T cd00829          12 SDRSPLELAAEAARAALDDAGLEPADIDAVVVGNAAGGRFQSFPGALIAEYLGLLG-KPATRVEAAGASGSAAVRAAAAA   90 (375)
T ss_pred             CCCCHHHHHHHHHHHHHHHHCCCHHHHCEEEEEECCCCCCCCHHHHHHHHHCCCCC-CCEEEECCCCHHHHHHHHHHHHH
T ss_conf             99699999999999999983919899499999912875534769999999829999-86588689886999999999999


Q ss_pred             HHCCCCCEEEEEECCCCCCCCCCCC-------------------------------------------------------
Q ss_conf             9739997699950332014588875-------------------------------------------------------
Q gi|254781019|r  125 VAKSPERKVLIVASDVARYDLGSSG-------------------------------------------------------  149 (396)
Q Consensus       125 i~sg~~~~aLVV~sD~~~~~~~~~~-------------------------------------------------------  149 (396)
                      |++|..+.+|+++.|..+..+....                                                       
T Consensus        91 I~~G~~~~vl~~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a~~~~~~~g~~re~~~~~a~~~~~~A~  170 (375)
T cd00829          91 IASGLADVVLVVGAEKMSDVPTGDEAGGRASDLEWEGPEPPGGLTPPALYALAARRYMHRYGTTREDLAKVAVKNHRNAA  170 (375)
T ss_pred             HHCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf             97799998999987516778765554445677203332024466578999999999999979799999999999998644


Q ss_pred             -------------------C----C-------CCCCCEEEEEECCCCCCCEE--EE--CCCCCCCCCCCCCCCCCCCCEE
Q ss_conf             -------------------3----3-------47830246884268763035--31--0001567865112758875423
Q gi|254781019|r  150 -------------------E----P-------TQGCGAVAILISSQTSILEI--ED--ITGIYTNDCMDFWRPNYRRTAL  195 (396)
Q Consensus       150 -------------------~----~-------t~GaGA~Allv~~~~~~~~~--~~--~~~~~~~~~~df~rp~~~~~~~  195 (396)
                                         +    |       ...|||+|+++.+.......  ..  ..+..  ...+.+-+...+.  
T Consensus       171 ~np~A~~~~~~t~e~~~~~~~i~~Pl~~~~~~~~~DGAaa~vl~s~~~A~~~~~~p~~i~g~~--~~~~~~~~~~~~~--  246 (375)
T cd00829         171 RNPYAQFRKPITVEDVLNSRMIADPLRLLDCCPVSDGAAAVVLASEERARELTDRPVWILGVG--AASDTPSLSERDD--  246 (375)
T ss_pred             CCCCCCCCCCCCHHHHHCCCCCCCCCCHHHCCCCCCCCEEEEEECHHHHHHCCCCCEEEEEEE--EEECCCCCCCCCC--
T ss_conf             286120258858999823476446621431576666405899963999987699937999999--9952654356785--


Q ss_pred             ECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCCHHHHHHHHHHCC
Q ss_conf             566016989999999999999996298821101233114540578888864110
Q gi|254781019|r  196 VDGKYSTKIYLQSLEAVWHDYQKNKGHDFNDFQYFCYHQPFTRMAEKAHIRLSK  249 (396)
Q Consensus       196 ~dg~~~~~~y~~~~~~a~~~~l~~~g~~~~did~~v~H~p~~k~~~~~~~~l~~  249 (396)
                             .........+.+++++++|++++|||.|=+|-+|+-++....+.+..
T Consensus       247 -------~~~~~~~~~A~~~al~~aGl~~~DiD~~Ei~eaFa~~~l~~~e~lGl  293 (375)
T cd00829         247 -------FLSLDAARLAARRAYKMAGITPDDIDVAELYDCFTIAELLALEDLGF  293 (375)
T ss_pred             -------CCCCHHHHHHHHHHHHHCCCCHHHCCEEEECCCCHHHHHHHHHHCCC
T ss_conf             -------22232599999999998199978765642015766999999998099


No 29 
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=99.45  E-value=7.2e-12  Score=92.78  Aligned_cols=215  Identities=16%  Similarity=0.137  Sum_probs=134.3

Q ss_pred             HHHHHHHHHHHHHHHCC--HHHCC----EEEEECCCCCCC---------------------CHHHHHHHHHHHCCCCCCE
Q ss_conf             99999999999997279--57868----999945788754---------------------6005888863202687735
Q gi|254781019|r   51 IVTMAAAAALPIMQNQD--KNLID----TLFFATESSVDQ---------------------SKSAAIWLHKLLGLNSSCR  103 (396)
Q Consensus        51 ~~tmA~~Aa~~~L~~~~--~~~Id----~li~~T~t~~~~---------------------~~~~a~~v~~~Lgl~~~~~  103 (396)
                      +.-+|+.|+++||++++  ++++.    -|+++|..+.+.                     .+..+..|...||+...  
T Consensus        11 vsl~al~aa~eAl~dAGl~~~~~~~~r~GV~~Gs~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~gl~Gp--   88 (332)
T cd00825          11 VSILGFEAAERAIADAGLSREYQKNPIVGVVVGTGGGSPRFQVFGADAMRAVGPYVVTKAMFPGASGQIATPLGIHGP--   88 (332)
T ss_pred             HHHHHHHHHHHHHHHCCCCHHHCCCCCEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC--
T ss_conf             999999999999997599934457888899999688318889853123223686424665534899999999689896--


Q ss_pred             EEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC----------CCCC-----------CCCCCCCCEEEEEE
Q ss_conf             89841420358889987899997399976999503320145----------8887-----------53347830246884
Q gi|254781019|r  104 VVELKQACYSATCALHMACALVAKSPERKVLIVASDVARYD----------LGSS-----------GEPTQGCGAVAILI  162 (396)
Q Consensus       104 ~~Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~----------~~~~-----------~~~t~GaGA~Allv  162 (396)
                      ++-+..+|++++.||..|..+|++|..+.+||.++|.....          ..++           +=+..|.||+++++
T Consensus        89 ~~tv~taCaS~l~Ai~~A~~~i~~G~~d~aivgg~~~~~~~~~~~~~~~~~~~~~~~~~rpFd~~~~G~v~gEGa~~lvL  168 (332)
T cd00825          89 AYDVSAACAGSLHALSLAADAVQNGKQDIVLAGGSEELAAPMDCEFDAMGALSTPEKASRTFDAAADGFVFGDGAGALVV  168 (332)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCHHHHH
T ss_conf             30313541688999999999998389987462031211798999999972778989887888788997200265403554


Q ss_pred             CCCCC-------CCEEEECCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCC
Q ss_conf             26876-------30353100015678651127588754235660169899999999999999962988211012331145
Q gi|254781019|r  163 SSQTS-------ILEIEDITGIYTNDCMDFWRPNYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHDFNDFQYFCYHQP  235 (396)
Q Consensus       163 ~~~~~-------~~~~~~~~~~~~~~~~df~rp~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~~did~~v~H~p  235 (396)
                      ++.+.       +......++... +..   . .....|          -.+.+.+++++.+++.+++++||||+..|..
T Consensus       169 e~~~~A~~rg~~i~a~i~g~~~~~-dg~---~-~~~~~p----------~~~~~~~ai~~Al~~agi~p~~I~yI~ahgt  233 (332)
T cd00825         169 EELEHALARGAHIYAEIVGTAATI-DGA---G-MGAFAP----------SAEGLARAAKEALAVAGLTVWDIDYLVAHGT  233 (332)
T ss_pred             HHHHHHHHCCCCEEEEECCCEEEC-CCC---C-CCCCCC----------CHHHHHHHHHHHHHHCCCCCCCCCEEEECCC
T ss_conf             008888752896203311345877-898---7-888797----------9999999999999984988200147991778


Q ss_pred             CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
Q ss_conf             4057888886411024544100134555433344453238543233899999999
Q gi|254781019|r  236 FTRMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALISLL  290 (396)
Q Consensus       236 ~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~slL  290 (396)
                      +.+..+....+.......+        ...+....-..+||+-.||=.+.|...+
T Consensus       234 Gt~~~D~~E~~Al~~~fg~--------~~~~v~S~Ks~~GH~~~AsG~~~li~~~  280 (332)
T cd00825         234 GTPIGDVKELKLLRSEFGD--------KSPAVSATKAMTGNLSSAAVVLAVDEAV  280 (332)
T ss_pred             CCCCCCHHHHHHHHHHHCC--------CCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf             6855559999999998578--------9982105745644552656999999999


No 30 
>pfam08392 FAE1_CUT1_RppA FAE1/Type III polyketide synthase-like protein. The members of this family are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region featured in this family contains the active site residues, as well as motifs involved in substrate binding.
Probab=99.45  E-value=6.7e-12  Score=93.00  Aligned_cols=165  Identities=14%  Similarity=0.187  Sum_probs=118.5

Q ss_pred             CCEEEEEEEECCCE--EECHHHHHHH---CC-CCH------HHHHHHCCCCEEEECCCC-----CC-HH--------HHH
Q ss_conf             62066888734890--4559999987---09-998------797630383246655998-----59-99--------999
Q gi|254781019|r    2 AIGIEDISFYTTNQ--YLDLSVIAEK---YR-LDV------AKFYVGIGQERMSVLNPD-----ED-IV--------TMA   55 (396)
Q Consensus         2 ~vGI~~i~~y~P~~--~v~~~~l~~~---~g-~~~------~k~~~~lGi~~r~v~~~~-----Ed-~~--------tmA   55 (396)
                      .|....++.|-|+.  +++.+.+.++   .+ .++      .|+....|+.+....++.     ++ +.        ..-
T Consensus         8 ~vYLvDfaC~kp~~~~kv~~~~~~e~~~~~~~f~~~s~~F~~kil~rSGlG~eTy~P~~~~~~p~~~s~~~ar~Eae~v~   87 (290)
T pfam08392         8 PVYLVDYACYKPPDDRKVSTETFMEHIRRNGKFDEESLDFQRKILERSGLGEETYVPRSVLEIPPNPTMAEAREEAEEVM   87 (290)
T ss_pred             CEEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHH
T ss_conf             88998553207972031699999999986589986899999999996489998857825425899987999999999999


Q ss_pred             HHHHHHHHHHC--CHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECC-CHHHHHHHHHHHHHHHHCCCCCE
Q ss_conf             99999999727--9578689999457887546005888863202687735898414-20358889987899997399976
Q gi|254781019|r   56 AAAALPIMQNQ--DKNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQ-ACYSATCALHMACALVAKSPERK  132 (396)
Q Consensus        56 ~~Aa~~~L~~~--~~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~-aC~g~~~AL~~A~~~i~sg~~~~  132 (396)
                      ..|..++|++.  +|+|||.||+-. |..--.||.++.|.++.++..++..|.+.. +|++++-++.+|.++++.+++.+
T Consensus        88 f~avd~Lf~ktgv~P~dIdiLVvNc-Slf~PtPSLsamivNrykmR~di~s~nLsGMGCSAglIsIdLAk~lL~~~~ns~  166 (290)
T pfam08392        88 FGAVDELFAKTGVRPRDIGILVVNC-SLFNPTPSLSAMIVNRYKMRGDIKSYNLSGMGCSAGLISIDLAKDLLQVHPNTY  166 (290)
T ss_pred             HHHHHHHHHHCCCCHHHCCEEEEEC-CCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCE
T ss_conf             9999999997399876899999967-788888528999988606864300633667651134757999999998489965


Q ss_pred             EEEEECCCCCCCCCCCCC-------CCCCCCEEEEEECCCCC
Q ss_conf             999503320145888753-------34783024688426876
Q gi|254781019|r  133 VLIVASDVARYDLGSSGE-------PTQGCGAVAILISSQTS  167 (396)
Q Consensus       133 aLVV~sD~~~~~~~~~~~-------~t~GaGA~Allv~~~~~  167 (396)
                      ||||++|..+...-...+       ..+..|++|++++.++.
T Consensus       167 ALVvSTE~it~n~Y~G~~rsmLl~NcLFR~GgAAiLLSN~~~  208 (290)
T pfam08392       167 ALVVSTENITPNWYAGNDRSMLLPNCLFRMGGAAILLSNKPA  208 (290)
T ss_pred             EEEEEEEECCCCCCCCCCHHHHCCCCCCCCCCEEEEEECCCC
T ss_conf             999985304544535873665014011357714798305844


No 31 
>PRK06059 lipid-transfer protein; Provisional
Probab=99.44  E-value=2e-10  Score=83.87  Aligned_cols=266  Identities=15%  Similarity=0.117  Sum_probs=149.4

Q ss_pred             HCCCCEEEECCCCCCHHHHHHHHHHHHHHHCC--HHHCCEEEEECCCCCCC-CHHHHHHHHHHHCCCCCCEEEEECCCHH
Q ss_conf             03832466559985999999999999997279--57868999945788754-6005888863202687735898414203
Q gi|254781019|r   36 GIGQERMSVLNPDEDIVTMAAAAALPIMQNQD--KNLIDTLFFATESSVDQ-SKSAAIWLHKLLGLNSSCRVVELKQACY  112 (396)
Q Consensus        36 ~lGi~~r~v~~~~Ed~~tmA~~Aa~~~L~~~~--~~~Id~li~~T~t~~~~-~~~~a~~v~~~Lgl~~~~~~~Di~~aC~  112 (396)
                      |.|+.+  +...+.+..+|+++|++++|++++  ++|||.+++++...... .......+.+.||+. ..+...+..+|.
T Consensus        10 GvG~t~--~gr~~r~~~~l~~eA~~~AL~DAGl~~~dVD~v~~~~~~~~~~~~~~~~~~~a~~lGl~-g~p~~~v~~~~a   86 (399)
T PRK06059         10 GAGMHP--WGKWGRDFTEYGVVAARAALADAGLDWRQVQLVAGADTIRNGYPGFVAGATFAQKLGWN-GVPVTSSYAACA   86 (399)
T ss_pred             EECCCC--CCCCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCCCCCCCCCCHHHHHHHHCCCC-CCCCCCCCCCHH
T ss_conf             823466--56389798999999999999855999899468843034566777532269999975998-863112116248


Q ss_pred             HHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCC---------CC-------------C----------------------
Q ss_conf             588899878999973999769995033201458---------88-------------7----------------------
Q gi|254781019|r  113 SATCALHMACALVAKSPERKVLIVASDVARYDL---------GS-------------S----------------------  148 (396)
Q Consensus       113 g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~~---------~~-------------~----------------------  148 (396)
                      ++..|+..|...|++|..+.+||+++|......         ..             +                      
T Consensus        87 sG~~a~~~A~~~I~sG~~d~vlvvg~e~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~p~~~Al~a~rym~~yG~t~e~lA  166 (399)
T PRK06059         87 SGSQALQSARAQILAGFCDVALVIGADTTPKGFFAPVGGERKNDPDWQRFHLIGATNTVYFALLARRRMDLYGATVEDFA  166 (399)
T ss_pred             HHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHH
T ss_conf             99999999999998499878999403357876544554556677114443014785088999999999999797999999


Q ss_pred             ---------------------------------CCC-------CCCCCEEEEEECCCCC----------CCEEEECCCCC
Q ss_conf             ---------------------------------533-------4783024688426876----------30353100015
Q gi|254781019|r  149 ---------------------------------GEP-------TQGCGAVAILISSQTS----------ILEIEDITGIY  178 (396)
Q Consensus       149 ---------------------------------~~~-------t~GaGA~Allv~~~~~----------~~~~~~~~~~~  178 (396)
                                                       .+|       .-.|||+|+++..+..          ...+... +..
T Consensus       167 ~vavk~~~~a~~NP~A~~r~~it~edvl~s~~Ia~PL~l~dc~~~sDGAaAvVl~s~e~A~~~~~~~~~~~~i~~~-~~~  245 (399)
T PRK06059        167 QVKVKNARHGLDNPNARYRKEVSVEDVLASPVVSDPLRLLDICATSDGAAALIVASKSFAEKHLGSVAGVPSVRAI-STV  245 (399)
T ss_pred             HHHHHHHHHHHHCCHHHCCCCCCHHHHCCCCHHHHCCCCCCCCCCCCCEEEEEEECHHHHHHHCCCCCCCEEEEEE-EEE
T ss_conf             9999999877109286668998878872382645261551317888850899995599998722356788399999-840


Q ss_pred             CCCCCCCCCCCCCCCEEECCHHHHHHHHH-HHHHHHHHHHHHCCCCHHHCCEEEECCCCCHHHHHHHHHHCCHHHHHHHH
Q ss_conf             67865112758875423566016989999-99999999999629882110123311454057888886411024544100
Q gi|254781019|r  179 TNDCMDFWRPNYRRTALVDGKYSTKIYLQ-SLEAVWHDYQKNKGHDFNDFQYFCYHQPFTRMAEKAHIRLSKIVHQNLSV  257 (396)
Q Consensus       179 ~~~~~df~rp~~~~~~~~dg~~~~~~y~~-~~~~a~~~~l~~~g~~~~did~~v~H~p~~k~~~~~~~~l~~~~~~~~~~  257 (396)
                      + +.+....|...+.. .+.......... .-..+.+...+++|++++|||.+-.|-+|.-+..-....+.... +....
T Consensus       246 ~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~a~~ay~~AGi~p~DiDvae~yD~ft~~~l~~lE~lGf~~-~Ge~~  322 (399)
T PRK06059        246 T-PQYPQHLPELPDIA-TDSTAAVPAPERVFKDQILDAAYAEAGIGPEDLSLAEVYDLSTALELDWYEHLGLCP-KGEAE  322 (399)
T ss_pred             C-CCCCCCCCCCCCCC-CCCHHCCCCHHHHHHHHHHHHHHHHCCCCHHHCEEEEECCCCCHHHHHHHHHCCCCC-CCCHH
T ss_conf             5-75443332333212-221010233155678999999999829997887277531666098999999849978-98379


Q ss_pred             HHHH---------HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH----CC-CCCCCCEEEEEEECC
Q ss_conf             1345---------5543334445323854323389999999971----57-436988899984079
Q gi|254781019|r  258 AEIE---------KAIGITTLYNRLIGNSYTASLYIALISLLDH----SS-ENLAGKRVGFFSYGS  309 (396)
Q Consensus       258 ~~~e---------~~~~~~~~~~~~~GN~~SASi~l~L~slLe~----~~-~~~~G~rIll~syGs  309 (396)
                      ..++         -.++++-=+.. .|+.+.++=...+.++..|    ++ +.-+|-|++|+.-+.
T Consensus       323 ~~v~~G~~~~~G~lPvNtsGGlls-~Ghp~gatG~~~~~E~~~QLrG~Ag~rQV~~a~~gl~~n~G  387 (399)
T PRK06059        323 ALLRSGATTLGGRIPVNPSGGLAC-FGEAIPAQAIAQVCELTWQLRGQATGRQVEGAKVGITANQG  387 (399)
T ss_pred             HHHHCCCCCCCCCCCCCCCCCHHC-CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCC
T ss_conf             999779966799703558860211-89966157999999999997488767738986178874778


No 32 
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=99.40  E-value=2.6e-09  Score=76.90  Aligned_cols=104  Identities=17%  Similarity=0.158  Sum_probs=84.4

Q ss_pred             HCCCCEEEECCCCCCHHHHHHHHHHHHHHHCC--HHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHH
Q ss_conf             03832466559985999999999999997279--5786899994578875460058888632026877358984142035
Q gi|254781019|r   36 GIGQERMSVLNPDEDIVTMAAAAALPIMQNQD--KNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYS  113 (396)
Q Consensus        36 ~lGi~~r~v~~~~Ed~~tmA~~Aa~~~L~~~~--~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g  113 (396)
                      |.|+.+.. -.++.+..+|+++|+++||++++  ++|||.+++++..........+..+...||+. ..+..-+.++|.+
T Consensus        13 GvG~t~~g-r~~~~s~~~L~~eA~~~AL~DAGl~~~dID~~~~g~~~~~~~~~~~~~~l~~~lg~~-~~p~~~v~~~~as   90 (400)
T PRK06157         13 GMGCSKFG-ERWDAGGEDLMVEAYQEAIADAGIEPKQIEAAWFGTHYDEIGTGKSGTPLSMALRLP-NIPVTRVENFCAT   90 (400)
T ss_pred             EEEEECCC-CCCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCHHHHHHHHHCCCC-CCCEEEECCCCHH
T ss_conf             85572055-079979999999999999997399989989998981477544552579999961899-8733786477449


Q ss_pred             HHHHHHHHHHHHHCCCCCEEEEEECCCC
Q ss_conf             8889987899997399976999503320
Q gi|254781019|r  114 ATCALHMACALVAKSPERKVLIVASDVA  141 (396)
Q Consensus       114 ~~~AL~~A~~~i~sg~~~~aLVV~sD~~  141 (396)
                      +..|+..|...|++|....+||++.|..
T Consensus        91 G~~al~~A~~aI~sG~~d~vlv~g~ek~  118 (400)
T PRK06157         91 GTEAFRGAVYAVASGAYDIALALGVEKL  118 (400)
T ss_pred             HHHHHHHHHHHHHCCCCCEEEEEEEECC
T ss_conf             9999999999998098878999645425


No 33 
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=99.39  E-value=2.1e-09  Score=77.44  Aligned_cols=275  Identities=14%  Similarity=0.086  Sum_probs=150.2

Q ss_pred             HCCCCEEEECCCCCCHHHHHHHHHHHHHHHCC--HHHCCEEEEECCCCC-CCCHHHHHHHHHHHCCCCCCEEEEECCCHH
Q ss_conf             03832466559985999999999999997279--578689999457887-546005888863202687735898414203
Q gi|254781019|r   36 GIGQERMSVLNPDEDIVTMAAAAALPIMQNQD--KNLIDTLFFATESSV-DQSKSAAIWLHKLLGLNSSCRVVELKQACY  112 (396)
Q Consensus        36 ~lGi~~r~v~~~~Ed~~tmA~~Aa~~~L~~~~--~~~Id~li~~T~t~~-~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~  112 (396)
                      |.|+....-..++.+.-.|+.+|++++|++++  ++|||.++++..+.. ...--....+...||+.+ .++.-+..+|.
T Consensus         8 GvG~T~f~k~~~~~~~~~l~~eA~~~AL~DAGl~~~dIDg~v~~~~~~~~~~~~~~g~~~~~~lGl~~-~p~~~ve~~ca   86 (415)
T PRK06365          8 AGGVTKFVKASPNMDFRLRVKKAFDYAMNDAGLTLADIDGSVASYFSDHFQRQLMAGIMVQDYLGLVP-KPSKRIEGGGA   86 (415)
T ss_pred             EEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCCHHHHHHHHCCCCC-CCEEEEECCCH
T ss_conf             84236456789998899999999999999759998996988898417866421005589999718888-64257737728


Q ss_pred             HHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCC------------CC----C----------------------------
Q ss_conf             588899878999973999769995033201458------------88----7----------------------------
Q gi|254781019|r  113 SATCALHMACALVAKSPERKVLIVASDVARYDL------------GS----S----------------------------  148 (396)
Q Consensus       113 g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~~------------~~----~----------------------------  148 (396)
                      ++..|+..|...|++|....+||++.|..+...            +.    +                            
T Consensus        87 sg~~a~~~A~~~I~sG~~d~vlv~G~ek~s~~~~~~~~~~~~~~~d~~~e~p~g~~~~~~~Al~a~rym~~yG~t~e~lA  166 (415)
T PRK06365         87 TGGLAFQAGYEEIASGRMDVVAVYGFETMSHVNTWKGNEFIALASDTNFDYPIGGFYTGYYAMMAVRHMYEFGTTVEQMA  166 (415)
T ss_pred             HHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHH
T ss_conf             99999999999997087878999741145678866653111025665534545554488999999999998698899999


Q ss_pred             ---------------------------------CCC-------CCCCCEEEEEECCCCC-------CCEEEECCCCCCCC
Q ss_conf             ---------------------------------533-------4783024688426876-------30353100015678
Q gi|254781019|r  149 ---------------------------------GEP-------TQGCGAVAILISSQTS-------ILEIEDITGIYTND  181 (396)
Q Consensus       149 ---------------------------------~~~-------t~GaGA~Allv~~~~~-------~~~~~~~~~~~~~~  181 (396)
                                                       ..|       .-.|||+|+++.++..       .+.+.. .+..+..
T Consensus       167 ~Vavk~r~~A~~NP~A~~~~~iTvedvl~s~~Ia~PL~lldcc~~sDGAaAvVl~see~Ar~~~~~pV~I~g-~g~~~~~  245 (415)
T PRK06365        167 KVSVKNHGNAIHNPYAQSPMKLTVEDVRKAPMVSYPLTRLDVCAMSDGAAVAILASEDKAFEITDHPVLIKA-IGTGTDT  245 (415)
T ss_pred             HHHHHHHHHHCCCHHHHCCCCCCHHHHHCCCCCCCCCHHHCCCCCCCCEEEEEEECHHHHHHCCCCCEEEEE-EEEECCC
T ss_conf             999998775525937648888998998318844367202126888886499999458988655799779999-9971254


Q ss_pred             CCCCCCC--------CCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCH--HHCCEEEECCCCCHHHHHHHHHHCCHH
Q ss_conf             6511275--------887542356601698999999999999999629882--110123311454057888886411024
Q gi|254781019|r  182 CMDFWRP--------NYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHDF--NDFQYFCYHQPFTRMAEKAHIRLSKIV  251 (396)
Q Consensus       182 ~~df~rp--------~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~--~did~~v~H~p~~k~~~~~~~~l~~~~  251 (396)
                      ..-..||        ........+-.+....-+.....+.++..++.|+++  +|||.+-.|=+|.-+..-....+....
T Consensus       246 ~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Aa~~Ay~~AGi~~p~~DiDv~ev~D~Ft~~el~~lE~lGfc~  325 (415)
T PRK06365        246 MRLADRPFGEVPLLPNENPSDYKNLKYPGVHSFRAGRMAAKEAYERANITDPLNDLDLIELHDAYTSSEIQTYEDLGLCK  325 (415)
T ss_pred             CCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCC
T ss_conf             20034544445444456720110234554100279999999999974999961458779984576299999999849988


Q ss_pred             HHHHHHHHH---------HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH-CCC----------CCCCCEEEEEEE--CC
Q ss_conf             544100134---------55543334445323854323389999999971-574----------369888999840--79
Q gi|254781019|r  252 HQNLSVAEI---------EKAIGITTLYNRLIGNSYTASLYIALISLLDH-SSE----------NLAGKRVGFFSY--GS  309 (396)
Q Consensus       252 ~~~~~~~~~---------e~~~~~~~~~~~~~GN~~SASi~l~L~slLe~-~~~----------~~~G~rIll~sy--Gs  309 (396)
                       +......+         +-.++++-=+.. .|+...|+=...+.++..| .|+          .-++-|++|.-=  |.
T Consensus       326 -~Geg~~~v~~G~~~~~G~lPvN~sGGlls-~Ghp~GatG~~q~vE~~~QLrG~a~~r~~~~~~QV~~a~~al~~~~GG~  403 (415)
T PRK06365        326 -YGEGGQFIDEGKPELDGKIPVNPSGGLLA-AGHPVGATGIMQAVFMFWQLQHTIKKHFHDDYLQVPNAKRGLIHSHAGT  403 (415)
T ss_pred             -CCCHHHHHHCCCCCCCCCCCCCCCCCHHC-CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCC
T ss_conf             -98389999779966899712678852330-7865651399999999999617502367775456898568988357755


Q ss_pred             CCCEE
Q ss_conf             83037
Q gi|254781019|r  310 GCVAE  314 (396)
Q Consensus       310 G~~a~  314 (396)
                      |..+.
T Consensus       404 ~~~~~  408 (415)
T PRK06365        404 GTYVT  408 (415)
T ss_pred             CCEEE
T ss_conf             40179


No 34 
>PRK08256 lipid-transfer protein; Provisional
Probab=99.39  E-value=1.4e-09  Score=78.62  Aligned_cols=93  Identities=17%  Similarity=0.190  Sum_probs=74.8

Q ss_pred             CCCCCHHHHHHHHHHHHHHHCC--HHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHH
Q ss_conf             9985999999999999997279--57868999945788754600588886320268773589841420358889987899
Q gi|254781019|r   46 NPDEDIVTMAAAAALPIMQNQD--KNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACA  123 (396)
Q Consensus        46 ~~~Ed~~tmA~~Aa~~~L~~~~--~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~  123 (396)
                      ..+.+..+|+++|++.+|++++  |++||.++++...+......   .....+|+. .++++.++.+|.++..|+..|..
T Consensus        17 ~~~~~~~~L~~eA~~~AL~dAGi~~~~ID~v~~G~~~~~~~~~~---~a~~~~g~~-g~P~~tV~~~CaSG~~Ai~~Aa~   92 (391)
T PRK08256         17 GASWDYPDMAAEAGRAALADAGIDYDEVQQAYVGYVYGDSTSGQ---RALYEVGMT-GIPVVNVNNNCSTGSTALFLARQ   92 (391)
T ss_pred             CCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCHH---HHHHHCCCC-CCCEEEECCCCHHHHHHHHHHHH
T ss_conf             99999999999999999998298989989998970368750059---999961336-99658887876169999999999


Q ss_pred             HHHCCCCCEEEEEECCCCC
Q ss_conf             9973999769995033201
Q gi|254781019|r  124 LVAKSPERKVLIVASDVAR  142 (396)
Q Consensus       124 ~i~sg~~~~aLVV~sD~~~  142 (396)
                      .|++|....+|+++.|.++
T Consensus        93 ~I~sG~advvla~G~E~Ms  111 (391)
T PRK08256         93 AVASGAADCALALGFEQMQ  111 (391)
T ss_pred             HHHCCCCCEEEEEEEECCC
T ss_conf             9976998889996440357


No 35 
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=99.38  E-value=6e-10  Score=80.84  Aligned_cols=95  Identities=15%  Similarity=0.151  Sum_probs=77.8

Q ss_pred             CCCCHHHHHHHHHHHHHHHCC--HHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHH
Q ss_conf             985999999999999997279--578689999457887546005888863202687735898414203588899878999
Q gi|254781019|r   47 PDEDIVTMAAAAALPIMQNQD--KNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACAL  124 (396)
Q Consensus        47 ~~Ed~~tmA~~Aa~~~L~~~~--~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~  124 (396)
                      ++-+...|+.+|++.+|++++  |+|||.+++++.......-..+..+...+|+.. ...+-+..+|.++..|+..|...
T Consensus        17 ~~~s~~eL~~eA~~~Al~dAgl~~~dVD~v~~G~~~~~g~~~~~~~~~a~~~Gl~~-~~~~~v~~~caSG~~av~~A~~~   95 (385)
T PRK12578         17 DDVSIQELAWESIKEALEDAGITQKDVDLVVIGSTAYRGVELYPAPPVSEYSGLTG-KVPLRVEAACATGSAAAFTAYTS   95 (385)
T ss_pred             CCCCHHHHHHHHHHHHHHHHCCCHHHCCEEEEECCCCCCCCCCHHHHHHHHCCCCC-CCCEEECCCCHHHHHHHHHHHHH
T ss_conf             99799999999999999984929899599999456755522362899999759989-88668816677899999999999


Q ss_pred             HHCCCCCEEEEEECCCCC
Q ss_conf             973999769995033201
Q gi|254781019|r  125 VAKSPERKVLIVASDVAR  142 (396)
Q Consensus       125 i~sg~~~~aLVV~sD~~~  142 (396)
                      |++|....+|+++.|..+
T Consensus        96 I~sG~~dvvl~~G~e~ms  113 (385)
T PRK12578         96 IASGLADIAMAVGVDKMT  113 (385)
T ss_pred             HHHCCCCEEEEEEEEECC
T ss_conf             983859999994552057


No 36 
>PRK06363 consensus
Probab=99.37  E-value=4.3e-10  Score=81.77  Aligned_cols=249  Identities=16%  Similarity=0.149  Sum_probs=145.4

Q ss_pred             CCCCHHHHHHHHHHHHHHHCC--HHHCCEEEEECCCCCCC--CHHHHHHHHHHHCCCC-CCEEEEECCCHHHHHHHHHHH
Q ss_conf             985999999999999997279--57868999945788754--6005888863202687-735898414203588899878
Q gi|254781019|r   47 PDEDIVTMAAAAALPIMQNQD--KNLIDTLFFATESSVDQ--SKSAAIWLHKLLGLNS-SCRVVELKQACYSATCALHMA  121 (396)
Q Consensus        47 ~~Ed~~tmA~~Aa~~~L~~~~--~~~Id~li~~T~t~~~~--~~~~a~~v~~~Lgl~~-~~~~~Di~~aC~g~~~AL~~A  121 (396)
                      ++.+..+|+++|++.+|++++  |++||.+++++.+....  ....+..+...+|+.+ .+++.-++.+|.++..|+..|
T Consensus        18 ~~~s~~~L~~ea~~~Al~dAgl~~~dID~v~~g~~~~~~~~~~~~~~~~~a~~~Gl~~~~vp~~~v~~~C~SG~~Ai~~A   97 (387)
T PRK06363         18 WERSFRDLIVEAGIKAIEDANVSGEDIDAMYVGNMSGGRFVGQEHIGALIADYAGLNTLPIPATRVEAACASGGLALRQA   97 (387)
T ss_pred             CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHH
T ss_conf             99798999999999999980979899999999825754344613099999997399888765488866317999999999


Q ss_pred             HHHHHCCCCCEEEEEECCCCCCCCCCCC----------C-----------------------------------------
Q ss_conf             9999739997699950332014588875----------3-----------------------------------------
Q gi|254781019|r  122 CALVAKSPERKVLIVASDVARYDLGSSG----------E-----------------------------------------  150 (396)
Q Consensus       122 ~~~i~sg~~~~aLVV~sD~~~~~~~~~~----------~-----------------------------------------  150 (396)
                      ...|++|....+|+.+.|..+..+....          +                                         
T Consensus        98 a~~I~sG~~dvvlagG~E~ms~~~~~~~~~~~~~d~~~~~~~g~~~~~~~a~~a~~~~~~yG~tre~~a~~A~~s~~~A~  177 (387)
T PRK06363         98 VLAVASGYHDIVLAAGVEKMTDVGDATSALATAADREWEAFVGATFPSLYAMIAKRHMHEYGTTREQLAQVAVKNHENGA  177 (387)
T ss_pred             HHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf             99997499868999601367788765542222445352001377518999999999999979699999999998166454


Q ss_pred             ------------------------C-------CCCCCEEEEEECCCCC-------CCEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf             ------------------------3-------4783024688426876-------3035310001567865112758875
Q gi|254781019|r  151 ------------------------P-------TQGCGAVAILISSQTS-------ILEIEDITGIYTNDCMDFWRPNYRR  192 (396)
Q Consensus       151 ------------------------~-------t~GaGA~Allv~~~~~-------~~~~~~~~~~~~~~~~df~rp~~~~  192 (396)
                                              |       .-.|||+|+++.+...       ++.+.. .+..+....-..+|.   
T Consensus       178 ~np~a~~~~~~t~d~~~~~~~i~~pl~~~d~s~~sDGAaAvvl~s~e~A~~~~~~pv~i~g-~~~~~~~~~~~~~~~---  253 (387)
T PRK06363        178 KNPYAQFRNEITVDQVLNSSMVADPLRLLDCSPVSDGAAAVIVCPAEKAREYTDTPIYIKA-SAQASDTIALHDRKD---  253 (387)
T ss_pred             CCCCCCCCCCCCHHHHCCCCCCCCCCHHHHCCCCCCCCEEEEECCHHHHHHCCCCCEEEEE-EEEEECCCCCCCCCC---
T ss_conf             2850015787547552266656665315552466888348997159999865999579999-999835544567886---


Q ss_pred             CEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHH---------HH
Q ss_conf             423566016989999999999999996298821101233114540578888864110245441001345---------55
Q gi|254781019|r  193 TALVDGKYSTKIYLQSLEAVWHDYQKNKGHDFNDFQYFCYHQPFTRMAEKAHIRLSKIVHQNLSVAEIE---------KA  263 (396)
Q Consensus       193 ~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~~did~~v~H~p~~k~~~~~~~~l~~~~~~~~~~~~~e---------~~  263 (396)
                        .+        .+.....+.++.++++|++++|||.+=.|-+|..+.....+.+... .+......++         .+
T Consensus       254 --~~--------~~~~~~~a~~~a~~~AGl~~~DiD~~Ei~eaFa~~~l~~~e~lGl~-~~ge~~~~~~~g~~~~~g~~p  322 (387)
T PRK06363        254 --IT--------TLDATVVASKKAYEMAGLTPKDIDVAEVHDCFTIAELCAIEDLGFC-KKGEAGKVTEEGKTAIGGDIP  322 (387)
T ss_pred             --CC--------CCCHHHHHHHHHHHHHCCCHHHCCEEEECCCCHHHHHHHHHHCCCC-CCCCHHHHHHCCCCCCCCCCC
T ss_conf             --44--------5771699999999984999888757641110168899999981998-566157898768854599960


Q ss_pred             HHHHHHHHHHCCCCCCCH---HHHHHHHHHHH-C-CCCCCCCEEEEEEECCCC
Q ss_conf             433344453238543233---89999999971-5-743698889998407983
Q gi|254781019|r  264 IGITTLYNRLIGNSYTAS---LYIALISLLDH-S-SENLAGKRVGFFSYGSGC  311 (396)
Q Consensus       264 ~~~~~~~~~~~GN~~SAS---i~l~L~slLe~-~-~~~~~G~rIll~syGsG~  311 (396)
                      ++++-=.. -.|+-..+|   +...+...|.. + ++..++-+++++.=..|.
T Consensus       323 vN~~GG~i-a~GHP~gatG~~~~~e~~~qLrg~ag~~qv~~~~~gl~~~~GG~  374 (387)
T PRK06363        323 VNPSGGLK-ACGHPVGATGIKQVVEIVWQLRGDAGKRQVDGAEIGMTHNVGGT  374 (387)
T ss_pred             EECCHHHH-HCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCH
T ss_conf             71786798-76982317899999999999834213118777778988768866


No 37 
>PRK06364 consensus
Probab=99.34  E-value=1.2e-09  Score=78.88  Aligned_cols=252  Identities=14%  Similarity=0.181  Sum_probs=147.7

Q ss_pred             CCCCHHHHHHHHHHHHHHHCC--HHHCCEEEEECCCCC--CCCHHHHHHHHHHHCCCCC-CEEEEECCCHHHHHHHHHHH
Q ss_conf             985999999999999997279--578689999457887--5460058888632026877-35898414203588899878
Q gi|254781019|r   47 PDEDIVTMAAAAALPIMQNQD--KNLIDTLFFATESSV--DQSKSAAIWLHKLLGLNSS-CRVVELKQACYSATCALHMA  121 (396)
Q Consensus        47 ~~Ed~~tmA~~Aa~~~L~~~~--~~~Id~li~~T~t~~--~~~~~~a~~v~~~Lgl~~~-~~~~Di~~aC~g~~~AL~~A  121 (396)
                      ++.+..+|+++|++.+|++++  ++|||.+++++....  ......+..+...+|+.+. ++++-+..+|.++..|+..|
T Consensus        21 ~~~s~~~L~~eA~~~Al~dAgl~~~dID~v~~~~~~~g~~~~~~~~~~~~a~~~gl~~~~vp~~~V~~~caSG~~Ai~~A  100 (389)
T PRK06364         21 WDKSLRDLAVEAGLEAIKDANIYSKDLQMLYASNSLAGTINEQSNIAALAADFSGIAEEHVPAVRVEASTASGGAAVREA  100 (389)
T ss_pred             CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHH
T ss_conf             99798999999999999880989899899988156665556524399999997599855886699887017899999999


Q ss_pred             HHHHHCCCCCEEEEEECCCCCCCCCC------------CC----------------------------------------
Q ss_conf             99997399976999503320145888------------75----------------------------------------
Q gi|254781019|r  122 CALVAKSPERKVLIVASDVARYDLGS------------SG----------------------------------------  149 (396)
Q Consensus       122 ~~~i~sg~~~~aLVV~sD~~~~~~~~------------~~----------------------------------------  149 (396)
                      ...|++|....+|+++.|..+...+.            ..                                        
T Consensus       101 ~~~I~sG~~d~vla~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~al~a~~y~~~~g~~~e~~a~va~~~~~~  180 (389)
T PRK06364        101 YLAIKSGEYDVVMVGGVEKMTDIYGHEIIDVQSSILDREWESFNGATPAAMAAIIARRYMHDFNVEREAISMIAVNDHAN  180 (389)
T ss_pred             HHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf             99997297778999610003567776544445433330023303548999999999999999696999999999976563


Q ss_pred             -------------------------CC-------CCCCCEEEEEECCCCCC-------CEEEECCCCCCCCCCCCCCCCC
Q ss_conf             -------------------------33-------47830246884268763-------0353100015678651127588
Q gi|254781019|r  150 -------------------------EP-------TQGCGAVAILISSQTSI-------LEIEDITGIYTNDCMDFWRPNY  190 (396)
Q Consensus       150 -------------------------~~-------t~GaGA~Allv~~~~~~-------~~~~~~~~~~~~~~~df~rp~~  190 (396)
                                               +|       .-.|||+|+++.++...       +.+.. .+. ..+....    +
T Consensus       181 A~~nP~A~~r~~~t~e~vl~s~~i~~Pl~~~d~s~~~DGAaAvVl~s~e~a~~~~~~~v~i~~-~~~-~~~~~~~----~  254 (389)
T PRK06364        181 ASRNPDAQYRNKITVKQVMNSDPVAEPLNVFDCSPISDGASAIILASEDFVKKNRKDGVRILS-SAM-AEDYLAL----H  254 (389)
T ss_pred             HHHCCCCCCCCCCCHHHHHCCCCCCCCCCHHHCCCCCCCEEEEEEECHHHHHHCCCCCEEEEE-EEE-ECCCCCC----C
T ss_conf             761960111577678886236876787607445778883179999338999756899759999-999-6245555----7


Q ss_pred             CCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHH--------
Q ss_conf             754235660169899999999999999962988211012331145405788888641102454410013455--------
Q gi|254781019|r  191 RRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHDFNDFQYFCYHQPFTRMAEKAHIRLSKIVHQNLSVAEIEK--------  262 (396)
Q Consensus       191 ~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~~did~~v~H~p~~k~~~~~~~~l~~~~~~~~~~~~~e~--------  262 (396)
                      ...+..        -+.....+.+..++++|++++|||.+-.|=+|.-+.....+.+..... ......++.        
T Consensus       255 ~~~~~~--------~~~~~~~A~~~A~~~AGl~~~DIDl~Ei~DaFa~~~l~~le~lG~~~~-Ge~~~~~~~~~~~~G~~  325 (389)
T PRK06364        255 SRKSIY--------TLESTKIAARLALDRAGIKSDDVSFLELNDSYSIYGLLELEDLGFAEK-GKAKDLVYDEIKLNGRL  325 (389)
T ss_pred             CCCCCC--------CCCCHHHHHHHHHHHHCCCHHHCCEEEECCCCHHHHHHHHHHCCCCCC-CCHHHHHCCCCCCCCCC
T ss_conf             778654--------454089999999998199978861775226554999999998099987-73144315874469984


Q ss_pred             HHHHHHHHHHHCCCCCCCHHHHHHHHHHHH----C-CCCCCCCEEEEEE--ECCCCCEE
Q ss_conf             543334445323854323389999999971----5-7436988899984--07983037
Q gi|254781019|r  263 AIGITTLYNRLIGNSYTASLYIALISLLDH----S-SENLAGKRVGFFS--YGSGCVAE  314 (396)
Q Consensus       263 ~~~~~~~~~~~~GN~~SASi~l~L~slLe~----~-~~~~~G~rIll~s--yGsG~~a~  314 (396)
                      +++++-=... .||...||=...+.+++.|    + ++..++-|+.+..  -|.|..+.
T Consensus       326 pvN~~GG~la-~Ghp~gatG~~~~~ea~~QLrg~ag~rQv~~a~~al~~~~gG~g~~~~  383 (389)
T PRK06364        326 PVNPSGGLKA-KGNPLGATGVSQFVEAYLQLKGKAGQRQVKSARYGLLHNMAGTGATSV  383 (389)
T ss_pred             EECCCCCHHH-CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCEEE
T ss_conf             3738817876-799300679999999999970211034678866999816774421079


No 38 
>PRK06158 thiolase; Provisional
Probab=99.33  E-value=1.6e-09  Score=78.13  Aligned_cols=192  Identities=15%  Similarity=0.013  Sum_probs=120.7

Q ss_pred             HCCCCEEEECCCCCCHHHHHHHHHHHHHHHCC--HHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHH
Q ss_conf             03832466559985999999999999997279--5786899994578875460058888632026877358984142035
Q gi|254781019|r   36 GIGQERMSVLNPDEDIVTMAAAAALPIMQNQD--KNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYS  113 (396)
Q Consensus        36 ~lGi~~r~v~~~~Ed~~tmA~~Aa~~~L~~~~--~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g  113 (396)
                      |.|+....- .++.+..+|+++|++++|++++  ++|||.+++++...  ..  ....+.+.||+.+ .....+..+|.+
T Consensus        14 GvG~t~fg~-~~~~s~~eL~~eA~~~Al~DAGi~~~dID~~~~g~~~~--~~--~g~~~a~~lGl~~-~~~~~~~~ggas   87 (384)
T PRK06158         14 GAATAGLGE-APGLSAMELLAQAAVRALADAGLTMADVDGLFTASPDS--AL--WGLSVAEYLGIRP-RFVDGTMIGGSS   87 (384)
T ss_pred             EEEECCCCC-CCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCC--CC--HHHHHHHHCCCCC-CEECCCCCCCHH
T ss_conf             755513501-89979999999999999997599999909899971576--65--3999999829998-124366668689


Q ss_pred             HHHHHHHHHHHHHCCCCCEEEEEECCCCCCCC-------C-----------CC---------------------------
Q ss_conf             88899878999973999769995033201458-------8-----------87---------------------------
Q gi|254781019|r  114 ATCALHMACALVAKSPERKVLIVASDVARYDL-------G-----------SS---------------------------  148 (396)
Q Consensus       114 ~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~~-------~-----------~~---------------------------  148 (396)
                      +..+|..|...|++|..+.+||+..+..+...       +           .+                           
T Consensus        88 ~~~al~~A~~aI~sG~~d~vlV~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~p~~~~Al~a~rym~~yG~t~E~lA~vav  167 (384)
T PRK06158         88 FVSHLLPAALALEAGLCDVALICYGSNQRSAGGKLVSMLDPQPYEAPYKPVNPVTAYALAAARHMHQYGTTREQLAEVAV  167 (384)
T ss_pred             HHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH
T ss_conf             99999999999985885389995235555566554335687444432355546889999999999997988999999999


Q ss_pred             --------------------------------CC----CCCCCCEEEEEECCCCCC-------CEEEECCCCCCCCCCCC
Q ss_conf             --------------------------------53----347830246884268763-------03531000156786511
Q gi|254781019|r  149 --------------------------------GE----PTQGCGAVAILISSQTSI-------LEIEDITGIYTNDCMDF  185 (396)
Q Consensus       149 --------------------------------~~----~t~GaGA~Allv~~~~~~-------~~~~~~~~~~~~~~~df  185 (396)
                                                      .+    ..-.|||+|+++.+...-       +.+. ..+..+    +.
T Consensus       168 k~r~nA~~NP~A~~r~~it~edvl~s~~Ia~PL~l~dc~~~sDGAaAvVl~s~e~Ar~l~~~pV~i~-g~g~~~----~~  242 (384)
T PRK06158        168 AARQWAQLNPEAFMRDPLTIDDVLAARMVSDPLSVRDCCLVTDGAGAVVMVRADRARDLPRPPVYVL-GAAAAT----WH  242 (384)
T ss_pred             HHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCHHHCCCCCCCCCEEEEEEECHHHHHHCCCCCEEEE-EEEEEC----CC
T ss_conf             9999870698631378879999721535456600114665666348999952888844799957999-999861----68


Q ss_pred             CCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCCHHHHHHHHHHC
Q ss_conf             275887542356601698999999999999999629882110123311454057888886411
Q gi|254781019|r  186 WRPNYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHDFNDFQYFCYHQPFTRMAEKAHIRLS  248 (396)
Q Consensus       186 ~rp~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~~did~~v~H~p~~k~~~~~~~~l~  248 (396)
                      ......  +    ..    .......+.++..++.|++++|||.+-+|-+|.-+..-....+.
T Consensus       243 ~~~~~~--~----d~----~~~~~~~aa~~A~~~AGi~p~DiDvaev~D~Ft~~~l~~~E~lG  295 (384)
T PRK06158        243 RQISSM--P----DL----TVTAAAESGPRAFAMAGVTPADIDVVELYDAFTINTILFLEDLG  295 (384)
T ss_pred             CCCCCC--C----CC----CHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCHHHHHHHHHHCC
T ss_conf             764335--5----21----02799999999999809997778788641776088999999849


No 39 
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=99.32  E-value=2.1e-09  Score=77.52  Aligned_cols=98  Identities=16%  Similarity=0.191  Sum_probs=84.8

Q ss_pred             CCCCHHHHHHHHHHHHHHHC--CHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHH
Q ss_conf             98599999999999999727--9578689999457887546005888863202687735898414203588899878999
Q gi|254781019|r   47 PDEDIVTMAAAAALPIMQNQ--DKNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACAL  124 (396)
Q Consensus        47 ~~Ed~~tmA~~Aa~~~L~~~--~~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~  124 (396)
                      .+..+.+|++.|++.+|+++  +|++||.|++++..+.......+-.+.-..|++.+++++-++++|.++..|+..|...
T Consensus        18 ~~~~~~~L~~~ai~~al~~agl~~~~Id~vi~G~~~~~g~g~n~aR~~al~aGlp~~vp~~tV~~aCaSG~~Ai~~A~~~   97 (386)
T cd00751          18 KDVSADDLGAAVIKALLERAGLDPEEVDDVIMGNVLQAGEGQNPARQAALLAGLPESVPATTVNRVCGSGLQAVALAAQS   97 (386)
T ss_pred             CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHH
T ss_conf             88989999999999999984989899998999950666656639999999769998886588842216879999999741


Q ss_pred             HHCCCCCEEEEEECCCCCCC
Q ss_conf             97399976999503320145
Q gi|254781019|r  125 VAKSPERKVLIVASDVARYD  144 (396)
Q Consensus       125 i~sg~~~~aLVV~sD~~~~~  144 (396)
                      |++|....+|+++.|.++..
T Consensus        98 I~sG~~dvvla~GvEsmS~~  117 (386)
T cd00751          98 IAAGEADVVVAGGVESMSRA  117 (386)
T ss_pred             HCCCCCCEEEEECCCCCCCC
T ss_conf             10799778887244535657


No 40 
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=99.32  E-value=4.4e-09  Score=75.47  Aligned_cols=100  Identities=11%  Similarity=0.026  Sum_probs=76.0

Q ss_pred             EECCCCCCHHHHHHHHHHHHHHHCC--HHHCCEEEEECCCCCCCCH--HHHHHHHH-HHCCCCCCEEEEECCCHHHHHHH
Q ss_conf             6559985999999999999997279--5786899994578875460--05888863-20268773589841420358889
Q gi|254781019|r   43 SVLNPDEDIVTMAAAAALPIMQNQD--KNLIDTLFFATESSVDQSK--SAAIWLHK-LLGLNSSCRVVELKQACYSATCA  117 (396)
Q Consensus        43 ~v~~~~Ed~~tmA~~Aa~~~L~~~~--~~~Id~li~~T~t~~~~~~--~~a~~v~~-~Lgl~~~~~~~Di~~aC~g~~~A  117 (396)
                      +...++.+..+|+++|++++|++++  |+|||.++++...+.....  .....+.. ..++ ..++.+-+..+|.++..|
T Consensus        18 ~~~~~~~~~~~L~~eA~~~Al~dAGl~~~dID~v~~G~~~~~~~~~~~~~g~~~~~~~~~~-~~~p~~~v~~~caSG~~A   96 (408)
T PRK06289         18 NWTKEGRDFADLTREVVDGTLAAAGIDADDIGVVHVGNFFGELFAGQGHLGAMPATVHPAL-WGTPASRHEAACASGSVA   96 (408)
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCCHHHHHHHHHHCCC-CCCCCEEECCCCHHHHHH
T ss_conf             8887899999999999999999849998998999997415643445102566788764212-588614463523899999


Q ss_pred             HHHHHHHHHCCCCCEEEEEECCCCCC
Q ss_conf             98789999739997699950332014
Q gi|254781019|r  118 LHMACALVAKSPERKVLIVASDVARY  143 (396)
Q Consensus       118 L~~A~~~i~sg~~~~aLVV~sD~~~~  143 (396)
                      +..|...|++|....+|+++.|..+.
T Consensus        97 ~~~A~~~I~sG~~dvvla~G~e~ms~  122 (408)
T PRK06289         97 TLAAIADLRSGAYDVALVVGLELEKT  122 (408)
T ss_pred             HHHHHHHHHCCCCCEEEEEEEEECCC
T ss_conf             99999999748887799988886267


No 41 
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=99.31  E-value=1.5e-08  Score=72.11  Aligned_cols=95  Identities=16%  Similarity=0.188  Sum_probs=77.8

Q ss_pred             CCCCCHHHHHHHHHHHHHHHCC--HHHCCEEEEECCCCCCC-CHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHH
Q ss_conf             9985999999999999997279--57868999945788754-60058888632026877358984142035888998789
Q gi|254781019|r   46 NPDEDIVTMAAAAALPIMQNQD--KNLIDTLFFATESSVDQ-SKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMAC  122 (396)
Q Consensus        46 ~~~Ed~~tmA~~Aa~~~L~~~~--~~~Id~li~~T~t~~~~-~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~  122 (396)
                      .++.+...|+++|+++||++++  ++|||.+++++...... ......++.+.||+. ..+.+.+..+|..+..++..|.
T Consensus        20 ~~~~s~~~L~~eA~~~Al~DAGl~~~dID~~~~g~~~~~~~g~~~~~~~~~~~lG~~-~~p~~~v~~~~asg~~a~~~A~   98 (391)
T PRK08313         20 RQDVSMAGLVREAIDRALADAGLTFDDIDAVVVGKAPDFFEGVMMPELFLADAIGAT-GKPLIRVHTAGSVGGSTAVVAA   98 (391)
T ss_pred             CCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCCCCCCCCCCHHHHHHHHHCCC-CCCEEEEECCHHHHHHHHHHHH
T ss_conf             999799999999999999974999899899999765764555435578999970787-8843788253178999999999


Q ss_pred             HHHHCCCCCEEEEEECCCC
Q ss_conf             9997399976999503320
Q gi|254781019|r  123 ALVAKSPERKVLIVASDVA  141 (396)
Q Consensus       123 ~~i~sg~~~~aLVV~sD~~  141 (396)
                      ..|++|..+.+||++.|..
T Consensus        99 ~aI~sG~~d~vlv~g~ek~  117 (391)
T PRK08313         99 SLVQSGKYRRVLAVAWEKQ  117 (391)
T ss_pred             HHHHCCCCCEEEEEEEECC
T ss_conf             9997488778999874035


No 42 
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=99.31  E-value=7.6e-10  Score=80.20  Aligned_cols=96  Identities=20%  Similarity=0.224  Sum_probs=80.5

Q ss_pred             CCCCHHHHHHHHHHHHHHHCC--HHHCCEEEEECCCCCCC--CHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHH
Q ss_conf             985999999999999997279--57868999945788754--60058888632026877358984142035888998789
Q gi|254781019|r   47 PDEDIVTMAAAAALPIMQNQD--KNLIDTLFFATESSVDQ--SKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMAC  122 (396)
Q Consensus        47 ~~Ed~~tmA~~Aa~~~L~~~~--~~~Id~li~~T~t~~~~--~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~  122 (396)
                      .+....+|+++|++.+|++++  |++||.+++++..+...  ..-.+..+...+|++ +++++.++.+|.++..|+..|.
T Consensus        18 ~~~~~~dL~~~a~~~al~~agl~~~~ID~vi~G~~~~g~~~~~~~~a~~~a~~~Gl~-~~p~~~v~~~c~SG~~Ai~~Aa   96 (389)
T PRK06064         18 WDVSLRDLAVEAGLEALEDAGIDGKDIDAMYVGNMSGGRFVGQEHIAALIADYAGLA-PIPATRVEAACASGGAAVRQAY   96 (389)
T ss_pred             CCCCHHHHHHHHHHHHHHHHCCCHHHCCEEEEEECCCCCCCCCCCHHHHHHHHCCCC-CCCEEEEECCCHHHHHHHHHHH
T ss_conf             997999999999999999809498995999998127664343240999999975999-9866899375367999999999


Q ss_pred             HHHHCCCCCEEEEEECCCCCC
Q ss_conf             999739997699950332014
Q gi|254781019|r  123 ALVAKSPERKVLIVASDVARY  143 (396)
Q Consensus       123 ~~i~sg~~~~aLVV~sD~~~~  143 (396)
                      ..|++|..+.+|+.+.|..+.
T Consensus        97 ~~I~sG~~dvvlagG~E~ms~  117 (389)
T PRK06064         97 LAVASGEADVVLAAGVEKMTD  117 (389)
T ss_pred             HHHHCCCCCEEEEECCCCCCC
T ss_conf             999739998999944223577


No 43 
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=99.30  E-value=2.6e-09  Score=76.90  Aligned_cols=96  Identities=15%  Similarity=0.164  Sum_probs=72.8

Q ss_pred             CCCCHHHHHHHHHHHHHHHCC--HHHCCEEEEECCCCCCCC-HHHHHHHHH-HHCCCCCCEEEEECCCHHHHHHHHHHHH
Q ss_conf             985999999999999997279--578689999457887546-005888863-2026877358984142035888998789
Q gi|254781019|r   47 PDEDIVTMAAAAALPIMQNQD--KNLIDTLFFATESSVDQS-KSAAIWLHK-LLGLNSSCRVVELKQACYSATCALHMAC  122 (396)
Q Consensus        47 ~~Ed~~tmA~~Aa~~~L~~~~--~~~Id~li~~T~t~~~~~-~~~a~~v~~-~Lgl~~~~~~~Di~~aC~g~~~AL~~A~  122 (396)
                      ++.+..+|+++|++.+|++++  |++||.|++++...-... ...+..+.. ..++ ...+++-++.+|.++..|+..|.
T Consensus        18 ~~~s~~~L~~~A~~~Al~dAgl~~~dID~v~~G~~~~g~~~~~~~~~~~~~~~~~l-~~~p~~~v~~~caSG~~ai~~Aa   96 (389)
T PRK07516         18 DAETLESLIVRVAREALADAGIAAGDVDGIFLGHFNAGFSPQDFTASLVLQADPAL-RFKPATRVENACATGSAAVYAAI   96 (389)
T ss_pred             CCCCHHHHHHHHHHHHHHHHCCCHHHCCEEEEEECCCCCCCCHHHHHHHHHHCCCC-CCCCEEEECCCCHHHHHHHHHHH
T ss_conf             99899999999999999996909899399999824744464329999999736755-68755998787679999999999


Q ss_pred             HHHHCCCCCEEEEEECCCCCC
Q ss_conf             999739997699950332014
Q gi|254781019|r  123 ALVAKSPERKVLIVASDVARY  143 (396)
Q Consensus       123 ~~i~sg~~~~aLVV~sD~~~~  143 (396)
                      ..|++|..+.+|+++.|.++.
T Consensus        97 ~~I~sG~~dvvl~~G~e~ms~  117 (389)
T PRK07516         97 DAIESGRARIVLVVGAEKMTA  117 (389)
T ss_pred             HHHHCCCCCEEEEEEECCCCC
T ss_conf             999759888999998710467


No 44 
>PRK06065 acetyl-CoA acetyltransferase; Provisional
Probab=99.29  E-value=4.5e-09  Score=75.39  Aligned_cols=257  Identities=16%  Similarity=0.069  Sum_probs=146.9

Q ss_pred             HCCCCEEEECCCCCCHHHHHHHHHHHHHHHCC--HHHCCEEEEECCCCCCCC--HHHHHHHHHHHCCCCCCEEEEECCCH
Q ss_conf             03832466559985999999999999997279--578689999457887546--00588886320268773589841420
Q gi|254781019|r   36 GIGQERMSVLNPDEDIVTMAAAAALPIMQNQD--KNLIDTLFFATESSVDQS--KSAAIWLHKLLGLNSSCRVVELKQAC  111 (396)
Q Consensus        36 ~lGi~~r~v~~~~Ed~~tmA~~Aa~~~L~~~~--~~~Id~li~~T~t~~~~~--~~~a~~v~~~Lgl~~~~~~~Di~~aC  111 (396)
                      |.|+.... -.++++..+|+++|+++||++++  ++|||.+++++. +..+.  .-...++.+.+|+. ..+...+..+|
T Consensus        16 G~G~T~f~-r~~~~s~~eL~~eA~~~Al~DAGl~~~dID~~~~g~~-~~~~~g~~~~~~~~~~~~g~~-~~p~~~v~~~~   92 (393)
T PRK06065         16 GAGMTLFR-RRMLETPQELAWEAARQALDEAGLELKDIDCVVIGSA-PDAFDGVHMKGEYLAHGSGGI-RKPVSRVFVGG   92 (393)
T ss_pred             EEEEECCC-CCCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEECC-CCCCCCCCCHHHHHHHHCCCC-CCCEEEEECCC
T ss_conf             86570126-7899999999999999999984999899899999556-765454320368999754777-88447874452


Q ss_pred             HHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCC-----------CCCC---------------------------C---
Q ss_conf             3588899878999973999769995033201458-----------8875---------------------------3---
Q gi|254781019|r  112 YSATCALHMACALVAKSPERKVLIVASDVARYDL-----------GSSG---------------------------E---  150 (396)
Q Consensus       112 ~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~~-----------~~~~---------------------------~---  150 (396)
                      .++..++..|...|++|....+||++.|..+...           +...                           |   
T Consensus        93 asg~~a~~~A~~~I~sG~~d~vlvvg~ek~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~Al~a~rym~~yG~t~E~lA  172 (393)
T PRK06065         93 ATGVMVPIAGWYHVASGLCKKVLAVAEEKMSPARPHPQSVFRYIWDPILEKPLNPNLIWIFAMEMHRYMHVCGVKKEDIA  172 (393)
T ss_pred             HHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHH
T ss_conf             78899999999998678776899987404688876631466630350113667886799999999999998499999999


Q ss_pred             -----------------------------------C-------CCCCCEEEEEECCCCC-------CCEEEECCCCCCCC
Q ss_conf             -----------------------------------3-------4783024688426876-------30353100015678
Q gi|254781019|r  151 -----------------------------------P-------TQGCGAVAILISSQTS-------ILEIEDITGIYTND  181 (396)
Q Consensus       151 -----------------------------------~-------t~GaGA~Allv~~~~~-------~~~~~~~~~~~~~~  181 (396)
                                                         |       .-.|||+|+++.++..       ...+.. .+... +
T Consensus       173 ~Vav~~r~~A~~NP~A~~r~~~t~edvl~S~~Ia~PL~l~Dc~~~sDGAaAvVl~s~e~A~~l~~~pv~I~g-~g~~~-~  250 (393)
T PRK06065        173 LVSVKNKRNALNNPYAQLAANITVEDVLNSEVLVWPVQLLDVSPVSDGAAAMVLASEDVARRYTDTPVWVEG-VGWTL-D  250 (393)
T ss_pred             HHHHHHHHHHHHCCHHHCCCCCCHHHHCCCCCCHHCCCHHHCCCCCCCEEEEEEECHHHHHHCCCCCEEEEE-EEEEC-C
T ss_conf             999999998744929664799996886047412213242531887882189999448999756899789999-99743-6


Q ss_pred             CCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCH--HHCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHH
Q ss_conf             6511275887542356601698999999999999999629882--11012331145405788888641102454410013
Q gi|254781019|r  182 CMDFWRPNYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHDF--NDFQYFCYHQPFTRMAEKAHIRLSKIVHQNLSVAE  259 (396)
Q Consensus       182 ~~df~rp~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~--~did~~v~H~p~~k~~~~~~~~l~~~~~~~~~~~~  259 (396)
                      .. .|..  .+.          .+......+.+...++.|++.  +|||.+-.|-+|.-+..-....+.... +......
T Consensus       251 ~~-~~~~--~d~----------~~~~~~~~aa~~Ay~~AGi~~p~~DiDv~evyD~Ft~~el~~lE~lGfc~-~Ge~~~~  316 (393)
T PRK06065        251 NT-EWTN--RDL----------AYPRYVEFAARMAYKMAGIERPRKEIDVAEPYDPFDYKELHHIEGLMLAK-RGEAPKL  316 (393)
T ss_pred             CC-CCCC--CCC----------CCCHHHHHHHHHHHHHCCCCCCHHCCCEEEEECCCCHHHHHHHHHCCCCC-CCCHHHH
T ss_conf             76-6454--553----------32179999999999976999972007379850675088999999849998-9837999


Q ss_pred             HHH---------HHHHHHHHHHHCCCCCCCHHHHHHHHHHHH----C-CCCCCC-CEEEEEEECCCCC
Q ss_conf             455---------543334445323854323389999999971----5-743698-8899984079830
Q gi|254781019|r  260 IEK---------AIGITTLYNRLIGNSYTASLYIALISLLDH----S-SENLAG-KRVGFFSYGSGCV  312 (396)
Q Consensus       260 ~e~---------~~~~~~~~~~~~GN~~SASi~l~L~slLe~----~-~~~~~G-~rIll~syGsG~~  312 (396)
                      +++         .++++-=.. -.||...++=...+.++..|    + ++..++ .|++|..=..|+.
T Consensus       317 v~~G~~~~~G~lPvNtsGGll-s~Ghp~gatG~~~~~Ea~~QLrG~Ag~rQV~~~~~~gl~~~~Gg~~  383 (393)
T PRK06065        317 LKEGVFDRDGDIPSSPSGGLL-GVGNPIAAAGLMKVISIYWQLKGTAGKMQVKKPVHTGVAQAWGDLM  383 (393)
T ss_pred             HHCCCCCCCCCCCCCCCCCHH-CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCH
T ss_conf             977995679971353897100-2888561569999999999965776777479987789981667500


No 45 
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=99.29  E-value=9.5e-10  Score=79.59  Aligned_cols=98  Identities=12%  Similarity=0.098  Sum_probs=79.3

Q ss_pred             CCCCHHHHHHHHHHHHHHHCC--HHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHH
Q ss_conf             985999999999999997279--578689999457887546005888863202687735898414203588899878999
Q gi|254781019|r   47 PDEDIVTMAAAAALPIMQNQD--KNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACAL  124 (396)
Q Consensus        47 ~~Ed~~tmA~~Aa~~~L~~~~--~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~  124 (396)
                      .+..+.+|++.|++.+|++++  |++||.|+++...+.......+-...-..++...++++-++.+|.++..|+..|...
T Consensus        19 ~~~~a~eL~~~ai~~al~~agi~~~~Id~vi~G~~~~~g~g~n~ar~~~l~ag~~~~vp~~tV~~~CaSG~~Ai~~A~~~   98 (393)
T cd00826          19 ANDLAHEAGAKAIAAALEPAGVAAGAVEEACLGQVLGAGEGQNCAQQAAMHAGGLQEAPAIGMNNLCGSGLRALALAMQL   98 (393)
T ss_pred             CCCCHHHHHHHHHHHHHHHHCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHH
T ss_conf             78999999999999999982969899898999925875555419999999759998997688768478999999999999


Q ss_pred             HHCCCCCEEEEEECCCCCCC
Q ss_conf             97399976999503320145
Q gi|254781019|r  125 VAKSPERKVLIVASDVARYD  144 (396)
Q Consensus       125 i~sg~~~~aLVV~sD~~~~~  144 (396)
                      |++|....+|+++.|.++..
T Consensus        99 I~sG~~dvvlagGvEsms~~  118 (393)
T cd00826          99 IAGGDANCILAGGFEKMETS  118 (393)
T ss_pred             HHCCCCCEEEEEEEEECCCC
T ss_conf             97699998999505506767


No 46 
>PRK07800 consensus
Probab=99.28  E-value=7.8e-10  Score=80.14  Aligned_cols=99  Identities=11%  Similarity=0.113  Sum_probs=85.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHCC--HHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHH
Q ss_conf             985999999999999997279--578689999457887546005888863202687735898414203588899878999
Q gi|254781019|r   47 PDEDIVTMAAAAALPIMQNQD--KNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACAL  124 (396)
Q Consensus        47 ~~Ed~~tmA~~Aa~~~L~~~~--~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~  124 (396)
                      .+..+.+|++.+++.+|++.+  |++||.|+++.........-.+-.+.-..|++.+++++.++.+|.++..|+..|...
T Consensus        22 ~~~~~~~L~~~~i~~~l~~~gl~p~~Id~vi~G~v~~~g~g~n~aR~~~l~aglp~~vp~~tV~~~CaSGl~Ai~~A~~~  101 (393)
T PRK07800         22 KDFSASDLGGIAIKAALEKAGVAADQVDYVIMGQVLQAGAGQIPARQAAVAAGIPMDVPALTINKVCLSGLDAIALADQL  101 (393)
T ss_pred             CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHH
T ss_conf             99988999999999999974999899898999924766766509999999769898885699945013799999999999


Q ss_pred             HHCCCCCEEEEEECCCCCCCC
Q ss_conf             973999769995033201458
Q gi|254781019|r  125 VAKSPERKVLIVASDVARYDL  145 (396)
Q Consensus       125 i~sg~~~~aLVV~sD~~~~~~  145 (396)
                      |++|....+|+++.|..+..+
T Consensus       102 I~~G~~dvvlagGvEsmS~~P  122 (393)
T PRK07800        102 IRAGEFDVVVAGGQESMTQAP  122 (393)
T ss_pred             HHCCCCCEEEEEEEECCCCCC
T ss_conf             867998667898520245475


No 47 
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=99.27  E-value=5.1e-10  Score=81.31  Aligned_cols=98  Identities=9%  Similarity=0.124  Sum_probs=84.2

Q ss_pred             CCCCHHHHHHHHHHHHHHHCC--HHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHH
Q ss_conf             985999999999999997279--578689999457887546005888863202687735898414203588899878999
Q gi|254781019|r   47 PDEDIVTMAAAAALPIMQNQD--KNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACAL  124 (396)
Q Consensus        47 ~~Ed~~tmA~~Aa~~~L~~~~--~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~  124 (396)
                      .+..+.+|++.+++.+|++.+  |++||.+++++........-.+-.+....|++..++++.++.+|.+++.|+.+|...
T Consensus        22 ~~~~~~dL~~~a~~~~l~r~~l~~~~Id~vi~G~~~~~g~g~~~aR~~~l~aGlp~~vp~~tV~~~CaSGl~Ai~~A~~~  101 (393)
T PRK08235         22 KDVKATELGGIAIKEALERANVSAEDVEEVIMGTVLQGGQGQIPSRQAARAAGIPWEVQTETINKVCASGLRAVTLADQI  101 (393)
T ss_pred             CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHH
T ss_conf             89989999999999999873989899998999935733545519999999769998886078825440547999999999


Q ss_pred             HHCCCCCEEEEEECCCCCCC
Q ss_conf             97399976999503320145
Q gi|254781019|r  125 VAKSPERKVLIVASDVARYD  144 (396)
Q Consensus       125 i~sg~~~~aLVV~sD~~~~~  144 (396)
                      |++|....+|+++.|.++..
T Consensus       102 I~sG~~dv~lagGvEsmS~~  121 (393)
T PRK08235        102 IRAGDASVIVAGGMESMSNA  121 (393)
T ss_pred             HHCCCCCEEEEEEEEECCCC
T ss_conf             85898746688604654567


No 48 
>PRK08371 consensus
Probab=99.26  E-value=1.6e-09  Score=78.22  Aligned_cols=96  Identities=20%  Similarity=0.272  Sum_probs=80.9

Q ss_pred             CCCCHHHHHHHHHHHHHHHCCHHHCCEEEEECCCCCC--CCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHH
Q ss_conf             9859999999999999972795786899994578875--46005888863202687735898414203588899878999
Q gi|254781019|r   47 PDEDIVTMAAAAALPIMQNQDKNLIDTLFFATESSVD--QSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACAL  124 (396)
Q Consensus        47 ~~Ed~~tmA~~Aa~~~L~~~~~~~Id~li~~T~t~~~--~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~  124 (396)
                      ++.+..+|+++|++++|+++++++||-++++......  .....+..+...+|++ .+++.-++.+|.++..|+..|...
T Consensus        18 ~~~~~~~L~~ea~~~Al~dAgi~~iD~v~~g~~~~~~~~~~~~~~~~~a~~~Gl~-~vp~~~v~~~caSg~~Ai~~Aa~~   96 (388)
T PRK08371         18 WRTSLRDLAVEAILKAMDDAGIDKVDSLYVGNMASGSFIEQENLGALIADWAGLG-NIPAVKVEAACASGGAAVQEGAKA   96 (388)
T ss_pred             CCCCHHHHHHHHHHHHHHHCCCCHHHEEEEECCCCCCCCCHHHHHHHHHHHCCCC-CCCEEEECCCCHHHHHHHHHHHHH
T ss_conf             9989899999999999998099833348991356542221323999999975999-986246667357899999999999


Q ss_pred             HHCCCCCEEEEEECCCCCC
Q ss_conf             9739997699950332014
Q gi|254781019|r  125 VAKSPERKVLIVASDVARY  143 (396)
Q Consensus       125 i~sg~~~~aLVV~sD~~~~  143 (396)
                      |++|....+|+++.|..+.
T Consensus        97 I~sG~~d~vla~G~e~ms~  115 (388)
T PRK08371         97 VLSGLEDVVLVVGVEKMTD  115 (388)
T ss_pred             HHCCCCCEEEEEEEEECCC
T ss_conf             9828898899986753467


No 49 
>pfam02797 Chal_sti_synt_C Chalcone and stilbene synthases, C-terminal domain. This domain of chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in the N-terminal domain.
Probab=99.23  E-value=6.7e-11  Score=86.76  Aligned_cols=116  Identities=13%  Similarity=0.109  Sum_probs=88.1

Q ss_pred             CCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             54235660169899999999999999962988211012331145405788888641102454410013455543334445
Q gi|254781019|r  192 RTALVDGKYSTKIYLQSLEAVWHDYQKNKGHDFNDFQYFCYHQPFTRMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYN  271 (396)
Q Consensus       192 ~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~~did~~v~H~p~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~  271 (396)
                      .+..+-.+.+....-+.+...+..++++.|++..|+.+|++|+.++|+++.....+...          ++++..+....
T Consensus        25 Gf~~~Ls~~VP~~i~~~l~~~v~~~L~~~gl~~~d~~~wa~HPGG~~Ilda~~~~L~L~----------~~~l~~Sr~vL   94 (151)
T pfam02797        25 GLTFHLLKDVPQLISKNIEKCLVEAFDPLGISDWNSIFWIAHPGGPAILDQVEAKLGLK----------PEKLRASRHVL   94 (151)
T ss_pred             CEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHCCCC----------HHHHHHHHHHH
T ss_conf             88999882636999998999999999874998332452788799789999999981999----------89999999999


Q ss_pred             HHCCCCCCCHHHHHHHHHHHHC---CCCCCC---CEEEEEEECCCCCEEEEE
Q ss_conf             3238543233899999999715---743698---889998407983037787
Q gi|254781019|r  272 RLIGNSYTASLYIALISLLDHS---SENLAG---KRVGFFSYGSGCVAEFFS  317 (396)
Q Consensus       272 ~~~GN~~SASi~l~L~slLe~~---~~~~~G---~rIll~syGsG~~a~~f~  317 (396)
                      +++|||+|+|+++.|..++++.   +...+|   +..++++||.|+++|+.-
T Consensus        95 ~~~GNmSS~tVlfVLe~~~~~~~~~~~~~~g~~~e~gl~~AfGPG~t~E~~L  146 (151)
T pfam02797        95 SEYGNMSSACVLFILDEMRKKSLKKGKSTTGEGLEWGVLFGFGPGLTVETVV  146 (151)
T ss_pred             HHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCHHHHHHH
T ss_conf             9758618999999999999766444788888886568999968829999999


No 50 
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=99.21  E-value=7.2e-09  Score=74.13  Aligned_cols=266  Identities=18%  Similarity=0.143  Sum_probs=145.0

Q ss_pred             CCCEEEEEEEECCCEEECHHHHHHHC--CC---------CHHHHHHHCC-C-CE---EEECCCCC----C-HHHHHHHHH
Q ss_conf             96206688873489045599999870--99---------9879763038-3-24---66559985----9-999999999
Q gi|254781019|r    1 MAIGIEDISFYTTNQYLDLSVIAEKY--RL---------DVAKFYVGIG-Q-ER---MSVLNPDE----D-IVTMAAAAA   59 (396)
Q Consensus         1 M~vGI~~i~~y~P~~~v~~~~l~~~~--g~---------~~~k~~~~lG-i-~~---r~v~~~~E----d-~~tmA~~Aa   59 (396)
                      ++|-|.+++..+|.- -+.+++-+..  |.         +.+++...++ . ..   .....+.|    | ..-|+++++
T Consensus         1 ~rIaItG~g~~~P~g-~~~~~fw~~L~~g~s~i~~~~~~~~~~~~~~~~g~i~~~~~~~~i~~~~~~~~dp~~rl~l~aa   79 (406)
T cd00834           1 RRVVITGLGAVTPLG-NGVEEFWEALLAGRSGIRPITRFDASGFPSRIAGEVPDFDPEDYLDRKELRRMDRFAQFALAAA   79 (406)
T ss_pred             CEEEEEECEEECCCC-CCHHHHHHHHHCCCCEEECCCCCCCCCCCCCEEEECCCCCHHHCCCHHHHHHCCHHHHHHHHHH
T ss_conf             909999577889797-9999999999749987744883334258885536658888011589999985599999999999


Q ss_pred             HHHHHHCC--HHHCC----EEEEECCCCC---------------------C-----CCHHHHHHHHHHHCCCCCCEEEEE
Q ss_conf             99997279--57868----9999457887---------------------5-----460058888632026877358984
Q gi|254781019|r   60 LPIMQNQD--KNLID----TLFFATESSV---------------------D-----QSKSAAIWLHKLLGLNSSCRVVEL  107 (396)
Q Consensus        60 ~~~L~~~~--~~~Id----~li~~T~t~~---------------------~-----~~~~~a~~v~~~Lgl~~~~~~~Di  107 (396)
                      .++|++++  +++++    .|+++|..+.                     +     .....+..|...|++...  ++-+
T Consensus        80 ~~Al~dAgl~~~~~~~~~~gV~vGs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~Gp--~~tv  157 (406)
T cd00834          80 EEALADAGLDPEELDPERIGVVIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNMAAGQVAIRLGLRGP--NYTV  157 (406)
T ss_pred             HHHHHHCCCCHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCHHHHHHHHHHCCCCC--CEEE
T ss_conf             99999759982344866447999437773777999999998558665681121011312899999998499997--4203


Q ss_pred             CCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC-----------C----CCC---CC--------CCCCCCEEEEE
Q ss_conf             1420358889987899997399976999503320145-----------8----887---53--------34783024688
Q gi|254781019|r  108 KQACYSATCALHMACALVAKSPERKVLIVASDVARYD-----------L----GSS---GE--------PTQGCGAVAIL  161 (396)
Q Consensus       108 ~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~-----------~----~~~---~~--------~t~GaGA~All  161 (396)
                      ..+|++++.||..|..+|++|....+||.++|.....           +    ..+   .+        +..|.|+++++
T Consensus       158 ~taCsSsl~Al~~A~~~L~~G~~d~aivgg~~~~~~~~~~~~f~~~~~Ls~~~~~p~~~~rpFD~~adG~v~gEGa~~~v  237 (406)
T cd00834         158 STACASGAHAIGDAARLIRLGRADVVIAGGAEALITPLTLAGFAALRALSTRNDDPEKASRPFDKDRDGFVLGEGAGVLV  237 (406)
T ss_pred             CCHHHHHHHHHHHHHHHHHCCCCCHHHHEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCEEEEE
T ss_conf             34416767889999999977954202110024127868999999888873389987666565556788400128655885


Q ss_pred             ECCCC-------CCCEEEECCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECC
Q ss_conf             42687-------63035310001567865112758875423566016989999999999999996298821101233114
Q gi|254781019|r  162 ISSQT-------SILEIEDITGIYTNDCMDFWRPNYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHDFNDFQYFCYHQ  234 (396)
Q Consensus       162 v~~~~-------~~~~~~~~~~~~~~~~~df~rp~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~~did~~v~H~  234 (396)
                      +.+..       .+.......+.. .   |-++.. .  +.-++        .....++++.+++.|++++||+|+..|-
T Consensus       238 L~~~~~A~~~g~~i~a~I~g~~~~-~---dg~~~~-~--~~p~~--------~~~~~~i~~al~~agi~~~~I~yIe~Hg  302 (406)
T cd00834         238 LESLEHAKARGAKIYAEILGYGAS-S---DAYHIT-A--PDPDG--------EGAARAMRAALADAGLSPEDIDYINAHG  302 (406)
T ss_pred             CCCHHHHHHCCCCEEEEEEEEEEE-C---CCCCCC-C--CCCCH--------HHHHHHHHHHHHHHCCCCCCCCEEEEEC
T ss_conf             145999986799168999889993-7---998888-8--89898--------9999999999998589974452899704


Q ss_pred             CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
Q ss_conf             54057888886411024544100134555433344453238543233899999999
Q gi|254781019|r  235 PFTRMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALISLL  290 (396)
Q Consensus       235 p~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~slL  290 (396)
                      .+.++.+.....-......+.     ...+ +....-..+||+-.||=.+.|...+
T Consensus       303 tGt~~gD~~E~~ai~~~f~~~-----~~~~-~i~s~K~~iGH~~~asG~~~li~~~  352 (406)
T cd00834         303 TSTPLNDAAESKAIKRVFGEH-----AKKV-PVSSTKSMTGHLLGAAGAVEAIATL  352 (406)
T ss_pred             CCCCCCCHHHHHHHHHHHCCC-----CCCC-EEECCHHHHCCCHHHHHHHHHHHHH
T ss_conf             878677999999999985567-----8986-6888211001188999999999999


No 51 
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=99.17  E-value=6.9e-09  Score=74.24  Aligned_cols=100  Identities=17%  Similarity=0.108  Sum_probs=84.6

Q ss_pred             CCCCCHHHHHHHHHHHHHHHC--CHHHCCEEEEECCCCCC-CCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHH
Q ss_conf             998599999999999999727--95786899994578875-460058888632026877358984142035888998789
Q gi|254781019|r   46 NPDEDIVTMAAAAALPIMQNQ--DKNLIDTLFFATESSVD-QSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMAC  122 (396)
Q Consensus        46 ~~~Ed~~tmA~~Aa~~~L~~~--~~~~Id~li~~T~t~~~-~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~  122 (396)
                      -.+..+.+|+..|++.+|++.  +|++||.+|++..+... ...-.+-.+.-..|++..++++.++.+|.+++.|+..|.
T Consensus        21 l~~~~~~~L~~~a~~~~l~r~~v~~~~Id~vi~G~v~~~g~~~~n~aR~~~l~aglp~~vpa~tvn~~C~SGl~Ai~~A~  100 (390)
T PRK06504         21 LAGWHPADLAAQVLDALVDRSGADPAQIEDVIMGCVSQAGEQAMNVARNAVLASKLPESVPGTSIDRQCGSSQQALHFAA  100 (390)
T ss_pred             CCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHH
T ss_conf             89998999999999999988098989989899991787453324099999997799976754777346785899999999


Q ss_pred             HHHHCCCCCEEEEEECCCCCCCC
Q ss_conf             99973999769995033201458
Q gi|254781019|r  123 ALVAKSPERKVLIVASDVARYDL  145 (396)
Q Consensus       123 ~~i~sg~~~~aLVV~sD~~~~~~  145 (396)
                      ..|++|....+|+.+.|.++..+
T Consensus       101 ~~I~sG~~dv~lagGvEsmS~~P  123 (390)
T PRK06504        101 QAVMSGTMDVVIAAGVESMTRVP  123 (390)
T ss_pred             HHHHCCCCCEEEECCEEECCCCC
T ss_conf             99847996777315621036898


No 52 
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=99.15  E-value=4.5e-09  Score=75.40  Aligned_cols=99  Identities=13%  Similarity=0.136  Sum_probs=83.4

Q ss_pred             CCCCHHHHHHHHHHHHHHHC--CHHHCCEEEEECCCCC-CCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHH
Q ss_conf             98599999999999999727--9578689999457887-54600588886320268773589841420358889987899
Q gi|254781019|r   47 PDEDIVTMAAAAALPIMQNQ--DKNLIDTLFFATESSV-DQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACA  123 (396)
Q Consensus        47 ~~Ed~~tmA~~Aa~~~L~~~--~~~~Id~li~~T~t~~-~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~  123 (396)
                      .+..+.+|++.|.+.+|++.  +|++||.++++..... ......+-.+.-..|++..++++.++.+|.+++.|+..|..
T Consensus        22 ~~~~~~~L~a~ai~~~l~r~~i~p~~Id~vi~G~v~~~g~~~~n~aR~~~L~aGlp~~vpa~tVn~~CaSGl~Av~~A~~  101 (382)
T PRK07801         22 AGVHPADLGAHVLRGLVDRNDIDPAAVDDVIFGCVDAIGPQAGNIARTSWLAAGYPEEVPGVTVDRQCGSSQQAIHFAAQ  101 (382)
T ss_pred             CCCCHHHHHHHHHHHHHHHHCCCHHHCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHH
T ss_conf             99999999999999999980979899898999716665665567999999976999888648884121589999999998


Q ss_pred             HHHCCCCCEEEEEECCCCCCCC
Q ss_conf             9973999769995033201458
Q gi|254781019|r  124 LVAKSPERKVLIVASDVARYDL  145 (396)
Q Consensus       124 ~i~sg~~~~aLVV~sD~~~~~~  145 (396)
                      .|++|....+|+++.|.++..+
T Consensus       102 ~I~~G~~dv~lagGvEsMS~~P  123 (382)
T PRK07801        102 AIMSGTADVIVAGGVQNMSQIP  123 (382)
T ss_pred             HHCCCCCCEEEECCEEECCCCC
T ss_conf             8628996746651543225576


No 53 
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.15  E-value=2.6e-08  Score=70.67  Aligned_cols=261  Identities=14%  Similarity=0.085  Sum_probs=143.8

Q ss_pred             CCEEEEEEEECCCEEECHHHHHHHC--CC---------CHHHHHHHCCCCEEEECCCC--C----------CH-HHHHHH
Q ss_conf             6206688873489045599999870--99---------98797630383246655998--5----------99-999999
Q gi|254781019|r    2 AIGIEDISFYTTNQYLDLSVIAEKY--RL---------DVAKFYVGIGQERMSVLNPD--E----------DI-VTMAAA   57 (396)
Q Consensus         2 ~vGI~~i~~y~P~~~v~~~~l~~~~--g~---------~~~k~~~~lGi~~r~v~~~~--E----------d~-~tmA~~   57 (396)
                      .|-|.++|.-+|.-. +.+++-+..  |.         +...+....+   -.+.+.+  +          |. .-|++.
T Consensus         3 RVvItG~g~v~P~g~-~~e~fw~~L~~G~s~i~~~~~~d~~~~~~~~~---g~i~~f~~~~~i~~~~~r~~d~~~~~~l~   78 (411)
T PRK07314          3 RVVVTGLGAVSPLGN-DVESTWKNLLAGKSGIGPITKFDTSDLAVKIA---GEVKDFNPDDYMSRKEARRMDRFIQYGIA   78 (411)
T ss_pred             CEEEECCEEECCCCC-CHHHHHHHHHCCCCEEEECCCCCCCCCCCCEE---EECCCCCHHHCCCHHHHHHCCHHHHHHHH
T ss_conf             699981678898989-99999999980998365478666546876366---78189895775899999855999999999


Q ss_pred             HHHHHHHHCC--HHHCC----EEEEECCCCC---------------------CCC-----HHHHHHHHHHHCCCCCCEEE
Q ss_conf             9999997279--57868----9999457887---------------------546-----00588886320268773589
Q gi|254781019|r   58 AALPIMQNQD--KNLID----TLFFATESSV---------------------DQS-----KSAAIWLHKLLGLNSSCRVV  105 (396)
Q Consensus        58 Aa~~~L~~~~--~~~Id----~li~~T~t~~---------------------~~~-----~~~a~~v~~~Lgl~~~~~~~  105 (396)
                      ++.+||++++  +++++    .|+++|..+.                     ...     -..+.+|...+++...  ++
T Consensus        79 aa~~Al~dAGl~~~~~~~~r~gv~vGt~~g~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~a~~is~~~~l~Gp--~~  156 (411)
T PRK07314         79 AAKQAVEDAGLEITEENADRIGVIIGSGIGGLETIEEQHITLHEKGPRRVSPFFVPMAIINMAAGHVSIRYGAKGP--NH  156 (411)
T ss_pred             HHHHHHHHCCCCHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC--CC
T ss_conf             9999999739994680865568998147762576999999998449554585202566502899999998399997--31


Q ss_pred             EECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC------------------CCCCCC--------CCCCCCEEE
Q ss_conf             841420358889987899997399976999503320145------------------888753--------347830246
Q gi|254781019|r  106 ELKQACYSATCALHMACALVAKSPERKVLIVASDVARYD------------------LGSSGE--------PTQGCGAVA  159 (396)
Q Consensus       106 Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~------------------~~~~~~--------~t~GaGA~A  159 (396)
                      -+..+|++++.||..|..+|++|....+||.++|.....                  +....+        +..|.||++
T Consensus       157 tv~~aCsSsl~Al~~A~~~i~~G~~d~aivgg~~~~~~~~~~~~f~~~~~ls~~~~~p~~~~rPFD~~adG~v~gEGa~~  236 (411)
T PRK07314        157 SIVTACATGAHAIGDAARLIQYGDADVMVAGGAEAAITPLGIAGFAAARALSTRNDDPERASRPFDKDRDGFVMGEGAGI  236 (411)
T ss_pred             CCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEE
T ss_conf             11140137999999999999859977654145245678899999999888740789987777732137997322561478


Q ss_pred             EEECCC-------CCCCEEEECCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEE
Q ss_conf             884268-------7630353100015678651127588754235660169899999999999999962988211012331
Q gi|254781019|r  160 ILISSQ-------TSILEIEDITGIYTNDCMDFWRPNYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHDFNDFQYFCY  232 (396)
Q Consensus       160 llv~~~-------~~~~~~~~~~~~~~~~~~df~rp~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~~did~~v~  232 (396)
                      +++.+.       .++......++..    .|-++.. .+.+...          ....++++.+++.|++++||+|+..
T Consensus       237 vvLe~~~~A~~~g~~i~a~i~G~~~~----~d~~~~~-~p~~~~~----------g~~~a~~~al~~agi~~~~i~yIe~  301 (411)
T PRK07314        237 LVLEELEHAKARGAKIYAEVVGYGMT----GDAYHMT-APAPDGE----------GAARAMVAALKDAGINPEDIDYINA  301 (411)
T ss_pred             EEECCHHHHHHCCCCEEEEEEEEEEC----CCCCCCC-CCCCCCH----------HHHHHHHHHHHHHCCCCCCEEEEEE
T ss_conf             85265999987799468998313764----7998887-8898605----------6788999999985899633217997


Q ss_pred             CCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
Q ss_conf             145405788888641102454410013455543334445323854323389999999
Q gi|254781019|r  233 HQPFTRMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALISL  289 (396)
Q Consensus       233 H~p~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~sl  289 (396)
                      |-.+.++.+....+.....-.+..     ..+ +....=..+|++.+||=.+.|...
T Consensus       302 hgtgt~~~D~~E~~al~~~f~~~~-----~~~-~i~S~K~~~GH~~~AsG~~~li~~  352 (411)
T PRK07314        302 HGTSTPAGDKAETQAIKRVFGEHA-----YKV-AVSSTKSMTGHLLGAAGAVEAIFT  352 (411)
T ss_pred             ECCCCCCCCHHHHHHHHHHHCCCC-----CCC-CCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf             368787779889999999865558-----898-764803310336888999999999


No 54 
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=99.13  E-value=3.3e-08  Score=69.99  Aligned_cols=99  Identities=18%  Similarity=0.153  Sum_probs=83.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHC--CHHHCCEEEEECCCCCC-CCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHH
Q ss_conf             98599999999999999727--95786899994578875-4600588886320268773589841420358889987899
Q gi|254781019|r   47 PDEDIVTMAAAAALPIMQNQ--DKNLIDTLFFATESSVD-QSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACA  123 (396)
Q Consensus        47 ~~Ed~~tmA~~Aa~~~L~~~--~~~~Id~li~~T~t~~~-~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~  123 (396)
                      .+-.+.+|++.+.+.+|++.  +|++||-||++...+.. ...-.+-++.-.-|++..++++-++..|.+++.|+..|..
T Consensus        24 ~~~~~~~L~a~~i~~~l~r~~i~~~~Id~vi~G~v~~~g~~g~n~aR~~al~aGlp~~vpa~TVnr~C~SGl~Ai~~Aa~  103 (402)
T PRK08242         24 HEVKPVRLAAGLLNALRDRNGLDTAAVDDVVLGCVTPVGDQGADIARTAVLAAGLPETVPGVQINRFCASGLEAVNLAAA  103 (402)
T ss_pred             CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHH
T ss_conf             98989999999999999870989899997999807765544577999999976999888647884505578999999999


Q ss_pred             HHHCCCCCEEEEEECCCCCCCC
Q ss_conf             9973999769995033201458
Q gi|254781019|r  124 LVAKSPERKVLIVASDVARYDL  145 (396)
Q Consensus       124 ~i~sg~~~~aLVV~sD~~~~~~  145 (396)
                      .|++|....+|+.+.|.++..+
T Consensus       104 ~I~~G~~dv~iAGGvEsmS~~P  125 (402)
T PRK08242        104 KVRSGWDDLVIAGGVESMSRVP  125 (402)
T ss_pred             HHHCCCCCEEEECCCCCCCCCC
T ss_conf             9966998889976613456575


No 55 
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.13  E-value=1.8e-07  Score=65.45  Aligned_cols=255  Identities=15%  Similarity=0.162  Sum_probs=146.5

Q ss_pred             CCCEEEEEEEECCCEEECHHHHHHHCCCCHHHHHHHCCCCEEE-E-----------CCCCCCHHHHHHHHHHHHHHHCCH
Q ss_conf             9620668887348904559999987099987976303832466-5-----------599859999999999999972795
Q gi|254781019|r    1 MAIGIEDISFYTTNQYLDLSVIAEKYRLDVAKFYVGIGQERMS-V-----------LNPDEDIVTMAAAAALPIMQNQDK   68 (396)
Q Consensus         1 M~vGI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~~lGi~~r~-v-----------~~~~Ed~~tmA~~Aa~~~L~~~~~   68 (396)
                      |.|-|++||.--|-=  +.++.-+.  +-.+    ..||.... +           .......-.+...|+..+|++++.
T Consensus         2 ~RVVITGiG~vSplG--~~~e~w~~--L~~G----~sgI~~~~~f~~~~~~~~~~~~~~~~~~~~l~~~a~~~Al~dAgl   73 (379)
T PRK05952          2 MKVVVTGIGLVSALG--SLEQSWQR--LLQG----KSGIKLHQPFPELPPLPLGLIGSQPISLEDLTQTTVTAALKDAGL   73 (379)
T ss_pred             CEEEEECCEEECCCC--CHHHHHHH--HHCC----CCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
T ss_conf             879994511068888--85999999--9768----988256777777776142002778568999999999999997799


Q ss_pred             ----HHCCEEEEECCCCCCC--------------------------CH-HHHHHHHHHHCCCCCCEEEEECCCHHHHHHH
Q ss_conf             ----7868999945788754--------------------------60-0588886320268773589841420358889
Q gi|254781019|r   69 ----NLIDTLFFATESSVDQ--------------------------SK-SAAIWLHKLLGLNSSCRVVELKQACYSATCA  117 (396)
Q Consensus        69 ----~~Id~li~~T~t~~~~--------------------------~~-~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~A  117 (396)
                          .++ .++++|..+...                          .| ..+..+...+|+..  +++-+..+|++++.|
T Consensus        74 ~~~~~~~-gv~~Gt~~g~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~ia~~~g~~G--~~~~~~~aCaS~~~A  150 (379)
T PRK05952         74 TPPLTDC-GVVIGSSRGFQGQWEKLARQIYVGDQSGDEAEENWLDTLPHQAAIATARQIGAQG--PVLAPMAACATGIWA  150 (379)
T ss_pred             CCCCCCE-EEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC--CEECCCCHHHHHHHH
T ss_conf             9975465-8999967526768999998752047888667216999853399999999839999--620401274789999


Q ss_pred             HHHHHHHHHCCCCCEEEEEECCCCCCCC------------CCC--------CCCCCCCCEEEEEECCC-------CCCCE
Q ss_conf             9878999973999769995033201458------------887--------53347830246884268-------76303
Q gi|254781019|r  118 LHMACALVAKSPERKVLIVASDVARYDL------------GSS--------GEPTQGCGAVAILISSQ-------TSILE  170 (396)
Q Consensus       118 L~~A~~~i~sg~~~~aLVV~sD~~~~~~------------~~~--------~~~t~GaGA~Allv~~~-------~~~~~  170 (396)
                      |..|..+|++|....++|.++|......            .+.        +=+..|-||+++++++.       .++..
T Consensus       151 i~~A~~~I~~G~~d~~i~gg~~~~~~~~~~~~f~~~~~ls~~~~rPFd~~r~G~v~gEGa~~lvLE~~~~A~~rga~iya  230 (379)
T PRK05952        151 IAQGAELIQTGQCQRVIAGAVESPITPLTLAGFQKMGALAKTGAYPFDRQREGLVLGEGGAILVLESEELAQKRGAKIYG  230 (379)
T ss_pred             HHHHHHHHHCCCCCEEEEEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCEEEEECCHHHHHHCCCCEEE
T ss_conf             99999999839988798678765248276899986578344676745468996025875046764559999878995689


Q ss_pred             EEECCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCCHHHHHHHHHHCCH
Q ss_conf             53100015678651127588754235660169899999999999999962988211012331145405788888641102
Q gi|254781019|r  171 IEDITGIYTNDCMDFWRPNYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHDFNDFQYFCYHQPFTRMAEKAHIRLSKI  250 (396)
Q Consensus       171 ~~~~~~~~~~~~~df~rp~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~~did~~v~H~p~~k~~~~~~~~l~~~  250 (396)
                      .....+. +.|.+....|..      +|        .....+++..+++.+++++||||+..|-+..+..+....+..+.
T Consensus       231 ~i~g~~~-~~d~~~~~~~~~------~g--------~~~~~am~~al~~agi~~~~Idyi~aHgtgT~~~D~~E~~ai~~  295 (379)
T PRK05952        231 QILGFGL-TCDAYHMSAPEP------SG--------KSAILAIQQCLARSGLTPEDIDYIHAHGTATRLNDQREANLIQT  295 (379)
T ss_pred             EEECCEE-CCCCCCCCCCCC------CH--------HHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHHH
T ss_conf             9935255-368988878898------98--------99999999999984998333528994678787769999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
Q ss_conf             4544100134555433344453238543233899999999
Q gi|254781019|r  251 VHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALISLL  290 (396)
Q Consensus       251 ~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~slL  290 (396)
                      ..        ..++ +....-..+|++..||=.+.+...+
T Consensus       296 vf--------g~~~-~v~s~Ks~~GH~~~aaG~~e~~~~~  326 (379)
T PRK05952        296 LF--------PHRV-AVSSTKGATGHTLGASGALGVAFSL  326 (379)
T ss_pred             HH--------CCCC-CCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf             71--------8778-8778743324532777999999999


No 56 
>PRK08041 consensus
Probab=99.10  E-value=1.9e-08  Score=71.55  Aligned_cols=99  Identities=13%  Similarity=0.156  Sum_probs=83.5

Q ss_pred             CCCCHHHHHHHHHHHHHHHC--CHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHH
Q ss_conf             98599999999999999727--9578689999457887546005888863202687735898414203588899878999
Q gi|254781019|r   47 PDEDIVTMAAAAALPIMQNQ--DKNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACAL  124 (396)
Q Consensus        47 ~~Ed~~tmA~~Aa~~~L~~~--~~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~  124 (396)
                      .+..+.+|+..+.+.+|++.  +|++||-++++.........-.+-.+.-..|++..++++-++..|.++..|+.+|...
T Consensus        22 ~~~~~~~L~a~~ik~~l~r~gi~~~~ID~vi~G~v~~~g~g~n~aR~~al~aGlp~~vpa~tVnr~C~SGl~Ai~~Aa~~  101 (391)
T PRK08041         22 ARHSAVELGSLVVKALIERTGVPAYAVDEVILGQVLTAGAGQNPARQSAIKGGLPNSVSAITINDVCGSGLKALHLATQA  101 (391)
T ss_pred             CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHH
T ss_conf             89999999999999999981989899898999805765656659999999769998887178751656878999999999


Q ss_pred             HHCCCCCEEEEEECCCCCCCC
Q ss_conf             973999769995033201458
Q gi|254781019|r  125 VAKSPERKVLIVASDVARYDL  145 (396)
Q Consensus       125 i~sg~~~~aLVV~sD~~~~~~  145 (396)
                      |++|....+|+.+.|.++..+
T Consensus       102 I~~G~~dvvlagGvEsmS~~P  122 (391)
T PRK08041        102 IQCGEADIVIAGGQENMSRAP  122 (391)
T ss_pred             HHCCCCCEEEEEEEECCCCCC
T ss_conf             867997667774122146584


No 57 
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=99.10  E-value=1.3e-08  Score=72.49  Aligned_cols=98  Identities=17%  Similarity=0.159  Sum_probs=75.3

Q ss_pred             HCCCCEEEECCCCCCHHHHHHHHHHHHHHHCC--HHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHH
Q ss_conf             03832466559985999999999999997279--5786899994578875460058888632026877358984142035
Q gi|254781019|r   36 GIGQERMSVLNPDEDIVTMAAAAALPIMQNQD--KNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYS  113 (396)
Q Consensus        36 ~lGi~~r~v~~~~Ed~~tmA~~Aa~~~L~~~~--~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g  113 (396)
                      |+|+.... -.++.+...|+++|+++||++++  ++|||.+++++..+. .   ....+.+.||+.. .....+..+|.+
T Consensus        11 G~G~tp~~-r~~~~t~~~La~eA~~~AL~DAGl~~~DIDg~~~~~~~~~-~---~~~~~~~~lGi~~-~~~~~~~~gGas   84 (388)
T PRK08142         11 GAYEHPTR-KAPDKSVAQLHAEVAKGALADAGLTLADVDGYFCAGDAPG-L---GPASMVDYLGLKV-RHVDSTETGGSS   84 (388)
T ss_pred             EEEECCCC-CCCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCCC-C---CHHHHHHHCCCCC-EEECCCCCCCHH
T ss_conf             54345662-3899899999999999999975999899999987678887-4---1899999709985-764475463579


Q ss_pred             HHHHHHHHHHHHHCCCCCEEEEEECC
Q ss_conf             88899878999973999769995033
Q gi|254781019|r  114 ATCALHMACALVAKSPERKVLIVASD  139 (396)
Q Consensus       114 ~~~AL~~A~~~i~sg~~~~aLVV~sD  139 (396)
                      +..++..|...|++|....+||+.++
T Consensus        85 ~~~~~~~A~~aIasG~~d~vlv~~a~  110 (388)
T PRK08142         85 YLAHVGHAAQAIAAGKCSVALITLAG  110 (388)
T ss_pred             HHHHHHHHHHHHHHCCCCEEEEEEEC
T ss_conf             99999999999984887789999812


No 58 
>pfam08545 ACP_syn_III 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III. This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EC:2.3.1.41, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria.
Probab=99.09  E-value=2.1e-10  Score=83.64  Aligned_cols=63  Identities=24%  Similarity=0.346  Sum_probs=54.9

Q ss_pred             EEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCC---CCCCCCEEEEEECCCCC
Q ss_conf             9841420358889987899997399976999503320145888753---34783024688426876
Q gi|254781019|r  105 VELKQACYSATCALHMACALVAKSPERKVLIVASDVARYDLGSSGE---PTQGCGAVAILISSQTS  167 (396)
Q Consensus       105 ~Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~~~~~~~---~t~GaGA~Allv~~~~~  167 (396)
                      ||++++|+|+++||++|.++|++++.+++|||++|+.+...+..++   +.+||||+|+++++.+.
T Consensus         1 fDi~~~Csg~~~aL~~A~~~i~sg~~~~vLvv~~e~~s~~~~~~d~~~~~lfGDga~A~il~~~~~   66 (80)
T pfam08545         1 FDINAACSGFVYALSTAAALIRSGRAKNVLVVGAETLSRILDWTDRSTAVLFGDGAGAVVLEATEE   66 (80)
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCEEEEEEEEECCC
T ss_conf             960641488999999999999879988589985112455368667724699864026999997178


No 59 
>PRK07855 lipid-transfer protein; Provisional
Probab=99.07  E-value=2.9e-07  Score=64.20  Aligned_cols=97  Identities=19%  Similarity=0.228  Sum_probs=71.9

Q ss_pred             HCCCCEEEECCCCCCHHHHHHHHHHHHHHHCC--HHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEE-EECCCHH
Q ss_conf             03832466559985999999999999997279--57868999945788754600588886320268773589-8414203
Q gi|254781019|r   36 GIGQERMSVLNPDEDIVTMAAAAALPIMQNQD--KNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVV-ELKQACY  112 (396)
Q Consensus        36 ~lGi~~r~v~~~~Ed~~tmA~~Aa~~~L~~~~--~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~-Di~~aC~  112 (396)
                      |.|+.... -.++.+...|+++|++++|++++  ++|||.+++.+..   ..+.  ..+.+.+|+.. ...+ .+.++|.
T Consensus        10 GvG~t~f~-r~~~~s~~~L~~eA~~~AL~DAGl~~~dIDg~~~~~~~---~~~~--~~ia~~lG~~~-~~~~~~v~~~g~   82 (386)
T PRK07855         10 GIGATEFS-KNSGRSELRLACEAVLAALDDAGLAPSDVDGLVTFTMD---TNPE--IAVARAVGIGE-LKFFSQIGYGGG   82 (386)
T ss_pred             EEEEECCE-ECCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECC---CCCH--HHHHHHCCCCC-CCCCCCCCCCCH
T ss_conf             75530224-68998999999999999999759999996999896078---8828--99999719988-753221478855


Q ss_pred             HHHHHHHHHHHHHHCCCCCEEEEEECC
Q ss_conf             588899878999973999769995033
Q gi|254781019|r  113 SATCALHMACALVAKSPERKVLIVASD  139 (396)
Q Consensus       113 g~~~AL~~A~~~i~sg~~~~aLVV~sD  139 (396)
                      ++..++..|...|++|....+|++.++
T Consensus        83 s~~~~~~~A~~aIasG~~d~vl~~~~~  109 (386)
T PRK07855         83 AACATVQQAAMAVATGVADVVVAYRAF  109 (386)
T ss_pred             HHHHHHHHHHHHHHCCCCCEEEEEEEE
T ss_conf             799999999999973877789999741


No 60 
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=99.07  E-value=3.7e-08  Score=69.72  Aligned_cols=99  Identities=14%  Similarity=0.097  Sum_probs=83.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHC--CHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHH
Q ss_conf             98599999999999999727--9578689999457887546005888863202687735898414203588899878999
Q gi|254781019|r   47 PDEDIVTMAAAAALPIMQNQ--DKNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACAL  124 (396)
Q Consensus        47 ~~Ed~~tmA~~Aa~~~L~~~--~~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~  124 (396)
                      .+..+.+|++.+.+.+|++.  +|++||.||++...+.......+-.+.=..|++..++++.++..|.+++.|+.+|...
T Consensus        27 ~~~~~~~L~a~~i~~~l~r~~~~~~~Id~vi~G~~~~~g~g~n~aR~~~L~aGlp~~vpa~tVnr~C~SGl~Ai~~a~~~  106 (397)
T PRK06954         27 ASLTAPQLGAAAIAAAVERAGLKPEQIDEVVMGCVLPAGQGQAPARQAALGAGLPLSVGCTTVNKMCGSGMRAAMFAHDM  106 (397)
T ss_pred             CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHHHHHHHH
T ss_conf             89999999999999999873989899798999823655656649999999769998887788726658999999999999


Q ss_pred             HHCCCCCEEEEEECCCCCCCC
Q ss_conf             973999769995033201458
Q gi|254781019|r  125 VAKSPERKVLIVASDVARYDL  145 (396)
Q Consensus       125 i~sg~~~~aLVV~sD~~~~~~  145 (396)
                      |++|....+|+.+.|.++..+
T Consensus       107 I~sG~~dvvlagGvEsmS~~P  127 (397)
T PRK06954        107 LVAGSVDVIVAGGMESMTNAP  127 (397)
T ss_pred             HHCCCCCEEEEECCCCCCCCC
T ss_conf             967997456763344567675


No 61 
>TIGR03150 fabF 3-oxoacyl-[acyl-carrier-protein] synthase 2. FabB sequences should fall well below the noise cutoff of this model.
Probab=99.07  E-value=7.6e-08  Score=67.77  Aligned_cols=265  Identities=16%  Similarity=0.119  Sum_probs=142.3

Q ss_pred             CCEEEEEEEECCCEEECHHHHHHHC--CCC-HHHHHH--HCCCCEEE---ECCCC--------C----CHH-HHHHHHHH
Q ss_conf             6206688873489045599999870--999-879763--03832466---55998--------5----999-99999999
Q gi|254781019|r    2 AIGIEDISFYTTNQYLDLSVIAEKY--RLD-VAKFYV--GIGQERMS---VLNPD--------E----DIV-TMAAAAAL   60 (396)
Q Consensus         2 ~vGI~~i~~y~P~~~v~~~~l~~~~--g~~-~~k~~~--~lGi~~r~---v~~~~--------E----d~~-tmA~~Aa~   60 (396)
                      .|-|.+|+.-+|.-. +.+++-+..  |.+ ..++.+  .-+...+.   +.+.|        |    |.. -+++.|+.
T Consensus         2 rVaItG~g~~~P~g~-~~~~~w~~L~~g~s~i~~~~~~d~~~~~~~~~g~v~~fd~~~~i~~~~a~~~dp~~~l~l~aa~   80 (407)
T TIGR03150         2 RVVVTGLGAVTPLGN-GVEEFWENLLAGKSGIGPITRFDASDLPVKIAGEVKDFDPEDYIDKKEARRMDRFIQYALAAAK   80 (407)
T ss_pred             EEEEEECEEECCCCC-CHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEEECCCCHHHCCCHHHHHHCCHHHHHHHHHHH
T ss_conf             399984677897979-9999999997399744436877864687756777278894665899999751999999999999


Q ss_pred             HHHHHCC--HHHCC----EEEEECCCCC----------------CC----------CHHHHHHHHHHHCCCCCCEEEEEC
Q ss_conf             9997279--57868----9999457887----------------54----------600588886320268773589841
Q gi|254781019|r   61 PIMQNQD--KNLID----TLFFATESSV----------------DQ----------SKSAAIWLHKLLGLNSSCRVVELK  108 (396)
Q Consensus        61 ~~L~~~~--~~~Id----~li~~T~t~~----------------~~----------~~~~a~~v~~~Lgl~~~~~~~Di~  108 (396)
                      ++|++++  +++++    .|+++|..+.                +.          ....+..|...+++...  ++-+.
T Consensus        81 ~Al~dAG~~~~~~~~~~~gv~~gs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~is~~~~l~Gp--~~tv~  158 (407)
T TIGR03150        81 EAVEDSGLDIEEEDAERVGVIVGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQISIRYGAKGP--NHAVV  158 (407)
T ss_pred             HHHHHCCCCHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC--CCCCC
T ss_conf             9998639984452866459999257674577999999998538444585401576625899999998599996--44644


Q ss_pred             CCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC------------------CCCCCC--------CCCCCCEEEEEE
Q ss_conf             420358889987899997399976999503320145------------------888753--------347830246884
Q gi|254781019|r  109 QACYSATCALHMACALVAKSPERKVLIVASDVARYD------------------LGSSGE--------PTQGCGAVAILI  162 (396)
Q Consensus       109 ~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~------------------~~~~~~--------~t~GaGA~Allv  162 (396)
                      .+|++++.||..|..+|++|....+||.++|.....                  +....+        +..|.||+++++
T Consensus       159 taCsSsl~Al~~A~~~i~~G~~d~aivGG~~~~l~~~~~~~f~~~~~ls~~~~~p~~~~rPFD~~a~G~v~gEGa~~vvL  238 (407)
T TIGR03150       159 TACATGTHAIGDAFRLIQYGDADVMIAGGAEAAITPLGIAGFAAMKALSTRNDDPEKASRPFDKDRDGFVMGEGAGVLVL  238 (407)
T ss_pred             CHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE
T ss_conf             44389999999999998739854655037443579899999998877730678987776542247997445484578740


Q ss_pred             CCC-------CCCCEEEECCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCC
Q ss_conf             268-------7630353100015678651127588754235660169899999999999999962988211012331145
Q gi|254781019|r  163 SSQ-------TSILEIEDITGIYTNDCMDFWRPNYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHDFNDFQYFCYHQP  235 (396)
Q Consensus       163 ~~~-------~~~~~~~~~~~~~~~~~~df~rp~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~~did~~v~H~p  235 (396)
                      .+.       .++......++.. .|....-.|    .+  ++        .....++++.+++.+++++||+|+..|-.
T Consensus       239 e~~~~A~~~g~~I~a~i~g~g~~-~d~~~~t~~----~p--~~--------~~~~~~i~~al~~agi~~~~I~yIe~Hgt  303 (407)
T TIGR03150       239 EELEHAKARGAKIYAEIVGYGMS-GDAYHITAP----AP--EG--------EGAARAMRAALKDAGINPEDVDYINAHGT  303 (407)
T ss_pred             CCHHHHHHCCCEEEEEEEEEEEE-CCCCCCCCC----CC--CC--------HHHHHHHHHHHHHHCCCCCCEEEEEEECC
T ss_conf             66999987799689998210550-158876465----99--81--------67888999999986899863349997368


Q ss_pred             CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
Q ss_conf             4057888886411024544100134555433344453238543233899999999
Q gi|254781019|r  236 FTRMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALISLL  290 (396)
Q Consensus       236 ~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~slL  290 (396)
                      +....+..........-.+.     ...+ +....-..+|++-.||=.+.|...+
T Consensus       304 gt~~~D~~E~~al~~~fg~~-----~~~~-~i~S~K~~~GH~~~AaG~~~lik~~  352 (407)
T TIGR03150       304 STPLGDKAETKAIKRVFGDH-----AYKL-AVSSTKSMTGHLLGAAGAIEAIFTV  352 (407)
T ss_pred             CCCCCCHHHHHHHHHHHCCC-----CCCC-EEECHHHHHHHHHHHHHHHHHHHHH
T ss_conf             78776999999999986256-----8986-5788555543148999999999999


No 62 
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=99.06  E-value=3.7e-08  Score=69.70  Aligned_cols=98  Identities=11%  Similarity=0.091  Sum_probs=79.5

Q ss_pred             CCCCHHHHHHHHHHHHHHHC--CHHHCCEEEEECCCCCCCC-HHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHH
Q ss_conf             98599999999999999727--9578689999457887546-00588886320268773589841420358889987899
Q gi|254781019|r   47 PDEDIVTMAAAAALPIMQNQ--DKNLIDTLFFATESSVDQS-KSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACA  123 (396)
Q Consensus        47 ~~Ed~~tmA~~Aa~~~L~~~--~~~~Id~li~~T~t~~~~~-~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~  123 (396)
                      .+-.+.+|+..+.+.+|++.  +|++||.++++...+.... .-.+-...-.-|++..++++.++.+|.++..|+..|..
T Consensus        28 ~~~~~~~L~a~~~~~~l~r~gi~~~~Id~vi~G~~~~~g~~~~~~aR~~~l~aGlp~~vpa~tVn~~CaSG~~Ai~~A~~  107 (394)
T PRK06445         28 NDLRPEELAAVLINALIEKTGIKPEEIGDVITGCALQVGENWLYGGRHVVLLAKLPYTIPAMHVDRQCASSLTTVAIGAM  107 (394)
T ss_pred             CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHH
T ss_conf             78999999999999999874989899697999647555656674889999976999888748885541689999999999


Q ss_pred             HHHCCCCCEEEEEECCCCCCC
Q ss_conf             997399976999503320145
Q gi|254781019|r  124 LVAKSPERKVLIVASDVARYD  144 (396)
Q Consensus       124 ~i~sg~~~~aLVV~sD~~~~~  144 (396)
                      .|++|....+|+++.|.++..
T Consensus       108 ~I~sG~~dvvlAgGvEsmS~~  128 (394)
T PRK06445        108 EIATGMADIVIAGGVEHMTHT  128 (394)
T ss_pred             HHHCCCCCEEEEECEECCCCC
T ss_conf             997399999999474236678


No 63 
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=99.06  E-value=4.1e-08  Score=69.45  Aligned_cols=99  Identities=16%  Similarity=0.122  Sum_probs=82.3

Q ss_pred             CCCCHHHHHHHHHHHHHHH---CCHHHCCEEEEECCCCCC-CCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHH
Q ss_conf             9859999999999999972---795786899994578875-460058888632026877358984142035888998789
Q gi|254781019|r   47 PDEDIVTMAAAAALPIMQN---QDKNLIDTLFFATESSVD-QSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMAC  122 (396)
Q Consensus        47 ~~Ed~~tmA~~Aa~~~L~~---~~~~~Id~li~~T~t~~~-~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~  122 (396)
                      .+..+.+|++.+.+.+|++   .+|++||.++++...+.. ...-.+-++.-..|++.+++++-++..|.+++.|+.+|.
T Consensus        23 ~~~~~~~L~a~~i~~~l~r~~~l~~~~Id~vi~G~v~~~~~~g~n~aR~aaL~aGlp~~vpa~tVnr~C~SGl~Ai~~Aa  102 (387)
T PRK08947         23 RNVRAEDLSAHLMRALLARNPALDPAEIEDIIWGCVQQTLEQGFNIARNAALLAGIPHTVPAVTVNRLCGSSMQALHDAA  102 (387)
T ss_pred             CCCCHHHHHHHHHHHHHHHCCCCCHHHCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHH
T ss_conf             88999999999999999745896989989899970665544333599999997699988861664014237999999999


Q ss_pred             HHHHCCCCCEEEEEECCCCCCCC
Q ss_conf             99973999769995033201458
Q gi|254781019|r  123 ALVAKSPERKVLIVASDVARYDL  145 (396)
Q Consensus       123 ~~i~sg~~~~aLVV~sD~~~~~~  145 (396)
                      ..|++|....+|+.+.|.++..+
T Consensus       103 ~~I~~G~~dvvlaGGvEsMS~~P  125 (387)
T PRK08947        103 RAIMTGDGDVFLIGGVEHMGHVP  125 (387)
T ss_pred             HHHCCCCCCEEEEEEECCCCCCC
T ss_conf             86527997789984102257786


No 64 
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.05  E-value=1.9e-08  Score=71.56  Aligned_cols=264  Identities=15%  Similarity=0.101  Sum_probs=146.1

Q ss_pred             CCEEEEEEEECCCEEECHHHHHHHC--CCC-----HHHHHHHC-----CC-CEEEE-----CCCC----------CCH-H
Q ss_conf             6206688873489045599999870--999-----87976303-----83-24665-----5998----------599-9
Q gi|254781019|r    2 AIGIEDISFYTTNQYLDLSVIAEKY--RLD-----VAKFYVGI-----GQ-ERMSV-----LNPD----------EDI-V   52 (396)
Q Consensus         2 ~vGI~~i~~y~P~~~v~~~~l~~~~--g~~-----~~k~~~~l-----Gi-~~r~v-----~~~~----------Ed~-~   52 (396)
                      +|-|.+|+..+|-- .+.+++-+..  |.+     +++.....     |. .....     .+++          -|. .
T Consensus         5 rVaItGmg~~~P~g-~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~g~~~~~~~~~~~~fd~~~~i~~~~~~~~d~~~   83 (424)
T PRK06333          5 RIVVTGMGVVSPLG-NGVETFWQRLLAGQSGIRTLTDFPCGDLATKIGGWVPELAEDAEAGFDPDPYLDPKDQRKMDRFI   83 (424)
T ss_pred             CEEEECCEEECCCC-CCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCEECCCCCCCCCCCCCHHHCCCHHHHHHCCHHH
T ss_conf             89998768789898-99999999998199857548966454787742327367444543467956648999998629999


Q ss_pred             HHHHHHHHHHHHHCC--HHHC-----CEEEEECCCCCC-----------------CCH---------HHHHHHHHHHCCC
Q ss_conf             999999999997279--5786-----899994578875-----------------460---------0588886320268
Q gi|254781019|r   53 TMAAAAALPIMQNQD--KNLI-----DTLFFATESSVD-----------------QSK---------SAAIWLHKLLGLN   99 (396)
Q Consensus        53 tmA~~Aa~~~L~~~~--~~~I-----d~li~~T~t~~~-----------------~~~---------~~a~~v~~~Lgl~   99 (396)
                      -+++.|+.++|++++  ++++     -.++++|..+..                 ..|         ..+..+...+|+.
T Consensus        84 ~~~l~aa~eAl~dAG~~~~~~~~~~r~gvivgs~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~gl~  163 (424)
T PRK06333         84 TFAMAAAKEAIAQAGWDPDNLPDRERTATIIGSGVGGFPAIAEAVRTLDSRGPRRLSPFTIPSFLTNMAAGHVSIRYGFK  163 (424)
T ss_pred             HHHHHHHHHHHHHCCCCHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
T ss_conf             99999999999975998246267765799996256856889999999975486544840345677668999999981998


Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC-----------C-----CCC---CC--------CC
Q ss_conf             773589841420358889987899997399976999503320145-----------8-----887---53--------34
Q gi|254781019|r  100 SSCRVVELKQACYSATCALHMACALVAKSPERKVLIVASDVARYD-----------L-----GSS---GE--------PT  152 (396)
Q Consensus       100 ~~~~~~Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~-----------~-----~~~---~~--------~t  152 (396)
                      ..  ++-+..||++++.||..|..+|++|....+||.++|.....           +     .++   .+        +.
T Consensus       164 Gp--~~tv~tACsSsl~Ai~~A~~~i~~G~~d~aivGg~~~~l~~~~~~~f~~~~~Ls~~~~~~p~~~~rPFD~~~dG~v  241 (424)
T PRK06333        164 GP--LGAPVTACAAGVQAIGDAARLIRSGEADVAICGGTEAAIDRVSLAGFAAARALSTRFNDAPEQASRPFDRARDGFV  241 (424)
T ss_pred             CC--CCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCE
T ss_conf             96--2150646079999999999999778706000355133227077899987666512788885435651126899714


Q ss_pred             CCCCEEEEEECCC-------CCCCEEEECCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHH
Q ss_conf             7830246884268-------763035310001567865112758875423566016989999999999999996298821
Q gi|254781019|r  153 QGCGAVAILISSQ-------TSILEIEDITGIYTNDCMDFWRPNYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHDFN  225 (396)
Q Consensus       153 ~GaGA~Allv~~~-------~~~~~~~~~~~~~~~~~~df~rp~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~~  225 (396)
                      .|.||+++++.+.       ..+......++... |......|    .+  +        .+....++++.+++.|++++
T Consensus       242 ~gEGa~~~vLe~~~~A~~rg~~i~a~i~G~g~~~-d~~~~~~~----~~--~--------~~~~~~~m~~Al~~agi~~~  306 (424)
T PRK06333        242 MGEGAGILVIETLEHALARGAPPLAELVGYGTTA-DAYHITSG----PE--D--------GEGARRAMEGALRQAGIPPE  306 (424)
T ss_pred             ECCCCCHHHCCCHHHHHHCCCCEEEEEEEEEEEC-CCCCCCCC----CC--C--------HHHHHHHHHHHHHHCCCCCC
T ss_conf             0785212311668778658996689998789857-99888889----98--8--------36779999999998499914


Q ss_pred             HCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
Q ss_conf             10123311454057888886411024544100134555433344453238543233899999999
Q gi|254781019|r  226 DFQYFCYHQPFTRMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALISLL  290 (396)
Q Consensus       226 did~~v~H~p~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~slL  290 (396)
                      ||+|+..|-.+.+..+....+-........      ..+ +....-..+|++.+||=.+.|...+
T Consensus       307 ~i~yI~aHgtgT~~gD~~E~~al~~~fg~~------~~~-~i~S~K~~~GH~~~aaG~~~~i~~~  364 (424)
T PRK06333        307 QVQHLNAHATSTPVGDLGEVAAIKKVFGHV------KGL-AISSTKSATGHLLGAAGGVEAIFTI  364 (424)
T ss_pred             CCCEEEECCCCCCCCCHHHHHHHHHHHCCC------CCC-CCCCCHHHHCCCHHHHHHHHHHHHH
T ss_conf             518799527878666999999999985878------888-6478111003257889999999999


No 65 
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=99.00  E-value=1.5e-07  Score=65.99  Aligned_cols=253  Identities=12%  Similarity=0.059  Sum_probs=131.8

Q ss_pred             HCCCCEEEECCCCCCHHHHHHHHHHHHHHHCC---H-HHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCH
Q ss_conf             03832466559985999999999999997279---5-7868999945788754600588886320268773589841420
Q gi|254781019|r   36 GIGQERMSVLNPDEDIVTMAAAAALPIMQNQD---K-NLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQAC  111 (396)
Q Consensus        36 ~lGi~~r~v~~~~Ed~~tmA~~Aa~~~L~~~~---~-~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC  111 (396)
                      |.|+....--.++-+...|+++|+++||++++   | +|||.++.+.........-...+....+|+. ..+.   ...|
T Consensus         8 GvG~t~f~~~~~d~s~~eL~~eA~~~Al~DAG~~~~~~did~~~~~~~~~~~g~~~~~~~~~~~lG~~-~~p~---~~v~   83 (375)
T PRK06066          8 GIGWYGFKPTTPDLSFREMMFEAAVRAYEDAGGINPRRDVDAFISCQEDFWEGIAISDEFAPDPIGGA-MRPT---MTVA   83 (375)
T ss_pred             ECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHEEEEEECCCCCCCCHHHHHHHHHHHHCCC-CCCE---EEEE
T ss_conf             61367768999998999999999999999679998665600676613333440557877658762466-7854---8852


Q ss_pred             HHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCC----------CCC---------------------------------
Q ss_conf             3588899878999973999769995033201458----------887---------------------------------
Q gi|254781019|r  112 YSATCALHMACALVAKSPERKVLIVASDVARYDL----------GSS---------------------------------  148 (396)
Q Consensus       112 ~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~~----------~~~---------------------------------  148 (396)
                      .++..||..|...|++|....+||++.+..+...          +..                                 
T Consensus        84 ~~G~~al~~A~~aIaSG~~dvvlv~g~~k~s~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~al~A~rym~~yG~t~E~lA  163 (375)
T PRK06066         84 GDGLQGLAHAYMHINSGLADVVVVESHAKPSDILTFPDVVKFAMDPIYLRPLGPPNPHFLAGLEAVKFMARRGVTREDLA  163 (375)
T ss_pred             CHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHHH
T ss_conf             77999999999999719888899970446677665111444046855002368765999999999999988697999999


Q ss_pred             ------------------------------------CC----CCCCCCEEEEEECCCCCC-------CEEEECCCCCCCC
Q ss_conf             ------------------------------------53----347830246884268763-------0353100015678
Q gi|254781019|r  149 ------------------------------------GE----PTQGCGAVAILISSQTSI-------LEIEDITGIYTND  181 (396)
Q Consensus       149 ------------------------------------~~----~t~GaGA~Allv~~~~~~-------~~~~~~~~~~~~~  181 (396)
                                                          .+    ..-.|||+|+++.++...       +.+... +..+ +
T Consensus       164 ~vavk~r~~A~~NP~A~~~~~~t~edvl~s~~ia~PL~~~dc~~~sDGAaA~Vv~s~~~A~~~~~~pv~i~g~-g~~~-~  241 (375)
T PRK06066        164 LVVEKNKKAGLKNPRASYASNVSLDDVLSSEYVVYPLTELDIAPFVDGAIVVVLASEEVARKLTDTPVWIKGI-GWAT-D  241 (375)
T ss_pred             HHHHHHHHHHHHCCHHHCCCCCCHHHHCCCCCEECCCCCCCCCCCCCCEEEEEEECHHHHHHCCCCCEEEEEE-EEEC-C
T ss_conf             9999999988539840306999999980797650575300226676842899993589997568998899999-9852-6


Q ss_pred             CCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCC--HHHCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHH
Q ss_conf             651127588754235660169899999999999999962988--211012331145405788888641102454410013
Q gi|254781019|r  182 CMDFWRPNYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHD--FNDFQYFCYHQPFTRMAEKAHIRLSKIVHQNLSVAE  259 (396)
Q Consensus       182 ~~df~rp~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~--~~did~~v~H~p~~k~~~~~~~~l~~~~~~~~~~~~  259 (396)
                         ...+...++.          .......+.+...+..|++  .+|||.+-+|-+|.-+.......+... .+  ....
T Consensus       242 ---~~~~~~~~~~----------~~~~~~~a~~~Ay~~Agi~~p~~DiDv~elyD~ft~~~l~~lE~lG~~-ge--g~~~  305 (375)
T PRK06066        242 ---TSNLETADLG----------KAMYMRKAADMAYKMAGIASPAKEVDFAFVDDRYSYKELQHIEALGLA-GK--AAKD  305 (375)
T ss_pred             ---CCCCCCCCCC----------CCHHHHHHHHHHHHHCCCCCCHHHCCEEEECCCCCHHHHHHHHHCCCC-CH--HHHH
T ss_conf             ---8776622345----------336899999999998079998666615575166619999999984898-42--8899


Q ss_pred             HH---------HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH-----CCCCCCCCEEEEEEECCCC
Q ss_conf             45---------5543334445323854323389999999971-----5743698889998407983
Q gi|254781019|r  260 IE---------KAIGITTLYNRLIGNSYTASLYIALISLLDH-----SSENLAGKRVGFFSYGSGC  311 (396)
Q Consensus       260 ~e---------~~~~~~~~~~~~~GN~~SASi~l~L~slLe~-----~~~~~~G~rIll~syGsG~  311 (396)
                      ++         -.++++-=.. -.||...++=...+.++..|     ..+..+|-++++...+-|.
T Consensus       306 ~~~G~~~~~G~~PvNtsGG~l-s~Ghp~ga~G~~~~~E~~~QLrg~ag~RQV~gA~~gl~~~~g~~  370 (375)
T PRK06066        306 LREGYFEPGGELPVNPSGGHL-AKGVPLEASGLSLLLDAVEYLRQGGVERAVVASWRGIPTFTGSV  370 (375)
T ss_pred             HHCCCCCCCCCCCEECCCCHH-HCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCEE
T ss_conf             977995679982060898244-28985750699999999999743530432167887013376439


No 66 
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=98.97  E-value=4e-07  Score=63.27  Aligned_cols=99  Identities=16%  Similarity=0.203  Sum_probs=83.8

Q ss_pred             CCCCHHHHHHHHHHHHHHHC--CHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHH
Q ss_conf             98599999999999999727--9578689999457887546005888863202687735898414203588899878999
Q gi|254781019|r   47 PDEDIVTMAAAAALPIMQNQ--DKNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACAL  124 (396)
Q Consensus        47 ~~Ed~~tmA~~Aa~~~L~~~--~~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~  124 (396)
                      .+..+.+|++.+.+.+|++.  +|++||.||++...+.-...-.+-.+.-..|++..++++-++..|.+++.|+.+|...
T Consensus        22 ~~~~~~~L~a~~i~~~l~r~~i~p~~Id~Vi~G~v~~~g~g~n~aR~~aL~aGlp~~vp~~tVnr~C~SGl~Ai~~Aa~~  101 (392)
T PRK05656         22 ANIPAVDLGAAVIRQLLEQTGLDPAQVDEVILGQVLTAGAGQNPARQAAIKAGLPHSVPAMTLNKVCGSGLKALHLAAQA  101 (392)
T ss_pred             CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHH
T ss_conf             89988999999999999983999899898999904765666639999999779998886489852536778999999999


Q ss_pred             HHCCCCCEEEEEECCCCCCCC
Q ss_conf             973999769995033201458
Q gi|254781019|r  125 VAKSPERKVLIVASDVARYDL  145 (396)
Q Consensus       125 i~sg~~~~aLVV~sD~~~~~~  145 (396)
                      |++|....+|+.+.|.++..+
T Consensus       102 I~~G~~dv~iagGvEsmS~~P  122 (392)
T PRK05656        102 IRCGDAEVIIAGGQENMSLAP  122 (392)
T ss_pred             HHCCCCCEEEEECCCCCCCCC
T ss_conf             866997578983433367886


No 67 
>PRK09051 beta-ketothiolase; Provisional
Probab=98.96  E-value=4e-07  Score=63.29  Aligned_cols=100  Identities=9%  Similarity=0.037  Sum_probs=83.5

Q ss_pred             CCCCCHHHHHHHHHHHHHHHC--CHHHCCEEEEECCCCCCC-CHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHH
Q ss_conf             998599999999999999727--957868999945788754-60058888632026877358984142035888998789
Q gi|254781019|r   46 NPDEDIVTMAAAAALPIMQNQ--DKNLIDTLFFATESSVDQ-SKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMAC  122 (396)
Q Consensus        46 ~~~Ed~~tmA~~Aa~~~L~~~--~~~~Id~li~~T~t~~~~-~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~  122 (396)
                      -.+..+.+|++.+.+.+|++.  +|++||.||++...+... ....+-...-..|++.+++++-++.+|.+++.|+.+|.
T Consensus        22 l~~~~~~~L~a~~i~~~l~r~~i~p~~Id~Vi~G~v~~~g~~~~niaR~aal~aGlp~~vp~~tVnr~C~SGl~Ai~~Aa  101 (394)
T PRK09051         22 LKDFAPTDLGAIVVREALARAGVDGDQVGHVVFGHVIPTEPRDMYLSRVAAINAGVPQETPALNVNRLCGSGLQAIVSAA  101 (394)
T ss_pred             CCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHH
T ss_conf             78998899999999999987198989989799992355676676789999997699988871887155477899999999


Q ss_pred             HHHHCCCCCEEEEEECCCCCCCC
Q ss_conf             99973999769995033201458
Q gi|254781019|r  123 ALVAKSPERKVLIVASDVARYDL  145 (396)
Q Consensus       123 ~~i~sg~~~~aLVV~sD~~~~~~  145 (396)
                      ..|++|....+|+.+.|.++..+
T Consensus       102 ~~I~~G~~d~viAGGvEsmS~~P  124 (394)
T PRK09051        102 QAILLGDADVAIGGGAESMSRAP  124 (394)
T ss_pred             HHHHCCCCCEEEEECCHHCCCCC
T ss_conf             99976998877872410203585


No 68 
>PRK07124 consensus
Probab=98.96  E-value=1.4e-08  Score=72.33  Aligned_cols=99  Identities=13%  Similarity=0.092  Sum_probs=85.3

Q ss_pred             CCCCHHHHHHHHHHHHHHHC--CHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHH
Q ss_conf             98599999999999999727--9578689999457887546005888863202687735898414203588899878999
Q gi|254781019|r   47 PDEDIVTMAAAAALPIMQNQ--DKNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACAL  124 (396)
Q Consensus        47 ~~Ed~~tmA~~Aa~~~L~~~--~~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~  124 (396)
                      .+.++.+|+..|++.+|++.  +|++||.+++++..+.......+-.+.-..|++..++++.++.+|.++..|+.+|...
T Consensus        22 ~~~~~~~L~~~ai~~al~~~~i~~~~Id~vi~G~v~~~g~g~n~ar~~al~aGlp~~iP~~tV~~aCaSG~~Ai~~A~~~  101 (402)
T PRK07124         22 KSVPAGELAGVAIKGALEQAKVSPEAIDEVIVGNVVSAGQGMGPGRQAAIFAGIPEEVPAYSLNMVCGSGMKTVMDAVSH  101 (402)
T ss_pred             CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHH
T ss_conf             89999999999999999983989899998999934755556679999999769998885699725778999999999999


Q ss_pred             HHCCCCCEEEEEECCCCCCCC
Q ss_conf             973999769995033201458
Q gi|254781019|r  125 VAKSPERKVLIVASDVARYDL  145 (396)
Q Consensus       125 i~sg~~~~aLVV~sD~~~~~~  145 (396)
                      |++|....+|+++.|..+..+
T Consensus       102 I~sG~~dvvlagGvEsmS~~P  122 (402)
T PRK07124        102 IKAGDAEVVVAAGVEVMSQIP  122 (402)
T ss_pred             HHCCCCCEEEECCEECCCCCC
T ss_conf             867997678965510156676


No 69 
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=98.94  E-value=1.3e-07  Score=66.32  Aligned_cols=216  Identities=16%  Similarity=0.164  Sum_probs=125.1

Q ss_pred             HHHHHHHHHHHHHCC--HHHCC----EEEEECCCCCCCC------------------HH-HHHHHHHHHCCCCCCEEEEE
Q ss_conf             999999999997279--57868----9999457887546------------------00-58888632026877358984
Q gi|254781019|r   53 TMAAAAALPIMQNQD--KNLID----TLFFATESSVDQS------------------KS-AAIWLHKLLGLNSSCRVVEL  107 (396)
Q Consensus        53 tmA~~Aa~~~L~~~~--~~~Id----~li~~T~t~~~~~------------------~~-~a~~v~~~Lgl~~~~~~~Di  107 (396)
                      -|+++++.+||++++  +++++    -|++++....+..                  ++ .+..|...|++..-  ++-+
T Consensus        89 rl~L~~a~~Al~dAG~~~~~l~~~r~GV~vG~~~~d~~~~~~~~~~~~~~~~~~~~~~s~~a~ris~~~~l~Gp--~~~v  166 (424)
T smart00825       89 RLLLEVAWEALEDAGIDPESLRGSRTGVFVGAMSSDYAELLARDPEDIEGYAATGTARSFIANRISYFFDLRGP--SVTV  166 (424)
T ss_pred             HHHHHHHHHHHHHCCCCHHHCCCCCEEEEEEECCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC--EEEE
T ss_conf             99999999999973998356588743899975166377776417555785202453176899999998589996--3514


Q ss_pred             CCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC-------------CCCCCC--------CCCCCCEEEEEECCC-
Q ss_conf             1420358889987899997399976999503320145-------------888753--------347830246884268-
Q gi|254781019|r  108 KQACYSATCALHMACALVAKSPERKVLIVASDVARYD-------------LGSSGE--------PTQGCGAVAILISSQ-  165 (396)
Q Consensus       108 ~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~-------------~~~~~~--------~t~GaGA~Allv~~~-  165 (396)
                      ..||++++.||..|..+|++|....+||-+++.....             ++...+        +..|.|++++++.+. 
T Consensus       167 dtACsSsl~Al~~A~~~i~~G~~D~alvGg~~~~~~p~~~~~~~~~~~lS~~g~~rpFD~~adG~v~gEGa~~lvLk~l~  246 (424)
T smart00825      167 DTACSSSLVALHLACQSLRSGECDMALAGGVNLILSPDTFVGFSRAGMLSPDGRCKTFDADADGYVRGEGVGVVVLKRLS  246 (424)
T ss_pred             CCHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHH
T ss_conf             14728999999999999976996330014266734878999986157879999875577889984104765799746599


Q ss_pred             ------CCCCEEEECCCCCCCC-CCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCCH
Q ss_conf             ------7630353100015678-651127588754235660169899999999999999962988211012331145405
Q gi|254781019|r  166 ------TSILEIEDITGIYTND-CMDFWRPNYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHDFNDFQYFCYHQPFTR  238 (396)
Q Consensus       166 ------~~~~~~~~~~~~~~~~-~~df~rp~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~~did~~v~H~p~~k  238 (396)
                            +++.......+..... ...+..|+                .+...+++++.+++.+++++||+|+-.|-.+.+
T Consensus       247 ~A~~~g~~Iya~I~G~~~~~dG~~~~~~~P~----------------~~~~~~~~~~Al~~a~i~p~~I~yieaHgtgt~  310 (424)
T smart00825      247 DALRDGDPILAVIRGSAVNQDGRSNGLTAPS----------------GPAQARLIRQALARAGVDPADVDYVEAHGTGTP  310 (424)
T ss_pred             HHHHCCCCEEEEEECEEEECCCCCCCCCCCC----------------HHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCC
T ss_conf             9987699179999343782589878778999----------------899999999999982989664687996036687


Q ss_pred             HHHHHHHHHCCHH-HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
Q ss_conf             7888886411024-544100134555433344453238543233899999999
Q gi|254781019|r  239 MAEKAHIRLSKIV-HQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALISLL  290 (396)
Q Consensus       239 ~~~~~~~~l~~~~-~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~slL  290 (396)
                      +.+.....-.... .+...   -...+. ....-..+|++.+||=.++|...+
T Consensus       311 ~gD~~E~~al~~~f~~~~~---~~~~~~-igS~K~~~GH~~~AaG~~~lik~~  359 (424)
T smart00825      311 LGDPIEAEALAAVFGQGRP---RDGPLL-LGSVKSNIGHLEAAAGVAGLIKVV  359 (424)
T ss_pred             CCCHHHHHHHHHHHCCCCC---CCCCEE-ECCCCCCCCCCHHHHHHHHHHHHH
T ss_conf             7799999999999623688---778425-204534423337778999999999


No 70 
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=98.94  E-value=2.1e-06  Score=58.81  Aligned_cols=98  Identities=13%  Similarity=0.142  Sum_probs=83.3

Q ss_pred             CCCCHHHHHHHHHHHHHHHC--CHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHH
Q ss_conf             98599999999999999727--9578689999457887546005888863202687735898414203588899878999
Q gi|254781019|r   47 PDEDIVTMAAAAALPIMQNQ--DKNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACAL  124 (396)
Q Consensus        47 ~~Ed~~tmA~~Aa~~~L~~~--~~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~  124 (396)
                      .+..+.+|++.+.+.+|++.  +|++||-||++.........-.+-...-..|++.+++++.++..|.+++.|+.+|...
T Consensus        23 ~~~~~~~L~a~vi~~~l~r~~i~p~~Id~Vi~G~v~~~~~g~n~AR~aaL~aGlp~~vp~~TVnr~C~SGl~Ai~~aa~~  102 (392)
T PRK06633         23 STTPAPMLAAHLIKDILQNSKIDPALVNEVILGQVITGGSGQNPARQTLIHAGIPKEVPGYTINKVCGSGLKSVALAANS  102 (392)
T ss_pred             CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHH
T ss_conf             88988999999999999874999899998999915756656669999999769998887268877337999999999999


Q ss_pred             HHCCCCCEEEEEECCCCCCC
Q ss_conf             97399976999503320145
Q gi|254781019|r  125 VAKSPERKVLIVASDVARYD  144 (396)
Q Consensus       125 i~sg~~~~aLVV~sD~~~~~  144 (396)
                      |++|....+++.+.|.++..
T Consensus       103 I~~G~~dvviaGGvEsmS~~  122 (392)
T PRK06633        103 IMTGDNEIVIAGGQENMSLG  122 (392)
T ss_pred             HHCCCCCEEEEECCCCCCCC
T ss_conf             96799867774033545544


No 71 
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=98.94  E-value=1.7e-07  Score=65.56  Aligned_cols=216  Identities=16%  Similarity=0.135  Sum_probs=124.1

Q ss_pred             HHHHHHHHHHHHHHHCC--H-----HHCCEEEEECCCCC---------------------CCCH-----HHHHHHHHHHC
Q ss_conf             99999999999997279--5-----78689999457887---------------------5460-----05888863202
Q gi|254781019|r   51 IVTMAAAAALPIMQNQD--K-----NLIDTLFFATESSV---------------------DQSK-----SAAIWLHKLLG   97 (396)
Q Consensus        51 ~~tmA~~Aa~~~L~~~~--~-----~~Id~li~~T~t~~---------------------~~~~-----~~a~~v~~~Lg   97 (396)
                      ...+|+.|++.||++++  +     +.++. +++|..+.                     +..|     ..+.+|...++
T Consensus       134 ~~~~al~Aa~eAl~DAgl~~~~~~~~r~Gv-~iGs~~gg~~~~e~~~~~l~~~g~~~v~p~~~~~~~~n~~a~~is~~~~  212 (477)
T PTZ00050        134 CTHYAVAATRLAIDDAKIDLEKIDCDKTGT-IIGSGIGGLLFLEKEMKTLYEKGHKRISPYLIPAMIANTPAGFVSIEHN  212 (477)
T ss_pred             HHHHHHHHHHHHHHHCCCCCCCCCCCCCCE-EEECCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCC
T ss_conf             999999999999996799954367101534-8704877389999999999854977438527778887699999999739


Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC-----------C-----CCC---CCC-------
Q ss_conf             68773589841420358889987899997399976999503320145-----------8-----887---533-------
Q gi|254781019|r   98 LNSSCRVVELKQACYSATCALHMACALVAKSPERKVLIVASDVARYD-----------L-----GSS---GEP-------  151 (396)
Q Consensus        98 l~~~~~~~Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~-----------~-----~~~---~~~-------  151 (396)
                      +..-  .+-+..||++++.||..|..+|++|....+|+-++|.....           +     +++   .+|       
T Consensus       213 l~Gp--s~ti~tACaSs~~AI~~A~~~Ir~G~~d~~IaGG~d~~l~p~~~~~f~~l~aL~s~~nd~P~~~~rPFD~~rdG  290 (477)
T PTZ00050        213 IRGI--SLGMLSACATSGNTIGEAYRYIKYKEYDVMICGGTEASITPISFAGFNALKALCSGYNDNPKKGCRPFDLKRSG  290 (477)
T ss_pred             CCCC--CCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
T ss_conf             9487--56704474788999999999997598455999845666672889999987655403678987672446589982


Q ss_pred             -CCCCCEEEEEECCCC-------CCCEEEECCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             -478302468842687-------630353100015678651127588754235660169899999999999999962988
Q gi|254781019|r  152 -TQGCGAVAILISSQT-------SILEIEDITGIYTNDCMDFWRPNYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHD  223 (396)
Q Consensus       152 -t~GaGA~Allv~~~~-------~~~~~~~~~~~~~~~~~df~rp~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~  223 (396)
                       ..|-||+++++++..       .+.......+.. .|......|    .|  +        .+.+.+++++.+++.+++
T Consensus       291 ~V~GEGag~lVLE~~e~A~~RGa~Iyaei~G~~~~-~Dg~~~t~p----~p--~--------g~g~~~am~~AL~~Agl~  355 (477)
T PTZ00050        291 FVMGEGAGILILESYEHAIKRNAKIYGEIIAYSSE-CDAFHITAP----EP--N--------GKGLCNSIHKAIKNANIN  355 (477)
T ss_pred             EEECCCEEEEEEEEHHHHHHCCCEEEEEEECCCCC-CCCCCCCCC----CC--C--------HHHHHHHHHHHHHHHCCC
T ss_conf             77237658999728877765899886752055424-689988774----97--9--------999999999999971789


Q ss_pred             HHHCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
Q ss_conf             2110123311454057888886411024544100134555433344453238543233899999999
Q gi|254781019|r  224 FNDFQYFCYHQPFTRMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALISLL  290 (396)
Q Consensus       224 ~~did~~v~H~p~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~slL  290 (396)
                      ++||||+..|-.+.++.+....+-...+-.+..     .++ +....=..+|++-.|+=-+.+...+
T Consensus       356 ~~dIdyInaHGTgT~~gD~~E~~Ai~~vfg~~~-----~~~-~VsS~Ks~iGH~lgAAGa~e~i~~l  416 (477)
T PTZ00050        356 INDVKYINAHGTSTNLNDKIETKVFKNVFKDHA-----YKL-HISSTKSMTGHCIGAAGAIESIVCL  416 (477)
T ss_pred             CCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCC-----CCC-EEECCHHHHCCCHHHHHHHHHHHHH
T ss_conf             745008996177688789999999999865789-----986-5888613330047999999999999


No 72 
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=98.93  E-value=1.3e-06  Score=60.20  Aligned_cols=98  Identities=15%  Similarity=0.194  Sum_probs=81.2

Q ss_pred             CCCCHHHHHHHHHHHHHHHC--CHHHCCEEEEECCCCCC-CCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHH
Q ss_conf             98599999999999999727--95786899994578875-4600588886320268773589841420358889987899
Q gi|254781019|r   47 PDEDIVTMAAAAALPIMQNQ--DKNLIDTLFFATESSVD-QSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACA  123 (396)
Q Consensus        47 ~~Ed~~tmA~~Aa~~~L~~~--~~~~Id~li~~T~t~~~-~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~  123 (396)
                      .+-.+.+|++.+.+.++++.  +|++||-||++.....- .....+-++.=.-|++.+++++-++..|.+++.|+.+|..
T Consensus        25 ~~~~~~~Lga~~i~~~l~r~gi~p~~ID~Vi~G~v~~~g~~g~n~aR~aaL~AGlp~~vpa~TVnr~C~SGl~Ai~~aa~  104 (417)
T PRK06025         25 AHLHPQHLAATVLKALAERNGLNTADVDDIIWSTSSQRGKQGGDLGRMAALDAGYDIKASGVTLDRFCGGGITSVNLAAA  104 (417)
T ss_pred             CCCCHHHHHHHHHHHHHHHHCCCHHHCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHH
T ss_conf             99989999999999999870989799898999807776543465999999967999888607875746408999999999


Q ss_pred             HHHCCCCCEEEEEECCCCCCC
Q ss_conf             997399976999503320145
Q gi|254781019|r  124 LVAKSPERKVLIVASDVARYD  144 (396)
Q Consensus       124 ~i~sg~~~~aLVV~sD~~~~~  144 (396)
                      .|++|....+++.+.|.+++.
T Consensus       105 ~I~~G~~dvviAGGvEsmS~~  125 (417)
T PRK06025        105 QIMSGMEDLVIAGGTEMMSYT  125 (417)
T ss_pred             HHHCCCCCEEEEEEEECCCCC
T ss_conf             997699986789534236766


No 73 
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=98.93  E-value=1.3e-07  Score=66.26  Aligned_cols=98  Identities=8%  Similarity=0.077  Sum_probs=81.1

Q ss_pred             CCCCHHHHHHHHHHHHHHHC--CHHHCCEEEEECCCCCC-CCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHH
Q ss_conf             98599999999999999727--95786899994578875-4600588886320268773589841420358889987899
Q gi|254781019|r   47 PDEDIVTMAAAAALPIMQNQ--DKNLIDTLFFATESSVD-QSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACA  123 (396)
Q Consensus        47 ~~Ed~~tmA~~Aa~~~L~~~--~~~~Id~li~~T~t~~~-~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~  123 (396)
                      .+..+.+|++.+.+.+|++.  +|++||-||++...+.- ...-.+-...=.-|++.+++++-++..|.+++.|+.+|..
T Consensus        23 ~~~~~~eL~a~~i~~~l~r~gi~~~~Id~Vi~G~v~~~g~~g~n~aR~aaL~aGlp~~vpa~tVnr~C~SGl~Ai~~Aa~  102 (392)
T PRK07108         23 NMTHGATLGGHVVAAAVERAKLDPARVEDVIMGCANPEGATGANIARQIALRAGLPVTVPGMTVNRFCSSGLQTIALAAQ  102 (392)
T ss_pred             CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHH
T ss_conf             89999999999999999870989899998999946655655577999999966999888627775745553899999987


Q ss_pred             HHHCCCCCEEEEEECCCCCCC
Q ss_conf             997399976999503320145
Q gi|254781019|r  124 LVAKSPERKVLIVASDVARYD  144 (396)
Q Consensus       124 ~i~sg~~~~aLVV~sD~~~~~  144 (396)
                      .|++|....+|+.+.|.++..
T Consensus       103 ~I~~G~~dv~iAGGvEsmS~~  123 (392)
T PRK07108        103 RIIAGEGDVFVAGGVESISCV  123 (392)
T ss_pred             HHHCCCCCEEEEECEECCCCC
T ss_conf             863899986788045114557


No 74 
>PRK05790 acetyl-CoA acetyltransferase; Provisional
Probab=98.93  E-value=2.6e-08  Score=70.72  Aligned_cols=99  Identities=12%  Similarity=0.129  Sum_probs=84.2

Q ss_pred             CCCCHHHHHHHHHHHHHHHC--CHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHH
Q ss_conf             98599999999999999727--9578689999457887546005888863202687735898414203588899878999
Q gi|254781019|r   47 PDEDIVTMAAAAALPIMQNQ--DKNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACAL  124 (396)
Q Consensus        47 ~~Ed~~tmA~~Aa~~~L~~~--~~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~  124 (396)
                      .+..+.+|+..+++.+|++.  +|++||.++++...+.....-.+-.+.-..|++.+++++-++.+|.+++.|+..|...
T Consensus        22 ~~~~~~~L~~~ai~~~l~r~gi~~~~Id~vi~G~~~~~g~g~n~aR~~~l~aGlp~~vp~~tV~r~CaSG~~Ai~~A~~~  101 (393)
T PRK05790         22 KDVSAVELGAIVIKAALERAGVPPEQVDEVIMGQVLQAGAGQNPARQAAIKAGLPVEVPALTINKVCGSGLKAVALAAQA  101 (393)
T ss_pred             CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHH
T ss_conf             88999999999999999982989899998999933656655549999999679998876489963115768999999998


Q ss_pred             HHCCCCCEEEEEECCCCCCCC
Q ss_conf             973999769995033201458
Q gi|254781019|r  125 VAKSPERKVLIVASDVARYDL  145 (396)
Q Consensus       125 i~sg~~~~aLVV~sD~~~~~~  145 (396)
                      |++|....+|+++.|.++..+
T Consensus       102 I~sG~~dvvlagGvEsmS~~P  122 (393)
T PRK05790        102 IRAGDADIVVAGGQESMSQAP  122 (393)
T ss_pred             HHCCCCCEEEEECCCCCCCCC
T ss_conf             747997689995443245674


No 75 
>PRK07937 lipid-transfer protein; Provisional
Probab=98.92  E-value=1.7e-07  Score=65.54  Aligned_cols=87  Identities=13%  Similarity=0.033  Sum_probs=65.9

Q ss_pred             CHHHHHHHHHHHHHHHCC--HHHCCEEEEECCCCCCCCHHHHHHH--HHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHH
Q ss_conf             999999999999997279--5786899994578875460058888--632026877358984142035888998789999
Q gi|254781019|r   50 DIVTMAAAAALPIMQNQD--KNLIDTLFFATESSVDQSKSAAIWL--HKLLGLNSSCRVVELKQACYSATCALHMACALV  125 (396)
Q Consensus        50 d~~tmA~~Aa~~~L~~~~--~~~Id~li~~T~t~~~~~~~~a~~v--~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i  125 (396)
                      +..+|+++|++++|++++  ++|||.++.++.  ++.....-+.+  ...+|.   .+.+.+.++|.++..|+..|...|
T Consensus        23 ~~~eL~~eA~~~Al~DAGl~~~DId~~~~g~~--d~~~G~~~~~~~~~~~lg~---~p~~~~~~~~~sg~~Al~~A~~aI   97 (352)
T PRK07937         23 NGVEMLMPCFAQLYEELGITKADIGFWCSGSS--DYLAGRAFSFISAIDSIGA---VPPINESHVEMDAAWALYEAYIKI   97 (352)
T ss_pred             CHHHHHHHHHHHHHHHCCCCHHHCCEEEEECC--CCCCCCCHHHHHHHHHCCC---CCCEEEECEECCHHHHHHHHHHHH
T ss_conf             99999999999999984999899978967146--5345410135777764368---774533010222999999999998


Q ss_pred             HCCCCCEEEEEECCCC
Q ss_conf             7399976999503320
Q gi|254781019|r  126 AKSPERKVLIVASDVA  141 (396)
Q Consensus       126 ~sg~~~~aLVV~sD~~  141 (396)
                      ++|....+||++.+..
T Consensus        98 ~sG~~d~vLvvG~ek~  113 (352)
T PRK07937         98 LTGEVDTALVYGFGKS  113 (352)
T ss_pred             HCCCCCEEEEEEECCC
T ss_conf             6789998999873366


No 76 
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.90  E-value=7.5e-07  Score=61.60  Aligned_cols=179  Identities=19%  Similarity=0.169  Sum_probs=104.9

Q ss_pred             HHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC-----------CCC----CCC---
Q ss_conf             05888863202687735898414203588899878999973999769995033201-----------458----887---
Q gi|254781019|r   87 SAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACALVAKSPERKVLIVASDVAR-----------YDL----GSS---  148 (396)
Q Consensus        87 ~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~-----------~~~----~~~---  148 (396)
                      ..+..|...+|+...  .+-+..||++++.||..|..+|++|....+|+.++|...           ..+    +.+   
T Consensus       153 ~~a~~ia~~~gl~Gp--~~tvstACASg~~AI~~A~~~Ir~G~~D~~iaGG~d~~~~~~~~~~f~~~~aLs~~~d~P~~a  230 (425)
T PRK06501        153 SIADRLADRFGTRGL--PITLSTACASGATAIQLGVEAIRRGETDRALCIATDGSVSAEALIRFSLLSALSTQNDPPEKA  230 (425)
T ss_pred             HHHHHHHHHHCCCCC--CCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHCHHCCCCCCCCC
T ss_conf             999999998689998--714222627899999999999975898889993320343628888988632332078997767


Q ss_pred             CC--------CCCCCCEEEEEECCCC-------CCCEEEECCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHH
Q ss_conf             53--------3478302468842687-------63035310001567865112758875423566016989999999999
Q gi|254781019|r  149 GE--------PTQGCGAVAILISSQT-------SILEIEDITGIYTNDCMDFWRPNYRRTALVDGKYSTKIYLQSLEAVW  213 (396)
Q Consensus       149 ~~--------~t~GaGA~Allv~~~~-------~~~~~~~~~~~~~~~~~df~rp~~~~~~~~dg~~~~~~y~~~~~~a~  213 (396)
                      .+        +..|-||+++++++..       ++......++. +.|......|..      +        .+.+.+++
T Consensus       231 ~RPFD~~RdG~v~GEGaa~lVLE~~~~A~~RGA~I~a~i~g~g~-~~d~~~~~~~~p------~--------~~~~~~~~  295 (425)
T PRK06501        231 SKPFSKDRDGFVMAEGAGALVLESLESAVARGAKILGILAGCGE-KADSFHRTRSSP------D--------GSPAIGCV  295 (425)
T ss_pred             CCCCCCCCCCEEECCCEEEEEECCHHHHHHCCCEEEEEEECCEE-CCCCCCCCCCCC------C--------HHHHHHHH
T ss_conf             67788899863535707999833377798689969999846276-478988877998------8--------69999999


Q ss_pred             HHHHHHCCCCHHHCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
Q ss_conf             999996298821101233114540578888864110245441001345554333444532385432338999999
Q gi|254781019|r  214 HDYQKNKGHDFNDFQYFCYHQPFTRMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALIS  288 (396)
Q Consensus       214 ~~~l~~~g~~~~did~~v~H~p~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~s  288 (396)
                      ++.+++.|++++||||+..|-.+.+.-+....+-...+..+.    . .. .|....=..+|++-.|+=.+.+..
T Consensus       296 ~~al~~Ag~~~~~i~~i~aHgtgT~~~D~~E~~ai~~~fg~~----~-~~-~~v~s~Ks~~GH~~gaaG~~e~~~  364 (425)
T PRK06501        296 RAALADAGLTEDQIDYINAHGTSTPENDKMEYLGLSAVFGER----L-SS-IPVSSNKSMIGHTLTAAGAVEAVF  364 (425)
T ss_pred             HHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCC----C-CC-CEEECCHHHHHHHHHHHHHHHHHH
T ss_conf             999998298824513798058768676799999999986356----8-99-868895343302379999999999


No 77 
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=98.89  E-value=7.8e-08  Score=67.69  Aligned_cols=97  Identities=15%  Similarity=0.107  Sum_probs=79.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHC---CHHHCCEEEEECCCCCCC-CHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHH
Q ss_conf             98599999999999999727---957868999945788754-60058888632026877358984142035888998789
Q gi|254781019|r   47 PDEDIVTMAAAAALPIMQNQ---DKNLIDTLFFATESSVDQ-SKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMAC  122 (396)
Q Consensus        47 ~~Ed~~tmA~~Aa~~~L~~~---~~~~Id~li~~T~t~~~~-~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~  122 (396)
                      .+-.+.+|++.+.+.+|++.   +|++||-+|++...+... ..-.+-.+.-..|++ .++++-++..|.+++.|+.+|.
T Consensus        23 ~~~~~~~L~a~~i~~~l~r~~~l~p~~Id~Vi~G~~~~~g~~g~n~aR~aaL~aGl~-~vpa~TVnr~C~SGl~Ai~~aa  101 (405)
T PRK07851         23 VDMRPDDLAAQMVRAALDKVPALDPHDIDDLMLGCGLPGGESGFNIARVVAVLLGYD-FLPGTTVNRYCSSSLQTTRMAF  101 (405)
T ss_pred             CCCCHHHHHHHHHHHHHHHCCCCCHHHCCEEEEECCCCCCCCCCCHHHHHHHHCCCC-CCCEEEECCCCCHHHHHHHHHH
T ss_conf             999999999999999998667979899898999837754643230999999973999-9863457560205799999999


Q ss_pred             HHHHCCCCCEEEEEECCCCCCC
Q ss_conf             9997399976999503320145
Q gi|254781019|r  123 ALVAKSPERKVLIVASDVARYD  144 (396)
Q Consensus       123 ~~i~sg~~~~aLVV~sD~~~~~  144 (396)
                      ..|++|....+|+.+.|.++..
T Consensus       102 ~~I~~G~~dvvlAGGvEsMS~~  123 (405)
T PRK07851        102 HAIKAGEGDAFISAGVETVSRF  123 (405)
T ss_pred             HHHHCCCCCEEEEECCCCCCCC
T ss_conf             9997699998999681715567


No 78 
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=98.89  E-value=1.5e-07  Score=65.86  Aligned_cols=261  Identities=15%  Similarity=0.057  Sum_probs=143.5

Q ss_pred             CC-CEEEEEEEECCCEEECHHHHHHHC--CCC---H-HH-------------HHHHCCCCEEEECCCC---------CCH
Q ss_conf             96-206688873489045599999870--999---8-79-------------7630383246655998---------599
Q gi|254781019|r    1 MA-IGIEDISFYTTNQYLDLSVIAEKY--RLD---V-AK-------------FYVGIGQERMSVLNPD---------EDI   51 (396)
Q Consensus         1 M~-vGI~~i~~y~P~~~v~~~~l~~~~--g~~---~-~k-------------~~~~lGi~~r~v~~~~---------Ed~   51 (396)
                      |+ |-|++||.-.|-- .+.+++-+..  |.+   + .+             ....+|..-..+..++         ...
T Consensus         6 m~rVvITGiG~vtp~G-~~~~e~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~   84 (415)
T PRK07103          6 MDEVVVTGVGVVSAIG-QGRQPFAAALLAGRHAFGVMRRPGRQLPDDPGAGPAPAFFGAEIDSLALPPMLDAHRRRASYS   84 (415)
T ss_pred             CCEEEEECCEEECCCC-CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCHHH
T ss_conf             9719998886378883-899999999975998656566566646687433344565564356666300288998755299


Q ss_pred             HHHHHHHHHHHHHHCCH-----HHCCEEEEECCCC---------------CCCCH---------HHHHHHHHHHCCCCCC
Q ss_conf             99999999999972795-----7868999945788---------------75460---------0588886320268773
Q gi|254781019|r   52 VTMAAAAALPIMQNQDK-----NLIDTLFFATESS---------------VDQSK---------SAAIWLHKLLGLNSSC  102 (396)
Q Consensus        52 ~tmA~~Aa~~~L~~~~~-----~~Id~li~~T~t~---------------~~~~~---------~~a~~v~~~Lgl~~~~  102 (396)
                      ..+++.|+..++++++.     ..+++++-++...               ....|         ..+.+|...+|+..  
T Consensus        85 ~~~a~~a~~~Al~dagl~~~~~~r~G~~vg~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~~gl~G--  162 (415)
T PRK07103         85 AQAALAAVREAWDDAALGDVDPLRIGLVVGGSNVQQRELALVHDAYRERPAFLRPSYGLSFMDSDLCGLCTEQFGIRG--  162 (415)
T ss_pred             HHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC--
T ss_conf             999999999999967999778775289999674658999999998556998137658887510589999999968999--


Q ss_pred             EEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC--------C------------CCCCCC--------CCCC
Q ss_conf             58984142035888998789999739997699950332014--------5------------888753--------3478
Q gi|254781019|r  103 RVVELKQACYSATCALHMACALVAKSPERKVLIVASDVARY--------D------------LGSSGE--------PTQG  154 (396)
Q Consensus       103 ~~~Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~--------~------------~~~~~~--------~t~G  154 (396)
                      +++-+..+|++++.||..|..+|++|....+|+.++|....        .            +....+        +..|
T Consensus       163 p~~tv~tACaSg~~Ai~~A~~~Ir~G~~D~ai~gG~~~~ls~~~~~~f~~lgals~~~~~~~P~~~~rPFD~~rdG~v~G  242 (415)
T PRK07103        163 VAFTVGGASASGQLAVIQAARLVQSGSVDACIAVGALMDLSYWECQALRSLGAMGSDRFADEPEAACRPFDQDRDGFIYG  242 (415)
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEC
T ss_conf             72010153215999999999999839999888426322205688999998677631446789876666010589964352


Q ss_pred             CCEEEEEECCCC-------CCCEEEECCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHC
Q ss_conf             302468842687-------6303531000156786511275887542356601698999999999999999629882110
Q gi|254781019|r  155 CGAVAILISSQT-------SILEIEDITGIYTNDCMDFWRPNYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHDFNDF  227 (396)
Q Consensus       155 aGA~Allv~~~~-------~~~~~~~~~~~~~~~~~df~rp~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~~di  227 (396)
                      -||+++++++..       ++......++... |......|      .-+|          ...++++.++..|++++||
T Consensus       243 EGa~~lvLE~~e~A~~RGa~i~a~i~G~g~~~-Da~~~~~p------~~~g----------~~~am~~Al~~Agl~~~~I  305 (415)
T PRK07103        243 EACGAIVVERAERARRRGVRPYAKLLGWSIRL-DATRGPAP------SLDG----------EMAVIRGALRRAGLGPADI  305 (415)
T ss_pred             CCEEEEEEHHHHHHHHCCCEEEEEEEEEEECC-CCCCCCCC------CHHH----------HHHHHHHHHHHCCCCCCCC
T ss_conf             76477633116668767995889983104514-78788899------7799----------9999999999829781230


Q ss_pred             CEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
Q ss_conf             123311454057888886411024544100134555433344453238543233899999999
Q gi|254781019|r  228 QYFCYHQPFTRMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALISLL  290 (396)
Q Consensus       228 d~~v~H~p~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~slL  290 (396)
                      ||+..|-...+..+.+..+-.+.+.-.        .. +....=..+|++-.||=-+.|...+
T Consensus       306 dyI~aHgTgT~~~D~~E~~Al~~~fg~--------~~-~v~S~Ks~~GH~lgAaGa~e~i~~~  359 (415)
T PRK07103        306 DYVNPHGTGSVLGDATELDALRASGLA--------HA-RINTTKSLVGHGLSAAGIVELIATL  359 (415)
T ss_pred             CEEECCCCCCCCCCHHHHHHHHHHCCC--------CC-CEECCCHHHHHCHHHHHHHHHHHHH
T ss_conf             779814876767699999999997089--------98-6758644320357999999999999


No 79 
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.89  E-value=3.4e-07  Score=63.75  Aligned_cols=209  Identities=14%  Similarity=0.149  Sum_probs=121.1

Q ss_pred             HHHHHHHHHHHHHHHCCH---HHCC----EEEEECCCCCCC-----------------CH---------HHHHHHHHHHC
Q ss_conf             999999999999972795---7868----999945788754-----------------60---------05888863202
Q gi|254781019|r   51 IVTMAAAAALPIMQNQDK---NLID----TLFFATESSVDQ-----------------SK---------SAAIWLHKLLG   97 (396)
Q Consensus        51 ~~tmA~~Aa~~~L~~~~~---~~Id----~li~~T~t~~~~-----------------~~---------~~a~~v~~~Lg   97 (396)
                      ..-||+.|++.||++++.   +.++    -|+++|..+...                 .|         ..+..|...++
T Consensus         4 ~~~~a~~AA~eAl~dAGl~~~~~~~~~r~GV~~Gs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~   83 (336)
T PRK09116          4 VSLMATRASELALADAGLLGDPILTDGRMGVAYGSSTGSTDPIGAFGTMLLTGSMSGITATTYVRMMPHTTAVNVGLFFG   83 (336)
T ss_pred             HHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHC
T ss_conf             89999999999999659999866788888999995747689999999999718987648357765322299999999968


Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC--------------C---CCCCCC--------CC
Q ss_conf             6877358984142035888998789999739997699950332014--------------5---888753--------34
Q gi|254781019|r   98 LNSSCRVVELKQACYSATCALHMACALVAKSPERKVLIVASDVARY--------------D---LGSSGE--------PT  152 (396)
Q Consensus        98 l~~~~~~~Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~--------------~---~~~~~~--------~t  152 (396)
                      +...  .+-+..+|++++.||..|..+|++|....+|+-++|....              .   +....+        +.
T Consensus        84 l~Gp--s~tv~tACsSs~~Al~~A~~~I~~G~~d~~i~Gg~~~l~~~~~~~f~~l~~~s~~~~~p~~~~rPFD~~r~G~v  161 (336)
T PRK09116         84 LKGR--VIPTSSACTSGSQGIGYAYEAIKYGYQTLMLAGGAEELCPTEAAVFDTLFATSTKNDAPELTPRPFDANRDGLV  161 (336)
T ss_pred             CCCC--CCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEE
T ss_conf             9997--51635541689999999999997599888993500026880789999999983489999877787778999547


Q ss_pred             CCCCEEEEEECCC-------CCCCEEEECCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHH
Q ss_conf             7830246884268-------763035310001567865112758875423566016989999999999999996298821
Q gi|254781019|r  153 QGCGAVAILISSQ-------TSILEIEDITGIYTNDCMDFWRPNYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHDFN  225 (396)
Q Consensus       153 ~GaGA~Allv~~~-------~~~~~~~~~~~~~~~~~~df~rp~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~~  225 (396)
                      .|-||+++++++.       .++......++.. .|......|+                .+....+++..+++.|++++
T Consensus       162 ~gEGa~~lvLe~~~~A~~rga~i~a~i~G~~~~-~dg~~~t~P~----------------~~~~~~~~~~al~~ag~~~~  224 (336)
T PRK09116        162 IGEGAGTLVLEELEHAKARGATIYAEIVGFGTN-SDGAHVTQPQ----------------AETMQIAMELALKDAGLAPE  224 (336)
T ss_pred             ECCEEEEEEEEEHHHHHHCCCEEEEEEECEEEC-CCCCCCCCCC----------------HHHHHHHHHHHHHHCCCCCC
T ss_conf             704347999728899986799579998120660-4888898979----------------99999999999997098802


Q ss_pred             HCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
Q ss_conf             10123311454057888886411024544100134555433344453238543233899999
Q gi|254781019|r  226 DFQYFCYHQPFTRMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALI  287 (396)
Q Consensus       226 did~~v~H~p~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~  287 (396)
                      ||+|+..|-.+....+....+-.....        .+++ |....=..+|++..||=.+.+.
T Consensus       225 ~i~yI~aHgtgT~~gD~~E~~ai~~~f--------g~~~-pi~S~Ks~~GH~~gAaG~~e~i  277 (336)
T PRK09116        225 DIGYVNAHGTATDRGDIAESQATAAVF--------GARM-PISSLKSYFGHTLGACGALEAW  277 (336)
T ss_pred             CEEEEEECCCCCCCCCHHHHHHHHHHH--------CCCC-CCCCCCCCCCCCHHHHHHHHHH
T ss_conf             122899537778888999999999985--------7678-8877642104417779999999


No 80 
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=98.88  E-value=1.1e-06  Score=60.47  Aligned_cols=241  Identities=19%  Similarity=0.101  Sum_probs=143.3

Q ss_pred             HHHHHHHHHHHHHHC---CHHHCCEEEEECCCCCC-----CCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHH
Q ss_conf             999999999999727---95786899994578875-----4600588886320268773589841420358889987899
Q gi|254781019|r   52 VTMAAAAALPIMQNQ---DKNLIDTLFFATESSVD-----QSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACA  123 (396)
Q Consensus        52 ~tmA~~Aa~~~L~~~---~~~~Id~li~~T~t~~~-----~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~  123 (396)
                      .-|+..|.+++|+..   ++.++.+++...+-..-     ........+.+.+|+.......-+..+|.+++.||..|..
T Consensus        65 ~~la~~Al~eal~~~~~~~~~~~~l~l~l~e~~r~g~~~~~~~~~l~~l~~~~g~~~~~~s~~~~~G~as~~~al~~A~~  144 (346)
T PRK06147         65 AAMAAPALAEALEGLPALDASEAPLLLCVAEEERPGRPAGLEERLLRSLEEELGLRFEPGSAVIARGRVSGAVALLQARR  144 (346)
T ss_pred             HHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHH
T ss_conf             99999999999850786563236469983665577787510578999999872756676605652563049999999999


Q ss_pred             HHHCCCCCEEEEEECCCCCCC--------------CCCCCCCCCCCCEEEEEECCCCC----CCEEEECCCCCCCCCCCC
Q ss_conf             997399976999503320145--------------88875334783024688426876----303531000156786511
Q gi|254781019|r  124 LVAKSPERKVLIVASDVARYD--------------LGSSGEPTQGCGAVAILISSQTS----ILEIEDITGIYTNDCMDF  185 (396)
Q Consensus       124 ~i~sg~~~~aLVV~sD~~~~~--------------~~~~~~~t~GaGA~Allv~~~~~----~~~~~~~~~~~~~~~~df  185 (396)
                      .|+.|+...+||.+.|.....              .++++=+.-|-||++++++....    ...+.. .+...  ..+.
T Consensus       145 ~l~~g~~~~~lv~GvDS~~~~~~l~~~~~~~rL~~~~~~~GfvpGEgAa~llL~~~~~a~~rga~i~g-~g~g~--e~a~  221 (346)
T PRK06147        145 LIAAGGCPRVLVAGVDSLLTGPTLAHYEARERLLSSQNSNGFIPGEAAAAVLLGRPAAARAPQLPCLG-LGLGR--EPAT  221 (346)
T ss_pred             HHHCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHEEEEECCCCHHHCCCCCEEE-EEEEC--CCCC
T ss_conf             98659998799998723478789999986054268999889585202047885261100147982345-66203--6653


Q ss_pred             CCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCCHHHHHHH----HHHCCHHHHHHHHHHHH
Q ss_conf             27588754235660169899999999999999962988211012331145405788888----64110245441001345
Q gi|254781019|r  186 WRPNYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHDFNDFQYFCYHQPFTRMAEKAH----IRLSKIVHQNLSVAEIE  261 (396)
Q Consensus       186 ~rp~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~~did~~v~H~p~~k~~~~~~----~~l~~~~~~~~~~~~~e  261 (396)
                      ++..  +.|. +|        +.+.++++..++..+++.++++|++-|..+-..-.+-+    .|+.......       
T Consensus       222 ~~~~--~~p~-~g--------~Gl~~A~~~Al~~ag~~~~~v~~~~ad~nGe~~r~~e~~~a~~R~~~~~~~~-------  283 (346)
T PRK06147        222 VESE--DLPL-RG--------DGLTQAFRAALAEAGIGLEDVGYRLADLNGEQYRFKEAALAESRLFRVPHEF-------  283 (346)
T ss_pred             CCCC--CCCC-CC--------HHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCC-------
T ss_conf             3477--8998-65--------7999999999986279856777799689988442137999999752025666-------


Q ss_pred             HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH-CCCCCCCCEEEEEEECC-C-CCEEEE
Q ss_conf             5543334445323854323389999999971-57436988899984079-8-303778
Q gi|254781019|r  262 KAIGITTLYNRLIGNSYTASLYIALISLLDH-SSENLAGKRVGFFSYGS-G-CVAEFF  316 (396)
Q Consensus       262 ~~~~~~~~~~~~~GN~~SASi~l~L~slLe~-~~~~~~G~rIll~syGs-G-~~a~~f  316 (396)
                        ...+ .-...+|+++.|+-++.+.-.+.- .+...+|.++++++=.- | +.+.+.
T Consensus       284 --~~~~-~pa~~~G~~GAA~G~~~~a~a~~a~~~g~~pg~~~l~~~s~d~g~r~A~~l  338 (346)
T PRK06147        284 --PDLW-HPAECLGECGAALGPALLGVALAASRKGYGPGPPVLCHASDDDGARGAAVL  338 (346)
T ss_pred             --CCCC-CHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEEEE
T ss_conf             --6656-877751647889999999999999982868998679995478875269998


No 81 
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=98.88  E-value=2.6e-07  Score=64.48  Aligned_cols=216  Identities=17%  Similarity=0.118  Sum_probs=122.8

Q ss_pred             HHHHHHHHHHHHHCCH---HHCC----EEEEECCCCCCC-----------------C-------HHHHHHHHHHHCCCCC
Q ss_conf             9999999999972795---7868----999945788754-----------------6-------0058888632026877
Q gi|254781019|r   53 TMAAAAALPIMQNQDK---NLID----TLFFATESSVDQ-----------------S-------KSAAIWLHKLLGLNSS  101 (396)
Q Consensus        53 tmA~~Aa~~~L~~~~~---~~Id----~li~~T~t~~~~-----------------~-------~~~a~~v~~~Lgl~~~  101 (396)
                      -|++.|++++|++++.   +.++    .++++|.++...                 .       ...+..+...+++. .
T Consensus        74 ~~~l~aa~~Al~dAGl~~~~~~~~~r~gv~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~~~~-~  152 (407)
T cd00828          74 LLALVATEEALADAGITDPYEVHPSEVGVVVGSGMGGLRFLRRGGKLDARAVNPYVSPKWMLSPNTVAGWVNILLLSS-H  152 (407)
T ss_pred             HHHHHHHHHHHHHCCCCCHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHCCC-C
T ss_conf             999999999999679996455278766999996774388899887765540587325023014224889999985878-8


Q ss_pred             CEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC--------------CCCCC---CC--------CCCCCC
Q ss_conf             358984142035888998789999739997699950332014--------------58887---53--------347830
Q gi|254781019|r  102 CRVVELKQACYSATCALHMACALVAKSPERKVLIVASDVARY--------------DLGSS---GE--------PTQGCG  156 (396)
Q Consensus       102 ~~~~Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~--------------~~~~~---~~--------~t~GaG  156 (396)
                      -+.+-+..+|++++.||..|..+|++|....+||.++|....              ..+.+   .+        +.-|.|
T Consensus       153 Gp~~tv~tACaSsl~Ai~~A~~~I~~G~~d~aivGg~~~~~~~~~~~f~~~~~ls~~~~~p~~~~rPFD~~rdG~v~gEG  232 (407)
T cd00828         153 GPIKTPVGACATALEALDLAVEAIRSGKADIVVVGGVEDPLEEGLSGFANMGALSTAEEEPEEMSRPFDETRDGFVEAEG  232 (407)
T ss_pred             CCCCCEECHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCEEECCC
T ss_conf             98526503507999999999666236851446643122356366799987445422789988751303667898683485


Q ss_pred             EEEEEECCCC-------CCCEEEECCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCE
Q ss_conf             2468842687-------630353100015678651127588754235660169899999999999999962988211012
Q gi|254781019|r  157 AVAILISSQT-------SILEIEDITGIYTNDCMDFWRPNYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHDFNDFQY  229 (396)
Q Consensus       157 A~Allv~~~~-------~~~~~~~~~~~~~~~~~df~rp~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~~did~  229 (396)
                      |+++++++..       .+......++... +...   . ....   .        ......++++.+++.+++++||+|
T Consensus       233 a~~lvLe~~~~A~~rg~~i~a~i~g~~~~~-dg~~---~-~~~~---~--------~~~~~~~~~~Al~~A~i~~~~i~y  296 (407)
T cd00828         233 AGVLVLERAELALARGAPIYGRVAGTASTT-DGAG---R-SVPA---G--------GKGIARAIRTALAKAGLSLDDLDV  296 (407)
T ss_pred             CEEEEEEEHHHHHHCCCEEEEEECCEEEEC-CCCC---C-CCCC---C--------CHHHHHHHHHHHHHCCCCCCCCCE
T ss_conf             217765048667668897999643647866-8988---8-7798---6--------267899999999971999545638


Q ss_pred             EEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
Q ss_conf             33114540578888864110245441001345554333444532385432338999999997
Q gi|254781019|r  230 FCYHQPFTRMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALISLLD  291 (396)
Q Consensus       230 ~v~H~p~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~slLe  291 (396)
                      +-.|-.+.++.+....+-......+..     +.+ +....=..+|++-.||=.+.|...+.
T Consensus       297 I~aHgtgT~~gD~~E~~Al~~~f~~~~-----~~~-~i~S~K~~~GH~~~aaG~~~li~~~l  352 (407)
T cd00828         297 ISAHGTSTPANDVAESRAIAEVAGALG-----APL-PVTAQKALFGHSKGAAGALQLIGALQ  352 (407)
T ss_pred             EEEECCCCCCCCHHHHHHHHHHHHCCC-----CCC-EEECCCCCCCCCHHHHHHHHHHHHHH
T ss_conf             995167686669999999999862137-----887-04450123031678999999999999


No 82 
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.87  E-value=2.6e-07  Score=64.45  Aligned_cols=261  Identities=13%  Similarity=0.129  Sum_probs=142.6

Q ss_pred             CEEEEEEEECCCEEECHHHHHHHC--CCC----HHHHHHHCCCCEEEEC-CCCCC---------------HHHHHHHHHH
Q ss_conf             206688873489045599999870--999----8797630383246655-99859---------------9999999999
Q gi|254781019|r    3 IGIEDISFYTTNQYLDLSVIAEKY--RLD----VAKFYVGIGQERMSVL-NPDED---------------IVTMAAAAAL   60 (396)
Q Consensus         3 vGI~~i~~y~P~~~v~~~~l~~~~--g~~----~~k~~~~lGi~~r~v~-~~~Ed---------------~~tmA~~Aa~   60 (396)
                      |-|++||.-.|.- .+.+++-+..  |.+    ..++.. .+...+... -++-|               ..-|++.|+.
T Consensus         6 VaItG~g~~~p~g-~~~e~~w~~L~~G~s~i~~~~~~~~-~~~~~~~~g~i~~fd~~~~~~~~~~~~~d~~~~~~l~aa~   83 (414)
T PRK08722          6 VVVTGMGMLSPVG-NTVESSWKALLAGQSGIVNIEHFDT-TNFSTRFAGLVKDFNCEEYMSKKDARKMDLFIQYGIAAGI   83 (414)
T ss_pred             EEEECCEEECCCC-CCHHHHHHHHHCCCCCEEECCCCCC-CCCCCCEEEECCCCCHHHCCCHHHHHHCCHHHHHHHHHHH
T ss_conf             9998768689795-9999999999739983663784565-5798866577288894675899999866999999999999


Q ss_pred             HHHHHCCH--H-----HCCEEEEECCCCC----------------CC-----C-----HHHHHHHHHHHCCCCCCEEEEE
Q ss_conf             99972795--7-----8689999457887----------------54-----6-----0058888632026877358984
Q gi|254781019|r   61 PIMQNQDK--N-----LIDTLFFATESSV----------------DQ-----S-----KSAAIWLHKLLGLNSSCRVVEL  107 (396)
Q Consensus        61 ~~L~~~~~--~-----~Id~li~~T~t~~----------------~~-----~-----~~~a~~v~~~Lgl~~~~~~~Di  107 (396)
                      ++|++++.  .     .++ ++++|..+.                ..     .     -..+..+...+|+...  ++-+
T Consensus        84 ~Al~dAGl~~~~~~~~r~G-v~vG~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~gl~Gp--~~tv  160 (414)
T PRK08722         84 QALDDSGLEVTEENAHRIG-VAIGSGIGGLGLIEAGHKALVEKGPRKISPFFVPSTIVNMIAGHMSIMRGLRGP--NIAI  160 (414)
T ss_pred             HHHHHHCCCCCCCCCCCEE-EEEEECCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC--CCCC
T ss_conf             9999628994324656447-999405671777999999998548654584222245778999999998399898--7253


Q ss_pred             CCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC-----------C----CCC---CC--------CCCCCCEEEEE
Q ss_conf             1420358889987899997399976999503320145-----------8----887---53--------34783024688
Q gi|254781019|r  108 KQACYSATCALHMACALVAKSPERKVLIVASDVARYD-----------L----GSS---GE--------PTQGCGAVAIL  161 (396)
Q Consensus       108 ~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~-----------~----~~~---~~--------~t~GaGA~All  161 (396)
                      ..+|++++.||..|..+|++|....+||.++|.....           +    +.+   .+        +..|-||++++
T Consensus       161 ~tACsS~l~Ai~~A~~~I~~G~~d~aivGG~~~~~~p~~~~~f~~~~~ls~~~~~p~~~~rPFD~~rdG~v~gEGa~~~v  240 (414)
T PRK08722        161 STACTTGLHNIGHAARMIAYGDADAMLAGGAEKASTPLGMGGFGAAKALSTRNDEPQKASRPWDKDRDGFVLGDGAGMMV  240 (414)
T ss_pred             CCHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCEEEE
T ss_conf             55407899999999999867985744327732203828899988653120258996546566557999835306421898


Q ss_pred             ECCC-------CCCCEEEECCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECC
Q ss_conf             4268-------763035310001567865112758875423566016989999999999999996298821101233114
Q gi|254781019|r  162 ISSQ-------TSILEIEDITGIYTNDCMDFWRPNYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHDFNDFQYFCYHQ  234 (396)
Q Consensus       162 v~~~-------~~~~~~~~~~~~~~~~~~df~rp~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~~did~~v~H~  234 (396)
                      +++.       .++......++. ..|......|.      -+|        .....+++..+++.|++++||||+..|-
T Consensus       241 Le~~~~A~~rGa~i~a~i~G~g~-~~d~~~~~~p~------p~g--------~~~~~~m~~al~~agi~~~~I~yI~aHG  305 (414)
T PRK08722        241 LEEYEHAKARGAKIYAELVGFGM-SGDAYHMTSPS------EDG--------SGGALAMEAAMRDAGITGEQIGYVNAHG  305 (414)
T ss_pred             EEEHHHHHHCCCCCEEEEEEEEE-CCCCCCCCCCC------CCH--------HHHHHHHHHHHHHCCCCHHHCCEEEEEC
T ss_conf             70088898679974399987875-36888886679------757--------9999999999987499987886698635


Q ss_pred             CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
Q ss_conf             540578888864110245441001345554333444532385432338999999
Q gi|254781019|r  235 PFTRMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALIS  288 (396)
Q Consensus       235 p~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~s  288 (396)
                      .+..+.+....+-....-.+...    +.+ +....=..+|++.+||=.+.|..
T Consensus       306 TgT~~gD~~E~~ai~~~fg~~~~----~~~-~v~S~Ks~iGH~~~AaG~~~~i~  354 (414)
T PRK08722        306 TSTPAGDVAEIKGIKRALGEAGS----KQV-LVSSTKSMTGHLLGAAGSVEAII  354 (414)
T ss_pred             CCCCCCCHHHHHHHHHHHCCCCC----CCC-CCCCCCCCCCCCHHHHHHHHHHH
T ss_conf             87877599999999999663578----975-21470033022378889999999


No 83 
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=98.86  E-value=6.1e-07  Score=62.17  Aligned_cols=143  Identities=19%  Similarity=0.185  Sum_probs=91.1

Q ss_pred             HHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC----C-------CCCCC-----
Q ss_conf             0588886320268773589841420358889987899997399976999503320145----8-------88753-----
Q gi|254781019|r   87 SAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACALVAKSPERKVLIVASDVARYD----L-------GSSGE-----  150 (396)
Q Consensus        87 ~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~----~-------~~~~~-----  150 (396)
                      +.+..|...+|+..  +++-+..||.++..||..|..+|++|....+||.++|.....    +       ....+     
T Consensus       138 ~~a~~Ia~~~gl~G--p~~t~~~ACaSg~~Ai~~A~~~I~~G~~d~~i~Gg~d~l~~~~~~~f~~~~~ls~~~~rPFd~~  215 (395)
T PRK09185        138 SPADFLRAYLGLSG--PAYTISTACSSSAKVFASARRLLEAGLCDAVIVGGVDSLCRLTLNGFNSLESLSPGPCQPFSAN  215 (395)
T ss_pred             HHHHHHHHHHCCCC--CCEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCC
T ss_conf             49999999968989--6320014460899999999999985998889980212245520578776422466788765579


Q ss_pred             ---CCCCCCEEEEEECCCCCC--CEEEECCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHH
Q ss_conf             ---347830246884268763--035310001567865112758875423566016989999999999999996298821
Q gi|254781019|r  151 ---PTQGCGAVAILISSQTSI--LEIEDITGIYTNDCMDFWRPNYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHDFN  225 (396)
Q Consensus       151 ---~t~GaGA~Allv~~~~~~--~~~~~~~~~~~~~~~df~rp~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~~  225 (396)
                         +..|-||+++++++...-  ......++.. .|....-.|    .|  +|        +....++++.+++.+++++
T Consensus       216 r~G~v~gEGa~~~vLE~~~~a~~~~~~~G~~~~-~da~~~~~p----~p--~g--------~g~~~am~~Al~~a~~~~~  280 (395)
T PRK09185        216 RDGINIGEAAAFFLLRPATRDDAAVLLLGVGES-SDAHHMSAP----HP--EG--------LGARLAMQAALADAGLEAA  280 (395)
T ss_pred             CCCEEEECEEEEEEECHHHCCCCCEEEEEEEEC-CCCCCCCCC----CC--CH--------HHHHHHHHHHHHHCCCCCC
T ss_conf             997365056899997455629997899998851-677777788----98--88--------9999999999997399934


Q ss_pred             HCCEEEECCCCCHHHHHHHHH
Q ss_conf             101233114540578888864
Q gi|254781019|r  226 DFQYFCYHQPFTRMAEKAHIR  246 (396)
Q Consensus       226 did~~v~H~p~~k~~~~~~~~  246 (396)
                      ||||+..|-.+.+..+....+
T Consensus       281 di~yv~aHgtgT~~~D~~E~~  301 (395)
T PRK09185        281 DIGYINLHGTATPLNDAMESR  301 (395)
T ss_pred             CCCEEEEECCCCCCCCHHHHH
T ss_conf             366699616768665899999


No 84 
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.85  E-value=4.1e-07  Score=63.25  Aligned_cols=210  Identities=15%  Similarity=0.061  Sum_probs=119.2

Q ss_pred             HHHHHHHHHHHHHCC-----HHHCCEEEEECCCCCC----------------C-C---------HHHHHHHHHHHCCCCC
Q ss_conf             999999999997279-----5786899994578875----------------4-6---------0058888632026877
Q gi|254781019|r   53 TMAAAAALPIMQNQD-----KNLIDTLFFATESSVD----------------Q-S---------KSAAIWLHKLLGLNSS  101 (396)
Q Consensus        53 tmA~~Aa~~~L~~~~-----~~~Id~li~~T~t~~~----------------~-~---------~~~a~~v~~~Lgl~~~  101 (396)
                      .++..+++.++++++     ++.++. +++|..+..                . .         ...+..+...+++.. 
T Consensus        85 ~~~~~~~~~a~edaG~~~~~~~r~gv-~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~~~~G-  162 (418)
T PRK07910         85 RMSTVLGRRVWENAGSPEVDTNRLMV-SIGTGLGSAEELVFSYDDMRARGLRAVSPLAVQMYMPNGPAAAVGLERHAKA-  162 (418)
T ss_pred             HHHHHHHHHHHHHCCCCCCCHHHCEE-EEEEECCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC-
T ss_conf             99999999999977999888225017-9887315558899999999854856558778999866379999999828978-


Q ss_pred             CEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC-----------C-----CCC---CC--------CCCC
Q ss_conf             3589841420358889987899997399976999503320145-----------8-----887---53--------3478
Q gi|254781019|r  102 CRVVELKQACYSATCALHMACALVAKSPERKVLIVASDVARYD-----------L-----GSS---GE--------PTQG  154 (396)
Q Consensus       102 ~~~~Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~-----------~-----~~~---~~--------~t~G  154 (396)
                       +++-+..||++++.||..|..+|++|....+|+-++|.....           .     +++   .+        +..|
T Consensus       163 -p~~t~~tACsSs~~Ai~~A~~~I~~G~~d~ai~GG~~~~l~~~~~~~f~~l~~~~s~~~~~p~~~~rPFD~~rdG~v~g  241 (418)
T PRK07910        163 -GVITPVSACASGSEAIAQAWRQIVLGEADIAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFDKDRDGFVFG  241 (418)
T ss_pred             -CCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEC
T ss_conf             -8555305323488999999999980998889954522126817789999977774458899887768655678986404


Q ss_pred             CCEEEEEECCCC-------CCCEEEECCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHC
Q ss_conf             302468842687-------6303531000156786511275887542356601698999999999999999629882110
Q gi|254781019|r  155 CGAVAILISSQT-------SILEIEDITGIYTNDCMDFWRPNYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHDFNDF  227 (396)
Q Consensus       155 aGA~Allv~~~~-------~~~~~~~~~~~~~~~~~df~rp~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~~di  227 (396)
                      -||+++++.+..       .+......++.. .|...+..|..      +|        +...+++++.+++.|++++||
T Consensus       242 EGag~lvLe~l~~A~~rGa~I~a~i~G~g~~-~Dg~~~~~p~p------~g--------~~~~~am~~Al~~agl~p~~I  306 (418)
T PRK07910        242 EGGALMVIETEEHAKARGANILARIMGASIT-SDGYHMVAPDP------NG--------ERAGHAMTRAIQLAGLTPTDI  306 (418)
T ss_pred             CCEEEEEEECHHHHHHCCCEEEEEEEEEEEC-CCCCCCCCCCC------CC--------HHHHHHHHHHHHHHCCCCCCC
T ss_conf             8248888502545663698578998513645-88888757899------80--------789999999999828995340


Q ss_pred             CEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
Q ss_conf             1233114540578888864110245441001345554333444532385432338999999
Q gi|254781019|r  228 QYFCYHQPFTRMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALIS  288 (396)
Q Consensus       228 d~~v~H~p~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~s  288 (396)
                      ||+..|-.+.+..+....+-....-..        ...+....=..+|++-+||=-+.+..
T Consensus       307 dyI~aHGTgT~~gD~~E~~Ai~~vfg~--------~~~~v~S~Ks~iGH~~~AaG~~e~i~  359 (418)
T PRK07910        307 DHVNAHATGTSVGDVAEGRAINNALGG--------HRPAVYAPKSALGHSVGAVGAVESIL  359 (418)
T ss_pred             CEEEECCCCCCCCCHHHHHHHHHHHCC--------CCCCEECCHHHHHCCHHHHHHHHHHH
T ss_conf             779956777876699999999998669--------99841281243420389999999999


No 85 
>PRK08768 consensus
Probab=98.85  E-value=6e-07  Score=62.22  Aligned_cols=266  Identities=12%  Similarity=0.130  Sum_probs=142.8

Q ss_pred             CC--CEEEEEEEECCCEEECHHHHHHHC--CC---------CHHHHHHHCC--C---CEEEECCCCC----C-HHHHHHH
Q ss_conf             96--206688873489045599999870--99---------9879763038--3---2466559985----9-9999999
Q gi|254781019|r    1 MA--IGIEDISFYTTNQYLDLSVIAEKY--RL---------DVAKFYVGIG--Q---ERMSVLNPDE----D-IVTMAAA   57 (396)
Q Consensus         1 M~--vGI~~i~~y~P~~~v~~~~l~~~~--g~---------~~~k~~~~lG--i---~~r~v~~~~E----d-~~tmA~~   57 (396)
                      |+  |-|++||.-.|-- .+.+++-+..  |.         +...+...++  +   ....+..+.|    | ..-+++.
T Consensus         1 M~rrVvITGmG~vtp~G-~~~~~~w~~L~~G~s~i~~~~~~d~~~~~~~~~g~i~~fd~~~~~~~~~~~~~d~~~~~~l~   79 (411)
T PRK08768          1 MSRRVVVTGMGMVSPLG-NDLATSWDGIVHGRSGIGPITQIDASQFTTKIAGEIKNFDPTLFVSAKDVKKMDSFIHYGVG   79 (411)
T ss_pred             CCCCEEEECCEEECCCC-CCHHHHHHHHHCCCCCEECCCCCCCCCCCCCEEEECCCCCHHHCCCHHHHHHCCHHHHHHHH
T ss_conf             98989998767789796-99999999998089855407756631487776554588792554899999756999999999


Q ss_pred             HHHHHHHHCC--HHHCC----EEEEECCCCCCCC--------------------------HHHHHHHHHHHCCCCCCEEE
Q ss_conf             9999997279--57868----9999457887546--------------------------00588886320268773589
Q gi|254781019|r   58 AALPIMQNQD--KNLID----TLFFATESSVDQS--------------------------KSAAIWLHKLLGLNSSCRVV  105 (396)
Q Consensus        58 Aa~~~L~~~~--~~~Id----~li~~T~t~~~~~--------------------------~~~a~~v~~~Lgl~~~~~~~  105 (396)
                      |+.++|++++  +++++    -++++|.++....                          -..+..|...+++..  +++
T Consensus        80 aa~~Al~dAGl~~~~~~~~r~Gv~vGt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~g~~G--p~~  157 (411)
T PRK08768         80 ASFMALDDSGLEINESNAERVGAILGSGIGGLLGIEEQTIKFHEGGARKISPFYVPSTIINMLPGQVSLIKGLKG--PTF  157 (411)
T ss_pred             HHHHHHHHHCCCHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC--CCC
T ss_conf             999997741899001476552799922666530278999999856855468225566676689999999819989--762


Q ss_pred             EECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC-----------C----CCC---CC--------CCCCCCEEE
Q ss_conf             841420358889987899997399976999503320145-----------8----887---53--------347830246
Q gi|254781019|r  106 ELKQACYSATCALHMACALVAKSPERKVLIVASDVARYD-----------L----GSS---GE--------PTQGCGAVA  159 (396)
Q Consensus       106 Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~-----------~----~~~---~~--------~t~GaGA~A  159 (396)
                      -+..+|++++.||..|..+|++|....+|+.++|.....           +    +++   .+        +..|-||++
T Consensus       158 tv~taCaS~l~Al~~A~~~i~~G~~d~~ivgg~~~~~~p~~~~~f~~l~~ls~~~~~P~~~~rPFd~~rdG~v~gEGa~~  237 (411)
T PRK08768        158 SAVSACATSNHSIGTAMRMIQHGDADVMLAGGAERGSSPSSVGGFCAMKAMSTRNDDPTGASRPWDKQRDGFVLGDGAGV  237 (411)
T ss_pred             CCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCEEEE
T ss_conf             53541137889999999998678867455264202158788999998654520378988766666579998686680489


Q ss_pred             EEECCC-------CCCCEEEECCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEE
Q ss_conf             884268-------7630353100015678651127588754235660169899999999999999962988211012331
Q gi|254781019|r  160 ILISSQ-------TSILEIEDITGIYTNDCMDFWRPNYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHDFNDFQYFCY  232 (396)
Q Consensus       160 llv~~~-------~~~~~~~~~~~~~~~~~~df~rp~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~~did~~v~  232 (396)
                      +++.+.       ..+......++... |......|.      -++        .....+++..+++.+++++||||+..
T Consensus       238 ~vLe~~e~A~~rga~i~a~i~g~~~~~-d~~~~~~p~------~~~--------~~~~~~~~~al~~a~~~~~~i~yi~a  302 (411)
T PRK08768        238 LVLEEYEHAKARGARIYAELVGFGASS-DAFHMTAPS------EDG--------EGAARSMAAAMRDAKLNPEQIGYLNA  302 (411)
T ss_pred             EEECCHHHHHHCCCCEEEEEEEEEECC-CCCCCCCCC------CCH--------HHHHHHHHHHHHHCCCCCCCEEEEEE
T ss_conf             997148889867990789997787614-788887889------777--------99999999999976989310248996


Q ss_pred             CCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
Q ss_conf             1454057888886411024544100134555433344453238543233899999999
Q gi|254781019|r  233 HQPFTRMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALISLL  290 (396)
Q Consensus       233 H~p~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~slL  290 (396)
                      |-...++.+....+-....-.+..   .+  + +....=..+|++..||=.+.|...+
T Consensus       303 HgtgT~~~D~~E~~ai~~~fg~~~---~~--~-~i~s~Ks~~GH~~~aaG~~~~~~~~  354 (411)
T PRK08768        303 HGTSTPLGDLAETMAMKRALGDHA---YK--T-MVSSTKSMTGHLLGAAGGVEAIFSV  354 (411)
T ss_pred             ECCCCCCCCHHHHHHHHHHHCCCC---CC--C-EEECHHHHHHHHHHHHHHHHHHHHH
T ss_conf             756675539999999999856789---98--7-4789445543208999999999999


No 86 
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=98.83  E-value=5.5e-06  Score=56.21  Aligned_cols=99  Identities=16%  Similarity=0.107  Sum_probs=80.4

Q ss_pred             CCCCHHHHHHHHHHHHHHHC---CHHHCCEEEEECCCCCC-CCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHH
Q ss_conf             98599999999999999727---95786899994578875-460058888632026877358984142035888998789
Q gi|254781019|r   47 PDEDIVTMAAAAALPIMQNQ---DKNLIDTLFFATESSVD-QSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMAC  122 (396)
Q Consensus        47 ~~Ed~~tmA~~Aa~~~L~~~---~~~~Id~li~~T~t~~~-~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~  122 (396)
                      .+..+.+|++.+++.+|++.   +|++||-++++...+.- ...-.+-+..=.-|++.+++++-++..|.+++.|+.+|.
T Consensus        27 ~~~~~~~L~a~~i~~~l~r~~~l~~~~Id~vi~G~~~~~~~~g~n~aR~aal~aGlp~~vp~~tVnr~C~SGl~Ai~~Aa  106 (399)
T PRK09052         27 KNTRPDDLLAHVLRAAVAQVPGLDPKLIEDAIVGCAMPEAEQGLNVARIGALLAGLPNSVGGVTVNRFCASGLQAVAMAA  106 (399)
T ss_pred             CCCCHHHHHHHHHHHHHHHCCCCCHHHCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHHH
T ss_conf             88998999999999999865797989989799970644565566899999997599988871578651336899999999


Q ss_pred             HHHHCCCCCEEEEEECCCCCCCC
Q ss_conf             99973999769995033201458
Q gi|254781019|r  123 ALVAKSPERKVLIVASDVARYDL  145 (396)
Q Consensus       123 ~~i~sg~~~~aLVV~sD~~~~~~  145 (396)
                      ..|++|....+|+.+.|.++..+
T Consensus       107 ~~I~~G~~dvviaGG~EsMS~~P  129 (399)
T PRK09052        107 DRIRVGEADVMIAAGVESMSMVP  129 (399)
T ss_pred             HHHHCCCCCEEEECCCCCCCCCC
T ss_conf             99868998889861520246686


No 87 
>PRK06845 consensus
Probab=98.83  E-value=7.6e-08  Score=67.76  Aligned_cols=98  Identities=16%  Similarity=0.139  Sum_probs=83.2

Q ss_pred             CCCCHHHHHHHHHHHHHHHC--CHHHCCEEEEECCCCCCC-CHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHH
Q ss_conf             98599999999999999727--957868999945788754-600588886320268773589841420358889987899
Q gi|254781019|r   47 PDEDIVTMAAAAALPIMQNQ--DKNLIDTLFFATESSVDQ-SKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACA  123 (396)
Q Consensus        47 ~~Ed~~tmA~~Aa~~~L~~~--~~~~Id~li~~T~t~~~~-~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~  123 (396)
                      .+..+.+|++.|++.+|++.  +|++||-++++...+... ....+-.+.-..|++..++++.++.+|.++..|+.+|..
T Consensus        22 ~~~~~~~L~~~a~~~al~~~gi~~~~Id~vi~G~~~~~g~~~~~~aR~~aL~aGlp~~vp~~tV~~~CaSG~~Ai~~A~~  101 (392)
T PRK06845         22 KDLSATDLGVAAAKAALEQAGVSPEDIGHVVFGNVIQTGKDAIYLARHIGLKAGLPVGVPALTVNRLCGSGFEAIIQAAK  101 (392)
T ss_pred             CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHH
T ss_conf             88999999999999999871979899798999815645654334999999976999888748884430388999999999


Q ss_pred             HHHCCCCCEEEEEECCCCCCC
Q ss_conf             997399976999503320145
Q gi|254781019|r  124 LVAKSPERKVLIVASDVARYD  144 (396)
Q Consensus       124 ~i~sg~~~~aLVV~sD~~~~~  144 (396)
                      .|++|....+|+++.|.++..
T Consensus       102 ~I~sG~~dvvlagGvEsmS~~  122 (392)
T PRK06845        102 LIYLGEAEAVLAGGVESMSQA  122 (392)
T ss_pred             HHHCCCCCEEEECCEECCCCC
T ss_conf             985799767886255205554


No 88 
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=98.82  E-value=9.2e-07  Score=61.05  Aligned_cols=211  Identities=12%  Similarity=0.016  Sum_probs=118.4

Q ss_pred             HHHHHHHHHHHHHHHCC--HHHCC----EEEEECCCCCCCC----------------H----------HHHHHHHHHHCC
Q ss_conf             99999999999997279--57868----9999457887546----------------0----------058888632026
Q gi|254781019|r   51 IVTMAAAAALPIMQNQD--KNLID----TLFFATESSVDQS----------------K----------SAAIWLHKLLGL   98 (396)
Q Consensus        51 ~~tmA~~Aa~~~L~~~~--~~~Id----~li~~T~t~~~~~----------------~----------~~a~~v~~~Lgl   98 (396)
                      ..-|++.|++++|++++  +++++    .++++|.++....                .          ..+..+...+++
T Consensus        71 ~~~~~l~aa~~Al~dAGl~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~is~~~gl  150 (399)
T cd00832          71 MTRLALAAADWALADAGVDPAALPPYDMGVVTASAAGGFEFGQRELQKLWSKGPRHVSAYQSFAWFYAVNTGQISIRHGM  150 (399)
T ss_pred             HHHHHHHHHHHHHHHCCCCHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             99999999999888609984564877428999425676025589999997418542561121356677888899998289


Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC--------------CCCCC---C--------CCC
Q ss_conf             8773589841420358889987899997399976999503320145--------------88875---3--------347
Q gi|254781019|r   99 NSSCRVVELKQACYSATCALHMACALVAKSPERKVLIVASDVARYD--------------LGSSG---E--------PTQ  153 (396)
Q Consensus        99 ~~~~~~~Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~--------------~~~~~---~--------~t~  153 (396)
                      ...  ++-+..+|++++.|+..|..+|++| ...+++.++|.....              .+.+.   +        +..
T Consensus       151 ~Gp--~~tv~tacsssl~Ai~~A~~~i~~G-~d~~i~Gg~~~~l~p~~~~~~~~~g~ls~~~~p~~~~rPFD~~r~G~v~  227 (399)
T cd00832         151 RGP--SGVVVAEQAGGLDALAQARRLVRRG-TPLVVSGGVDSALCPWGWVAQLSSGRLSTSDDPARAYLPFDAAAAGYVP  227 (399)
T ss_pred             CCC--CCCHHCCCCHHHHHHHHHHHHHHCC-CCHHHCCCCCEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEE
T ss_conf             887--4102114707999999999998769-7201217740451628899998756645699998650477678980664


Q ss_pred             CCCEEEEEECCC-------CCCCEEEECCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHH
Q ss_conf             830246884268-------7630353100015678651127588754235660169899999999999999962988211
Q gi|254781019|r  154 GCGAVAILISSQ-------TSILEIEDITGIYTNDCMDFWRPNYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHDFND  226 (396)
Q Consensus       154 GaGA~Allv~~~-------~~~~~~~~~~~~~~~~~~df~rp~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~~d  226 (396)
                      |-||+++++++.       +.+......++...    |-..+    .+  .        -+.+.+++++.+++.|++++|
T Consensus       228 GEGa~~lvLe~~~~A~~rGa~i~a~i~G~~~~~----d~~~~----~~--~--------~~~~~~a~~~Al~~agi~p~~  289 (399)
T cd00832         228 GEGGAILVLEDAAAARERGARVYGEIAGYAATF----DPPPG----SG--R--------PPGLARAIRLALADAGLTPED  289 (399)
T ss_pred             CCCEEEEEECCHHHHHHCCCEEEEEEEEEEECC----CCCCC----CC--C--------HHHHHHHHHHHHHHHCCCCCE
T ss_conf             276678884549889878895999998889848----99899----98--9--------799999999999971999670


Q ss_pred             CCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
Q ss_conf             0123311454057888886411024544100134555433344453238543233899999999
Q gi|254781019|r  227 FQYFCYHQPFTRMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALISLL  290 (396)
Q Consensus       227 id~~v~H~p~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~slL  290 (396)
                      |||+..|-.+..+.+....+-....-..       ..+ +....=..+|++..||=.+.|...+
T Consensus       290 I~yI~aHgTGT~~gD~~E~~Ai~~~fg~-------~~~-pv~S~K~~iGH~~~AaG~~~~i~~l  345 (399)
T cd00832         290 VDVVFADAAGVPELDRAEAAALAAVFGP-------RGV-PVTAPKTMTGRLYAGGAPLDVATAL  345 (399)
T ss_pred             EEEEEEECCCCCCCCHHHHHHHHHHHCC-------CCC-CCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf             5699983375855699999999999669-------998-7899542211069999999999999


No 89 
>PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=98.79  E-value=3.3e-06  Score=57.57  Aligned_cols=255  Identities=12%  Similarity=0.105  Sum_probs=134.9

Q ss_pred             CC-CEEEEEEEECCCEEECHHHHHHHC--CCC---H-HHHHHHCCCCEEEECCCC---------------CCHHHHHHHH
Q ss_conf             96-206688873489045599999870--999---8-797630383246655998---------------5999999999
Q gi|254781019|r    1 MA-IGIEDISFYTTNQYLDLSVIAEKY--RLD---V-AKFYVGIGQERMSVLNPD---------------EDIVTMAAAA   58 (396)
Q Consensus         1 M~-vGI~~i~~y~P~~~v~~~~l~~~~--g~~---~-~k~~~~lGi~~r~v~~~~---------------Ed~~tmA~~A   58 (396)
                      |+ |-|++||.-.|-- .+.+++-+..  |.+   . ..+. ..+...+....++               .+...+++.|
T Consensus         1 mrrVvITG~G~vsp~G-~~~~e~w~~L~~G~sgi~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~r~~~~~~~~a~~A   78 (406)
T PRK07967          1 MRRVVITGLGIVSSIG-NNQQEVLASLREGRSGITFSQEFA-ELGMRSQVWGNVKLDPEELIDRKVMRFMGDAAAYAYLA   78 (406)
T ss_pred             CCEEEEECCEEECCCC-CCHHHHHHHHHCCCCCEEECCCCC-CCCCCCCEEEECCCCHHHCCCHHHHHCCCHHHHHHHHH
T ss_conf             9719998543789882-999999999981999766688544-45997616775688936608988870279999999999


Q ss_pred             HHHHHHHCC--HHHCC----EEEEECCCCCC-----------------CC-H---------HHHHHHHHHHCCCCCCEEE
Q ss_conf             999997279--57868----99994578875-----------------46-0---------0588886320268773589
Q gi|254781019|r   59 ALPIMQNQD--KNLID----TLFFATESSVD-----------------QS-K---------SAAIWLHKLLGLNSSCRVV  105 (396)
Q Consensus        59 a~~~L~~~~--~~~Id----~li~~T~t~~~-----------------~~-~---------~~a~~v~~~Lgl~~~~~~~  105 (396)
                      +++||++++  +++++    .|+++|..+..                 .. |         ..+..+...+++..  +++
T Consensus        79 a~eAl~dAGl~~~~~~~~r~Gv~~Gs~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~a~~is~~~~l~G--p~~  156 (406)
T PRK07967         79 MEQAIADAGLSEDQVSNPRTGLIAGSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTVSACLATPFKIKG--VNY  156 (406)
T ss_pred             HHHHHHHCCCCHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC--CCC
T ss_conf             999999759982455856548999278731888999999987418976228348998866689999999848999--753


Q ss_pred             EECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC------------------CCCCCC--------CCCCCCEEE
Q ss_conf             841420358889987899997399976999503320145------------------888753--------347830246
Q gi|254781019|r  106 ELKQACYSATCALHMACALVAKSPERKVLIVASDVARYD------------------LGSSGE--------PTQGCGAVA  159 (396)
Q Consensus       106 Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~------------------~~~~~~--------~t~GaGA~A  159 (396)
                      -+..+|++++.||..|..+|++|....+|+.++|.....                  +....+        +..|-||++
T Consensus       157 tv~~aCas~~~Ai~~A~~~i~~G~~d~~i~GG~d~~~~~~~~~~~~~~~l~~~~~~~P~~~~rPFd~~r~G~v~gEGa~~  236 (406)
T PRK07967        157 SISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELDWEMSCLFDAMGALSTKYNDTPEKASRAYDANRDGFVIAGGGGV  236 (406)
T ss_pred             CCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEE
T ss_conf             54542127889999999999769978777144023575134467777777622477987675666688998414775799


Q ss_pred             EEECCCC-------CCCEEEECCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEE
Q ss_conf             8842687-------630353100015678651127588754235660169899999999999999962988211012331
Q gi|254781019|r  160 ILISSQT-------SILEIEDITGIYTNDCMDFWRPNYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHDFNDFQYFCY  232 (396)
Q Consensus       160 llv~~~~-------~~~~~~~~~~~~~~~~~df~rp~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~~did~~v~  232 (396)
                      +++++..       .+......++. +.|.++..-|.        +    +.    ...+++..++..+   .||||+..
T Consensus       237 lvLE~~e~A~~rGa~i~a~i~g~g~-~~d~~~~~~p~--------~----~g----~~~~~~~al~~~~---~~idyi~a  296 (406)
T PRK07967        237 VVVEELEHALARGAKIYAEIVGYGA-TSDGYDMVAPS--------G----EG----AVRCMQMALATVD---TPIDYINP  296 (406)
T ss_pred             EEEHHHHHHHHCCCEEEEEEECCEE-CCCCCCCCCCC--------H----HH----HHHHHHHHHHCCC---CCCCEEEE
T ss_conf             8610168898689978999935343-15898887987--------8----99----9999999982644---34658995


Q ss_pred             CCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
Q ss_conf             1454057888886411024544100134555433344453238543233899999
Q gi|254781019|r  233 HQPFTRMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALI  287 (396)
Q Consensus       233 H~p~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~  287 (396)
                      |-......+.....-......        +...+....=..+|++-.||=.+.+.
T Consensus       297 Hgtgt~~~D~~E~~Ai~~~fg--------~~~~~v~s~K~~~GH~~~aaGa~e~i  343 (406)
T PRK07967        297 HGTSTPVGDVKELGAIREVFG--------DKCPAISATKSLTGHSLGAAGVQEAI  343 (406)
T ss_pred             ECCCCCCCCHHHHHHHHHHHC--------CCCCCEECCCCCCCCCHHHHHHHHHH
T ss_conf             457687889999999999867--------78983016656545651767999999


No 90 
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=98.78  E-value=1.1e-06  Score=60.54  Aligned_cols=218  Identities=16%  Similarity=0.172  Sum_probs=124.9

Q ss_pred             HHHHHHHHHHHHHCC--HHHCC----EEEEECCCCCCC-------------------CHHHHHHHHHHHCCCCCCEEEEE
Q ss_conf             999999999997279--57868----999945788754-------------------60058888632026877358984
Q gi|254781019|r   53 TMAAAAALPIMQNQD--KNLID----TLFFATESSVDQ-------------------SKSAAIWLHKLLGLNSSCRVVEL  107 (396)
Q Consensus        53 tmA~~Aa~~~L~~~~--~~~Id----~li~~T~t~~~~-------------------~~~~a~~v~~~Lgl~~~~~~~Di  107 (396)
                      -|++++++++|++++  +++++    .+++++.+..+.                   .-..+..|...+++...  ++-+
T Consensus        89 rl~L~~a~eAl~dAG~~~~~~~~~r~GV~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~~~Gp--~~~v  166 (421)
T cd00833          89 RLLLEVAWEALEDAGYSPESLAGSRTGVFVGASSSDYLELLARDPDEIDAYAATGTSRAFLANRISYFFDLRGP--SLTV  166 (421)
T ss_pred             HHHHHHHHHHHHHCCCCHHHCCCCCEEEEECCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC--CCCC
T ss_conf             99999999999752898346488634999666666478897427565785301354311799999999689996--0033


Q ss_pred             CCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC--------CCC--CC-----------CCCCCCCCEEEEEECCCC
Q ss_conf             142035888998789999739997699950332014--------588--87-----------533478302468842687
Q gi|254781019|r  108 KQACYSATCALHMACALVAKSPERKVLIVASDVARY--------DLG--SS-----------GEPTQGCGAVAILISSQT  166 (396)
Q Consensus       108 ~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~--------~~~--~~-----------~~~t~GaGA~Allv~~~~  166 (396)
                      ..||++++.||..|..+|++|....+|+-++|....        ..+  ++           +=+..|.||+++++.+..
T Consensus       167 ~tACaSsl~Ai~~A~~~i~~G~~d~ai~Gg~~~~~~~~~~~~~~~~~~ls~~~~~rpFD~~~~G~v~gEGa~~lvLe~~~  246 (421)
T cd00833         167 DTACSSSLVALHLACQSLRSGECDLALVGGVNLILSPDMFVGFSKAGMLSPDGRCRPFDADADGYVRGEGVGVVVLKRLS  246 (421)
T ss_pred             CCHHHHHHHHHHHHHHHHHCCCCCEEEECEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHH
T ss_conf             53627999999999999857994354412000315868999986357868999856788899986555751354368789


Q ss_pred             -------CCCEEEECCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCCHH
Q ss_conf             -------6303531000156786511275887542356601698999999999999999629882110123311454057
Q gi|254781019|r  167 -------SILEIEDITGIYTNDCMDFWRPNYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHDFNDFQYFCYHQPFTRM  239 (396)
Q Consensus       167 -------~~~~~~~~~~~~~~~~~df~rp~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~~did~~v~H~p~~k~  239 (396)
                             ++.......+...    |.... ....|  +        .+....++++.+++.|++++||+|+-.|-.+..+
T Consensus       247 ~A~~~g~~I~a~i~G~g~~~----dg~~~-~~~~P--~--------~~~~~~~~~~al~~agi~~~~i~yieaHgtgT~~  311 (421)
T cd00833         247 DALRDGDRIYAVIRGSAVNQ----DGRTK-GITAP--S--------GEAQAALIRRAYARAGVDPSDIDYVEAHGTGTPL  311 (421)
T ss_pred             HHHHCCCCEEEEEEEEEECC----CCCCC-CCCCC--C--------HHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCC
T ss_conf             99876994799998999806----89777-88887--5--------6689999999999729994412089974476866


Q ss_pred             HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
Q ss_conf             888886411024544100134555433344453238543233899999999
Q gi|254781019|r  240 AEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALISLL  290 (396)
Q Consensus       240 ~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~slL  290 (396)
                      .+.....-....-....  ....++ +....-..+|++-+|+=.+.|...+
T Consensus       312 gD~~E~~ai~~~f~~~~--~~~~~~-~v~S~Ks~~GH~~~AaG~~~~i~~~  359 (421)
T cd00833         312 GDPIEVEALAKVFGGSR--SADQPL-LIGSVKSNIGHLEAAAGLAGLIKVV  359 (421)
T ss_pred             CCHHHHHHHHHHHCCCC--CCCCCC-CCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf             69999999999961257--777863-0235434534335767999999999


No 91 
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=98.77  E-value=3.9e-07  Score=63.33  Aligned_cols=99  Identities=14%  Similarity=0.101  Sum_probs=84.4

Q ss_pred             CCCCHHHHHHHHHHHHHHHC--CHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHH
Q ss_conf             98599999999999999727--9578689999457887546005888863202687735898414203588899878999
Q gi|254781019|r   47 PDEDIVTMAAAAALPIMQNQ--DKNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACAL  124 (396)
Q Consensus        47 ~~Ed~~tmA~~Aa~~~L~~~--~~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~  124 (396)
                      .+-.+.+|+..+.+.+|++.  +|++||-||++...+.-..+..+-++.-..|++.+++++-++..|.+++.|+.+|...
T Consensus        22 ~~~~~~~L~a~~ik~~l~r~~i~~~~Id~Vi~G~~~~~g~~~~~aR~aaL~aGlp~~vpa~tVnr~C~SGl~Ai~~Aa~~  101 (404)
T PRK06205         22 KPVPAEELAATVLRALVERTGIDPARVDDVIFGQCYPNGEAPAIGRVAALDAGLPVTVPGMQLDRRCGSGLQAVITAAMQ  101 (404)
T ss_pred             CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHH
T ss_conf             99988999999999999981989899897999942656767779999999779898875588815053327899999999


Q ss_pred             HHCCCCCEEEEEECCCCCCCC
Q ss_conf             973999769995033201458
Q gi|254781019|r  125 VAKSPERKVLIVASDVARYDL  145 (396)
Q Consensus       125 i~sg~~~~aLVV~sD~~~~~~  145 (396)
                      |++|....+|+.+.|.++..+
T Consensus       102 I~sG~~dvviaGGvEsmS~~P  122 (404)
T PRK06205        102 VQTGAADVVIAGGAESMSNVE  122 (404)
T ss_pred             HHCCCCCEEEECCCCCCCCCC
T ss_conf             964997778741421246685


No 92 
>PRK07025 consensus
Probab=98.77  E-value=1.7e-07  Score=65.63  Aligned_cols=99  Identities=9%  Similarity=0.100  Sum_probs=84.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHC--CHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHH
Q ss_conf             98599999999999999727--9578689999457887546005888863202687735898414203588899878999
Q gi|254781019|r   47 PDEDIVTMAAAAALPIMQNQ--DKNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACAL  124 (396)
Q Consensus        47 ~~Ed~~tmA~~Aa~~~L~~~--~~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~  124 (396)
                      .+..+.+|++.+++.+|++.  +|++||-|+++...+.......+-.+.-..|++.+++++-++.+|.+++.|+.+|...
T Consensus        22 ~~~~~~~L~~~~i~~~l~r~~i~~~~Id~vi~G~v~~~g~g~n~aR~~al~aGlp~~vp~~tVnr~C~SGl~Ai~~Aa~~  101 (393)
T PRK07025         22 AKIAAPELGATVIRAVLERAGVKPEQVSEVILGQVLTAGSGQNPARQALIKAGLPNAVPGMTINKVCGSGLKAVMLAANA  101 (393)
T ss_pred             CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHH
T ss_conf             88989999999999999982989899898999924765556649999999769998886488841536778999999999


Q ss_pred             HHCCCCCEEEEEECCCCCCCC
Q ss_conf             973999769995033201458
Q gi|254781019|r  125 VAKSPERKVLIVASDVARYDL  145 (396)
Q Consensus       125 i~sg~~~~aLVV~sD~~~~~~  145 (396)
                      |++|....+|+.+.|.++..+
T Consensus       102 I~~G~~dvvlagGvEsmS~~P  122 (393)
T PRK07025        102 IVAGDAEIVVAGGQENMSAAP  122 (393)
T ss_pred             HHCCCCCEEEEEEEEECCCCC
T ss_conf             867997667886011035676


No 93 
>pfam00108 Thiolase_N Thiolase, N-terminal domain. Thiolase is reported to be structurally related to beta-ketoacyl synthase (pfam00109), and also chalcone synthase.
Probab=98.75  E-value=2.1e-07  Score=65.06  Aligned_cols=99  Identities=14%  Similarity=0.148  Sum_probs=85.2

Q ss_pred             CCCCHHHHHHHHHHHHHHHC--CHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHH
Q ss_conf             98599999999999999727--9578689999457887546005888863202687735898414203588899878999
Q gi|254781019|r   47 PDEDIVTMAAAAALPIMQNQ--DKNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACAL  124 (396)
Q Consensus        47 ~~Ed~~tmA~~Aa~~~L~~~--~~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~  124 (396)
                      .+..+.+|++.+.+.+|++.  +|++||.||++...+.....-.+-.+.-..|++.+++++.++..|.+++.|+..|...
T Consensus        22 ~~~~~~~L~~~~~~~~l~r~~~~p~~Id~vi~G~~~~~g~~~n~aR~~~l~aGlp~~vp~~tvnr~C~Sgl~Ai~~Aa~~  101 (264)
T pfam00108        22 KDLSAVDLGAIAIKAALERAGVKPEDVDEVIMGNVLQAGEGQNPARQAALKAGIPDSVPAVTINKVCGSGLKAVALAAQA  101 (264)
T ss_pred             CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHH
T ss_conf             88988999999999999985999688356888436656776629999999769998886689823201799999999999


Q ss_pred             HHCCCCCEEEEEECCCCCCCC
Q ss_conf             973999769995033201458
Q gi|254781019|r  125 VAKSPERKVLIVASDVARYDL  145 (396)
Q Consensus       125 i~sg~~~~aLVV~sD~~~~~~  145 (396)
                      |++|....+|+.+.|.++..+
T Consensus       102 I~~G~~dv~iagGvEsmS~~P  122 (264)
T pfam00108       102 IRAGDADIVVAGGVESMSNAP  122 (264)
T ss_pred             HHCCCCCEEEEECCCCCCCCC
T ss_conf             837987667872213565452


No 94 
>PRK07491 consensus
Probab=98.73  E-value=2.3e-07  Score=64.82  Aligned_cols=99  Identities=13%  Similarity=0.139  Sum_probs=83.6

Q ss_pred             CCCCHHHHHHHHHHHHHHHC--CHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHH
Q ss_conf             98599999999999999727--9578689999457887546005888863202687735898414203588899878999
Q gi|254781019|r   47 PDEDIVTMAAAAALPIMQNQ--DKNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACAL  124 (396)
Q Consensus        47 ~~Ed~~tmA~~Aa~~~L~~~--~~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~  124 (396)
                      .+..+.+|++.+.+.+|++.  +|++||-||++...+.-...-.+-.+.-..|++.+++++-++..|.+++.|+.+|...
T Consensus        23 ~~~~~~~L~~~~i~~~l~r~~l~~~~Id~Vi~G~v~~~g~g~n~aR~~~L~aGlp~~vp~~tVnr~C~SGl~Ai~~Aa~~  102 (392)
T PRK07491         23 ANTPAHELGAVAIKAALERAGVDAADVSEVILGQVLTAGQGQNPARQASIKAGLPQESPAWGINQLCGSGLRAVALGAQQ  102 (392)
T ss_pred             CCCCHHHHHHHHHHHHHHHHCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHH
T ss_conf             99999999999999999871979899898999945755655619999999769898886489806034577899999998


Q ss_pred             HHCCCCCEEEEEECCCCCCCC
Q ss_conf             973999769995033201458
Q gi|254781019|r  125 VAKSPERKVLIVASDVARYDL  145 (396)
Q Consensus       125 i~sg~~~~aLVV~sD~~~~~~  145 (396)
                      |++|....+|+.+.|.++..+
T Consensus       103 I~~G~~dvvlagGvEsmS~~P  123 (392)
T PRK07491        103 IANGDAKIVVAGGQESMSMAP  123 (392)
T ss_pred             HCCCCCCEEEEECCCCCCCCC
T ss_conf             658986467763244235561


No 95 
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=98.72  E-value=3.1e-07  Score=64.02  Aligned_cols=99  Identities=12%  Similarity=0.093  Sum_probs=84.2

Q ss_pred             CCCCHHHHHHHHHHHHHHHC--CHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHH
Q ss_conf             98599999999999999727--9578689999457887546005888863202687735898414203588899878999
Q gi|254781019|r   47 PDEDIVTMAAAAALPIMQNQ--DKNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACAL  124 (396)
Q Consensus        47 ~~Ed~~tmA~~Aa~~~L~~~--~~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~  124 (396)
                      .+..+.+|+..+.+.+|++.  +|++||-+|++...+.......+-.+.-..|++..++++.++..|.+++.|+.+|...
T Consensus        22 ~~~~~~~L~~~~i~~~l~~~gl~~~~Id~vi~G~v~~~~~g~n~ar~~al~aGlp~~vp~~tVnr~C~Sgl~Ai~~A~~~  101 (388)
T PRK06366         22 SKIKAPQLGGAAIKAVIDDAKLDPALVQEVIMGNVIQAGVGQNPAGQAAYHAGLPFGVTKYTVNVVCASGMLAVESAARE  101 (388)
T ss_pred             CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHH
T ss_conf             88998999999999999871989899898999952754556519999999759998886588857255999999999999


Q ss_pred             HHCCCCCEEEEEECCCCCCCC
Q ss_conf             973999769995033201458
Q gi|254781019|r  125 VAKSPERKVLIVASDVARYDL  145 (396)
Q Consensus       125 i~sg~~~~aLVV~sD~~~~~~  145 (396)
                      |++|...-+|+.+.|.++..+
T Consensus       102 I~sG~~dvviagGvEsMS~~P  122 (388)
T PRK06366        102 IMLGERDLVIAGGMENMSNAP  122 (388)
T ss_pred             HHCCCCCEEEEECCCCCCCCC
T ss_conf             966998767870422145785


No 96 
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=98.71  E-value=3.3e-07  Score=63.80  Aligned_cols=99  Identities=14%  Similarity=0.100  Sum_probs=84.2

Q ss_pred             CCCCHHHHHHHHHHHHHHHC--CHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHH
Q ss_conf             98599999999999999727--9578689999457887546005888863202687735898414203588899878999
Q gi|254781019|r   47 PDEDIVTMAAAAALPIMQNQ--DKNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACAL  124 (396)
Q Consensus        47 ~~Ed~~tmA~~Aa~~~L~~~--~~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~  124 (396)
                      .+-++.+|++.+.+.+|++.  +|++||-||++...+.-...-.+-++.-..|++.+++++-++..|.+++.|+.+|...
T Consensus        23 ~~~~~~~L~a~~i~~~l~r~~i~p~~Id~Vi~G~v~~~~~~~n~AR~aaL~aGlp~~vp~~TVnr~C~SGl~Ai~~Aa~~  102 (426)
T PRK08170         23 GPFSASDLAVQAGRALLNRQPFAPDDLDEVILGCAMPSPDEANIGRVAALRLGCGEDVPGWTVQRNCASGMQALDSAARN  102 (426)
T ss_pred             CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHH
T ss_conf             88898999999999999974999899998999933625666779999999769998887267766123799999999999


Q ss_pred             HHCCCCCEEEEEECCCCCCCC
Q ss_conf             973999769995033201458
Q gi|254781019|r  125 VAKSPERKVLIVASDVARYDL  145 (396)
Q Consensus       125 i~sg~~~~aLVV~sD~~~~~~  145 (396)
                      |++|....+|+.+.|.++..+
T Consensus       103 I~~G~~dvviAGGvEsMS~~P  123 (426)
T PRK08170        103 IALGRADLVLAGGTEALSRAP  123 (426)
T ss_pred             HHCCCCCEEEEECCCCCCCCC
T ss_conf             855998889993722045675


No 97 
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=98.69  E-value=4.4e-07  Score=63.01  Aligned_cols=100  Identities=13%  Similarity=0.104  Sum_probs=85.9

Q ss_pred             CCCCCHHHHHHHHHHHHHHHC--CHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHH
Q ss_conf             998599999999999999727--957868999945788754600588886320268773589841420358889987899
Q gi|254781019|r   46 NPDEDIVTMAAAAALPIMQNQ--DKNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACA  123 (396)
Q Consensus        46 ~~~Ed~~tmA~~Aa~~~L~~~--~~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~  123 (396)
                      -.+-.+.+|++.+.+.+|++.  +|++||-||++...+....+-.+-.+.=.-|++.++.++.++..|.+++.|+.+|..
T Consensus        32 l~~~~~~~L~a~~ik~~l~r~~i~p~~Id~Vi~G~v~~~~~g~n~AR~aaL~aGlp~~vp~~TVnr~C~SGl~Ai~~Aa~  111 (436)
T PRK08963         32 FHGVPAVDLGKMVVGELLARSEIDPKLIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVSRACATSFQAVANVAE  111 (436)
T ss_pred             CCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHH
T ss_conf             58899899999999999998298989999899983675676772999999975999888626776322356899999999


Q ss_pred             HHHCCCCCEEEEEECCCCCCCC
Q ss_conf             9973999769995033201458
Q gi|254781019|r  124 LVAKSPERKVLIVASDVARYDL  145 (396)
Q Consensus       124 ~i~sg~~~~aLVV~sD~~~~~~  145 (396)
                      .|++|....+|+.+.|.++..+
T Consensus       112 ~I~~G~~dvvlaGGvEsMS~~P  133 (436)
T PRK08963        112 SIMAGTIDIGIAGGADSSSVLP  133 (436)
T ss_pred             HHHCCCCCEEEEECCCCCCCCC
T ss_conf             9974999789994512246686


No 98 
>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.69  E-value=5.9e-06  Score=56.01  Aligned_cols=258  Identities=18%  Similarity=0.151  Sum_probs=137.1

Q ss_pred             CC-CEEEEEEEECCCEEECHHHHHHHC--CC---------CHHHHHHHCCCCEEEECCCC--------C----C-HHHHH
Q ss_conf             96-206688873489045599999870--99---------98797630383246655998--------5----9-99999
Q gi|254781019|r    1 MA-IGIEDISFYTTNQYLDLSVIAEKY--RL---------DVAKFYVGIGQERMSVLNPD--------E----D-IVTMA   55 (396)
Q Consensus         1 M~-vGI~~i~~y~P~~~v~~~~l~~~~--g~---------~~~k~~~~lGi~~r~v~~~~--------E----d-~~tmA   55 (396)
                      |+ |-|++||.-.|--. +.+++-+..  |.         +++.+...++   -.+.+.+        |    | ...|+
T Consensus         1 MrRVvITGiG~vsp~G~-~~e~~w~~L~~G~sgi~~~~~~d~~~~~~~~a---g~v~~fd~~~~~~~~~~~~~dr~~~la   76 (405)
T PRK08439          1 MKRVVVTGMGMINSLGL-DKESSFKAICNGECGIKKITLFDASDFPVKIA---GEITDFDPTEVMDPKEVKKADRFIQLG   76 (405)
T ss_pred             CCCEEEECCEEECCCCC-CHHHHHHHHHCCCCCEEECCCCCCCCCCCEEE---EEECCCCHHHCCCHHHHHHHCHHHHHH
T ss_conf             97199973134798718-99999999983999777488767668974189---983887956738999998628999999


Q ss_pred             HHHHHHHHHHCCH------HHCCEEEEECCCCCC----------------C-CH---------HHHHHHHHHHCCCCCCE
Q ss_conf             9999999972795------786899994578875----------------4-60---------05888863202687735
Q gi|254781019|r   56 AAAALPIMQNQDK------NLIDTLFFATESSVD----------------Q-SK---------SAAIWLHKLLGLNSSCR  103 (396)
Q Consensus        56 ~~Aa~~~L~~~~~------~~Id~li~~T~t~~~----------------~-~~---------~~a~~v~~~Lgl~~~~~  103 (396)
                      +.|++++|++++.      +.++ ++++|..+..                . .|         ..+..|...+++...  
T Consensus        77 l~aa~eAl~dAGl~~~~~~~r~G-v~~gt~~g~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~a~~is~~~~~~Gp--  153 (405)
T PRK08439         77 LKAAREAMKDAGFLEEHDKDRFG-VSSASGIGGLPNIEKNSIICFEKGPRKISPFFIPSALVNMLGGFISIEHGLKGP--  153 (405)
T ss_pred             HHHHHHHHHHCCCCCCCCCCCEE-EEEEECCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC--
T ss_conf             99999999844877557756679-999866775577999999998469764480276788888999999998399897--


Q ss_pred             EEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC-----------C----CCC---CC--------CCCCCCE
Q ss_conf             89841420358889987899997399976999503320145-----------8----887---53--------3478302
Q gi|254781019|r  104 VVELKQACYSATCALHMACALVAKSPERKVLIVASDVARYD-----------L----GSS---GE--------PTQGCGA  157 (396)
Q Consensus       104 ~~Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~-----------~----~~~---~~--------~t~GaGA  157 (396)
                      ++-+..||++++.||..|..+|++|....+||.++|.....           +    +++   .+        +..|-||
T Consensus       154 ~~tv~tACass~~Ai~~A~~~I~~G~~d~~ivgG~~~~l~~~~~~~f~~~~~ls~~~~~P~~~~rPFD~~r~G~v~gEGa  233 (405)
T PRK08439        154 NLSSVTACAAGTHAIIEAVKTIMLGGADKMLVVGAESAICPVGIGGFASMKALSTRNDDPKKASRPFDKDRDGFVMGEGA  233 (405)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCE
T ss_conf             65626375899999999999997089776774150220273568999875323025889654667876899847742467


Q ss_pred             EEEEECCCC-------CCCEEEECCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEE
Q ss_conf             468842687-------6303531000156786511275887542356601698999999999999999629882110123
Q gi|254781019|r  158 VAILISSQT-------SILEIEDITGIYTNDCMDFWRPNYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHDFNDFQYF  230 (396)
Q Consensus       158 ~Allv~~~~-------~~~~~~~~~~~~~~~~~df~rp~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~~did~~  230 (396)
                      +++++++..       ++......++. +.|......|..      +|          ...+++..+++.|++  +|||+
T Consensus       234 ~~lvLe~~~~A~~rga~i~a~i~G~~~-~~d~~~~t~P~~------~g----------~~~a~~~Al~~ag~~--~idyi  294 (405)
T PRK08439        234 GALVLEEYESAKKRGAKIYAELIGFGE-SGDANHITSPAP------DG----------PLRAMKKALEMAGNP--KVDYV  294 (405)
T ss_pred             EEEEECCHHHHHHCCCEEEEEEEEECC-CCCCCCCCCCCH------HH----------HHHHHHHHHHHCCCC--CEEEE
T ss_conf             889724488786579968999998767-668889989898------99----------999999999975999--61179


Q ss_pred             EECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
Q ss_conf             311454057888886411024544100134555433344453238543233899999999
Q gi|254781019|r  231 CYHQPFTRMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALISLL  290 (396)
Q Consensus       231 v~H~p~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~slL  290 (396)
                      ..|-.+.++.+....+-.+.+..+.     . ..-+....-..+|++-.||=-+.+...+
T Consensus       295 ~aHgTgT~~gD~~E~~Ai~~vfg~~-----~-~~~~v~S~Ks~iGH~~gAaG~~e~i~~~  348 (405)
T PRK08439        295 NAHGTSTPYNDKNETAALKELFGSK-----E-NVPPVSSTKGQIGHCLGAAGAIEAVISI  348 (405)
T ss_pred             EEECCCCCCCCHHHHHHHHHHHCCC-----C-CCCCCCCCHHHHCCCHHHHHHHHHHHHH
T ss_conf             7205768787899999999985666-----7-7888657310003236667899999999


No 99 
>TIGR02845 spore_V_AD stage V sporulation protein AD; InterPro: IPR010894   This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation ..
Probab=98.68  E-value=1.1e-06  Score=60.46  Aligned_cols=179  Identities=21%  Similarity=0.185  Sum_probs=115.8

Q ss_pred             CCCHHHHH-----HHHHHHHHHHCC--HH--HCCEEEEECCCCCCCCHH--HHHHHHHHHCCCCCCEEEEECCCHHHHHH
Q ss_conf             85999999-----999999997279--57--868999945788754600--58888632026877358984142035888
Q gi|254781019|r   48 DEDIVTMA-----AAAALPIMQNQD--KN--LIDTLFFATESSVDQSKS--AAIWLHKLLGLNSSCRVVELKQACYSATC  116 (396)
Q Consensus        48 ~Ed~~tmA-----~~Aa~~~L~~~~--~~--~Id~li~~T~t~~~~~~~--~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~  116 (396)
                      +||+..||     .+|+..||++++  .+  +||+++=     -|..-+  +|+++.+.|+++ .   +=+=.||+-++-
T Consensus        42 ge~SwEkAEr~lm~~Av~~aL~Ka~l~~~PP~vD~~LA-----GDLLNQ~~~anFvAR~L~iP-f---lGLygACsTs~E  112 (331)
T TIGR02845        42 GEDSWEKAERKLMEDAVNLALKKANLKKDPPDVDFFLA-----GDLLNQIITANFVARELGIP-F---LGLYGACSTSME  112 (331)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEH-----HHHHHHHHHHHHHHHHCCCC-C---EECCCHHHHHHH
T ss_conf             72018999999999999998753587127872111201-----03666789998988745888-2---340213578999


Q ss_pred             HHHHHHHHHHCCCCCEEEEEECCCCC---CCCCCCCCCC-----------CCCCEEEEEECCCCCCCEEEECCCCCCCCC
Q ss_conf             99878999973999769995033201---4588875334-----------783024688426876303531000156786
Q gi|254781019|r  117 ALHMACALVAKSPERKVLIVASDVAR---YDLGSSGEPT-----------QGCGAVAILISSQTSILEIEDITGIYTNDC  182 (396)
Q Consensus       117 AL~~A~~~i~sg~~~~aLVV~sD~~~---~~~~~~~~~t-----------~GaGA~Allv~~~~~~~~~~~~~~~~~~~~  182 (396)
                      +|.++..||..|=.+++|.-+|-...   ...+.|-|+.           =||||+  |+++.+....+...+...-.|.
T Consensus       113 ~L~~gA~lv~GGfAd~vLaAtSSHy~taERQFRYPTEyG~Qkp~tAq~TVTGAGA~--~l~~~~~~~~it~aT~GkV~D~  190 (331)
T TIGR02845       113 TLALGAMLVDGGFADRVLAATSSHYATAERQFRYPTEYGVQKPPTAQWTVTGAGAV--LLASTGGGPRITSATIGKVVDL  190 (331)
T ss_pred             HHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEHHHEE--EECCCCCCCEEEEEEEEEEEEC
T ss_conf             99999999832002211112111135322102565125611599886125034648--6544789436414530147712


Q ss_pred             CCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCCC-CHHHHHHHHHHCCH
Q ss_conf             511275887542356601698999999999999999629882110123311454-05788888641102
Q gi|254781019|r  183 MDFWRPNYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHDFNDFQYFCYHQPF-TRMAEKAHIRLSKI  250 (396)
Q Consensus       183 ~df~rp~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~~did~~v~H~p~-~k~~~~~~~~l~~~  250 (396)
                      . ..-|..     | |    ..-.-+--..++.-+++.|.+.+|+|.++-  .. +++.+...++|+..
T Consensus       191 G-~~dP~~-----m-G----~AMAPAAaDTI~~Hf~dtg~~~~DYDLIvT--GDL~rvG~~I~~~LL~e  246 (331)
T TIGR02845       191 G-LTDPLD-----M-G----AAMAPAAADTIEAHFKDTGRSVDDYDLIVT--GDLARVGSEILRKLLKE  246 (331)
T ss_pred             C-CCCCCC-----H-H----HHHHHHHHHHHHHHHHHCCCCCCEEEEEEE--CCHHHHHHHHHHHHHHH
T ss_conf             3-368641-----1-3----541268999999999870788040136787--33002148999999888


No 100
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=98.65  E-value=6.5e-07  Score=61.96  Aligned_cols=99  Identities=12%  Similarity=0.003  Sum_probs=82.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHCC--HHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHH
Q ss_conf             985999999999999997279--578689999457887546005888863202687735898414203588899878999
Q gi|254781019|r   47 PDEDIVTMAAAAALPIMQNQD--KNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACAL  124 (396)
Q Consensus        47 ~~Ed~~tmA~~Aa~~~L~~~~--~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~  124 (396)
                      .+-.+.+|++.+.+.+|++.+  |++||-||++...+.-...-.+-.+.=.-|++.+++++-++..|.+++.|+.+|...
T Consensus        27 ~~~~~~~L~~~~i~~~l~r~gi~~~~iD~vi~G~v~~~g~~~n~aR~~aL~aGlp~~vp~~TVnr~C~SGl~Ai~~Aa~~  106 (428)
T PRK09268         27 ADASNQDMLTAALDGLVERFGLHGERLGEVVAGAVLKHSRDFNLTRECVLGSALSPETPAYDLQQACGTGLEAAILVANK  106 (428)
T ss_pred             CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHHHHHHHH
T ss_conf             88988999999999999982999899998999935765656539999999669898887268852757999999999999


Q ss_pred             HHCCCCCEEEEEECCCCCCCC
Q ss_conf             973999769995033201458
Q gi|254781019|r  125 VAKSPERKVLIVASDVARYDL  145 (396)
Q Consensus       125 i~sg~~~~aLVV~sD~~~~~~  145 (396)
                      |++|....+|+.+.|.++..+
T Consensus       107 I~~G~~dvviAGGvEsmS~~P  127 (428)
T PRK09268        107 IALGQIDSGIAGGVDTTSDAP  127 (428)
T ss_pred             HHCCCCCEEEEECCCCCCCCC
T ss_conf             987999889994612356787


No 101
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=98.64  E-value=7.3e-07  Score=61.67  Aligned_cols=99  Identities=13%  Similarity=0.091  Sum_probs=82.5

Q ss_pred             CCCCHHHHHHHHHHHHHHHC--CHHHCCEEEEECCCCCCC-CHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHH
Q ss_conf             98599999999999999727--957868999945788754-600588886320268773589841420358889987899
Q gi|254781019|r   47 PDEDIVTMAAAAALPIMQNQ--DKNLIDTLFFATESSVDQ-SKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACA  123 (396)
Q Consensus        47 ~~Ed~~tmA~~Aa~~~L~~~--~~~~Id~li~~T~t~~~~-~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~  123 (396)
                      .+-.+.+|++.+.+.+|++.  +|++||-++++...+... ..-.+-...-.-|++..++++-++.+|.+++.|+..|..
T Consensus        22 ~~~~~~~L~a~~i~~~l~r~~i~~~~Id~vi~G~v~~~g~~~~n~aR~~al~aGlp~~vp~~tVnr~CaSGl~Ai~~Aa~  101 (401)
T PRK08131         22 ASVRPDDLAATVIRRLVEKSGFAGDDIEDVILGCTNQAGEDSRNVARNALLLAGLPVTVPGQTVNRLCASGLSAVIDAAR  101 (401)
T ss_pred             CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHH
T ss_conf             99988999999999999972989899898999814665654466999999966999888716875253578999999999


Q ss_pred             HHHCCCCCEEEEEECCCCCCCC
Q ss_conf             9973999769995033201458
Q gi|254781019|r  124 LVAKSPERKVLIVASDVARYDL  145 (396)
Q Consensus       124 ~i~sg~~~~aLVV~sD~~~~~~  145 (396)
                      .|++|....+|+.+.|.++..+
T Consensus       102 ~I~~G~~dvvlagGvEsMS~~P  123 (401)
T PRK08131        102 AITCGEGDLYLAGGVESMSRAP  123 (401)
T ss_pred             HHHCCCCCEEEEEEEECCCCCC
T ss_conf             9857997725885065035464


No 102
>PRK06689 consensus
Probab=98.59  E-value=1.3e-06  Score=60.18  Aligned_cols=99  Identities=10%  Similarity=0.081  Sum_probs=82.3

Q ss_pred             CCCCHHHHHHHHHHHHHHHC--CHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHH
Q ss_conf             98599999999999999727--9578689999457887546005888863202687735898414203588899878999
Q gi|254781019|r   47 PDEDIVTMAAAAALPIMQNQ--DKNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACAL  124 (396)
Q Consensus        47 ~~Ed~~tmA~~Aa~~~L~~~--~~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~  124 (396)
                      .+..+.+|++.+.+.+|++.  +|++||-||++.+.+.-...-.+-+..=..|++.+++++.++..|.+++.|+.+|...
T Consensus        22 ~~~~~~~L~a~~i~~~l~r~gi~p~~Id~vi~G~~~~~g~~~n~AR~aaL~aGlp~~vp~~tVnr~C~Sgl~Ai~~aa~~  101 (391)
T PRK06689         22 KNVTPVELAVPVLQEAVKRGGVEPHEVDEVILGHCIQRTDEANTARTAALAAGFPDTVTGYTIQRQCSSGMQAIMSAAMQ  101 (391)
T ss_pred             CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHHHHH
T ss_conf             88988999999999999874999799898999806676666609999999769998887067766215789999999999


Q ss_pred             HHCCCCCEEEEEECCCCCCCC
Q ss_conf             973999769995033201458
Q gi|254781019|r  125 VAKSPERKVLIVASDVARYDL  145 (396)
Q Consensus       125 i~sg~~~~aLVV~sD~~~~~~  145 (396)
                      |++|....+|+.+.|.++..+
T Consensus       102 I~~G~~dvviAGGvEsMS~~P  122 (391)
T PRK06689        102 IQLGVSEVVVAGGVEAMSSSP  122 (391)
T ss_pred             HHCCCCCEEEEECCCCCCCCC
T ss_conf             867998656860434677774


No 103
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=98.53  E-value=2.3e-06  Score=58.60  Aligned_cols=99  Identities=13%  Similarity=0.103  Sum_probs=81.7

Q ss_pred             CCCCHHHHHHHHHHHHHHHC--CHHHCCEEEEECCCCCC-CCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHH
Q ss_conf             98599999999999999727--95786899994578875-4600588886320268773589841420358889987899
Q gi|254781019|r   47 PDEDIVTMAAAAALPIMQNQ--DKNLIDTLFFATESSVD-QSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACA  123 (396)
Q Consensus        47 ~~Ed~~tmA~~Aa~~~L~~~--~~~~Id~li~~T~t~~~-~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~  123 (396)
                      .+-.+.+|+..+.+.+|++.  +|++||-|+++...... ...-.+-...=.-|++.+++++.++..|.+++.|+.+|..
T Consensus        22 ~~~~~~~L~a~~ik~~l~r~~l~~~~id~Vi~G~v~~~g~~g~n~aR~aaL~aGlp~~vpa~tVnr~C~Sgl~Ai~~aa~  101 (387)
T PRK07850         22 SGLHAAELLGAVQRAVVERAGIDPGDVEQVIGGCVTQAGEQSNNITRVAWLTAGLPEHVGATTVDCQCGSAQQANHLVAG  101 (387)
T ss_pred             CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHH
T ss_conf             99988999999999999872989899798999878676554568999999977999767606563511178999999999


Q ss_pred             HHHCCCCCEEEEEECCCCCCCC
Q ss_conf             9973999769995033201458
Q gi|254781019|r  124 LVAKSPERKVLIVASDVARYDL  145 (396)
Q Consensus       124 ~i~sg~~~~aLVV~sD~~~~~~  145 (396)
                      .|++|....+|+.+.|.++..+
T Consensus       102 ~I~~G~~dv~iaGG~EsmS~~P  123 (387)
T PRK07850        102 LIAAGAIDVGIACGIEAMSRVP  123 (387)
T ss_pred             HHHCCCCCEEEEECCCCCCCCC
T ss_conf             9877998899982503036787


No 104
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases; InterPro: IPR002155   Two different types of thiolase , ,  are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis.   In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes.   There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction.   Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases ..
Probab=98.52  E-value=1.4e-06  Score=59.90  Aligned_cols=99  Identities=15%  Similarity=0.164  Sum_probs=83.5

Q ss_pred             CCCCHHHHHHHHHHHHHHHC-C--HHHCCEEEEECCCCCCCC-HHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHH
Q ss_conf             98599999999999999727-9--578689999457887546-0058888632026877358984142035888998789
Q gi|254781019|r   47 PDEDIVTMAAAAALPIMQNQ-D--KNLIDTLFFATESSVDQS-KSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMAC  122 (396)
Q Consensus        47 ~~Ed~~tmA~~Aa~~~L~~~-~--~~~Id~li~~T~t~~~~~-~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~  122 (396)
                      .+-.+.+|++.+.+.+|++. +  |++||.||++...+.-.- .-.+=...=.-|++.+++++.|+..|.+++.|+..|.
T Consensus        20 ~~~~a~dL~~~~i~~ll~r~p~l~~~~iD~vi~G~V~~~g~~g~~~aR~aaL~AGl~~~vpa~tvnr~CaSGl~Av~~aa   99 (447)
T TIGR01930        20 KDLSAEDLGAAVIKELLERNPGLDPELIDDVILGNVLQAGEQGQNIARQAALAAGLPESVPALTVNRQCASGLQAVALAA   99 (447)
T ss_pred             CCCCHHHHHHHHHHHHHHHCCCCCHHHCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHHHHHH
T ss_conf             78787999999999999853688846728177610005776441489999987068987873442023242799999999


Q ss_pred             HHHHCCCCCEEEEEECCCCCCCC
Q ss_conf             99973999769995033201458
Q gi|254781019|r  123 ALVAKSPERKVLIVASDVARYDL  145 (396)
Q Consensus       123 ~~i~sg~~~~aLVV~sD~~~~~~  145 (396)
                      ..|++|...-+|.=+.|.++..|
T Consensus       100 ~~I~~G~~d~~~AGGvEsMS~~P  122 (447)
T TIGR01930       100 QKIRAGEADVVVAGGVESMSRVP  122 (447)
T ss_pred             HHHHCCCCCEEEEECCCCCCCCC
T ss_conf             88534850167860745446675


No 105
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=98.52  E-value=2.4e-06  Score=58.40  Aligned_cols=99  Identities=13%  Similarity=0.149  Sum_probs=82.0

Q ss_pred             CCCCHHHHHHHHHHHHHHH---CCHHHCCEEEEECCCCCCC-CHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHH
Q ss_conf             9859999999999999972---7957868999945788754-60058888632026877358984142035888998789
Q gi|254781019|r   47 PDEDIVTMAAAAALPIMQN---QDKNLIDTLFFATESSVDQ-SKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMAC  122 (396)
Q Consensus        47 ~~Ed~~tmA~~Aa~~~L~~---~~~~~Id~li~~T~t~~~~-~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~  122 (396)
                      .+..+.+|++.+++.+|++   .+|++||-+|++...+... ..-.+-.+.-..|++.+++++-++..|.+++.|+.+|.
T Consensus        22 ~~~~~~~L~a~~i~~~l~r~~~l~~~~Id~vi~G~~~~~g~~g~n~aR~aal~aGlp~~vpa~TVnr~C~SGl~Ai~~Aa  101 (401)
T PRK09050         22 SSVRADDLGAVPLKALMERNPGVDWEAVDDVIYGCANQAGEDNRNVARMSALLAGLPVSVPGTTINRLCGSGMDAVGTAA  101 (401)
T ss_pred             CCCCHHHHHHHHHHHHHHHCCCCCHHHCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHH
T ss_conf             99988999999999999735896989989599963776574557699999997799988855786013078999999999


Q ss_pred             HHHHCCCCCEEEEEECCCCCCCC
Q ss_conf             99973999769995033201458
Q gi|254781019|r  123 ALVAKSPERKVLIVASDVARYDL  145 (396)
Q Consensus       123 ~~i~sg~~~~aLVV~sD~~~~~~  145 (396)
                      ..|++|....+|+.+.|.++..+
T Consensus       102 ~~I~~G~~dv~iaGGvEsmS~~P  124 (401)
T PRK09050        102 RAIKAGEAELMIAGGVESMSRAP  124 (401)
T ss_pred             HHHHCCCCCEEEEECCCCCCCCC
T ss_conf             99847997779861423556563


No 106
>PRK08234 consensus
Probab=98.51  E-value=2.6e-06  Score=58.28  Aligned_cols=99  Identities=15%  Similarity=0.151  Sum_probs=83.2

Q ss_pred             CCCCHHHHHHHHHHHHHHH---CCHHHCCEEEEECCCCCCC-CHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHH
Q ss_conf             9859999999999999972---7957868999945788754-60058888632026877358984142035888998789
Q gi|254781019|r   47 PDEDIVTMAAAAALPIMQN---QDKNLIDTLFFATESSVDQ-SKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMAC  122 (396)
Q Consensus        47 ~~Ed~~tmA~~Aa~~~L~~---~~~~~Id~li~~T~t~~~~-~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~  122 (396)
                      .+..+.+|++.+.+.+|++   .+|++||.+|++...+... .+-.+-.+.-.-|++.+++++-++..|.+++.|+.+|.
T Consensus        22 ~~~~~~~L~a~~i~~~l~r~~~~~~~~Id~vi~G~v~~~g~~~~n~aR~aaL~aGlp~~vpa~tVnr~C~SGl~Ai~~Aa  101 (400)
T PRK08234         22 RDVRPDDLAAVVIRALIERNPNVPVEQIDDVVFGNANQAGEDNRNVARMAALLAGLPVEVAGVTVNRLCGSGLDAVAYAA  101 (400)
T ss_pred             CCCCHHHHHHHHHHHHHHHCCCCCHHHCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHH
T ss_conf             88988999999999999746896989989899990676564446699999997699988861677153035999999999


Q ss_pred             HHHHCCCCCEEEEEECCCCCCCC
Q ss_conf             99973999769995033201458
Q gi|254781019|r  123 ALVAKSPERKVLIVASDVARYDL  145 (396)
Q Consensus       123 ~~i~sg~~~~aLVV~sD~~~~~~  145 (396)
                      ..|++|....+|+.+.|.++..+
T Consensus       102 ~~I~~G~~dvviagGvEsmS~~P  124 (400)
T PRK08234        102 RAIWAGEGEIMIAGGTESMTRAP  124 (400)
T ss_pred             HHHHCCCCCEEEECCCCCCCCCC
T ss_conf             99858997578851524434364


No 107
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=98.50  E-value=2.3e-05  Score=52.35  Aligned_cols=96  Identities=14%  Similarity=0.150  Sum_probs=77.6

Q ss_pred             CCCCHHHHHHHHHHHHHHHCCHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHH
Q ss_conf             98599999999999999727957868999945788754600588886320268773589841420358889987899997
Q gi|254781019|r   47 PDEDIVTMAAAAALPIMQNQDKNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACALVA  126 (396)
Q Consensus        47 ~~Ed~~tmA~~Aa~~~L~~~~~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i~  126 (396)
                      .+..+.+|+..+.+.+.++. |++||-|+++...+.-  ...+-.+.-..|++.+++++-++..|.+++.|+.+|...|+
T Consensus        21 ~~~~~~~L~~~~i~~l~~~~-~~~Id~vi~G~v~~~g--~n~aR~aaL~aGlp~~vp~~tVnr~C~SGl~Av~~aa~~I~   97 (361)
T PRK06690         21 KDYEVQQLAAPLLTFLSKGM-ERAIDDVILGNVVGPG--GNVARLSALEAGLGLHIPGVTIDRQCGAGLEAIRTACHFIQ   97 (361)
T ss_pred             CCCCHHHHHHHHHHHHHHCC-CCCCCEEEEEECCCCC--CHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHH
T ss_conf             89988999999999997279-1116859999567767--50999999975999888758887531588999999999996


Q ss_pred             CCCCCEEEEEECCCCCCCC
Q ss_conf             3999769995033201458
Q gi|254781019|r  127 KSPERKVLIVASDVARYDL  145 (396)
Q Consensus       127 sg~~~~aLVV~sD~~~~~~  145 (396)
                      +|....+++.+.|.++..+
T Consensus        98 ~G~~dvviAGGvEsmS~~P  116 (361)
T PRK06690         98 GGAGKCYIAGGVESTSTSP  116 (361)
T ss_pred             CCCCCEEEECCCCHHCCCC
T ss_conf             7999989984701401252


No 108
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=98.43  E-value=5.4e-06  Score=56.28  Aligned_cols=99  Identities=12%  Similarity=0.137  Sum_probs=82.0

Q ss_pred             CCCCHHHHHHHHHHHHHHH---CCHHHCCEEEEECCCCCCC-CHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHH
Q ss_conf             9859999999999999972---7957868999945788754-60058888632026877358984142035888998789
Q gi|254781019|r   47 PDEDIVTMAAAAALPIMQN---QDKNLIDTLFFATESSVDQ-SKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMAC  122 (396)
Q Consensus        47 ~~Ed~~tmA~~Aa~~~L~~---~~~~~Id~li~~T~t~~~~-~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~  122 (396)
                      .+..+.+|++.+.+.++++   .+|++||-||++...+... ..-.+-...-..|++..++++-++..|.+++.|+.+|.
T Consensus        22 ~~~~~~~L~a~~i~~~l~r~~~i~~~~Id~Vi~G~~~~~g~~g~n~aR~~aL~aGlp~~vpa~TVnr~C~SGl~Ai~~aa  101 (400)
T PRK13359         22 SSVRADDLGAVPLKALVERNRDVDWAAIDDVIYGCANQAGEDNRNVARMSLLLAGLPHGVPGTTINRLCGSGMDAVGVAA  101 (400)
T ss_pred             CCCCHHHHHHHHHHHHHHHCCCCCHHHCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHH
T ss_conf             99988999999999999726997989999799982775565457689999997699988762676132114999999999


Q ss_pred             HHHHCCCCCEEEEEECCCCCCCC
Q ss_conf             99973999769995033201458
Q gi|254781019|r  123 ALVAKSPERKVLIVASDVARYDL  145 (396)
Q Consensus       123 ~~i~sg~~~~aLVV~sD~~~~~~  145 (396)
                      ..|++|....+|+.+.|.++..+
T Consensus       102 ~~I~~G~~dvviAGGvEsmS~~P  124 (400)
T PRK13359        102 RAIKSGEAALMIAGGVESMSRAP  124 (400)
T ss_pred             HHHHCCCCCEEEECCEECCCCCC
T ss_conf             99857998878851551155564


No 109
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=98.25  E-value=1.7e-05  Score=53.21  Aligned_cols=99  Identities=13%  Similarity=0.116  Sum_probs=81.7

Q ss_pred             CCCCHHHHHHHHHHHHHHHCCH-HHCCEEEEECCCCCC-CCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHH
Q ss_conf             9859999999999999972795-786899994578875-46005888863202687735898414203588899878999
Q gi|254781019|r   47 PDEDIVTMAAAAALPIMQNQDK-NLIDTLFFATESSVD-QSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACAL  124 (396)
Q Consensus        47 ~~Ed~~tmA~~Aa~~~L~~~~~-~~Id~li~~T~t~~~-~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~  124 (396)
                      .+-.+.+|++.+.+.+|++.+. .+||-||++...+.- ...-.+-++.-.-|++..++++-++..|.+++.|+.+|...
T Consensus        17 ~~~~~~~L~a~~i~~~l~r~~i~~~id~vi~G~~~~~~~~g~n~aR~aal~aGlp~~vp~~TVnr~C~SGl~Ai~~aa~~   96 (384)
T PRK07661         17 KTVRPDDLGALVVKETLKRANYEGPIDDLIIGCAMPEAEQGLNMARNIGALAGLPYTVPAITINRYCSSGLQSIAYGAER   96 (384)
T ss_pred             CCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHH
T ss_conf             99999999999999999860989635969999476646556669999999769998877267735021689999999999


Q ss_pred             HHCCCCCEEEEEECCCCCCCC
Q ss_conf             973999769995033201458
Q gi|254781019|r  125 VAKSPERKVLIVASDVARYDL  145 (396)
Q Consensus       125 i~sg~~~~aLVV~sD~~~~~~  145 (396)
                      |++|...-+|+.+.|.++..+
T Consensus        97 I~~G~~dvviAGGvEsMS~~P  117 (384)
T PRK07661         97 IMLGHSEAVLAGGAESMSLVP  117 (384)
T ss_pred             HHCCCCCEEEECCEECCCCCC
T ss_conf             976997678754621225786


No 110
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.22  E-value=0.00012  Score=47.90  Aligned_cols=179  Identities=18%  Similarity=0.155  Sum_probs=110.3

Q ss_pred             CHHHHHHHHHHHHHHHCCHH---HCC---EEEEECCCCCCC----------------------C----H-HHHHHHHHHH
Q ss_conf             99999999999999727957---868---999945788754----------------------6----0-0588886320
Q gi|254781019|r   50 DIVTMAAAAALPIMQNQDKN---LID---TLFFATESSVDQ----------------------S----K-SAAIWLHKLL   96 (396)
Q Consensus        50 d~~tmA~~Aa~~~L~~~~~~---~Id---~li~~T~t~~~~----------------------~----~-~~a~~v~~~L   96 (396)
                      ....+++.|+.+||++++.+   ..+   .++++|..+...                      .    + ..+..|...+
T Consensus        70 ~~~~~a~~Aa~~Al~dAgl~~~~~~~~r~gv~iGsg~gg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~vs~~~  149 (412)
T COG0304          70 RFSQLAVVAAVEALEDAGLDNELNVDMRVGVAIGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNLAAGNVAIVF  149 (412)
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHCCCHHHHHHHHHH
T ss_conf             89999999999999975998433568627999931677841256678888752786676820566653514789999985


Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC---------------CCCCC---CCC--------
Q ss_conf             2687735898414203588899878999973999769995033201---------------45888---753--------
Q gi|254781019|r   97 GLNSSCRVVELKQACYSATCALHMACALVAKSPERKVLIVASDVAR---------------YDLGS---SGE--------  150 (396)
Q Consensus        97 gl~~~~~~~Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~---------------~~~~~---~~~--------  150 (396)
                      |+..  +.+-+..||..+..|+..|..+|+.|....+++.++|-..               ..-++   ..+        
T Consensus       150 g~~G--~~~t~~tACatg~~aIg~A~~~I~~G~ad~~iaGG~e~~i~~~~i~gF~a~~Alst~nd~p~~asrPfd~~RdG  227 (412)
T COG0304         150 GLKG--PNYTPVTACATGAHAIGDAVRLIRLGKADVVIAGGAEAAITPLGIAGFEAMRALSTRNDDPEKASRPFDKNRDG  227 (412)
T ss_pred             CCCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
T ss_conf             8778--76780666776888999999999739999899846533158989999998787567889953358888888997


Q ss_pred             CCCCCCEEEEEECCCC-------CCCEEEECCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             3478302468842687-------630353100015678651127588754235660169899999999999999962988
Q gi|254781019|r  151 PTQGCGAVAILISSQT-------SILEIEDITGIYTNDCMDFWRPNYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHD  223 (396)
Q Consensus       151 ~t~GaGA~Allv~~~~-------~~~~~~~~~~~~~~~~~df~rp~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~  223 (396)
                      |..|-||.++++....       ++..+...++. +.|.++.-.|..      +|.        -...+++..|+..|++
T Consensus       228 FV~gEGag~lVLE~~ehA~aRGA~Iyaei~G~g~-~~Da~h~t~P~p------~g~--------Ga~~am~~AL~~Agl~  292 (412)
T COG0304         228 FVIGEGAGALVLEELEHALARGAKIYAEIVGYGT-TSDAYHITAPAP------DGE--------GAIRAMRAALADAGLT  292 (412)
T ss_pred             EEEECCEEEEEECCHHHHHHCCCCEEEEEEEEEE-CCCCCCCCCCCC------CCC--------HHHHHHHHHHHHCCCC
T ss_conf             7885404578863762486689965899987773-144013678997------875--------6999999999984999


Q ss_pred             HHHCCEEEECCCCCHHHHHHHH
Q ss_conf             2110123311454057888886
Q gi|254781019|r  224 FNDFQYFCYHQPFTRMAEKAHI  245 (396)
Q Consensus       224 ~~did~~v~H~p~~k~~~~~~~  245 (396)
                      ++||||+..|-.+.+.-++...
T Consensus       293 ~~~idYinaHgTsT~~nD~~E~  314 (412)
T COG0304         293 PEDIDYINAHGTSTPANDKAES  314 (412)
T ss_pred             HHHCCEEECCCCCCCCCCHHHH
T ss_conf             7679989478766877659999


No 111
>PRK08304 stage V sporulation protein AD; Validated
Probab=98.07  E-value=0.00039  Score=44.74  Aligned_cols=237  Identities=18%  Similarity=0.139  Sum_probs=126.5

Q ss_pred             HHHHHHHHHHHHHHHCC--HHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCC
Q ss_conf             99999999999997279--5786899994578875460058888632026877358984142035888998789999739
Q gi|254781019|r   51 IVTMAAAAALPIMQNQD--KNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACALVAKS  128 (396)
Q Consensus        51 ~~tmA~~Aa~~~L~~~~--~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i~sg  128 (396)
                      -..|--+|+..+|.+++  ++|||.++-+---.   ---.+++..+.|++    +-+-+-.||+-..-+|.+|.-+|..|
T Consensus        56 E~~m~~~A~~~al~Ka~l~~~dId~~~aGDLln---Q~i~s~f~ar~l~I----Pf~GlyGACST~~Esl~laa~~vdgg  128 (336)
T PRK08304         56 ESKLMSDAIQQALQKANLKESDIDYLLAGDLLN---QTISANFVARELGI----PFLGLYGACSTMMESLALASMLIDGG  128 (336)
T ss_pred             HHHHHHHHHHHHHHHCCCCHHHCEEEEECHHHH---HHHHHHHHHHHCCC----CEEEHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             999999999999997499977873897222455---46776677986599----80102567788999999999998266


Q ss_pred             CCCEEEEEECCCC-C--CCCCCCCCC------C-----CCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCE
Q ss_conf             9976999503320-1--458887533------4-----783024688426876303531000156786511275887542
Q gi|254781019|r  129 PERKVLIVASDVA-R--YDLGSSGEP------T-----QGCGAVAILISSQTSILEIEDITGIYTNDCMDFWRPNYRRTA  194 (396)
Q Consensus       129 ~~~~aLVV~sD~~-~--~~~~~~~~~------t-----~GaGA~Allv~~~~~~~~~~~~~~~~~~~~~df~rp~~~~~~  194 (396)
                      -.+++|..+|-.. +  .....|-|+      |     -|+||+  ++++++....+...+..   -+.|+=-   .+-.
T Consensus       129 ~A~~vla~tSSH~~tAErQFR~P~EyG~Qrp~tAqwTVTGaGa~--il~~~~~~p~It~~TiG---kVvD~Gi---~D~~  200 (336)
T PRK08304        129 FADRVLAATSSHFATAERQFRFPTEYGGQRPPTAQWTVTGAGAV--LLSKEGSGPKITYATIG---KVIDYGI---KDPL  200 (336)
T ss_pred             CHHHHHEECCCCCHHHHHHCCCCHHCCCCCCCCCCEEEECEEEE--EEECCCCCCEEEEEEEE---EEEECCC---CCCC
T ss_conf             36453100233420366551580320677998651788751799--98138999779898678---8876488---8843


Q ss_pred             EECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCCHHHHHHHHHHCCHHHHHHHH-------HHHHHHHHHH
Q ss_conf             356601698999999999999999629882110123311454057888886411024544100-------1345554333
Q gi|254781019|r  195 LVDGKYSTKIYLQSLEAVWHDYQKNKGHDFNDFQYFCYHQPFTRMAEKAHIRLSKIVHQNLSV-------AEIEKAIGIT  267 (396)
Q Consensus       195 ~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~~did~~v~H~p~~k~~~~~~~~l~~~~~~~~~~-------~~~e~~~~~~  267 (396)
                      .| |    .+-..+--..+.+.++..|.+++|+|.++-- --++..++....|++...-++..       ..+...-+..
T Consensus       201 nM-G----aAMAPAA~dTI~~hf~Dtg~~p~dYDlIvTG-DLg~vG~~i~~~Ll~e~g~~i~~~~~DCG~~iyd~e~Qdv  274 (336)
T PRK08304        201 DM-G----AAMAPAAADTIKQHFEDTGRTPEDYDLIVTG-DLGAVGREIAKELLKEEGYDISDNYNDCGVMIYDSEQQDV  274 (336)
T ss_pred             CC-H----HHHHHHHHHHHHHHHHHHCCCHHHCCEEEEC-CHHHHHHHHHHHHHHHCCCCHHHCCCCCCEEEECCCCCCC
T ss_conf             03-5----5553789999999999809990023489966-4588789999999998097855522756768763777765


Q ss_pred             HHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCE
Q ss_conf             4445323854323389999999971574369888999840798303
Q gi|254781019|r  268 TLYNRLIGNSYTASLYIALISLLDHSSENLAGKRVGFFSYGSGCVA  313 (396)
Q Consensus       268 ~~~~~~~GN~~SASi~l~L~slLe~~~~~~~G~rIll~syGsG~~a  313 (396)
                           ..|-.+.+.--..+.+.+-+.-+...=+|||+.+-|.=+.-
T Consensus       275 -----~aGGSGcgCSAvV~~g~il~~m~~g~~krvL~vaTGALlSp  315 (336)
T PRK08304        275 -----FAGGSGCACSAVVTYGYLYKELQKGKLKRVLVVATGALLSP  315 (336)
T ss_pred             -----CCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCHHCCC
T ss_conf             -----68876544478998999899986487317999974031382


No 112
>pfam07451 SpoVAD Stage V sporulation protein AD (SpoVAD). This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation.
Probab=98.04  E-value=0.00075  Score=42.95  Aligned_cols=236  Identities=19%  Similarity=0.144  Sum_probs=125.7

Q ss_pred             HHHHHHHHHHHHHHHCC--HHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCC
Q ss_conf             99999999999997279--5786899994578875460058888632026877358984142035888998789999739
Q gi|254781019|r   51 IVTMAAAAALPIMQNQD--KNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACALVAKS  128 (396)
Q Consensus        51 ~~tmA~~Aa~~~L~~~~--~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i~sg  128 (396)
                      -..|--+|++.+|++++  ++|||.++-+---.   ---.+++..+.|++    +-+-+-.||+-..-+|.+|.-+|..|
T Consensus        51 E~~m~~~A~~~al~Ka~l~~~dId~~~aGDLln---Q~i~ssf~ar~l~i----Pf~GlyGACST~~E~l~laa~~vd~g  123 (329)
T pfam07451        51 ESKMLEEAVKLALKKAGLKKDDIDYLLAGDLLN---QIISSSFAARTLGI----PFLGLYGACSTMMESLALAAMLVDGG  123 (329)
T ss_pred             HHHHHHHHHHHHHHHCCCCHHHCEEEEECHHHH---HHHHHHHHHHHCCC----CEEEHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             999999999999987499988864895012443---25777788986399----81211356677899999999998466


Q ss_pred             CCCEEEEEECCCCC---CCCCCCCCC------C-----CCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCE
Q ss_conf             99769995033201---458887533------4-----783024688426876303531000156786511275887542
Q gi|254781019|r  129 PERKVLIVASDVAR---YDLGSSGEP------T-----QGCGAVAILISSQTSILEIEDITGIYTNDCMDFWRPNYRRTA  194 (396)
Q Consensus       129 ~~~~aLVV~sD~~~---~~~~~~~~~------t-----~GaGA~Allv~~~~~~~~~~~~~~~~~~~~~df~rp~~~~~~  194 (396)
                      -.+++|..+|-...   .....|-|+      |     -|+||+  ++++......+...+..   -+.|+=-   .+-.
T Consensus       124 ~A~~vla~tSSH~~tAErQFR~P~EyG~QrpptAqWTVTGaGa~--il~~~~~~p~It~~TiG---kVvD~Gi---~Dp~  195 (329)
T pfam07451       124 FADYVLAATSSHFASAERQFRFPTEYGGQRPPTAQWTVTGAGAV--LLGKEGDGPRITSATIG---KVVDYGI---KDPN  195 (329)
T ss_pred             CHHHEEEEECCCCHHHHHHCCCCHHCCCCCCCCCCEEEECEEEE--EEECCCCCCEEEEEEEE---EEEECCC---CCCC
T ss_conf             54341343144520366542682211677998663788751899--99438998779898778---8876588---8843


Q ss_pred             EECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCCHHHHHHHHHHCCHHHHHHHH-------HHHHHHHHHH
Q ss_conf             356601698999999999999999629882110123311454057888886411024544100-------1345554333
Q gi|254781019|r  195 LVDGKYSTKIYLQSLEAVWHDYQKNKGHDFNDFQYFCYHQPFTRMAEKAHIRLSKIVHQNLSV-------AEIEKAIGIT  267 (396)
Q Consensus       195 ~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~~did~~v~H~p~~k~~~~~~~~l~~~~~~~~~~-------~~~e~~~~~~  267 (396)
                      .| |    .+-..+--..+...++..|.+++|+|.++-- --++..++....|+....-++..       ..+...-++.
T Consensus       196 nM-G----aAMAPAA~dTI~~hf~D~g~~p~dYDlIvTG-DLG~vG~~i~~~Ll~~~g~~i~~~~~DCG~~Iyd~~~Q~v  269 (329)
T pfam07451       196 NM-G----AAMAPAAADTIEQHFQDTGRDPSDYDLIVTG-DLGKVGREIAEDLLKEKGYDISENYQDCGLLIYDNEKQDV  269 (329)
T ss_pred             CC-H----HHHHHHHHHHHHHHHHHCCCCHHHCCEEEEC-CHHHHHHHHHHHHHHHCCCCHHHCCCCCCEEEECCCCCCC
T ss_conf             02-5----5564789999999999709992244479966-4488789999999998198844431766768664787765


Q ss_pred             HHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCC
Q ss_conf             444532385432338999999997157436988899984079830
Q gi|254781019|r  268 TLYNRLIGNSYTASLYIALISLLDHSSENLAGKRVGFFSYGSGCV  312 (396)
Q Consensus       268 ~~~~~~~GN~~SASi~l~L~slLe~~~~~~~G~rIll~syGsG~~  312 (396)
                           .-|-.+.+.--..+.+.|-+.-+...=+|||+.+-|.=+.
T Consensus       270 -----~aGGSGcgCSAvV~~g~il~~m~~g~~krvL~VaTGALlS  309 (329)
T pfam07451       270 -----HAGGSGCGCSAVVLYGYLLKKMKKGELKRVLFVATGALLS  309 (329)
T ss_pred             -----CCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCHHCC
T ss_conf             -----5787643368999999989999658721899997503138


No 113
>KOG1390 consensus
Probab=97.93  E-value=0.00079  Score=42.80  Aligned_cols=98  Identities=12%  Similarity=0.081  Sum_probs=76.3

Q ss_pred             CCCHHHHHHHHHHHHHHHCC--HHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHH
Q ss_conf             85999999999999997279--5786899994578875460058888632026877358984142035888998789999
Q gi|254781019|r   48 DEDIVTMAAAAALPIMQNQD--KNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACALV  125 (396)
Q Consensus        48 ~Ed~~tmA~~Aa~~~L~~~~--~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i  125 (396)
                      .-.+..|+.-|.+.+|+++.  +++++-+|++-.-.-...-..+-+..=--||+.++.|.-++-.|.+++-|+.+|..-|
T Consensus        27 sl~A~~Lgsvaikaalera~~~~~~v~eVi~GnVl~AnlGQapaRQaalgAGlp~sv~~tTvNkvCaSgmKAv~laaQsI  106 (396)
T KOG1390          27 SLTATELGSVAIKAALERAVVPPSDVAEVIFGNVLSANLGQAPARQAALGAGLPYSVPATTVNKVCASGMKAVILAAQSI  106 (396)
T ss_pred             CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHH
T ss_conf             57625677899999998537987884555410301266676667777762699852146762366665689999998898


Q ss_pred             HCCCCCEEEEEECCCCCCCC
Q ss_conf             73999769995033201458
Q gi|254781019|r  126 AKSPERKVLIVASDVARYDL  145 (396)
Q Consensus       126 ~sg~~~~aLVV~sD~~~~~~  145 (396)
                      ..|....++.-+.|-++..+
T Consensus       107 ~~G~~divVaGGmEsMS~vP  126 (396)
T KOG1390         107 QTGHADIVVAGGMESMSNVP  126 (396)
T ss_pred             HCCCCCEEEECCCCHHCCCC
T ss_conf             33876579862502001385


No 114
>pfam00109 ketoacyl-synt Beta-ketoacyl synthase, N-terminal domain. The structure of beta-ketoacyl synthase is similar to that of the thiolase family (pfam00108) and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. The N-terminal domain contains most of the structures involved in dimer formation and also the active site cysteine.
Probab=97.92  E-value=0.00013  Score=47.66  Aligned_cols=87  Identities=22%  Similarity=0.224  Sum_probs=65.3

Q ss_pred             HHHHHHHHHHHHHCC--HHHCC-----EEEEECCCCCC----------------------CCH-HHHHHHHHHHCCCCCC
Q ss_conf             999999999997279--57868-----99994578875----------------------460-0588886320268773
Q gi|254781019|r   53 TMAAAAALPIMQNQD--KNLID-----TLFFATESSVD----------------------QSK-SAAIWLHKLLGLNSSC  102 (396)
Q Consensus        53 tmA~~Aa~~~L~~~~--~~~Id-----~li~~T~t~~~----------------------~~~-~~a~~v~~~Lgl~~~~  102 (396)
                      -+++.|+++||++++  ++.+.     .++++|..+..                      ..+ ..+.+|...+|+... 
T Consensus        78 ~~~~~aa~~Al~dAGl~~~~~~~~~~~gv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~g~~Gp-  156 (243)
T pfam00109        78 RLALEAAWEALEDAGLDPASLRGSDRTGVFVGSGSGDYAELQALDSAGGPRRGSPYLTGAWMPSVAAGRISYRLGLRGP-  156 (243)
T ss_pred             HHHHHHHHHHHHHCCCCHHHCCCCCCEEEEEEECCCCHHHHHHHHCCCCCCCCCCEEECCCCCCHHHHHHHHHHCCCCC-
T ss_conf             9999999999998499846727887289999864764899997630367433464110564511788899867415798-


Q ss_pred             EEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC
Q ss_conf             589841420358889987899997399976999503320
Q gi|254781019|r  103 RVVELKQACYSATCALHMACALVAKSPERKVLIVASDVA  141 (396)
Q Consensus       103 ~~~Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~  141 (396)
                       ++-+..||.+++.||..|..+|++|....+|+.++|..
T Consensus       157 -~~t~~~ACaSg~~AI~~A~~~I~~G~~d~~i~Gg~~~~  194 (243)
T pfam00109       157 -SVTVDTACSSSLVALHAAVRSIRRGECDLALAGGVEAP  194 (243)
T ss_pred             -CCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECC
T ss_conf             -64665520789999999997533698387999784155


No 115
>PRK12404 stage V sporulation protein AD; Provisional
Probab=97.89  E-value=0.002  Score=40.25  Aligned_cols=235  Identities=12%  Similarity=0.079  Sum_probs=126.3

Q ss_pred             HHHHHHHHHHHHHHHCC--HHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCC
Q ss_conf             99999999999997279--5786899994578875460058888632026877358984142035888998789999739
Q gi|254781019|r   51 IVTMAAAAALPIMQNQD--KNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACALVAKS  128 (396)
Q Consensus        51 ~~tmA~~Aa~~~L~~~~--~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i~sg  128 (396)
                      -..|--+|++.+|++++  ++|||.++-+---.   ---.+++..+.|++    +-+-+-.||+-..-+|.+|.-+|.+|
T Consensus        54 E~~m~~~A~~~al~Ka~l~~~dId~~~aGDLln---Q~i~ssf~ar~l~i----Pf~GlyGACST~~E~L~laa~~vd~g  126 (334)
T PRK12404         54 HKKLFEEACSRATEKAKLRKDDIQFVLAGDLIN---QITPTSFAARTLGT----PYLGLFGACSTSMEGLALGASIVNAK  126 (334)
T ss_pred             HHHHHHHHHHHHHHHCCCCHHHCEEEEECHHHH---HHHHHHHHHHHCCC----CEEEHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             999999999999987499978864896122443---25787788986499----80111356677899999999998466


Q ss_pred             CCCEEEEEECCCCC---CCCCCCCCC------C-----CCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCE
Q ss_conf             99769995033201---458887533------4-----783024688426876303531000156786511275887542
Q gi|254781019|r  129 PERKVLIVASDVAR---YDLGSSGEP------T-----QGCGAVAILISSQTSILEIEDITGIYTNDCMDFWRPNYRRTA  194 (396)
Q Consensus       129 ~~~~aLVV~sD~~~---~~~~~~~~~------t-----~GaGA~Allv~~~~~~~~~~~~~~~~~~~~~df~rp~~~~~~  194 (396)
                      -.+++|..+|-...   .....|-|+      |     -|+||+  ++++......+...+.   --+.|+=-   .+-.
T Consensus       127 ~A~~vla~tSSH~~tAErQFR~P~EyG~QrpptAqWTVTGaGa~--il~~~~~~p~It~~Ti---GkVvD~Gi---~D~~  198 (334)
T PRK12404        127 GAKYLLTGASSHNTAVEKQFRYPTEYGGQKPPTAQWTVTGAGAA--ILSKTGHGPRVTSATI---GRVVDMGL---TDPF  198 (334)
T ss_pred             CHHHEEEEECCCCHHHHHHCCCCHHCCCCCCCCCCEEEECEEEE--EEECCCCCCEEEEEEE---EEEEECCC---CCCC
T ss_conf             54350232044520366542582211677998662788761899--9943899977989877---88876588---8843


Q ss_pred             EECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHH--------HHHHHHHH
Q ss_conf             3566016989999999999999996298821101233114540578888864110245441001--------34555433
Q gi|254781019|r  195 LVDGKYSTKIYLQSLEAVWHDYQKNKGHDFNDFQYFCYHQPFTRMAEKAHIRLSKIVHQNLSVA--------EIEKAIGI  266 (396)
Q Consensus       195 ~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~~did~~v~H~p~~k~~~~~~~~l~~~~~~~~~~~--------~~e~~~~~  266 (396)
                      .| |    .+-..+-...+...++..|.+++|+|.++-- --++..++....|+..-.-++...        .+.+. ++
T Consensus       199 nM-G----aAMAPAA~dTI~~hf~D~g~~p~dYDlI~TG-DLG~vG~~i~~~Ll~~~g~~i~~~~~~DCG~~Iy~~~-Q~  271 (334)
T PRK12404        199 NM-G----GAMAPAAVDTIEAHLRDRQIDASYYDLIVTG-DLGHVGREIAYDLLHKHGTKVTSEQFQDCGLLIYREG-QP  271 (334)
T ss_pred             CC-H----HHHHHHHHHHHHHHHHHCCCCHHHCCEEEEC-CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCC-CC
T ss_conf             02-5----5554789999999999709992344579966-4388789999999998198887455376674634689-87


Q ss_pred             HHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCC
Q ss_conf             3444532385432338999999997157436988899984079830
Q gi|254781019|r  267 TTLYNRLIGNSYTASLYIALISLLDHSSENLAGKRVGFFSYGSGCV  312 (396)
Q Consensus       267 ~~~~~~~~GN~~SASi~l~L~slLe~~~~~~~G~rIll~syGsG~~  312 (396)
                      .     .-|-.+.+.--..+.+.+-+.-+...=+|||+.+-|.=+.
T Consensus       272 v-----~aGGSGcgCSA~V~~g~il~~m~~g~~krvL~VaTGALlS  312 (334)
T PRK12404        272 V-----IAGASGPGCSATVVYGHLLNRMKRGELKKILVVATGALLS  312 (334)
T ss_pred             C-----CCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCHHCC
T ss_conf             5-----6887653368999999999999648730899997503138


No 116
>COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism]
Probab=97.70  E-value=0.00049  Score=44.12  Aligned_cols=96  Identities=19%  Similarity=0.157  Sum_probs=74.3

Q ss_pred             HHHHHHHHHHHHHH----HCCHHHCCEEEEECCCCCC-CCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHH
Q ss_conf             99999999999997----2795786899994578875-460058888632026877358984142035888998789999
Q gi|254781019|r   51 IVTMAAAAALPIMQ----NQDKNLIDTLFFATESSVD-QSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACALV  125 (396)
Q Consensus        51 ~~tmA~~Aa~~~L~----~~~~~~Id~li~~T~t~~~-~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i  125 (396)
                      ...++....+..++    +.++.+|+-+++++..+.. ...-.+-++...+|++.+.+++.++.+|.++..|+..|+..|
T Consensus        27 ~e~l~~a~~~a~~~~~~~~vd~~~v~~vi~G~~~~~g~~~~~~ar~~a~~aGl~~~~p~~~V~~~c~SG~~Av~~A~~~I  106 (392)
T COG0183          27 AEALGAALIDAGLERAPADVDAADVDDVILGCVLQAGEQGQNIARQAALAAGLPGSVPAVTVNRACASGLAAVRLAAQAI  106 (392)
T ss_pred             HHHHHHHHHHHHHHHCCCCCCHHHHHHEEECCCCCHHHCCCCHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHH
T ss_conf             99999999997644222049855410214401341100335388999998599989870899645711999999999999


Q ss_pred             HCCCCCEEEEEECCCCCCCCC
Q ss_conf             739997699950332014588
Q gi|254781019|r  126 AKSPERKVLIVASDVARYDLG  146 (396)
Q Consensus       126 ~sg~~~~aLVV~sD~~~~~~~  146 (396)
                      ++|....+|+++.|.++..+.
T Consensus       107 ~sG~~dvvlagG~E~mS~~~~  127 (392)
T COG0183         107 ASGEADVVLAGGVEKMSDAPM  127 (392)
T ss_pred             HCCCCCEEEEEEECCCCCCCC
T ss_conf             779988899985611456876


No 117
>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.65  E-value=0.0031  Score=39.12  Aligned_cols=172  Identities=18%  Similarity=0.224  Sum_probs=104.4

Q ss_pred             HHHHHHHHHHHHCC--HHHCC----EEEEECCCCCCCCHH-------------------HHHHHHHHHCCCCCCEEEEEC
Q ss_conf             99999999997279--57868----999945788754600-------------------588886320268773589841
Q gi|254781019|r   54 MAAAAALPIMQNQD--KNLID----TLFFATESSVDQSKS-------------------AAIWLHKLLGLNSSCRVVELK  108 (396)
Q Consensus        54 mA~~Aa~~~L~~~~--~~~Id----~li~~T~t~~~~~~~-------------------~a~~v~~~Lgl~~~~~~~Di~  108 (396)
                      |-.+.+-++|++++  |..+.    -|+.+..+..|....                   ++..|...|++..  +.+.+.
T Consensus        94 llLe~aw~AlEdAG~~~~~l~g~~tgV~~g~~~~~y~~~~~~~~~~~~~~~~~g~~~~~~a~Risy~l~l~G--Ps~~vd  171 (1061)
T COG3321          94 LLLEVAWEALEDAGIYPDSLRGSATGVFAGASVADYLLLLLADDEAEPEYAITGNSSSVAAGRISYVLGLSG--PSVTVD  171 (1061)
T ss_pred             HHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHCCCHHEEECCC--CCCCCC
T ss_conf             999999999997599922256742489965656664442322212355221025422021010122043457--854222


Q ss_pred             CCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC-----CC---------------C-CCCCCCCCCCCEEEEEECCC--
Q ss_conf             4203588899878999973999769995033201-----45---------------8-88753347830246884268--
Q gi|254781019|r  109 QACYSATCALHMACALVAKSPERKVLIVASDVAR-----YD---------------L-GSSGEPTQGCGAVAILISSQ--  165 (396)
Q Consensus       109 ~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~-----~~---------------~-~~~~~~t~GaGA~Allv~~~--  165 (396)
                      .+|++...|+++|+..+++|...-+|+=+....-     +.               + .+++=+..|.|+.++++.+-  
T Consensus       172 taCSSsLvAvhlA~~sL~~Ge~d~alaGgv~l~~~p~~~~~~~~~g~ls~~g~c~~fd~~adG~v~geG~g~vvLKrl~~  251 (1061)
T COG3321         172 TACSSSLVAVHLACQSLRLGECDLALAGGVNLVLSPESSYLFSAGGMLSPDGRCKAFDADADGYVRGEGAGVVVLKRLSD  251 (1061)
T ss_pred             CHHHHHHHHHHHHHHHHHCCCCCHHHCCCEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEHHH
T ss_conf             36767899999999987548720132022210358604443443035586677578755578668721468998625887


Q ss_pred             -----CCCCEEEECCCCCCCC-CCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCCHH
Q ss_conf             -----7630353100015678-6511275887542356601698999999999999999629882110123311454057
Q gi|254781019|r  166 -----TSILEIEDITGIYTND-CMDFWRPNYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHDFNDFQYFCYHQPFTRM  239 (396)
Q Consensus       166 -----~~~~~~~~~~~~~~~~-~~df~rp~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~~did~~v~H~p~~k~  239 (396)
                           +++......++..... ...+..|+                .+.-...+++.+++.++++++|+|+=-|..+..+
T Consensus       252 A~~dgd~IyavI~gsavn~dG~~~gltaP~----------------~~aQ~~v~~~al~~a~i~p~tv~yvEaHgTGT~l  315 (1061)
T COG3321         252 AERDGDRIYAVIRGSAVNQDGRSNGLTAPN----------------LEAQADVIREALADAGIDPATVQYVEAHGTGTPL  315 (1061)
T ss_pred             HHHCCCEEEEEEEEEEEECCCCCCCCCCCC----------------HHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCC
T ss_conf             875799179999502550577656744788----------------8899999999998559990335167611477656


Q ss_pred             HHHH
Q ss_conf             8888
Q gi|254781019|r  240 AEKA  243 (396)
Q Consensus       240 ~~~~  243 (396)
                      ..-.
T Consensus       316 GDpi  319 (1061)
T COG3321         316 GDPI  319 (1061)
T ss_pred             CCHH
T ss_conf             4789


No 118
>KOG1394 consensus
Probab=97.31  E-value=0.0039  Score=38.52  Aligned_cols=178  Identities=17%  Similarity=0.167  Sum_probs=104.8

Q ss_pred             HHHHHHHHHHHHHHHCCH-----HHCCE----EEEECCCCC---------------------CCCHH-----HHHHHHHH
Q ss_conf             999999999999972795-----78689----999457887---------------------54600-----58888632
Q gi|254781019|r   51 IVTMAAAAALPIMQNQDK-----NLIDT----LFFATESSV---------------------DQSKS-----AAIWLHKL   95 (396)
Q Consensus        51 ~~tmA~~Aa~~~L~~~~~-----~~Id~----li~~T~t~~---------------------~~~~~-----~a~~v~~~   95 (396)
                      ..-+|+.|++++|++++.     ++.|.    +.++|.-+.                     ++.|-     .+.+|.-.
T Consensus        94 ~~~~al~aa~eAL~da~~~~~~~~e~dk~~~GV~iGtgmg~l~~i~e~a~~~~~~g~rrvsPffVPkil~NM~ag~vsm~  173 (440)
T KOG1394          94 FTKLALTAAEEALKDAGLLDVNLSEEDKEKTGVLIGTGMGDLEDIYETAQNLSEKGYRRVSPFFVPKILTNMAAGYVSMK  173 (440)
T ss_pred             HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCHHHHH
T ss_conf             89999999999997368888641245544104585146332999999999998722343386300066503651033453


Q ss_pred             HCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC---------------CCCC---CC-------
Q ss_conf             0268773589841420358889987899997399976999503320145---------------8887---53-------
Q gi|254781019|r   96 LGLNSSCRVVELKQACYSATCALHMACALVAKSPERKVLIVASDVARYD---------------LGSS---GE-------  150 (396)
Q Consensus        96 Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~---------------~~~~---~~-------  150 (396)
                      +|+..  +...++-||.-+..++-.|..+|+.|.....|.=++|.+--.               -+++   .|       
T Consensus       174 ~gl~G--pnhsvSTACATg~h~igda~n~Ir~GdaDvmlAGgsE~~I~PlslaGF~r~RALSt~nd~P~~aSRPfD~~Rd  251 (440)
T KOG1394         174 YGLRG--PNHSVSTACATGNHCIGDAFNFIRLGDADVMLAGGSEACINPLSLAGFSRARALSTRNDNPQKASRPFDKKRD  251 (440)
T ss_pred             HCCCC--CCHHHHHHHHHCCCHHHHHHHHHHHCCCCEEECCCCCEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
T ss_conf             15767--7616676665143058888878870765455226753000522234378877764158993103788866777


Q ss_pred             -CCCCCCEEEEEECC-------CCCCCEEEECCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             -34783024688426-------8763035310001567865112758875423566016989999999999999996298
Q gi|254781019|r  151 -PTQGCGAVAILISS-------QTSILEIEDITGIYTNDCMDFWRPNYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGH  222 (396)
Q Consensus       151 -~t~GaGA~Allv~~-------~~~~~~~~~~~~~~~~~~~df~rp~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~  222 (396)
                       |-.|-||.+++++.       .+.|.+.....+. +.|.+..--|.      -||.        ....|+++.++.+|+
T Consensus       252 GFVmGEGagvlvlEelEHA~~RgA~I~AE~lGygl-s~Da~HiT~P~------~dG~--------Ga~~am~raL~~Agl  316 (440)
T KOG1394         252 GFVMGEGAGVLVLEELEHAKKRGAPIYAEVLGYGL-SSDAYHITSPD------PDGA--------GAVLAMERALKDAGL  316 (440)
T ss_pred             CEEECCCEEEEEHHHHHHHHHCCCCEEHHHHCCCC-CCCCCCCCCCC------CCCC--------HHHHHHHHHHHHCCC
T ss_conf             35650660587618678898749915277645752-56634347899------8730--------589999999987499


Q ss_pred             CHHHCCEEEECCCCCHHHHHHHH
Q ss_conf             82110123311454057888886
Q gi|254781019|r  223 DFNDFQYFCYHQPFTRMAEKAHI  245 (396)
Q Consensus       223 ~~~did~~v~H~p~~k~~~~~~~  245 (396)
                      +++||+|+--|..+..+.+.+..
T Consensus       317 ~pe~i~YvNAHATST~~GD~aE~  339 (440)
T KOG1394         317 SPEDIDYVNAHATSTPLGDAAEA  339 (440)
T ss_pred             CHHHCCEEECCCCCCCCCHHHHH
T ss_conf             95655705303335767308999


No 119
>KOG1389 consensus
Probab=97.21  E-value=0.014  Score=35.12  Aligned_cols=92  Identities=14%  Similarity=0.131  Sum_probs=70.8

Q ss_pred             HHHHHHHHHHHHHHH--CCHHHCCEEEEECCCCCCCCHHHHHHHHHHH-CCCCCCEEEEECCCHHHHHHHHHHHHHHHHC
Q ss_conf             999999999999972--7957868999945788754600588886320-2687735898414203588899878999973
Q gi|254781019|r   51 IVTMAAAAALPIMQN--QDKNLIDTLFFATESSVDQSKSAAIWLHKLL-GLNSSCRVVELKQACYSATCALHMACALVAK  127 (396)
Q Consensus        51 ~~tmA~~Aa~~~L~~--~~~~~Id~li~~T~t~~~~~~~~a~~v~~~L-gl~~~~~~~Di~~aC~g~~~AL~~A~~~i~s  127 (396)
                      +-.|-..+.+..+++  .+|+.|+-++++|.-.+.. -.+.+.+...+ |.+...+..-++-.|++|+.|......-|++
T Consensus        61 pDeLl~~vl~a~ie~t~~dp~~igdi~vG~vL~pg~-ga~e~R~a~~~ag~P~tvpv~tvNRqCsSGLqaVadiA~~Ir~  139 (435)
T KOG1389          61 PDELLAAVLRAVIEKTNLDPSLIGDIVVGTVLAPGS-GASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADIAAKIRA  139 (435)
T ss_pred             HHHHHHHHHHHHHHHCCCCHHHHCCEEEEECCCCCC-CHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             289999999999765189978950135521037775-3689889999718986560256643421477899999988744


Q ss_pred             CCCCEEEEEECCCCCC
Q ss_conf             9997699950332014
Q gi|254781019|r  128 SPERKVLIVASDVARY  143 (396)
Q Consensus       128 g~~~~aLVV~sD~~~~  143 (396)
                      |.+.-.|-.+-|.++.
T Consensus       140 G~ydIGla~GvESMt~  155 (435)
T KOG1389         140 GFYDIGLAAGVESMTT  155 (435)
T ss_pred             CCEEEECCCCHHHHCC
T ss_conf             8366300135112103


No 120
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=97.03  E-value=0.015  Score=34.77  Aligned_cols=106  Identities=22%  Similarity=0.219  Sum_probs=76.4

Q ss_pred             HHHCCCCEEEECCCCC--CHHHHHHHHHHHHHHHCC---HHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEEC
Q ss_conf             6303832466559985--999999999999997279---57868999945788754600588886320268773589841
Q gi|254781019|r   34 YVGIGQERMSVLNPDE--DIVTMAAAAALPIMQNQD---KNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELK  108 (396)
Q Consensus        34 ~~~lGi~~r~v~~~~E--d~~tmA~~Aa~~~L~~~~---~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~  108 (396)
                      ..|.||-..+.-++++  .++.|..+|++.|+++++   .+.||.|.+.-.-. ...+-..-.|+++||+.+. .++-..
T Consensus        10 IVGvGqi~qr~~d~~~~~ePl~Lm~~A~~~A~~DaG~~l~~~IDsI~VVr~~s-w~y~np~~~lA~rLG~~pa-~~~~t~   87 (502)
T PRK08257         10 IVGVGQVTDRPDDPARGLEPVDLMAAAARAAAADAGADLLEAIDSVAVVNQLS-WRYRNPPGLLAERLGADPA-RTVYGP   87 (502)
T ss_pred             EEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHCCEEEEECCCC-CCCCCHHHHHHHHCCCCCC-CEEEEC
T ss_conf             99523103168872014799999999999999860820587597898513225-6479989999997399977-579836


Q ss_pred             CCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC
Q ss_conf             420358889987899997399976999503320
Q gi|254781019|r  109 QACYSATCALHMACALVAKSPERKVLIVASDVA  141 (396)
Q Consensus       109 ~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~  141 (396)
                      .+-..=-.-+.-+..-|.+|..+-+||+++|..
T Consensus        88 ~GGn~PQ~LVneaa~rIa~Ge~~~aLI~GgEA~  120 (502)
T PRK08257         88 VGGNSPQRLVNEAALRIARGEADVVLVAGAEAQ  120 (502)
T ss_pred             CCCCCHHHHHHHHHHHHHCCCCCEEEEECHHHH
T ss_conf             998368999999999997688547999744069


No 121
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=96.87  E-value=0.034  Score=32.61  Aligned_cols=160  Identities=14%  Similarity=0.028  Sum_probs=92.9

Q ss_pred             HHHHHHHHHHHHHHCCH-------HHCCEEEEECCCC-----------------CCC------------CH---------
Q ss_conf             99999999999972795-------7868999945788-----------------754------------60---------
Q gi|254781019|r   52 VTMAAAAALPIMQNQDK-------NLIDTLFFATESS-----------------VDQ------------SK---------   86 (396)
Q Consensus        52 ~tmA~~Aa~~~L~~~~~-------~~Id~li~~T~t~-----------------~~~------------~~---------   86 (396)
                      ..|++.|++.+|++++.       +.++++ +++..+                 .+.            .|         
T Consensus        74 ~~~a~~AA~~Al~dAGl~~~~~~~~~~gv~-vgsg~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~P~~~~~~l~n  152 (397)
T PRK06519         74 QRLGTYAAGLALDDAGIKGNEEICSTMDMI-VAAGGGERDIAVDTAILNEARKGNDRGGLLNERLMTELRPTLFLAQLSN  152 (397)
T ss_pred             HHHHHHHHHHHHHHCCCCCCCCCCCCCCEE-EEECCCCCCEEEEEEEECCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHH
T ss_conf             999999999999967999870010465679-9953666530442221024443345620333214566782688988776


Q ss_pred             HHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC---------------CCCCC---
Q ss_conf             058888632026877358984142035888998789999739997699950332014---------------58887---
Q gi|254781019|r   87 SAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACALVAKSPERKVLIVASDVARY---------------DLGSS---  148 (396)
Q Consensus        87 ~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~---------------~~~~~---  148 (396)
                      ..+..|.-.+|+...  .+-+..||.+++.|+-.|..+|+.|....+|+-++|-+..               ....+   
T Consensus       153 ~~a~~isi~~g~~Gp--~~tv~tACASg~~AIg~A~~~Ir~G~aDv~iaGGae~~~~p~~~~~~~~~~~~s~~~~~P~~a  230 (397)
T PRK06519        153 LLAGNISIVHKVTGS--SRTFMGEEGAGVSAIRIALARIASGQSTHALVGGAYNAERKDMLLLYELGGLLLKDGWAPVWS  230 (397)
T ss_pred             HHHHHHHHHHCCCCC--CCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf             289999998378876--654026038899999999999977998889986201333728999999733434799992224


Q ss_pred             ----CC--CCCCCCEEEEEECCC-------CCCCEEEECCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHH
Q ss_conf             ----53--347830246884268-------76303531000156786511275887542356601698999999999999
Q gi|254781019|r  149 ----GE--PTQGCGAVAILISSQ-------TSILEIEDITGIYTNDCMDFWRPNYRRTALVDGKYSTKIYLQSLEAVWHD  215 (396)
Q Consensus       149 ----~~--~t~GaGA~Allv~~~-------~~~~~~~~~~~~~~~~~~df~rp~~~~~~~~dg~~~~~~y~~~~~~a~~~  215 (396)
                          ++  +-.|-||+.+++++.       .++......++.   +   .       .+..+|.         +..+.+.
T Consensus       231 ~~~~dR~GfVlGEGAa~LVLE~~ehA~aRGA~IyaEi~G~g~---~---~-------~~~~~g~---------~~~~~~~  288 (397)
T PRK06519        231 RKGSAGGGFILGSGGAFLVLESREHAEARGARPYARLSGVVS---D---R-------ARRSPGD---------VEASLER  288 (397)
T ss_pred             CCCCCCCCEEECCCEEEEEECCHHHHHHCCCEEEEEEEEEEC---C---C-------CCCCCCH---------HHHHHHH
T ss_conf             897567973541663899973587898589926899976405---8---8-------8999808---------9999999


Q ss_pred             HHHHCCCCHHHCCEEEECCCCC
Q ss_conf             9996298821101233114540
Q gi|254781019|r  216 YQKNKGHDFNDFQYFCYHQPFT  237 (396)
Q Consensus       216 ~l~~~g~~~~did~~v~H~p~~  237 (396)
                      .++..++..++ ++++-|..+.
T Consensus       289 al~~ag~~~~~-~~~~~~~tgt  309 (397)
T PRK06519        289 LWSAAGGLAAP-TAVISGATGA  309 (397)
T ss_pred             HHHHCCCCCCC-EEEECCCCCC
T ss_conf             99867999757-4898489888


No 122
>KOG1406 consensus
Probab=96.54  E-value=0.0086  Score=36.35  Aligned_cols=91  Identities=15%  Similarity=0.210  Sum_probs=66.1

Q ss_pred             CCCHHHHHHHHHHHHHHHCCH--HHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHH
Q ss_conf             859999999999999972795--786899994578875460058888632026877358984142035888998789999
Q gi|254781019|r   48 DEDIVTMAAAAALPIMQNQDK--NLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACALV  125 (396)
Q Consensus        48 ~Ed~~tmA~~Aa~~~L~~~~~--~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i  125 (396)
                      +-|--+|+-+|..++|++++.  ++|+--.++-.-++-.--.-|.|   .+|+. .++.+.++++|..+..||.+|...|
T Consensus        26 ~~dypd~a~ea~tkal~da~ikys~vqqa~vgyvfgdstcgqraiy---evgmt-gipi~nvnnncatgssalflakqii  101 (408)
T KOG1406          26 DWDYPDFAKEAITKALQDAGIKYSEVQQAVVGYVFGDSTCGQRAIY---EVGMT-GIPIYNVNNNCATGSSALFLAKQII  101 (408)
T ss_pred             CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHEEEECCCCCCHHHHH---HCCCC-CCCEEECCCCCCCCCHHHHHHHHHH
T ss_conf             8867078999999888862997799876641245258753067888---70466-7624623675356704889999998


Q ss_pred             HCCCCCEEEEEECCCCC
Q ss_conf             73999769995033201
Q gi|254781019|r  126 AKSPERKVLIVASDVAR  142 (396)
Q Consensus       126 ~sg~~~~aLVV~sD~~~  142 (396)
                      ++|...-+|..+=|.+.
T Consensus       102 esgn~dcvlalgfekm~  118 (408)
T KOG1406         102 ESGNSDCVLALGFEKME  118 (408)
T ss_pred             HCCCCCEEEEECHHHCC
T ss_conf             65775358761302307


No 123
>KOG1202 consensus
Probab=95.66  E-value=0.051  Score=31.56  Aligned_cols=179  Identities=14%  Similarity=0.157  Sum_probs=100.2

Q ss_pred             HHHHHHHHHHHHHHHCC--HHHCCE----EEE---ECCCCCCC--CHHH-HHH-----HHHHHCCCCCCEEEE-------
Q ss_conf             99999999999997279--578689----999---45788754--6005-888-----863202687735898-------
Q gi|254781019|r   51 IVTMAAAAALPIMQNQD--KNLIDT----LFF---ATESSVDQ--SKSA-AIW-----LHKLLGLNSSCRVVE-------  106 (396)
Q Consensus        51 ~~tmA~~Aa~~~L~~~~--~~~Id~----li~---~T~t~~~~--~~~~-a~~-----v~~~Lgl~~~~~~~D-------  106 (396)
                      -+-|-.++...++-+++  |+++.-    +.+   ++||.-..  .|.+ ..|     +-.++ .++-..+||       
T Consensus        87 ~lRlLLE~t~EAivDaGiNP~dLRGsrTGV~vG~S~sETs~~l~~d~dtv~GY~ltGC~RaMf-aNRiSytFDf~GPSfs  165 (2376)
T KOG1202          87 QLRLLLEATWEAIVDAGINPDDLRGSRTGVFVGVSGSETSGALSQDPDTVNGYSMTGCVRAMF-ANRISYTFDFQGPSFS  165 (2376)
T ss_pred             HHHHHHHHHHHHHHHCCCCHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEHHHHHHHH-HCCEEEEEECCCCCEE
T ss_conf             999999988999983688866637644317997355434432247986003310147789986-3340589953688345


Q ss_pred             ECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCC-----------------CCCCCCCCC----CCEEEEEECCC
Q ss_conf             414203588899878999973999769995033201458-----------------887533478----30246884268
Q gi|254781019|r  107 LKQACYSATCALHMACALVAKSPERKVLIVASDVARYDL-----------------GSSGEPTQG----CGAVAILISSQ  165 (396)
Q Consensus       107 i~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~~-----------------~~~~~~t~G----aGA~Allv~~~  165 (396)
                      +..||++.+.||++|.+-|++|+...+||-++.......                 ...++...|    +|.+|+++.+.
T Consensus       166 vDTACSSSL~ALq~A~~~ir~Gqcd~AiVaG~~liLkPt~slQFlRLgmls~dGsCkaFDeagnGY~Rseg~~avllqrk  245 (2376)
T KOG1202         166 VDTACSSSLMALQNAFQDIRSGQCDAAIVAGANLILKPTTSLQFLRLGMLSPDGSCKAFDEAGNGYCRSEGVVAVLLQRK  245 (2376)
T ss_pred             EECHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCEEECCCHHHHHHHHCCCCCCCCCCCHHCCCCCEEECCCEEEEEEEHH
T ss_conf             51245688999999999986468846641056257544145677874375889861001003782351275699987445


Q ss_pred             CCCCEEEECCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCCHHHH
Q ss_conf             7630353100015678651127588754235660169899999999999999962988211012331145405788
Q gi|254781019|r  166 TSILEIEDITGIYTNDCMDFWRPNYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHDFNDFQYFCYHQPFTRMAE  241 (396)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~df~rp~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~~did~~v~H~p~~k~~~  241 (396)
                      ......- .+..+..--.|-++..+-.||.-+          .-.+.+++.-.+.|+.++++-|+=-|-.+.|..+
T Consensus       246 ~~ArRvY-AtilnartNTDGfKEqGvTfP~G~----------~Q~qLi~e~Yse~Gl~P~sv~YvEAHGtGTkVGD  310 (2376)
T KOG1202         246 SLARRVY-ATILNARTNTDGFKEQGVTFPSGD----------MQEQLIRETYSEAGLNPESVVYVEAHGTGTKVGD  310 (2376)
T ss_pred             HHHHHHH-HHHHCCCCCCCCHHHCCCCCCCCH----------HHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCC
T ss_conf             7787888-875204557874221386578807----------9999999999861989232799972167787799


No 124
>KOG1391 consensus
Probab=94.89  E-value=0.083  Score=30.23  Aligned_cols=94  Identities=14%  Similarity=0.183  Sum_probs=71.7

Q ss_pred             CCHHHHHHHHHHHHHHHC--CHHHCCEEEEECCCCCCCCHHHHHHHHHHHCC----CCCCEEEEECCCHHHHHHHHHHHH
Q ss_conf             599999999999999727--95786899994578875460058888632026----877358984142035888998789
Q gi|254781019|r   49 EDIVTMAAAAALPIMQNQ--DKNLIDTLFFATESSVDQSKSAAIWLHKLLGL----NSSCRVVELKQACYSATCALHMAC  122 (396)
Q Consensus        49 Ed~~tmA~~Aa~~~L~~~--~~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl----~~~~~~~Di~~aC~g~~~AL~~A~  122 (396)
                      -..-+|.+.|++.+|+.+  +++.+|.+|++-.-   .+-+-..|+.+..||    +.+.+++-++--|.++..++.++.
T Consensus        26 ~~aTdL~~~AakAAL~aa~v~~e~VD~VI~GNV~---aSSsDgIYl~RHvGL~~GvP~e~pALtiNRLCGSGFQsiVNga  102 (396)
T KOG1391          26 LSATDLGVVAAKAALKAANVGAEAVDHVIMGNVL---ASSSDGIYLARHVGLRVGVPKETPALTINRLCGSGFQSIVNGA  102 (396)
T ss_pred             CCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEEEE---ECCCCCEEEEECCCCCCCCCCCCCCEEEHHHHCCCHHHHHHHH
T ss_conf             5444678899998886438883233258871134---1257726754003532278676673343013131279898667


Q ss_pred             HHHHCCCCCEEEEEECCCCCCCC
Q ss_conf             99973999769995033201458
Q gi|254781019|r  123 ALVAKSPERKVLIVASDVARYDL  145 (396)
Q Consensus       123 ~~i~sg~~~~aLVV~sD~~~~~~  145 (396)
                      .-|.-+..+-+|.=++|.++..+
T Consensus       103 Q~I~vgea~ivL~GGtEnMSq~P  125 (396)
T KOG1391         103 QEICVGEAEIVLCGGTENMSQAP  125 (396)
T ss_pred             HHHHCCCCEEEEECCCCCCCCCC
T ss_conf             77630761599844745234586


No 125
>KOG1392 consensus
Probab=92.93  E-value=0.17  Score=28.31  Aligned_cols=91  Identities=15%  Similarity=0.173  Sum_probs=62.7

Q ss_pred             CCHHHHHHHHHHHHHHHC--CHHHCCEEEEECCCCCCCCHHHHHHHHHH-HCCCCCCEEEEECCCHHHHHHHHHHHHHHH
Q ss_conf             599999999999999727--95786899994578875460058888632-026877358984142035888998789999
Q gi|254781019|r   49 EDIVTMAAAAALPIMQNQ--DKNLIDTLFFATESSVDQSKSAAIWLHKL-LGLNSSCRVVELKQACYSATCALHMACALV  125 (396)
Q Consensus        49 Ed~~tmA~~Aa~~~L~~~--~~~~Id~li~~T~t~~~~~~~~a~~v~~~-Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i  125 (396)
                      --+.+++-+|.+.+|++.  ..+.||.|||+|.--.-. -|+-..-+.+ -|.+...++--++.+|-+.-.|+.+...+|
T Consensus        64 lmphdlar~al~~ll~kt~lpke~~dyii~gtviqevk-tsniareaal~agfsdktpahtvtmacissn~amttgmgli  142 (465)
T KOG1392          64 LMPHDLAREALKALLEKTKLPKEQLDYIICGTVIQEVK-TSNIAREAALLAGFSDKTPAHTVTMACISSNVAMTTGMGLI  142 (465)
T ss_pred             HCHHHHHHHHHHHHHHHCCCCHHHHCEEEEHHHHHHHH-CCHHHHHHHHHCCCCCCCCCCEEEEEHHCCCHHHHCCCEEE
T ss_conf             06058899999999875259888833453034577775-01288899986589888864156521010351433062057


Q ss_pred             HCCCCCEEEEEECCC
Q ss_conf             739997699950332
Q gi|254781019|r  126 AKSPERKVLIVASDV  140 (396)
Q Consensus       126 ~sg~~~~aLVV~sD~  140 (396)
                      ++|....++.=+.|.
T Consensus       143 atg~~dvivaggvel  157 (465)
T KOG1392         143 ATGNADVIVAGGVEL  157 (465)
T ss_pred             EECCCCEEEECCEEE
T ss_conf             507767798756554


No 126
>pfam02803 Thiolase_C Thiolase, C-terminal domain. Thiolase is reported to be structurally related to beta-ketoacyl synthase (pfam00109), and also chalcone synthase.
Probab=91.41  E-value=1  Score=23.51  Aligned_cols=87  Identities=17%  Similarity=0.178  Sum_probs=52.0

Q ss_pred             HHHHHHHHHHHHHHCCCCHHHCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH---H
Q ss_conf             9999999999999629882110123311454057888886411024544100134555433344453238543233---8
Q gi|254781019|r  206 LQSLEAVWHDYQKNKGHDFNDFQYFCYHQPFTRMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTAS---L  282 (396)
Q Consensus       206 ~~~~~~a~~~~l~~~g~~~~did~~v~H~p~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SAS---i  282 (396)
                      ...--.+++.+++++|++++|+|+|=+|-+|.-......+.+....          +++++.--.. -+|+-..||   +
T Consensus        21 ~~ap~~A~~~lL~r~gl~~~Did~~EinEAFA~~~l~~~~~l~id~----------ekvN~~GGai-AlGHP~GaSGarl   89 (123)
T pfam02803        21 GIGPAYAIPKALKKAGLTVNDIDLFEINEAFAAQALAVAKDLGIDP----------EKVNVNGGAI-ALGHPLGASGARI   89 (123)
T ss_pred             CCCHHHHHHHHHHHCCCCHHHCCEEEECHHHHHHHHHHHHHCCCCC----------CCCCCCCCCH-HHCCCCCCCHHHH
T ss_conf             1369999999999829985546645641456777899999719892----------0148988734-4278846624899


Q ss_pred             HHHHHHHHHHCCCCCCCCEEEEEEEC
Q ss_conf             99999999715743698889998407
Q gi|254781019|r  283 YIALISLLDHSSENLAGKRVGFFSYG  308 (396)
Q Consensus       283 ~l~L~slLe~~~~~~~G~rIll~syG  308 (396)
                      -+.|...|.+     .|.+.++.+-.
T Consensus        90 v~~l~~~L~~-----~~~~~G~as~C  110 (123)
T pfam02803        90 LVTLLHELKR-----RGGKYGLATLC  110 (123)
T ss_pred             HHHHHHHHHH-----HCCCEEEEEEE
T ss_conf             9999999998-----39999999970


No 127
>pfam02801 Ketoacyl-synt_C Beta-ketoacyl synthase, C-terminal domain. The structure of beta-ketoacyl synthase is similar to that of the thiolase family (pfam00108) and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=91.02  E-value=0.59  Score=24.95  Aligned_cols=79  Identities=16%  Similarity=0.079  Sum_probs=49.3

Q ss_pred             HHHHHHHHHHHHHCCCCHHHCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
Q ss_conf             99999999999962988211012331145405788888641102454410013455543334445323854323389999
Q gi|254781019|r  207 QSLEAVWHDYQKNKGHDFNDFQYFCYHQPFTRMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIAL  286 (396)
Q Consensus       207 ~~~~~a~~~~l~~~g~~~~did~~v~H~p~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L  286 (396)
                      +...+++++.+++.|++++||+|+-.|-...+..+....+-......+..     +.+ +....=..+|++..||=.+.|
T Consensus        25 ~~~~~~i~~Al~~agi~p~~I~~i~aHgtgT~~gD~~E~~ai~~~f~~~~-----~~~-~i~S~Ks~~GH~~~AsG~~~l   98 (117)
T pfam02801        25 PAQARAIRAALADAGLDPEDVDYVEAHGTGTPLGDPIEAEALKAVFGPGR-----RPL-PVGSVKSNIGHLEAAAGVAGL   98 (117)
T ss_pred             HHHHHHHHHHHHHHCCCHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCC-----CCC-CCCCCCCCCCCCHHHHHHHHH
T ss_conf             99999999999990989989798987537685437999999999966377-----887-677741153556376799999


Q ss_pred             HHHHH
Q ss_conf             99997
Q gi|254781019|r  287 ISLLD  291 (396)
Q Consensus       287 ~slLe  291 (396)
                      ...+.
T Consensus        99 i~~~l  103 (117)
T pfam02801        99 IKAVL  103 (117)
T ss_pred             HHHHH
T ss_conf             99999


No 128
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase; InterPro: IPR012793    Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.; GO: 0016747 transferase activity transferring groups other than amino-acyl groups, 0019619 protocatechuate catabolic process.
Probab=75.31  E-value=5.7  Score=18.83  Aligned_cols=90  Identities=17%  Similarity=0.217  Sum_probs=62.9

Q ss_pred             HHHHHHHHHHHHHC---CHHHCCEEEEECCCCCCCC-HHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCC
Q ss_conf             99999999999727---9578689999457887546-0058888632026877358984142035888998789999739
Q gi|254781019|r   53 TMAAAAALPIMQNQ---DKNLIDTLFFATESSVDQS-KSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACALVAKS  128 (396)
Q Consensus        53 tmA~~Aa~~~L~~~---~~~~Id~li~~T~t~~~~~-~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i~sg  128 (396)
                      +|++--.+.++.+.   +...||-++++...---.. ...+-+-.=+-|++..+...-++--|.+++.|+..+..-|++|
T Consensus        27 ~l~a~P~~~l~~~~~~~~~~~~d~v~~G~anqaGednrnvarm~~llaGlP~~v~~~t~nrlC~s~lda~~~~~ra~~~G  106 (400)
T TIGR02430        27 DLAAVPIKALLARNPSLDAAAIDDVILGCANQAGEDNRNVARMAALLAGLPVSVPGTTVNRLCGSGLDAIGLAARAIKAG  106 (400)
T ss_pred             HHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             02233699998532202656531443123211351035799999997068641101456665421378999988876327


Q ss_pred             CCCEEEEEECCCCC
Q ss_conf             99769995033201
Q gi|254781019|r  129 PERKVLIVASDVAR  142 (396)
Q Consensus       129 ~~~~aLVV~sD~~~  142 (396)
                      ....++.=+.|..+
T Consensus       107 ~~~l~iaGGvesms  120 (400)
T TIGR02430       107 EADLVIAGGVESMS  120 (400)
T ss_pred             CCCEEEECCCHHHC
T ss_conf             64357764721120


No 129
>pfam01135 PCMT Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT).
Probab=66.90  E-value=8.1  Score=17.86  Aligned_cols=42  Identities=31%  Similarity=0.262  Sum_probs=28.4

Q ss_pred             CCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEE
Q ss_conf             3854323389999999971574369888999840798303778
Q gi|254781019|r  274 IGNSYTASLYIALISLLDHSSENLAGKRVGFFSYGSGCVAEFF  316 (396)
Q Consensus       274 ~GN~~SASi~l~L~slLe~~~~~~~G~rIll~syGsG~~a~~f  316 (396)
                      +|+--+=|-|...+.+|+. -++++|++||-+|-|||-.+-++
T Consensus        50 i~~~~tis~P~~~a~ml~~-L~l~~g~~VLeIGtGsGY~tAlL   91 (205)
T pfam01135        50 IGYGQTISAPHMHAMMLEL-LELKPGMRVLEIGSGSGYLTACF   91 (205)
T ss_pred             CCCCCEECHHHHHHHHHHH-CCCCCCCEEEEECCCCCHHHHHH
T ss_conf             7999888638999999997-07899998999669965999999


No 130
>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed
Probab=64.65  E-value=8.8  Score=17.64  Aligned_cols=38  Identities=29%  Similarity=0.206  Sum_probs=25.2

Q ss_pred             CCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCE
Q ss_conf             854323389999999971574369888999840798303
Q gi|254781019|r  275 GNSYTASLYIALISLLDHSSENLAGKRVGFFSYGSGCVA  313 (396)
Q Consensus       275 GN~~SASi~l~L~slLe~~~~~~~G~rIll~syGsG~~a  313 (396)
                      |+--+=|-|...+.+|+. -.+++|++||-.|-|||-.+
T Consensus        56 ~~g~~is~P~~~A~ml~~-L~l~~~~~VLeIGtGsGY~t   93 (213)
T PRK00312         56 GCGQTISQPYMVARMTEL-LELKPGDRVLEIGTGSGYQA   93 (213)
T ss_pred             CCCCEECHHHHHHHHHHH-HCCCCCCEEEEECCCCCHHH
T ss_conf             899897679999999998-43689975999659860999


No 131
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=64.21  E-value=9.6  Score=17.42  Aligned_cols=39  Identities=21%  Similarity=0.088  Sum_probs=27.8

Q ss_pred             CCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCE
Q ss_conf             3854323389999999971574369888999840798303
Q gi|254781019|r  274 IGNSYTASLYIALISLLDHSSENLAGKRVGFFSYGSGCVA  313 (396)
Q Consensus       274 ~GN~~SASi~l~L~slLe~~~~~~~G~rIll~syGsG~~a  313 (396)
                      +|+--|=|-|...+.+++. -++++|+|||-.|-|||-.+
T Consensus        49 i~~~~tis~P~~~a~ml~~-L~~~~~~~VLeIGtGsGY~t   87 (205)
T PRK13944         49 LFAGATISAPHMVAMMCEL-IEPRPGMKILEVGTGSGYQA   87 (205)
T ss_pred             CCCCCEECHHHHHHHHHHH-HCCCCCCEEEEECCCCCHHH
T ss_conf             4899899779999999997-06899998999789851999


No 132
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=63.35  E-value=10  Score=17.24  Aligned_cols=39  Identities=23%  Similarity=0.161  Sum_probs=24.5

Q ss_pred             CCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEE
Q ss_conf             8543233899999999715743698889998407983037
Q gi|254781019|r  275 GNSYTASLYIALISLLDHSSENLAGKRVGFFSYGSGCVAE  314 (396)
Q Consensus       275 GN~~SASi~l~L~slLe~~~~~~~G~rIll~syGsG~~a~  314 (396)
                      |+--+=|-|...+.+|+. -++++|+|||-.|-|||-.+.
T Consensus        54 g~g~tis~P~~~a~ml~~-L~l~~~~~VLeIGtGsGY~tA   92 (214)
T PRK13942         54 GYGQTISAIHMVAIMCEL-LDLDEGQKVLEIGTGSGYHAA   92 (214)
T ss_pred             CCCCEECHHHHHHHHHHH-HCCCCCCEEEEECCCCCHHHH
T ss_conf             999788749999999997-279999979996799529999


No 133
>COG3894 Uncharacterized metal-binding protein [General function prediction only]
Probab=63.09  E-value=9.4  Score=17.46  Aligned_cols=70  Identities=17%  Similarity=0.226  Sum_probs=44.4

Q ss_pred             HHHHHHHHHHHHHHCCCCHHHCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
Q ss_conf             99999999999996298821101233114540578888864110245441001345554333444532385432338999
Q gi|254781019|r  206 LQSLEAVWHDYQKNKGHDFNDFQYFCYHQPFTRMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIA  285 (396)
Q Consensus       206 ~~~~~~a~~~~l~~~g~~~~did~~v~H~p~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~  285 (396)
                      .-++...+..++++.|+.++|++.+-+--+++..+..-..+..-.+.      ...       .....+|||+-|--+++
T Consensus       473 kgAirAG~~tL~~kaGie~eDie~~ymAGAfGtyid~~~A~~iGliP------d~~-------~kV~q~GNtslagAr~a  539 (614)
T COG3894         473 KGAIRAGHMTLIEKAGIELEDIERIYMAGAFGTYIDAKKAMVIGLIP------DCD-------LKVKQIGNTSLAGAREA  539 (614)
T ss_pred             HHHHHHHHHHHHHHCCCCHHHHHHEEECCCCCCCCCHHHHHEEECCC------CCC-------HHHHHHCCCHHHHHHHH
T ss_conf             88899889999998099755424403214552302656730350567------851-------54654366068889999


Q ss_pred             HHH
Q ss_conf             999
Q gi|254781019|r  286 LIS  288 (396)
Q Consensus       286 L~s  288 (396)
                      |.+
T Consensus       540 Lls  542 (614)
T COG3894         540 LLS  542 (614)
T ss_pred             HHC
T ss_conf             856


No 134
>TIGR02446 FadI acetyl-CoA C-acyltransferase FadI; InterPro: IPR012806    This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (2.3.1.16 from EC) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (IPR012802 from INTERPRO). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in Escherichia coli.; GO: 0008415 acyltransferase activity, 0016740 transferase activity, 0006631 fatty acid metabolic process, 0016042 lipid catabolic process.
Probab=62.89  E-value=10  Score=17.19  Aligned_cols=95  Identities=13%  Similarity=0.135  Sum_probs=73.3

Q ss_pred             CCHHHHHHHHHHHHHHHC--CHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHH
Q ss_conf             599999999999999727--957868999945788754600588886320268773589841420358889987899997
Q gi|254781019|r   49 EDIVTMAAAAALPIMQNQ--DKNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACALVA  126 (396)
Q Consensus        49 Ed~~tmA~~Aa~~~L~~~--~~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i~  126 (396)
                      -.+++|+--.+.++|.+.  +++-|+-|+|+-.--.-..|.++--+.=--|.+-+..++.++-+|.....+..+...-|-
T Consensus        29 ~~a~dlGkmvv~~ll~r~~~~~~~ieq~v~GqvvqmP~aPniareivlGtGm~~~tdaysv~raCatsfq~~~nvaes~m  108 (430)
T TIGR02446        29 IPAVDLGKMVVSELLARSEIDPKLIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVTRACATSFQSAVNVAESIM  108 (430)
T ss_pred             CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCEEECCCCCCHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             64134457889877752167778977766100131577640233421026730001202445677777888998887775


Q ss_pred             CCCCCEEEEEECCCCCC
Q ss_conf             39997699950332014
Q gi|254781019|r  127 KSPERKVLIVASDVARY  143 (396)
Q Consensus       127 sg~~~~aLVV~sD~~~~  143 (396)
                      +|..+..+.=++|.++.
T Consensus       109 ~G~i~~GiaGGadsssv  125 (430)
T TIGR02446       109 AGAIEIGIAGGADSSSV  125 (430)
T ss_pred             HCCEEEEEECCCCCCCC
T ss_conf             15301311046654320


No 135
>PRK13980 NAD synthetase; Provisional
Probab=61.91  E-value=11  Score=17.17  Aligned_cols=119  Identities=19%  Similarity=0.153  Sum_probs=65.1

Q ss_pred             HHCCCCEEEEC-CCCCCHHHHHHHHHHHHHHHCCHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHH
Q ss_conf             30383246655-99859999999999999972795786899994578875460058888632026877358984142035
Q gi|254781019|r   35 VGIGQERMSVL-NPDEDIVTMAAAAALPIMQNQDKNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYS  113 (396)
Q Consensus        35 ~~lGi~~r~v~-~~~Ed~~tmA~~Aa~~~L~~~~~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g  113 (396)
                      +..|.+.--+. +-.-|+...|+-|++.    .+++.+-.|..-+......+...|-.+++.||+.  ...+|+...+.+
T Consensus        24 ~~~g~kg~VlGlSGGIDSavva~La~~A----lg~~~v~~v~mP~~~ss~~s~~dA~~la~~lgi~--~~~i~I~~~~~~   97 (264)
T PRK13980         24 EKAGFKGVVLGLSGGIDSAVVAYLAVKA----LGKENVLALLMPYRVSPPEDLEDALLVAERLGIE--YKVIEITPIVDA   97 (264)
T ss_pred             HHHCCCEEEEECCCCHHHHHHHHHHHHH----CCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCC--EEEEECHHHHHH
T ss_conf             9809980999798688899999999985----4966068998989999887899999999986998--499827999999


Q ss_pred             HHHHHHHHHHHHHCC--------------CCCEEEEEECCCCC-CCCCCCCCCCCCCCEEEEE
Q ss_conf             888998789999739--------------99769995033201-4588875334783024688
Q gi|254781019|r  114 ATCALHMACALVAKS--------------PERKVLIVASDVAR-YDLGSSGEPTQGCGAVAIL  161 (396)
Q Consensus       114 ~~~AL~~A~~~i~sg--------------~~~~aLVV~sD~~~-~~~~~~~~~t~GaGA~All  161 (396)
                      +...+.....+...+              .....||+++...+ +..+..-.  +|||++.+.
T Consensus        98 ~~~~~~~~~~~~~~NiqaR~Rm~~Ly~~An~~~~lVlgTgNksE~~~Gy~Tk--yGD~~~d~~  158 (264)
T PRK13980         98 FFSAVPDADRLRRGNIMARTRMVLLYDYANRDNRLVLGTSNKSELLLGYFTK--YGDGAVDIN  158 (264)
T ss_pred             HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHCCC--CCCCCCCHH
T ss_conf             9986310006688875898999999998643397765588674798721001--687665624


No 136
>TIGR00454 TIGR00454 conserved hypothetical protein TIGR00454; InterPro: IPR005245    This entry describes a family of conserved hypothetical proteins with no known function. .
Probab=57.87  E-value=13  Score=16.65  Aligned_cols=93  Identities=12%  Similarity=0.114  Sum_probs=64.6

Q ss_pred             EECCCCCCHHHHHHHHHHHHHHH----CCHHH-CCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHH
Q ss_conf             65599859999999999999972----79578-68999945788754600588886320268773589841420358889
Q gi|254781019|r   43 SVLNPDEDIVTMAAAAALPIMQN----QDKNL-IDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCA  117 (396)
Q Consensus        43 ~v~~~~Ed~~tmA~~Aa~~~L~~----~~~~~-Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~A  117 (396)
                      |.+.+-|-+  |=--|.+++++-    ....+ ++-++++| | | ..|.|..||.++-..-+++-..|  .+-.|++==
T Consensus        13 Rlg~d~EKP--L~evcGr~lIDhvl~~l~~~~GV~~ii~~T-S-P-hTP~Te~y~~~~~~~~~~ivvid--asGkGYiED   85 (204)
T TIGR00454        13 RLGRDVEKP--LLEVCGRKLIDHVLEALKKAKGVDNIIVVT-S-P-HTPKTEEYVAEKYKEYKRIVVID--ASGKGYIED   85 (204)
T ss_pred             CCCCCCCCC--HHHHCCCCHHHHHHHHHHHCCCCCEEEEEE-C-C-CCCCCHHHHHHCCCEEEEEEEEE--CCCCCCHHH
T ss_conf             226555653--375658504577778664047875379983-7-7-79763788730585045788997--699960252


Q ss_pred             HHHHHHHHHCCCCCEEEEEECCCCC
Q ss_conf             9878999973999769995033201
Q gi|254781019|r  118 LHMACALVAKSPERKVLIVASDVAR  142 (396)
Q Consensus       118 L~~A~~~i~sg~~~~aLVV~sD~~~  142 (396)
                      |.-|..+++..=....|||+||+..
T Consensus        86 l~E~~~hlE~~~~EP~lV~ssDl~~  110 (204)
T TIGR00454        86 LREVLSHLELAFSEPLLVVSSDLVL  110 (204)
T ss_pred             HHHHHHHHHHHHCCCEEEEECCHHH
T ss_conf             7899998776633985787436024


No 137
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family; InterPro: IPR014188   This entry represents a subfamily of the alcohol dehydrogenase, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This entry includes YhdH from Escherichia coli and YhfP from Bacillus subtilis both of which bind NADPH or NAD, but not zinc. Both proteins have been studied crystallographically for insight into function. .
Probab=55.51  E-value=8.7  Score=17.68  Aligned_cols=207  Identities=11%  Similarity=0.021  Sum_probs=89.9

Q ss_pred             CCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEE----ECCCCCCCCCCCCCCCCCCCCEEECCHH-----
Q ss_conf             9769995033201458887533478302468842687630353----1000156786511275887542356601-----
Q gi|254781019|r  130 ERKVLIVASDVARYDLGSSGEPTQGCGAVAILISSQTSILEIE----DITGIYTNDCMDFWRPNYRRTALVDGKY-----  200 (396)
Q Consensus       130 ~~~aLVV~sD~~~~~~~~~~~~t~GaGA~Allv~~~~~~~~~~----~~~~~~~~~~~df~rp~~~~~~~~dg~~-----  200 (396)
                      +|-+|.+...- .-...+|..|.- |.|--++-+++|+...-+    ..++.-..|..     -+.+|.+|.++.     
T Consensus        42 YKDALA~tg~g-~v~R~yP~~PGI-D~aG~Vv~S~dp~F~~GD~VivTGyglG~~H~G-----GysqyaRVp~dWlVpLP  114 (330)
T TIGR02823        42 YKDALAITGKG-GVVRSYPMIPGI-DLAGTVVSSEDPRFRPGDEVIVTGYGLGVSHDG-----GYSQYARVPADWLVPLP  114 (330)
T ss_pred             HHHHHEECCCC-CEEEECCCCCCC-CCEEEEEECCCCCCCCCCEEEEEEECCCCCCCC-----CCEEEEEECHHHEECCC
T ss_conf             30331013879-768877876881-754689844887757887189974024565157-----62235673323101588


Q ss_pred             ---HHHHHH---HHHHHH--HHHHHHHCC-CCHHHCCEEEE---------------------CCCCCHHHHH-HH-HHHC
Q ss_conf             ---698999---999999--999999629-88211012331---------------------1454057888-88-6411
Q gi|254781019|r  201 ---STKIYL---QSLEAV--WHDYQKNKG-HDFNDFQYFCY---------------------HQPFTRMAEK-AH-IRLS  248 (396)
Q Consensus       201 ---~~~~y~---~~~~~a--~~~~l~~~g-~~~~did~~v~---------------------H~p~~k~~~~-~~-~~l~  248 (396)
                         |.+..+   .+--.|  --..|+++| +++++=.=+|-                     |...+|.-++ -. +.|.
T Consensus       115 ~glsl~eAM~~GTAGfTAaL~V~aLe~~Gl~~P~~GpVlVTGAtGGVGS~Av~~L~~lGY~V~A~tGk~~~~~~yL~~LG  194 (330)
T TIGR02823       115 EGLSLREAMALGTAGFTAALSVMALERNGLLTPEDGPVLVTGATGGVGSLAVAILSKLGYEVVASTGKAEEEVEYLKELG  194 (330)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCC
T ss_conf             98898899986007789999999999726888888878870677877899999998379769997378377889998658


Q ss_pred             --CHHHHHHHHHH-HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCC--CCEEEEEEEEEC-
Q ss_conf             --02454410013-455543334445323854323389999999971574369888999840798--303778778602-
Q gi|254781019|r  249 --KIVHQNLSVAE-IEKAIGITTLYNRLIGNSYTASLYIALISLLDHSSENLAGKRVGFFSYGSG--CVAEFFSGIVQK-  322 (396)
Q Consensus       249 --~~~~~~~~~~~-~e~~~~~~~~~~~~~GN~~SASi~l~L~slLe~~~~~~~G~rIll~syGsG--~~a~~f~~~v~~-  322 (396)
                        +.+.++..... -.+.+.+.+.... +=+.|+..    |+.+|.   ..+.|=-|-.||.=.|  +.+.+|.+.++. 
T Consensus       195 A~evi~R~~l~~~a~~kPL~k~~WAGA-vDtVGG~~----La~~l~---~~~ygG~VA~cGlagG~~L~tTV~PFILRGV  266 (330)
T TIGR02823       195 ASEVIDREELSEDAPGKPLEKERWAGA-VDTVGGKT----LANVLA---QLKYGGAVAACGLAGGADLPTTVLPFILRGV  266 (330)
T ss_pred             CCCCCCHHHCCCCCCCCCCCCCCCCCE-EECCCHHH----HHHHHH---HHCCCCEEEEEECCCCCCCCCEECCHHHCCC
T ss_conf             110577112276878886312222215-74687579----999998---4068978999942679863501255043285


Q ss_pred             ---C----HHHHHHCCCHHHHHHCCCCCCHHHHHHHHH
Q ss_conf             ---2----687652038788974272238999999986
Q gi|254781019|r  323 ---N----YRKKSHQKRHQHIINSRIPISYQVYCDLHQ  353 (396)
Q Consensus       323 ---~----~~~~~~~~~~~~~L~~r~~l~~~~y~~~~~  353 (396)
                         +    +-.+..+..+++||++  .+.+...+++-+
T Consensus       267 ~LlGIDSV~~p~~~R~~~W~RLA~--dl~~~~L~~~~~  302 (330)
T TIGR02823       267 SLLGIDSVYCPMALREAAWQRLAT--DLKPRNLESLTT  302 (330)
T ss_pred             EEEEECHHCCCHHHHHHHHHHHHH--HCCHHHHHHHHC
T ss_conf             388853001887899999998874--159778887842


No 138
>cd01451 vWA_Magnesium_chelatase Magnesium chelatase: Mg-chelatase catalyses the insertion of Mg into protoporphyrin IX (Proto). In chlorophyll biosynthesis, insertion of Mg2+ into protoporphyrin IX is catalysed by magnesium chelatase in an ATP-dependent reaction. Magnesium chelatase is a three sub-unit (BchI, BchD and BchH) enzyme with a novel arrangement of domains: the C-terminal helical domain is located behind the nucleotide binding site. The BchD domain contains a AAA domain at its N-terminus and a VWA domain at its C-terminus. The VWA domain has been speculated to be involved in mediating protein-protein interactions.
Probab=54.86  E-value=14  Score=16.34  Aligned_cols=87  Identities=14%  Similarity=0.129  Sum_probs=49.0

Q ss_pred             CCHHHHHHHHHHHHHHHC-C-HHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHH
Q ss_conf             599999999999999727-9-57868999945788754600588886320268773589841420358889987899997
Q gi|254781019|r   49 EDIVTMAAAAALPIMQNQ-D-KNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACALVA  126 (396)
Q Consensus        49 Ed~~tmA~~Aa~~~L~~~-~-~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i~  126 (396)
                      ++-...+-.|+..+|.+. . .+.|.+|.|......-..|++...-.-.-.+. ...+    .++.....||..|..+++
T Consensus        16 ~~rl~~aK~a~~~ll~d~~~~~D~v~lv~F~g~~a~~~lppT~~~~~~~~~l~-~L~~----gG~T~l~~gL~~a~~~~~   90 (178)
T cd01451          16 RHRMAAAKGAVLSLLRDAYQRRDKVALIAFRGTEAEVLLPPTRSVELAKRRLA-RLPT----GGGTPLAAGLLAAYELAA   90 (178)
T ss_pred             CCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEECCCCCCHHHHHHHHH-CCCC----CCCCCHHHHHHHHHHHHH
T ss_conf             56799999999999997434678899999759755585688765799999872-1678----898519999999999999


Q ss_pred             CC----CCCEEEEEECCC
Q ss_conf             39----997699950332
Q gi|254781019|r  127 KS----PERKVLIVASDV  140 (396)
Q Consensus       127 sg----~~~~aLVV~sD~  140 (396)
                      ..    ...+.+|+-||=
T Consensus        91 ~~~~~~~~~~~iiLlTDG  108 (178)
T cd01451          91 EQARDPGQRPLIVVITDG  108 (178)
T ss_pred             HHCCCCCCCEEEEEECCC
T ss_conf             850278984399998469


No 139
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=52.16  E-value=12  Score=16.75  Aligned_cols=63  Identities=17%  Similarity=0.123  Sum_probs=28.9

Q ss_pred             HHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECC
Q ss_conf             76303832466559985999999999999997279578689999457887546005888863202687735898414
Q gi|254781019|r   33 FYVGIGQERMSVLNPDEDIVTMAAAAALPIMQNQDKNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQ  109 (396)
Q Consensus        33 ~~~~lGi~~r~v~~~~Ed~~tmA~~Aa~~~L~~~~~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~  109 (396)
                      +.+-+|.+. .++-   ..-|.|+.-+.++|   +...=|-||+-+-    ...+++..|.. .|+.+  --.|+.-
T Consensus        40 ~a~~~g~~~-av~v---~sgT~AL~lal~~l---~i~~gdeVivp~~----tf~at~~ai~~-~Ga~p--vfvDid~  102 (375)
T PRK11706         40 LEQRFGCAK-VLLT---PSCTAALEMAALLL---DIQPGDEVIMPSY----TFVSTANAFVL-RGAKI--VFVDIRP  102 (375)
T ss_pred             HHHHHCCCE-EEEE---CCHHHHHHHHHHHC---CCCCCCEEEECCC----CHHHHHHHHHH-CCCEE--EEEEECC
T ss_conf             999978493-9996---78899999999986---9889399998996----64999999998-39969--9997168


No 140
>KOG2915 consensus
Probab=49.71  E-value=4.4  Score=19.53  Aligned_cols=21  Identities=10%  Similarity=0.048  Sum_probs=7.7

Q ss_pred             HHHHHHHHHHCCCCCCEEEEE
Q ss_conf             058888632026877358984
Q gi|254781019|r   87 SAAIWLHKLLGLNSSCRVVEL  107 (396)
Q Consensus        87 ~~a~~v~~~Lgl~~~~~~~Di  107 (396)
                      |.+..+.+.++-..+..+||+
T Consensus       118 SlShaiaraV~ptGhl~tfef  138 (314)
T KOG2915         118 SLSHAIARAVAPTGHLYTFEF  138 (314)
T ss_pred             HHHHHHHHHHCCCCCEEEEEE
T ss_conf             488999986376762699983


No 141
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=49.49  E-value=17  Score=15.81  Aligned_cols=34  Identities=21%  Similarity=0.297  Sum_probs=22.7

Q ss_pred             CHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHH
Q ss_conf             60058888632026877358984142035888998
Q gi|254781019|r   85 SKSAAIWLHKLLGLNSSCRVVELKQACYSATCALH  119 (396)
Q Consensus        85 ~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~  119 (396)
                      .|++-....+.|.+.+.-..+||..+| |+-+|+.
T Consensus        60 qP~iVA~MlElL~l~pg~rVLEIGTGS-GYqAAlL   93 (317)
T PRK13943         60 QPSLMALFMEWVGLDKGMRVLEIGGGT-GYNAAVM   93 (317)
T ss_pred             HHHHHHHHHHHHCCCCCCEEEEECCCC-CHHHHHH
T ss_conf             689999999971789998689965774-3899999


No 142
>KOG4342 consensus
Probab=47.35  E-value=19  Score=15.60  Aligned_cols=38  Identities=29%  Similarity=0.441  Sum_probs=27.8

Q ss_pred             CCCCCC--HHHHHHHHHHHHCCCCCCCCEEEEEEECCCCC
Q ss_conf             854323--38999999997157436988899984079830
Q gi|254781019|r  275 GNSYTA--SLYIALISLLDHSSENLAGKRVGFFSYGSGCV  312 (396)
Q Consensus       275 GN~~SA--Si~l~L~slLe~~~~~~~G~rIll~syGsG~~  312 (396)
                      ||+|+|  |+--.|.++-.+..+...+.-.++||||-|-.
T Consensus       457 gntYtad~~v~dVL~tv~qnk~~~~~~~gl~lfG~GDGGG  496 (1078)
T KOG4342         457 GNTYTADGSVEDVLKTVAQNKDKGRANHGLFLFGFGDGGG  496 (1078)
T ss_pred             CCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCC
T ss_conf             8753566749999999985578443675349997258889


No 143
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases; InterPro: IPR005958   This entry describes tyrosine aminotransferase (2.6.1.5 from EC) as found in animals and Trypanosoma cruzi (Euglenozoa). It is the first enzyme of a pathway of tyrosine degradation via homogentisate.  L-tyrosine + 2-oxoglutarate = 4-hydroxyphenylpyruvate + L-glutamate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway are included in this family. ; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding, 0006519 amino acid and derivative metabolic process.
Probab=46.11  E-value=15  Score=16.23  Aligned_cols=121  Identities=16%  Similarity=0.197  Sum_probs=70.7

Q ss_pred             ECHHHHHHHCC--CCHH--HHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCHHHCCEEEEECCCCCCCC-HHHHHH
Q ss_conf             55999998709--9987--976303832466559985999999999999997279578689999457887546-005888
Q gi|254781019|r   17 LDLSVIAEKYR--LDVA--KFYVGIGQERMSVLNPDEDIVTMAAAAALPIMQNQDKNLIDTLFFATESSVDQS-KSAAIW   91 (396)
Q Consensus        17 v~~~~l~~~~g--~~~~--k~~~~lGi~~r~v~~~~Ed~~tmA~~Aa~~~L~~~~~~~Id~li~~T~t~~~~~-~~~a~~   91 (396)
                      ++.+.|....-  .+++  |--..|++..=++- +.=-|..-|.+|..++|+--.-+     =|+.+.|.-.. +++|.|
T Consensus        19 ~~iR~i~~~~~~~~~~~~~Kp~i~L~~GDPs~f-~~lrT~~ea~~Av~~al~Sg~~N-----gYap~~G~~~AR~AvA~y   92 (424)
T TIGR01265        19 VPIRKIVDSLKVSPNPEDVKPVIPLSHGDPSVF-GNLRTAPEAEEAVKDALRSGKFN-----GYAPSVGALAAREAVAEY   92 (424)
T ss_pred             CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCHHHHHHHHHHHHCCCCC-----CCCCCCCHHHHHHHHHHH
T ss_conf             428999998413788888830015888788877-78888789999999998347856-----766436867888999999


Q ss_pred             HH------HHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEE--------------CCCCCCCCC
Q ss_conf             86------32026877358984142035888998789999739997699950--------------332014588
Q gi|254781019|r   92 LH------KLLGLNSSCRVVELKQACYSATCALHMACALVAKSPERKVLIVA--------------SDVARYDLG  146 (396)
Q Consensus        92 v~------~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~--------------sD~~~~~~~  146 (396)
                      +.      +.|.  ....+=|+ .=|+|...||+++..-|+..++.++||==              =|+..|++|
T Consensus        93 ~~~sfvhn~~~~--~~l~a~DV-~ltsGCsqAIe~~I~aLA~~pG~NILvPRPGfP~Y~t~A~~~~lEvr~ydLd  164 (424)
T TIGR01265        93 LSNSFVHNQRLP--GKLSADDV-VLTSGCSQAIEIVIEALAQNPGANILVPRPGFPLYDTRAAFSGLEVRLYDLD  164 (424)
T ss_pred             HHCCEEECCCCC--CCCCCCCE-EEECCCHHHHHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHCCCCCCCCCCC
T ss_conf             662221257888--87576644-8847722689999999726898835568777866899997718720002467


No 144
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=45.69  E-value=19  Score=15.61  Aligned_cols=62  Identities=15%  Similarity=0.064  Sum_probs=26.8

Q ss_pred             HHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEEC
Q ss_conf             7630383246655998599999999999999727957868999945788754600588886320268773589841
Q gi|254781019|r   33 FYVGIGQERMSVLNPDEDIVTMAAAAALPIMQNQDKNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELK  108 (396)
Q Consensus        33 ~~~~lGi~~r~v~~~~Ed~~tmA~~Aa~~~L~~~~~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~  108 (396)
                      +.+-+|.+.--.+.    +-|.|...+..+|   +...=|-||+.+-|    ..+++..|. ..|+.+  --.|+.
T Consensus        38 ~~~~~g~k~~v~~~----sgT~AL~lal~al---~~~~gdeVivp~~t----f~at~~ai~-~~Ga~p--vf~Dvd   99 (380)
T TIGR03588        38 LAEYVGAKYAVAFN----SATSALHIACLAL---GVGPGDEVWTTPIT----FVATANCAL-YCGAKV--DFVDID   99 (380)
T ss_pred             HHHHHCCCEEEEEC----CHHHHHHHHHHHC---CCCCCCEEEECCCC----CHHHHHHHH-HCCCEE--EEEECC
T ss_conf             99997859499975----8899999999984---99998999967853----088679999-879968--998441


No 145
>PRK08507 prephenate dehydrogenase; Validated
Probab=44.91  E-value=20  Score=15.37  Aligned_cols=38  Identities=24%  Similarity=0.394  Sum_probs=23.5

Q ss_pred             HHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCC
Q ss_conf             5786899994578875460058888632026877358984142
Q gi|254781019|r   68 KNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQA  110 (396)
Q Consensus        68 ~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~a  110 (396)
                      ..+.|+|++||  |+......-   .+...+.+++-..|+...
T Consensus        56 i~~aDlVila~--Pv~~~~~~l---~~l~~l~~~~iitDv~Sv   93 (275)
T PRK08507         56 IKECDVIFLAI--PVDAIIEIL---QKLLDIKENTTIIDLGST   93 (275)
T ss_pred             CCCCCEEEEEC--CHHHHHHHH---HHHHHCCCCCEEEECCCH
T ss_conf             36579899917--699999999---998604678889834312


No 146
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA; InterPro: IPR004432   Members of this entry represent PfaA, which is involved in omega-3 polyunsaturated fatty acid biosynthesis, for example PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is found together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologues of PfaA, also included in this entry, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis; an alternative to the more familiar iterated mechanism of chain extension and desaturation, and like PfaA the more distant homologues are likewise found near genes for homologues of PfaB, PfaC, and/or PfaD..
Probab=43.94  E-value=21  Score=15.28  Aligned_cols=127  Identities=18%  Similarity=0.231  Sum_probs=66.6

Q ss_pred             EEEECCCEEECHHHHHHHC------------------CCCHHHHHH--HCCCCEEEECCCCCCHHHHHHHHHHHHHHHCC
Q ss_conf             8873489045599999870------------------999879763--03832466559985999999999999997279
Q gi|254781019|r    8 ISFYTTNQYLDLSVIAEKY------------------RLDVAKFYV--GIGQERMSVLNPDEDIVTMAAAAALPIMQNQD   67 (396)
Q Consensus         8 i~~y~P~~~v~~~~l~~~~------------------g~~~~k~~~--~lGi~~r~v~~~~Ed~~tmA~~Aa~~~L~~~~   67 (396)
                      +++=||++.|...|.++..                  |-|-+||-.  |+|=.++-..   -=..-|-.-..+|.|+..|
T Consensus        78 MEFGLPPNILELTD~sQLLSLvVAkEVL~DA~lpd~sgYDRDkiGITLGvGGGQK~~~---sL~aRLQyPVL~KV~K~SG  154 (2773)
T TIGR02813        78 MEFGLPPNILELTDISQLLSLVVAKEVLNDAKLPDDSGYDRDKIGITLGVGGGQKLSS---SLNARLQYPVLKKVFKASG  154 (2773)
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCC---CHHHHCCCHHHHHHHHHCC
T ss_conf             5357585166662288999999999998525788887876232025741476400022---0132203336888874158


Q ss_pred             HHHCC--EEE-------EECC--CCCC-CCHHHHHHHHHHHCCCC-CCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEE
Q ss_conf             57868--999-------9457--8875-46005888863202687-7358984142035888998789999739997699
Q gi|254781019|r   68 KNLID--TLF-------FATE--SSVD-QSKSAAIWLHKLLGLNS-SCRVVELKQACYSATCALHMACALVAKSPERKVL  134 (396)
Q Consensus        68 ~~~Id--~li-------~~T~--t~~~-~~~~~a~~v~~~Lgl~~-~~~~~Di~~aC~g~~~AL~~A~~~i~sg~~~~aL  134 (396)
                      .+|-|  +||       +.=|  |.|- ..-=++..|++++.+.. || .+|  .||.|.++||.+|.+-+--|+ +..+
T Consensus       155 ~~d~D~~~lI~KF~~~Yi~WEENSFPG~LGNVIsGRIANRFDlGG~NC-VVD--AACAGSLAA~~~Als~L~E~R-Se~M  230 (2773)
T TIGR02813       155 VEDEDSEMLIKKFQDQYIHWEENSFPGSLGNVISGRIANRFDLGGMNC-VVD--AACAGSLAALRLALSELLEGR-SEMM  230 (2773)
T ss_pred             CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCHHHHHCCCCCCH-HHH--HHHHHHHHHHHHHHHHHCCCC-CCEE
T ss_conf             876468999998762134441457897643301010110001588425-666--643667999999998630253-2145


Q ss_pred             EE---ECCCC
Q ss_conf             95---03320
Q gi|254781019|r  135 IV---ASDVA  141 (396)
Q Consensus       135 VV---~sD~~  141 (396)
                      |-   |+|-+
T Consensus       231 I~GGVC~DNS  240 (2773)
T TIGR02813       231 ITGGVCTDNS  240 (2773)
T ss_pred             EECCCCCCCC
T ss_conf             6275324888


No 147
>TIGR00263 trpB tryptophan synthase, beta subunit; InterPro: IPR006654   Tryptophan synthase catalyzes the last step in the biosynthesis of tryptophan , :  L-serine + 1-(indol-3-yl)glycerol 3-phosphate = L-tryptophan + glyceraldehyde 3-phosphate + H_2O  It has two functional domains, each found in bacteria and plants on a separate subunit: alpha chain (IPR002028 from INTERPRO) is for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate and beta chain is for the synthesis of tryptophan from indole and serine. In fungi the two domains are fused together on a single multifunctional protein .   The beta chain of the enzyme, represented here, requires pyridoxal-phosphate as a cofactor. The pyridoxal-phosphate group is attached to a lysine residue. The region around this lysine residue also contains two histidine residues which are part of the pyridoxal-phosphate binding site.; GO: 0004834 tryptophan synthase activity, 0006568 tryptophan metabolic process.
Probab=42.67  E-value=22  Score=15.15  Aligned_cols=141  Identities=16%  Similarity=0.089  Sum_probs=62.3

Q ss_pred             EEECCCEEEC-HHHHHHHCC---C--CHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCC--HHHCCEEEEECCC
Q ss_conf             8734890455-999998709---9--987976303832466559985999999999999997279--5786899994578
Q gi|254781019|r    9 SFYTTNQYLD-LSVIAEKYR---L--DVAKFYVGIGQERMSVLNPDEDIVTMAAAAALPIMQNQD--KNLIDTLFFATES   80 (396)
Q Consensus         9 ~~y~P~~~v~-~~~l~~~~g---~--~~~k~~~~lGi~~r~v~~~~Ed~~tmA~~Aa~~~L~~~~--~~~Id~li~~T~t   80 (396)
                      |-|||+.-+. .++|+.++.   .  |++. ..=+-.-=+.++ -+++++|.|-+=.+++ ....  ++.=|++=    |
T Consensus        11 GqyvPE~Lm~a~~eLe~af~~a~~DnD~~F-~~El~~lL~~Y~-GRpTPLt~A~nlt~~~-Gg~kiYLKREDLnH----T   83 (412)
T TIGR00263        11 GQYVPETLMPALEELEAAFEKAKKDNDPEF-KAELEELLKNYA-GRPTPLTFAKNLTEKL-GGAKIYLKREDLNH----T   83 (412)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCCHHH-HHHHHHHHHHCC-CCCCHHHHHHHHHHHC-CCCEEEEECHHHCC----C
T ss_conf             824318888999999999999862256788-999999998607-8986667999999853-89668861101046----5


Q ss_pred             CCCCCHHHHHH----HHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCC-CCCCCCCC
Q ss_conf             87546005888----86320268773589841420358889987899997399976999503320145888-75334783
Q gi|254781019|r   81 SVDQSKSAAIW----LHKLLGLNSSCRVVELKQACYSATCALHMACALVAKSPERKVLIVASDVARYDLGS-SGEPTQGC  155 (396)
Q Consensus        81 ~~~~~~~~a~~----v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~~~~-~~~~t~Ga  155 (396)
                      +  .-|-+.+.    |++++|  +.=-..+...+.-|-.+|+.-|.-    |..-.+=.=+.|+-|..+|= ..| ..||
T Consensus        84 G--AHKiNNalGQ~LLAKrMG--K~R~IAETGAGQHGVATAtaaAll----Gl~C~vYMGa~DV~RQ~pNVFRMe-llGA  154 (412)
T TIGR00263        84 G--AHKINNALGQALLAKRMG--KKRIIAETGAGQHGVATATAAALL----GLDCEVYMGAEDVERQKPNVFRME-LLGA  154 (412)
T ss_pred             C--HHHHHHHHHHHHHHHHCC--CCEEEEEECCCCHHHHHHHHHHHC----CCCEEEECCCCCHHHCCCCHHHHH-HCCC
T ss_conf             4--358999999999998728--935887408980379999999971----895598348613514577523451-3778


Q ss_pred             CEEEEEECCC
Q ss_conf             0246884268
Q gi|254781019|r  156 GAVAILISSQ  165 (396)
Q Consensus       156 GA~Allv~~~  165 (396)
                      --+++-.|..
T Consensus       155 ~V~pV~sGs~  164 (412)
T TIGR00263       155 KVVPVTSGSG  164 (412)
T ss_pred             EEEEECCCCC
T ss_conf             6833015787


No 148
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=42.36  E-value=21  Score=15.25  Aligned_cols=62  Identities=15%  Similarity=0.153  Sum_probs=27.4

Q ss_pred             HHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEEC
Q ss_conf             7630383246655998599999999999999727957868999945788754600588886320268773589841
Q gi|254781019|r   33 FYVGIGQERMSVLNPDEDIVTMAAAAALPIMQNQDKNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELK  108 (396)
Q Consensus        33 ~~~~lGi~~r~v~~~~Ed~~tmA~~Aa~~~L~~~~~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~  108 (396)
                      +.+-+|.+.--.+    ..-|.|+..+..+| +.+|.  |-||+-+    ....+++..+.. .|..+  --.|+.
T Consensus        42 ~a~~~g~k~av~v----~sgT~AL~lal~al-~i~~g--deVi~p~----~tf~at~~ai~~-~Ga~p--vf~Did  103 (379)
T PRK11658         42 FCQLTGNQHAIAV----SSATAGMHITLMAL-GIGPG--DEVITPS----QTWVSTLNMIVL-LGATP--VMVDVD  103 (379)
T ss_pred             HHHHHCCCEEEEE----CCHHHHHHHHHHHC-CCCCC--CEEEECC----CCHHHHHHHHHH-CCCEE--EEECCC
T ss_conf             9999786949997----68899999999986-98883--9999899----556999999998-19989--974574


No 149
>PRK07591 threonine synthase; Validated
Probab=40.54  E-value=24  Score=14.95  Aligned_cols=36  Identities=11%  Similarity=0.140  Sum_probs=29.3

Q ss_pred             CCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCC
Q ss_conf             5432338999999997157436988899984079830
Q gi|254781019|r  276 NSYTASLYIALISLLDHSSENLAGKRVGFFSYGSGCV  312 (396)
Q Consensus       276 N~~SASi~l~L~slLe~~~~~~~G~rIll~syGsG~~  312 (396)
                      -..+|..+-+|..+.+ .|.+.++++|.++--|+|+.
T Consensus       358 EpasA~alAgl~kl~e-~G~i~~de~VV~~lTG~GLK  393 (422)
T PRK07591        358 ETAGGTTVAVLKKLVE-AGKIDPDETTVVYITGNGLK  393 (422)
T ss_pred             CCCHHHHHHHHHHHHH-CCCCCCCCEEEEEECCCCCC
T ss_conf             8608999999999997-69999999499990887667


No 150
>TIGR03285 methan_mark_14 putative methanogenesis marker protein 14. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=40.19  E-value=24  Score=14.92  Aligned_cols=33  Identities=9%  Similarity=0.124  Sum_probs=23.1

Q ss_pred             CCCCHHHHHHHHHHHHHHHCC--HHHCCEEEEECC
Q ss_conf             985999999999999997279--578689999457
Q gi|254781019|r   47 PDEDIVTMAAAAALPIMQNQD--KNLIDTLFFATE   79 (396)
Q Consensus        47 ~~Ed~~tmA~~Aa~~~L~~~~--~~~Id~li~~T~   79 (396)
                      ..|.+..|-......++++++  .+|++.++=.|-
T Consensus        61 tresV~elV~dtl~e~~k~A~l~i~DL~FVVRSTG   95 (445)
T TIGR03285        61 TRESVAELVKDTLKESLKKAGLDIDDLDFVVRSTG   95 (445)
T ss_pred             CHHHHHHHHHHHHHHHHHHCCCCCHHCCEEEEECC
T ss_conf             18899999999999999973998022557995064


No 151
>TIGR00108 eRF peptide chain release factor eRF/aRF, subunit 1; InterPro: IPR004403 These proteins are translation factors that have been characterised in eukaryotes as the non-GTP-binding subunit of a cytosolic heterodimer that acts as a translation release factor for all three stop codons. Members of this orthologous family are found in Eukarya and Archaea. The name used should be eRF1 for the Archaea and aRF1 for the Eukarya. Alternative names include eRF1, SUP45, omnipotent suppressor protein 1.; GO: 0016149 translation release factor activity codon specific, 0006415 translational termination, 0005737 cytoplasm.
Probab=39.90  E-value=22  Score=15.15  Aligned_cols=75  Identities=25%  Similarity=0.273  Sum_probs=53.4

Q ss_pred             HHHCCEEEEECCCCCC-CCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCC
Q ss_conf             5786899994578875-460058888632026877358984142035888998789999739997699950332014588
Q gi|254781019|r   68 KNLIDTLFFATESSVD-QSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACALVAKSPERKVLIVASDVARYDLG  146 (396)
Q Consensus        68 ~~~Id~li~~T~t~~~-~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~~~  146 (396)
                      .+=|.+.|     ||+ ..+..+-++-..|+-..|+-.=.....--+++.|+.+=.-+.+.=|.+=.++.|+++.+.+++
T Consensus        29 TeLiSLyI-----PP~~~I~dv~~~Lr~ElsqASNIKSk~tr~nVlSAIe~ilqrLKlf~~pPe~GlV~~~G~v~~~gpG  103 (425)
T TIGR00108        29 TELISLYI-----PPDRQISDVAKHLREELSQASNIKSKQTRKNVLSAIEAILQRLKLFKKPPENGLVIFCGMVPREGPG  103 (425)
T ss_pred             CEEEEEEE-----CCCCCCHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCC
T ss_conf             24789986-----7889511788888875213202022221135789999999986421577302768998676159888


Q ss_pred             C
Q ss_conf             8
Q gi|254781019|r  147 S  147 (396)
Q Consensus       147 ~  147 (396)
                      +
T Consensus       104 ~  104 (425)
T TIGR00108       104 T  104 (425)
T ss_pred             C
T ss_conf             4


No 152
>COG3897 Predicted methyltransferase [General function prediction only]
Probab=38.40  E-value=25  Score=14.84  Aligned_cols=10  Identities=30%  Similarity=0.734  Sum_probs=4.5

Q ss_pred             HHHHHHHCCC
Q ss_conf             9999996298
Q gi|254781019|r  213 WHDYQKNKGH  222 (396)
Q Consensus       213 ~~~~l~~~g~  222 (396)
                      +...++..|.
T Consensus       164 ~~~~l~~~g~  173 (218)
T COG3897         164 WKDRLAEAGA  173 (218)
T ss_pred             HHHHHHHCCC
T ss_conf             9999985797


No 153
>COG0533 QRI7 Metal-dependent proteases with possible chaperone activity [Posttranslational modification, protein turnover, chaperones]
Probab=38.31  E-value=26  Score=14.73  Aligned_cols=79  Identities=13%  Similarity=0.068  Sum_probs=42.9

Q ss_pred             HHHHHHHHHHHCC--HHHCCEEEEECCCCCCCCHHHHHH--HHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCC
Q ss_conf             9999999997279--578689999457887546005888--863202687735898414203588899878999973999
Q gi|254781019|r   55 AAAAALPIMQNQD--KNLIDTLFFATESSVDQSKSAAIW--LHKLLGLNSSCRVVELKQACYSATCALHMACALVAKSPE  130 (396)
Q Consensus        55 A~~Aa~~~L~~~~--~~~Id~li~~T~t~~~~~~~~a~~--v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i~sg~~  130 (396)
                      -....+++|++++  ++|||+|-+ | .+|-..++.-+-  .++.|.+.-+.+.+-++ -|-|=+.+-......   ..-
T Consensus        54 i~~li~~al~eA~~~~~dID~IA~-T-~gPGL~gaL~VG~~~Ak~LA~a~~kPli~Vn-H~~gHi~a~~l~~~~---~~p  127 (342)
T COG0533          54 IPPLIEEALAEAGVSLEDIDAIAV-T-AGPGLGGALLVGATAAKALALALNKPLIPVN-HLEGHIEAARLETGL---AFP  127 (342)
T ss_pred             HHHHHHHHHHHCCCCHHCCCEEEE-E-CCCCCHHHHHHHHHHHHHHHHHHCCCEEECC-HHHHHHHHHHHCCCC---CCC
T ss_conf             999999999984998301888998-1-6999447789999999999998299972312-279888788752478---898


Q ss_pred             CEEEEEECC
Q ss_conf             769995033
Q gi|254781019|r  131 RKVLIVASD  139 (396)
Q Consensus       131 ~~aLVV~sD  139 (396)
                      --+|+|+.-
T Consensus       128 ~v~LlVSGG  136 (342)
T COG0533         128 PVALLVSGG  136 (342)
T ss_pred             CEEEEEECC
T ss_conf             179999558


No 154
>PRK05638 threonine synthase; Validated
Probab=37.79  E-value=26  Score=14.68  Aligned_cols=37  Identities=27%  Similarity=0.293  Sum_probs=31.5

Q ss_pred             CCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCC
Q ss_conf             85432338999999997157436988899984079830
Q gi|254781019|r  275 GNSYTASLYIALISLLDHSSENLAGKRVGFFSYGSGCV  312 (396)
Q Consensus       275 GN~~SASi~l~L~slLe~~~~~~~G~rIll~syGsG~~  312 (396)
                      --..||..+-+|..+++ .|.+.++++|.++--|+|+.
T Consensus       322 ~EPasAaa~Agl~kl~e-~G~I~~~e~VV~vlTGsGLK  358 (443)
T PRK05638        322 AELSSAVVMPALLKLVE-TGFIEKGDRVVLVVTGSGLK  358 (443)
T ss_pred             ECHHHHHHHHHHHHHHH-CCCCCCCCEEEEEECCCCCC
T ss_conf             77578999999999997-69989999299996888777


No 155
>pfam01041 DegT_DnrJ_EryC1 DegT/DnrJ/EryC1/StrS aminotransferase family. The members of this family are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA, StsC, and StsS. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase EC:2.6.1.50, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin.
Probab=35.15  E-value=29  Score=14.42  Aligned_cols=62  Identities=19%  Similarity=0.133  Sum_probs=30.1

Q ss_pred             HHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEEC
Q ss_conf             7630383246655998599999999999999727957868999945788754600588886320268773589841
Q gi|254781019|r   33 FYVGIGQERMSVLNPDEDIVTMAAAAALPIMQNQDKNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELK  108 (396)
Q Consensus        33 ~~~~lGi~~r~v~~~~Ed~~tmA~~Aa~~~L~~~~~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~  108 (396)
                      +.+-+|.+. .++   -..-|.|..++.+++. ..+.  |-||+    |.+..++++.-+.. .|+.+  .-.|+.
T Consensus        34 ~~~~~g~k~-~v~---~~sgT~Al~lal~a~~-~~~g--deVi~----p~~t~~at~~ai~~-~G~~p--vf~Dvd   95 (363)
T pfam01041        34 FAAYLGVKH-AVA---VSSGTAALHLALRALG-IGPG--DEVIV----PSFTFVATANAVLY-LGAKP--VFVDID   95 (363)
T ss_pred             HHHHHCCCE-EEE---ECCHHHHHHHHHHHCC-CCCC--CEEEE----CCCCCHHHHHHHHH-CCCEE--EEEECC
T ss_conf             999978495-999---7588999999999859-8892--99997----99775988999998-69979--985064


No 156
>pfam05834 Lycopene_cycl Lycopene cyclase protein. This family consists of lycopene beta and epsilon cyclase proteins. Carotenoids with cyclic end groups are essential components of the photosynthetic membranes in all plants, algae, and cyanobacteria. These lipid-soluble compounds protect against photo-oxidation, harvest light for photosynthesis, and dissipate excess light energy absorbed by the antenna pigments. The cyclisation of lycopene (psi, psi-carotene) is a key branch point in the pathway of carotenoid biosynthesis. Two types of cyclic end groups are found in higher plant carotenoids: the beta and epsilon rings. Carotenoids with two beta rings are ubiquitous, and those with one beta and one epsilon ring are common; however, carotenoids with two epsilon rings are rare.
Probab=34.93  E-value=29  Score=14.40  Aligned_cols=20  Identities=20%  Similarity=0.365  Sum_probs=12.8

Q ss_pred             HHHHHHHHHHHHHCCCCHHH
Q ss_conf             99999999999962988211
Q gi|254781019|r  207 QSLEAVWHDYQKNKGHDFND  226 (396)
Q Consensus       207 ~~~~~a~~~~l~~~g~~~~d  226 (396)
                      +.....+..+++..|+....
T Consensus       213 ~~~~~~i~~yl~~~gi~~~~  232 (374)
T pfam05834       213 DALKQRLMDYARALGWRILE  232 (374)
T ss_pred             HHHHHHHHHHHHHCCCCCCE
T ss_conf             99999999999972998523


No 157
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=33.12  E-value=31  Score=14.22  Aligned_cols=90  Identities=16%  Similarity=0.146  Sum_probs=43.3

Q ss_pred             CCCEEEEEEEECCCEEECHHHHHHHCCCCHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHC--C---HHHCCEEE
Q ss_conf             962066888734890455999998709998797630383246655998599999999999999727--9---57868999
Q gi|254781019|r    1 MAIGIEDISFYTTNQYLDLSVIAEKYRLDVAKFYVGIGQERMSVLNPDEDIVTMAAAAALPIMQNQ--D---KNLIDTLF   75 (396)
Q Consensus         1 M~vGI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~~lGi~~r~v~~~~Ed~~tmA~~Aa~~~L~~~--~---~~~Id~li   75 (396)
                      |||.|.+.|.==.+       |+..        .+..|.   .|...|-+..++...-.+.+++..  +   .++.|+++
T Consensus         2 mkI~IiGlGLIGgS-------la~a--------l~~~~~---~V~g~d~~~~~~~~A~~~g~id~~~~~~~~~~~aDlii   63 (280)
T PRK07417          2 MNIGIVGLGLIGGS-------LGLD--------LRSLGH---TVYGVSRRESTCERAIERGLVDEASTDLSLLKDCDLVI   63 (280)
T ss_pred             CEEEEEECCHHHHH-------HHHH--------HHHCCC---EEEEEECCHHHHHHHHHCCCCCEECCCHHHHCCCCEEE
T ss_conf             78999931857999-------9999--------996899---79999799999999998699752027874605799899


Q ss_pred             EECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHH
Q ss_conf             9457887546005888863202687735898414203
Q gi|254781019|r   76 FATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACY  112 (396)
Q Consensus        76 ~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~  112 (396)
                      +||  |+......-..+...  +++++-..|+...=.
T Consensus        64 la~--Pv~~~~~~~~~~~~~--l~~~~iitDv~SvK~   96 (280)
T PRK07417         64 LAL--PIGLLLPPSEELIPA--LPPEAIVTDVGSVKE   96 (280)
T ss_pred             ECC--CHHHHHHHHHHHHHH--CCCCCEEEECHHHHH
T ss_conf             879--747789999999864--789848996522307


No 158
>PRK02478 Maf-like protein; Reviewed
Probab=32.60  E-value=32  Score=14.17  Aligned_cols=27  Identities=30%  Similarity=0.337  Sum_probs=13.1

Q ss_pred             EEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEE
Q ss_conf             999457887546005888863202687735898
Q gi|254781019|r   74 LFFATESSVDQSKSAAIWLHKLLGLNSSCRVVE  106 (396)
Q Consensus        74 li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~D  106 (396)
                      ||.||.||-..      .+.+.+|++-.+...|
T Consensus         5 iILAS~SprR~------eLL~~~gi~f~v~~~d   31 (199)
T PRK02478          5 LILASKSPFRR------ALLKNAGLEFSAAAAD   31 (199)
T ss_pred             EEEECCCHHHH------HHHHHCCCCEEEECCC
T ss_conf             99737999999------9999789980996379


No 159
>PRK03359 putative electron transfer flavoprotein FixA; Reviewed
Probab=32.27  E-value=32  Score=14.13  Aligned_cols=25  Identities=20%  Similarity=0.139  Sum_probs=12.0

Q ss_pred             HHHHHHHHHHHHHCCHHHCCEEEEE
Q ss_conf             9999999999972795786899994
Q gi|254781019|r   53 TMAAAAALPIMQNQDKNLIDTLFFA   77 (396)
Q Consensus        53 tmA~~Aa~~~L~~~~~~~Id~li~~   77 (396)
                      .-|+++|.++=++.+-.++..+-++
T Consensus        39 e~AlE~AlrlkE~~gg~~VtvvsvG   63 (256)
T PRK03359         39 LNAIEAACQLKQQAAEAQVTALSVG   63 (256)
T ss_pred             HHHHHHHHHHHHHCCCCEEEEEEEC
T ss_conf             8999999998885199579999937


No 160
>PRK08197 threonine synthase; Validated
Probab=31.65  E-value=33  Score=14.07  Aligned_cols=35  Identities=29%  Similarity=0.271  Sum_probs=26.0

Q ss_pred             CCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCC
Q ss_conf             432338999999997157436988899984079830
Q gi|254781019|r  277 SYTASLYIALISLLDHSSENLAGKRVGFFSYGSGCV  312 (396)
Q Consensus       277 ~~SASi~l~L~slLe~~~~~~~G~rIll~syGsG~~  312 (396)
                      ..||.-+-+|..+.+ .|.+.++++|.+.--|+|+.
T Consensus       347 pasA~alAgl~kl~e-~G~i~~~~~VV~~lTG~GlK  381 (402)
T PRK08197        347 PEGAAALAAAKQLRE-SGWLKSGERVVLFNTGTGLK  381 (402)
T ss_pred             CHHHHHHHHHHHHHH-CCCCCCCCEEEEEECCCCCC
T ss_conf             369999999999998-29999999699990888667


No 161
>TIGR00080 pimt protein-L-isoaspartate O-methyltransferase; InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase () (PCMT)  (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyzes the transfer of a methyl group from S- adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerization of normal L-aspartyl and L- asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process.
Probab=30.69  E-value=34  Score=13.97  Aligned_cols=47  Identities=21%  Similarity=0.132  Sum_probs=30.2

Q ss_pred             HHHHCCCCCCCHHHHHHHHHHHH-CCCCCCCCEEEEEEECCCCCEEEE
Q ss_conf             45323854323389999999971-574369888999840798303778
Q gi|254781019|r  270 YNRLIGNSYTASLYIALISLLDH-SSENLAGKRVGFFSYGSGCVAEFF  316 (396)
Q Consensus       270 ~~~~~GN~~SASi~l~L~slLe~-~~~~~~G~rIll~syGsG~~a~~f  316 (396)
                      .+-.+|.--|=|-|.+-+..+|- ...+.+|+|+|=+|-|||=.+-+.
T Consensus        53 ~al~ig~~qtiS~p~mvA~m~~yL~nhL~~~~~vLeiG~GSGY~aavl  100 (228)
T TIGR00080        53 AALEIGYGQTISAPHMVAKMTEYLENHLKPGAKVLEIGTGSGYQAAVL  100 (228)
T ss_pred             CCCCCCCCCEECCHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHH
T ss_conf             520025676244078999999988852140355665047855899999


No 162
>PRK04425 Maf-like protein; Reviewed
Probab=30.66  E-value=24  Score=14.93  Aligned_cols=63  Identities=19%  Similarity=0.179  Sum_probs=25.6

Q ss_pred             EEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCH----HHHHHHHHHHHHHHH--CCCCCEEEEEECCCCC
Q ss_conf             99945788754600588886320268773589841420----358889987899997--3999769995033201
Q gi|254781019|r   74 LFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQAC----YSATCALHMACALVA--KSPERKVLIVASDVAR  142 (396)
Q Consensus        74 li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC----~g~~~AL~~A~~~i~--sg~~~~aLVV~sD~~~  142 (396)
                      ||.||.||-..      .+.+.+|++-.+..-|+.-..    ..--.++.+|..-.+  +......+||++|+-.
T Consensus         7 lILAS~SprR~------~LL~~~gi~f~v~~~~idE~~~~~e~~~~~a~~lA~~KA~~v~~~~~~~iVIgaDtvv   75 (196)
T PRK04425          7 LVLGTSSVFRR------EQMERLGIAFQAASPDFDETPMLGESAPQTALRLAEGKARSLTGRFPEALIVGADQVA   75 (196)
T ss_pred             EEECCCCHHHH------HHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEE
T ss_conf             99858999999------9998789995997699998999999989999999999999999758997798148499


No 163
>pfam02666 PS_Dcarbxylase Phosphatidylserine decarboxylase. This is a family of phosphatidylserine decarboxylases, EC:4.1.1.65. These enzymes catalyse the reaction: Phosphatidyl-L-serine <= phosphatidylethanolamine + CO2. Phosphatidylserine decarboxylase plays a central role in the biosynthesis of aminophospholipids by converting phosphatidylserine to phosphatidylethanolamine.
Probab=29.92  E-value=33  Score=14.12  Aligned_cols=25  Identities=28%  Similarity=0.638  Sum_probs=17.7

Q ss_pred             HCCCCCCCCEEEEEEECCCCCEEEEE
Q ss_conf             15743698889998407983037787
Q gi|254781019|r  292 HSSENLAGKRVGFFSYGSGCVAEFFS  317 (396)
Q Consensus       292 ~~~~~~~G~rIll~syGsG~~a~~f~  317 (396)
                      ....++.||++++|-|||=. -.+|.
T Consensus       154 ~g~~v~kG~e~G~f~fGStV-~l~f~  178 (201)
T pfam02666       154 EGDEVKKGDELGYFKFGSTV-VLLFP  178 (201)
T ss_pred             CCCEEECCCEEEEEECCCEE-EEEEE
T ss_conf             89798457488079628809-99995


No 164
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=29.54  E-value=26  Score=14.71  Aligned_cols=30  Identities=20%  Similarity=0.318  Sum_probs=16.6

Q ss_pred             HHHHHCCCCCCEEEEECCCHHHHHHHHHHHHH
Q ss_conf             86320268773589841420358889987899
Q gi|254781019|r   92 LHKLLGLNSSCRVVELKQACYSATCALHMACA  123 (396)
Q Consensus        92 v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~  123 (396)
                      +...|+|.+.-...||  +|..|..++..|..
T Consensus        64 ~~~kl~L~~G~~lLDi--GCGWG~l~~~aA~~   93 (283)
T COG2230          64 ILEKLGLKPGMTLLDI--GCGWGGLAIYAAEE   93 (283)
T ss_pred             HHHHCCCCCCCEEEEE--CCCHHHHHHHHHHH
T ss_conf             9975699999989874--78844999999998


No 165
>TIGR00631 uvrb excinuclease ABC, B subunit; InterPro: IPR004807 All proteins in this family for which functions are known are DNA helicases that function in the nucleotide excision repair and are endonucleases that make the 3' incision next to DNA damage. They are part of a pathway requiring UvrA, UvrB, UvrC, and UvrD homologs.; GO: 0009381 excinuclease ABC activity, 0006289 nucleotide-excision repair, 0005737 cytoplasm, 0009380 excinuclease repair complex.
Probab=29.24  E-value=36  Score=13.81  Aligned_cols=79  Identities=13%  Similarity=0.245  Sum_probs=41.5

Q ss_pred             HHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCC----CCEEEEEEEEECCHHHHH---HCCCHHHHHHCC
Q ss_conf             4445323854323389999999971574369888999840798----303778778602268765---203878897427
Q gi|254781019|r  268 TLYNRLIGNSYTASLYIALISLLDHSSENLAGKRVGFFSYGSG----CVAEFFSGIVQKNYRKKS---HQKRHQHIINSR  340 (396)
Q Consensus       268 ~~~~~~~GN~~SASi~l~L~slLe~~~~~~~G~rIll~syGsG----~~a~~f~~~v~~~~~~~~---~~~~~~~~L~~r  340 (396)
                      .+|++.+=-=..++.|.+|...+ ..   -|-|-+++. ==|=    =-.=||.|   +..+|..   -.+++...||||
T Consensus       305 ENYSRhl~GR~~GEpP~tLlDYF-~g---fP~DfLlvi-DESHVT~PQ~~GMY~G---D~SRK~~LVeYGFRLPSAlDNR  376 (667)
T TIGR00631       305 ENYSRHLSGRKPGEPPYTLLDYF-IG---FPEDFLLVI-DESHVTLPQIGGMYNG---DRSRKQTLVEYGFRLPSALDNR  376 (667)
T ss_pred             CHHCCCCCCCCCCCCCCCHHHHC-CC---CCCCEEEEE-EECCCCHHHHHHHHHC---CHHHHHHHHHCCCCCCHHCCCC
T ss_conf             00000216777631596477650-46---886508988-4025750221344130---4676543320277530013587


Q ss_pred             CCCCHHHHHHHHHHC
Q ss_conf             223899999998630
Q gi|254781019|r  341 IPISYQVYCDLHQDI  355 (396)
Q Consensus       341 ~~l~~~~y~~~~~~~  355 (396)
                       +|.++||++..+..
T Consensus       377 -PLkfeEF~~~~~Q~  390 (667)
T TIGR00631       377 -PLKFEEFEERINQV  390 (667)
T ss_pred             -CCCHHHHHHHCCCE
T ss_conf             -89879999855988


No 166
>pfam00814 Peptidase_M22 Glycoprotease family. The Peptidase M22 proteins are part of the HSP70-actin superfamily. The region represented here is an insert into the fold and is not found in the rest of the family (beyond the Peptidase M22 family). Included in this family are the Rhizobial NodU proteins and the HypF regulator. This region also contains the histidine dyad believed to coordinate the metal ion and hence provide catalytic activity. Interestingly the histidines are not well conserved, and there is a lack of experimental evidence to support peptidase activity as a general property of this family. There also appear to be instances of this domain outside of the HSP70-actin superfamily.
Probab=28.99  E-value=37  Score=13.79  Aligned_cols=52  Identities=10%  Similarity=0.008  Sum_probs=27.9

Q ss_pred             HHHHHHHHHHCC--HHHCCEEEEECCCCCCCCHHHH--HHHHHHHCCCCCCEEEEECC
Q ss_conf             999999997279--5786899994578875460058--88863202687735898414
Q gi|254781019|r   56 AAAALPIMQNQD--KNLIDTLFFATESSVDQSKSAA--IWLHKLLGLNSSCRVVELKQ  109 (396)
Q Consensus        56 ~~Aa~~~L~~~~--~~~Id~li~~T~t~~~~~~~~a--~~v~~~Lgl~~~~~~~Di~~  109 (396)
                      ....+++|++++  ++|||.|.+..  +|-...+.-  .-.++.|...-+.+.+-+++
T Consensus        33 ~~~i~~~l~~a~i~~~did~IAvt~--GPGl~~~L~vG~~~Ak~La~~l~~Pli~VnH   88 (225)
T pfam00814        33 LPLIEEALAEAGLSLEDLDAIAVTA--GPGLFTGLRVGATFAKGLALALDKPLVGVNH   88 (225)
T ss_pred             HHHHHHHHHHCCCCHHHCCEEEEEC--CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf             9999999998499965689999805--9981886999999999999995698402466


No 167
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT,  Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein 
Probab=28.85  E-value=37  Score=13.77  Aligned_cols=64  Identities=19%  Similarity=0.079  Sum_probs=32.5

Q ss_pred             HHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECC
Q ss_conf             976303832466559985999999999999997279578689999457887546005888863202687735898414
Q gi|254781019|r   32 KFYVGIGQERMSVLNPDEDIVTMAAAAALPIMQNQDKNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQ  109 (396)
Q Consensus        32 k~~~~lGi~~r~v~~~~Ed~~tmA~~Aa~~~L~~~~~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~  109 (396)
                      ++.+-+|.+. .++ .  ..-|.|..++.++|   +...=|.|++    |....++++.-|.. .|+.+  .-.|+.-
T Consensus        26 ~~~~~~g~k~-~v~-~--~sgt~Al~lal~~l---~~~~gdeVi~----p~~t~~at~~ai~~-~G~~p--v~~Di~~   89 (352)
T cd00616          26 AFAEYLGVKY-AVA-V--SSGTAALHLALRAL---GIGPGDEVIV----PSFTFVATANAILL-LGATP--VFVDIDP   89 (352)
T ss_pred             HHHHHHCCCE-EEE-E--CCHHHHHHHHHHHC---CCCCCCEEEE----CCCCCHHHHHHHHH-CCCEE--EEEECCC
T ss_conf             9999978593-999-7--68899999999986---9788399998----99763989999998-59989--9840777


No 168
>TIGR03419 NifU_clost FeS cluster assembly scaffold protein NifU, Clostridium type. NifU and NifS form a pair of iron-sulfur (FeS) cluster biosynthesis proteins much simpler than the ISC and SUF systems. Members of this protein family are a distinct group of NifU-like proteins, found always to a NifS-like protein and restricted to species that lack a SUF system. Typically, NIF systems service a smaller number of FeS-containing proteins than do ISC or SUF. Members of this particular branch typically are found, almost half the time, near the mnmA gene, involved in the carboxymethylaminomethyl modification of U34 in some tRNAs (see GenProp0704). While other NifU proteins are associated with nitrogen fixation, this family is not.
Probab=28.15  E-value=38  Score=13.70  Aligned_cols=16  Identities=19%  Similarity=0.536  Sum_probs=7.0

Q ss_pred             HHHHHHHHHHHHHHCC
Q ss_conf             9999999999999629
Q gi|254781019|r  206 LQSLEAVWHDYQKNKG  221 (396)
Q Consensus       206 ~~~~~~a~~~~l~~~g  221 (396)
                      .+++..++++|+.|+|
T Consensus       106 ~~Al~~Al~~y~~k~g  121 (121)
T TIGR03419       106 EEAIHKAINDYREKNG  121 (121)
T ss_pred             HHHHHHHHHHHHHHCC
T ss_conf             9999999999987269


No 169
>TIGR01752 flav_long flavodoxin; InterPro: IPR010086   Flavodoxins are small redox-active proteins with a flavin mononucleotide (FMN) prosthetic group. They function as electron transfer agents in a variety of microbial metabolic processes, including nitrogen fixation by nitrogenase , sulphite reduction , and light-dependent NADP+ reduction during photosynthesis . This entry describes the long chain type, typical for nitrogen fixation but associated with pyruvate formate-lyase activation and cobalamin-dependent methionine synthase activity in Escherichia coli .; GO: 0010181 FMN binding, 0006118 electron transport.
Probab=27.79  E-value=39  Score=13.66  Aligned_cols=36  Identities=25%  Similarity=0.396  Sum_probs=28.6

Q ss_pred             EEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCC
Q ss_conf             99994578875460058888632026877358984142
Q gi|254781019|r   73 TLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQA  110 (396)
Q Consensus        73 ~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~a  110 (396)
                      .|+|+|.|+.  ...+|-.|+..||-.+.+..+||+.+
T Consensus         3 GifyGt~TG~--T~~iAe~I~~~lG~~~~~d~~ni~~~   38 (176)
T TIGR01752         3 GIFYGTDTGN--TEGIAEKIAKELGKESDVDVFNIAKA   38 (176)
T ss_pred             EEEEECCCCH--HHHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf             7898458760--78999999998188866210132312


No 170
>PRK08317 hypothetical protein; Provisional
Probab=26.40  E-value=41  Score=13.50  Aligned_cols=204  Identities=15%  Similarity=0.089  Sum_probs=91.1

Q ss_pred             HHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCC
Q ss_conf             58888632026877358984142035888998789999739997699950332014588875334783024688426876
Q gi|254781019|r   88 AAIWLHKLLGLNSSCRVVELKQACYSATCALHMACALVAKSPERKVLIVASDVARYDLGSSGEPTQGCGAVAILISSQTS  167 (396)
Q Consensus        88 ~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~~~~~~~~t~GaGA~Allv~~~~~  167 (396)
                      -...+.+.|++.+.-..+|+.  |..|..+..+|...   +  ..+-|++.|++...+..+.+-..+.+         +.
T Consensus         7 ~r~~~l~~L~l~pG~~vLDiG--cG~G~~~~~la~~~---g--~~~~v~gvD~s~~~l~~a~~~~~~~~---------~~   70 (241)
T PRK08317          7 YRARTFELLAVQPGERVLDVG--CGPGNDLRELADRV---G--PEGRVVGIDRSEAMLALARERAAGLL---------SN   70 (241)
T ss_pred             HHHHHHHHCCCCCCCEEEEEC--CCCCHHHHHHHHHH---C--CCCEEEEEECCHHHHHHHHHHHHHCC---------CC
T ss_conf             999999736999979999966--41749999999974---9--99789999698899999999986228---------96


Q ss_pred             CCEEEECCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHH---HHHHHCCC---CHHHCCEEEECCCCCHHHH
Q ss_conf             30353100015678651127588754235660169899999999999---99996298---8211012331145405788
Q gi|254781019|r  168 ILEIEDITGIYTNDCMDFWRPNYRRTALVDGKYSTKIYLQSLEAVWH---DYQKNKGH---DFNDFQYFCYHQPFTRMAE  241 (396)
Q Consensus       168 ~~~~~~~~~~~~~~~~df~rp~~~~~~~~dg~~~~~~y~~~~~~a~~---~~l~~~g~---~~~did~~v~H~p~~k~~~  241 (396)
                       ..+....    .+..+|  |. ..++.+-...++. ++.....+++   +.++-.|.   .--|++.+++|.+.+.+.+
T Consensus        71 -v~~~~~d----~~~lp~--~d-~sfD~v~~~~~l~-h~~d~~~~l~e~~RvLkPGG~~vi~d~Dw~~~~~~~~~~~~~~  141 (241)
T PRK08317         71 -VEFVRGD----ADGLPF--PD-ESFDAVRSDRVLQ-HLEDPRRALAEMARVLRPGGRAVVLDTDWDTLVIHSGDRALMR  141 (241)
T ss_pred             -EEEEECC----HHHCCC--CC-CCCCEEEHHHHHH-HCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHH
T ss_conf             -4999554----643589--88-8704562211576-2258999999999981888389999667886742898889999


Q ss_pred             HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEEEEEEE
Q ss_conf             88864110245441001345554333444532385432338999999997157436988899984079830377877860
Q gi|254781019|r  242 KAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALISLLDHSSENLAGKRVGFFSYGSGCVAEFFSGIVQ  321 (396)
Q Consensus       242 ~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~slLe~~~~~~~G~rIll~syGsG~~a~~f~~~v~  321 (396)
                      +.+..+                       ...++   .+.+.--|..+|.++|-.  .-++           +.+....+
T Consensus       142 ~i~~~~-----------------------~~~~~---~~~~gr~L~~~l~~aG~~--~v~~-----------~~~~~~~~  182 (241)
T PRK08317        142 KILNFW-----------------------SDHFA---NPWLGRRLPGLFREAGLT--DIEV-----------EPYTLIET  182 (241)
T ss_pred             HHHHHH-----------------------HHHCC---CCHHHHHHHHHHHHCCCC--EEEE-----------EEEEEECC
T ss_conf             999999-----------------------97478---920789999999986990--5688-----------88778426


Q ss_pred             CCHHH---HHHCCCHHHHHHCCCCCCHHHHHHHHHHCC
Q ss_conf             22687---652038788974272238999999986306
Q gi|254781019|r  322 KNYRK---KSHQKRHQHIINSRIPISYQVYCDLHQDII  356 (396)
Q Consensus       322 ~~~~~---~~~~~~~~~~L~~r~~l~~~~y~~~~~~~~  356 (396)
                       .+..   ......+..+.-....++.++..++.....
T Consensus       183 -~~~~~~~~~~l~~~~~~~~~~g~~t~~e~~~w~~~l~  219 (241)
T PRK08317        183 -DLKEADKGFDLIRIARYAVEAGAISADEADAWLADLA  219 (241)
T ss_pred             -CCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
T ss_conf             -8663534879999999999839999999999999999


No 171
>TIGR01225 hutH histidine ammonia-lyase; InterPro: IPR005921    Histidine ammonia-lyase deaminates histidine to urocanic acid, the first step in histidine degradation. It is closely related to phenylalanine ammonia-lyase. ; GO: 0004397 histidine ammonia-lyase activity, 0006548 histidine catabolic process, 0005737 cytoplasm.
Probab=25.92  E-value=42  Score=13.45  Aligned_cols=14  Identities=7%  Similarity=0.207  Sum_probs=6.4

Q ss_pred             EEEECCCCCCCCHH
Q ss_conf             99945788754600
Q gi|254781019|r   74 LFFATESSVDQSKS   87 (396)
Q Consensus        74 li~~T~t~~~~~~~   87 (396)
                      -|||-.||.-..-+
T Consensus        49 ~vYGvNTGFG~l~~   62 (529)
T TIGR01225        49 TVYGVNTGFGKLAS   62 (529)
T ss_pred             EEEEEECCCCCHHH
T ss_conf             15641155001233


No 172
>KOG2112 consensus
Probab=25.88  E-value=42  Score=13.44  Aligned_cols=86  Identities=13%  Similarity=0.246  Sum_probs=38.0

Q ss_pred             CCHHHCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHC-CCCCCCC
Q ss_conf             882110123311454057888886411024544100134555433344453238543233899999999715-7436988
Q gi|254781019|r  222 HDFNDFQYFCYHQPFTRMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALISLLDHS-SENLAGK  300 (396)
Q Consensus       222 ~~~~did~~v~H~p~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~slLe~~-~~~~~G~  300 (396)
                      +.+..+.|+|+|+|......-.......      ....++  +.+...- ..-|...+++-.-   .+++++ ..-.+-.
T Consensus        26 l~l~NiKwIcP~aP~rpvt~~~G~~~~a------Wfd~~~--~~~~~~~-d~~~~~~aa~~i~---~Li~~e~~~Gi~~~   93 (206)
T KOG2112          26 LPLPNIKWICPTAPSRPVTLNGGAFMNA------WFDIME--LSSDAPE-DEEGLHRAADNIA---NLIDNEPANGIPSN   93 (206)
T ss_pred             CCCCCEEEECCCCCCCCCCCCCCCCCCC------EECCEE--ECCCCCH-HHHHHHHHHHHHH---HHHHHHHHCCCCCC
T ss_conf             8888703876789887621158875552------001042--0765311-1567889999999---99998987599844


Q ss_pred             EEEEEEECCCCCEEEEEEE
Q ss_conf             8999840798303778778
Q gi|254781019|r  301 RVGFFSYGSGCVAEFFSGI  319 (396)
Q Consensus       301 rIll~syGsG~~a~~f~~~  319 (396)
                      ||++.||+-|++-.+++..
T Consensus        94 rI~igGfs~G~a~aL~~~~  112 (206)
T KOG2112          94 RIGIGGFSQGGALALYSAL  112 (206)
T ss_pred             CEEECCCCCHHHHHHHHHH
T ss_conf             5167443742788998772


No 173
>PRK08361 aspartate aminotransferase; Provisional
Probab=25.75  E-value=42  Score=13.43  Aligned_cols=90  Identities=16%  Similarity=0.173  Sum_probs=54.5

Q ss_pred             CCCEEEECCCCCCHHHHHHHHHHHHHHHCCHHHCCEEEEECCCCC-CCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHH
Q ss_conf             832466559985999999999999997279578689999457887-5460058888632026877358984142035888
Q gi|254781019|r   38 GQERMSVLNPDEDIVTMAAAAALPIMQNQDKNLIDTLFFATESSV-DQSKSAAIWLHKLLGLNSSCRVVELKQACYSATC  116 (396)
Q Consensus        38 Gi~~r~v~~~~Ed~~tmA~~Aa~~~L~~~~~~~Id~li~~T~t~~-~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~  116 (396)
                      ++-...+.++|-.+..-..+|++++++.-      ..-++...+. ..-.++|.++.+..|..-+..-+-++.+   ...
T Consensus        33 dvI~l~~G~pd~~~p~~i~~a~~~~l~~~------~~~Y~~~~G~~~LReaia~~~~~~~g~~v~~d~I~vt~G---~~~  103 (390)
T PRK08361         33 NVISLGIGEPDFDTPKNIKEAAKRALDEG------WTHYTPNAGIPELREAIAEYYKKFYGVDVDVDNVIVTAG---AYE  103 (390)
T ss_pred             CCEECCCCCCCCCCCHHHHHHHHHHHHCC------CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHEEEECCC---HHH
T ss_conf             93899899899987899999999998468------888899888799999999999998788988232998778---999


Q ss_pred             HHHHHHHHHHCCCCCEEEEEE
Q ss_conf             998789999739997699950
Q gi|254781019|r  117 ALHMACALVAKSPERKVLIVA  137 (396)
Q Consensus       117 AL~~A~~~i~sg~~~~aLVV~  137 (396)
                      ||..+...+ .+++..+||-.
T Consensus       104 al~~~~~~l-~~pGD~Vli~~  123 (390)
T PRK08361        104 ATYLAFESL-LEQGDEVIIPD  123 (390)
T ss_pred             HHHHHHHHH-CCCCCEEEECC
T ss_conf             999999996-59999899847


No 174
>TIGR03496 FliI_clade1 flagellar protein export ATPase FliI. Members of this protein family are the FliI protein of bacterial flagellum systems. This protein acts to drive protein export for flagellar biosynthesis. The most closely related family is the YscN family of bacterial type III secretion systems. This model represents one (of three) segment of the FliI family tree. These have been modeled separately in order to exclude the type III secretion ATPases more effectively.
Probab=25.48  E-value=42  Score=13.40  Aligned_cols=36  Identities=22%  Similarity=0.576  Sum_probs=25.2

Q ss_pred             CCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEEEEEEE
Q ss_conf             432338999999997157436988899984079830377877860
Q gi|254781019|r  277 SYTASLYIALISLLDHSSENLAGKRVGFFSYGSGCVAEFFSGIVQ  321 (396)
Q Consensus       277 ~~SASi~l~L~slLe~~~~~~~G~rIll~syGsG~~a~~f~~~v~  321 (396)
                      -|.+|+|..|.+++|.+|..+.         |.|+.-.||...+.
T Consensus       258 gyp~~vf~~l~~l~ERag~~~~---------~~GSIT~~~~V~~~  293 (411)
T TIGR03496       258 GYPPSVFAKLPRLVERAGNGEE---------GKGSITAFYTVLVE  293 (411)
T ss_pred             CCCCCHHHHHHHHHHHCCCCCC---------CCEEEEEEEEEECC
T ss_conf             7885388887788874368999---------89868773589757


No 175
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=25.30  E-value=43  Score=13.37  Aligned_cols=20  Identities=40%  Similarity=0.317  Sum_probs=15.6

Q ss_pred             CCCCCCCEEEEEEECCCCCE
Q ss_conf             74369888999840798303
Q gi|254781019|r  294 SENLAGKRVGFFSYGSGCVA  313 (396)
Q Consensus       294 ~~~~~G~rIll~syGsG~~a  313 (396)
                      -.+++|++||=+|-|||-.+
T Consensus        68 L~~~~g~~VLEIGtGsGY~a   87 (209)
T COG2518          68 LELKPGDRVLEIGTGSGYQA   87 (209)
T ss_pred             HCCCCCCEEEEECCCCHHHH
T ss_conf             48999986888777830999


No 176
>PRK06260 threonine synthase; Validated
Probab=25.15  E-value=43  Score=13.36  Aligned_cols=43  Identities=21%  Similarity=0.122  Sum_probs=31.2

Q ss_pred             HHHHHCCC---CCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCC
Q ss_conf             44532385---432338999999997157436988899984079830
Q gi|254781019|r  269 LYNRLIGN---SYTASLYIALISLLDHSSENLAGKRVGFFSYGSGCV  312 (396)
Q Consensus       269 ~~~~~~GN---~~SASi~l~L~slLe~~~~~~~G~rIll~syGsG~~  312 (396)
                      .+.++-|=   ..||.-+-+|..+.+ .|.+.++++|++.--|+|+.
T Consensus       327 ~La~~eGi~vEpasA~alAgl~kl~e-~G~i~~~~~VV~~lTG~GlK  372 (400)
T PRK06260        327 LLARKEGIGVEPASAASVAGLIKLVE-MGVIDKDEKVVCVTTGHLLK  372 (400)
T ss_pred             HHHHHCCEEECCHHHHHHHHHHHHHH-CCCCCCCCEEEEECCCCCCC
T ss_conf             99974890678368999999999997-39999999799990788768


No 177
>cd01467 vWA_BatA_type VWA BatA type: Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses. In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if
Probab=25.01  E-value=43  Score=13.34  Aligned_cols=86  Identities=15%  Similarity=0.171  Sum_probs=46.9

Q ss_pred             CCHHHHHHHHHHHHHHHCCHHHCCEEEEECCCCCCCCHHHH--HHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHH
Q ss_conf             59999999999999972795786899994578875460058--8886320268773589841420358889987899997
Q gi|254781019|r   49 EDIVTMAAAAALPIMQNQDKNLIDTLFFATESSVDQSKSAA--IWLHKLLGLNSSCRVVELKQACYSATCALHMACALVA  126 (396)
Q Consensus        49 Ed~~tmA~~Aa~~~L~~~~~~~Id~li~~T~t~~~~~~~~a--~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i~  126 (396)
                      .+-++.|-++++.++++..-+.++++.|++.... ..|.+.  ..+.+.|.   .+...... +-...-.||..|..++.
T Consensus        23 ~~rl~~ak~~~~~~i~~~~~drvglv~Fs~~a~~-~~plT~d~~~~~~~l~---~i~~~~~~-ggT~i~~al~~a~~~l~   97 (180)
T cd01467          23 PSRLEAAKEVLSDFIDRRENDRIGLVVFAGAAFT-QAPLTLDRESLKELLE---DIKIGLAG-QGTAIGDAIGLAIKRLK   97 (180)
T ss_pred             CCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEE-ECCCCCCHHHHHHHHH---CCCCCCCC-CCCCHHHHHHHHHHHHH
T ss_conf             5899999999999997199975999997287367-3376656899999986---22445323-68608999999999764


Q ss_pred             CCC-CCEEEEEECC
Q ss_conf             399-9769995033
Q gi|254781019|r  127 KSP-ERKVLIVASD  139 (396)
Q Consensus       127 sg~-~~~aLVV~sD  139 (396)
                      ... ..+++|+-+|
T Consensus        98 ~~~~~~~~ivLlTD  111 (180)
T cd01467          98 NSEAKERVIVLLTD  111 (180)
T ss_pred             CCCCCCCEEEEEEC
T ss_conf             24766637999805


No 178
>pfam08704 GCD14 tRNA methyltransferase complex GCD14 subunit. GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA.
Probab=24.97  E-value=16  Score=15.96  Aligned_cols=38  Identities=16%  Similarity=0.079  Sum_probs=24.8

Q ss_pred             CHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHH
Q ss_conf             60058888632026877358984142035888998789
Q gi|254781019|r   85 SKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMAC  122 (396)
Q Consensus        85 ~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~  122 (396)
                      .|.-++++...|++.+..+.++-.-+-.+.+.+|..|.
T Consensus        87 YpkD~s~I~~~ldi~PG~~VlEaGtGSGsLT~~Larav  124 (309)
T pfam08704        87 YTPDISLIIMMLELKPGSVVCESGTGSGSLSHAIARTV  124 (309)
T ss_pred             CCCCHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHH
T ss_conf             56009999998098999999983678429999999974


No 179
>COG0133 TrpB Tryptophan synthase beta chain [Amino acid transport and metabolism]
Probab=24.76  E-value=44  Score=13.31  Aligned_cols=141  Identities=16%  Similarity=0.037  Sum_probs=63.8

Q ss_pred             EEECCCEEEC-HHHHHHHCC---CCHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCHHHCCEEEEECCCCCCC
Q ss_conf             8734890455-999998709---998797630383246655998599999999999999727957868999945788754
Q gi|254781019|r    9 SFYTTNQYLD-LSVIAEKYR---LDVAKFYVGIGQERMSVLNPDEDIVTMAAAAALPIMQNQDKNLIDTLFFATESSVDQ   84 (396)
Q Consensus         9 ~~y~P~~~v~-~~~l~~~~g---~~~~k~~~~lGi~~r~v~~~~Ed~~tmA~~Aa~~~L~~~~~~~Id~li~~T~t~~~~   84 (396)
                      |-|+|+.-+. ..||++++.   .|++...+ +-..-|.++ -..++++.|-+-.+.+=.++=.+.=|++-.+.      
T Consensus        14 G~yVpE~Lmpal~eLe~ay~~~~~D~~F~~e-l~~~l~~Y~-GRptpLy~a~~Lt~~~gakiyLKREDL~HtGA------   85 (396)
T COG0133          14 GQYVPETLMPALEELEKAYEKAKNDPEFQAE-LDYLLKDYA-GRPTPLYFAERLTEHLGAKIYLKREDLNHTGA------   85 (396)
T ss_pred             CEECHHHHHHHHHHHHHHHHHHHCCHHHHHH-HHHHHHHHC-CCCCHHHHHHHHHHHHCCEEEEEHHHHCCCCH------
T ss_conf             8866588899999999999997219999999-999999857-99981178887777539568985444146532------


Q ss_pred             CHHHH----HHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCC-CCCCCEEE
Q ss_conf             60058----88863202687735898414203588899878999973999769995033201458887533-47830246
Q gi|254781019|r   85 SKSAA----IWLHKLLGLNSSCRVVELKQACYSATCALHMACALVAKSPERKVLIVASDVARYDLGSSGEP-TQGCGAVA  159 (396)
Q Consensus        85 ~~~~a----~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~~~~~~~~-t~GaGA~A  159 (396)
                      -|-+.    +.++.++|-. . -..+...+.-|-..|+..|.-    |..-.+-.=+.|+.+..++ -.|+ ..||--+.
T Consensus        86 HKiNN~lGQ~LLAkrMGK~-r-iIAETGAGQHGVAtAta~A~f----gl~C~iYMGa~Dv~RQ~~N-VfRM~LlGA~V~p  158 (396)
T COG0133          86 HKINNALGQALLAKRMGKT-R-IIAETGAGQHGVATATAAALF----GLECVIYMGAEDVERQALN-VFRMRLLGAEVVP  158 (396)
T ss_pred             HHHHHHHHHHHHHHHHCCC-E-EEEECCCCCCCHHHHHHHHHH----CCCEEEEECCHHHHHCCCC-HHHHHHCCCEEEE
T ss_conf             6678899999999982884-4-886148873207999999982----9954999461565440522-1323325866888


Q ss_pred             EEECC
Q ss_conf             88426
Q gi|254781019|r  160 ILISS  164 (396)
Q Consensus       160 llv~~  164 (396)
                      +-.+.
T Consensus       159 V~sGs  163 (396)
T COG0133         159 VTSGS  163 (396)
T ss_pred             ECCCC
T ss_conf             41687


No 180
>pfam04298 Zn_peptidase_2 Putative neutral zinc metallopeptidase. Zinc metallopeptidase zinc binding regions have been predicted in some family members by a pattern match (Prosite:PS00142).
Probab=24.50  E-value=44  Score=13.28  Aligned_cols=18  Identities=17%  Similarity=-0.049  Sum_probs=9.8

Q ss_pred             HHHHHCCCCCCHHHHHHH
Q ss_conf             889742722389999999
Q gi|254781019|r  334 QHIINSRIPISYQVYCDL  351 (396)
Q Consensus       334 ~~~L~~r~~l~~~~y~~~  351 (396)
                      ...|++...++.+++...
T Consensus       173 l~~L~~~g~l~~~e~~~a  190 (222)
T pfam04298       173 LAILESGGILSPEELKGA  190 (222)
T ss_pred             HHHHHHCCCCCHHHHHHH
T ss_conf             999997699887889999


No 181
>pfam02353 CMAS Cyclopropane-fatty-acyl-phospholipid synthase. This family consist of Cyclopropane-fatty-acyl-phospholipid synthase or CFA synthase EC:2.1.1.79 this enzyme catalyse the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid <= S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid.
Probab=24.05  E-value=45  Score=13.23  Aligned_cols=91  Identities=14%  Similarity=0.042  Sum_probs=40.4

Q ss_pred             CHHHHHHHCCCCHHHHHHHCCCCEEEE----CCCCCCHHHHHHHHH-HHHHHHCCHHHCCE-EEEECCCCCCCCHHHHHH
Q ss_conf             599999870999879763038324665----599859999999999-99997279578689-999457887546005888
Q gi|254781019|r   18 DLSVIAEKYRLDVAKFYVGIGQERMSV----LNPDEDIVTMAAAAA-LPIMQNQDKNLIDT-LFFATESSVDQSKSAAIW   91 (396)
Q Consensus        18 ~~~~l~~~~g~~~~k~~~~lGi~~r~v----~~~~Ed~~tmA~~Aa-~~~L~~~~~~~Id~-li~~T~t~~~~~~~~a~~   91 (396)
                      +.+.|+.+-+++.+.+..-|+- +|.+    ....++++.-|-.+- ..++++.++++=+. |-.|.     -.-+.+.+
T Consensus         6 ~~~nI~~HYDl~ndFy~~~Ld~-~m~YSca~f~~~~~tLe~AQ~~Kl~~i~~~l~l~~g~~vLDiGC-----GWG~~a~~   79 (273)
T pfam02353         6 DAENIQAHYDLSNDFFALFLDP-TMTYSCAYFERPDMTLEEAQQAKLDLILDKLGLKPGMTLLDIGC-----GWGGLMRR   79 (273)
T ss_pred             HHHHHHHHCCCCHHHHHHHCCC-CCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECC-----CCHHHHHH
T ss_conf             9999999758988999987696-99886557179999999999999999998658899998999788-----80899999


Q ss_pred             HHHHHCCCCCCEEEEECCCHHHHHH
Q ss_conf             8632026877358984142035888
Q gi|254781019|r   92 LHKLLGLNSSCRVVELKQACYSATC  116 (396)
Q Consensus        92 v~~~Lgl~~~~~~~Di~~aC~g~~~  116 (396)
                      +++..|.  .+-++.++.....++.
T Consensus        80 ~a~~~g~--~v~giTlS~~Q~~~~~  102 (273)
T pfam02353        80 AAERYDV--NVVGLTLSKNQYKLAR  102 (273)
T ss_pred             HHHHCCC--EEEEEECCHHHHHHHH
T ss_conf             9984795--1899979789999999


No 182
>TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN; InterPro: IPR011975    This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation  which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in . This enzyme is related to aldehyde dehydrogenase family. This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate entry, IPR011966 from INTERPRO..
Probab=23.33  E-value=47  Score=13.14  Aligned_cols=85  Identities=14%  Similarity=0.156  Sum_probs=50.7

Q ss_pred             HHHHHHHHHHHHHHHCCHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHH---HHHC
Q ss_conf             9999999999999727957868999945788754600588886320268773589841420358889987899---9973
Q gi|254781019|r   51 IVTMAAAAALPIMQNQDKNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACA---LVAK  127 (396)
Q Consensus        51 ~~tmA~~Aa~~~L~~~~~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~---~i~s  127 (396)
                      ++-|.|+.||..|..+|-| -++|.++-.++-+       -+.+.|-+.|.++.+|.+.+-.=|=-=.++|..   |-+-
T Consensus       240 P~AltV~vAreVL~EaGfD-P~lV~Laa~~p~~-------~~Aq~LAl~P~vr~vDFTGS~AFG~WLe~nArQAqVYtEk  311 (560)
T TIGR02288       240 PLALTVQVAREVLGEAGFD-PNLVALAAEDPGE-------EVAQRLALDPAVRIVDFTGSNAFGEWLEQNARQAQVYTEK  311 (560)
T ss_pred             HHHHHHHHHHHHHHHHCCC-HHHHHHCCCCCCC-------HHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
T ss_conf             2678889999998741677-3020011258884-------3788851399538886258871126899866798888875


Q ss_pred             CCCCEEEEEECCCCCC
Q ss_conf             9997699950332014
Q gi|254781019|r  128 SPERKVLIVASDVARY  143 (396)
Q Consensus       128 g~~~~aLVV~sD~~~~  143 (396)
                      -..++++|=++|..+.
T Consensus       312 AGvN~viieSTddlka  327 (560)
T TIGR02288       312 AGVNTVIIESTDDLKA  327 (560)
T ss_pred             CCCCCEEECCHHHHHH
T ss_conf             0667158724166899


No 183
>PRK09585 anmK anhydro-N-acetylmuramic acid kinase; Reviewed
Probab=22.65  E-value=48  Score=13.06  Aligned_cols=56  Identities=16%  Similarity=0.203  Sum_probs=33.5

Q ss_pred             HHHHHHHHHHHHCC--HHHCCEEEEECCCCCCCCHH--------HHHHHHHHHCCCC--CCEEEEECCC
Q ss_conf             99999999997279--57868999945788754600--------5888863202687--7358984142
Q gi|254781019|r   54 MAAAAALPIMQNQD--KNLIDTLFFATESSVDQSKS--------AAIWLHKLLGLNS--SCRVVELKQA  110 (396)
Q Consensus        54 mA~~Aa~~~L~~~~--~~~Id~li~~T~t~~~~~~~--------~a~~v~~~Lgl~~--~~~~~Di~~a  110 (396)
                      .=++|+++++++.+  +++||+|-+--+| +.+.|.        ....|++.+|++.  +-|..|+..+
T Consensus        72 ~~~~~i~~~i~~~~~~~~~id~Ig~HGQT-i~H~P~~~~TlQiG~~~~ia~~tgi~VV~DFR~~Dia~G  139 (366)
T PRK09585         72 LFAEAVNALLAEAGLSPEDIDAIGSHGQT-VRHRPERGFTLQIGDGALLAELTGITVVADFRRRDVAAG  139 (366)
T ss_pred             HHHHHHHHHHHHCCCCCCCEEEEECCCCC-EEECCCCCEEEECCCHHHHHHHHCCCEEHHHHHHHHHCC
T ss_conf             99999999999849980363289758887-687158863543398899998819976075379898677


No 184
>TIGR02707 butyr_kinase butyrate kinase; InterPro: IPR011245   This group represents bacterial butyrate kinase, an enzyme that facilitates the formation of butyryl-CoA by phosphorylating butyrate in the presence of ATP to form butyryl phosphate . The final steps in butyrate synthesis by anaerobic bacteria can occur via butyrate kinase and phosphotransbutyrylase or via butyryl-CoA:acetate CoA-transferase, the latter providing the dominant route for butyrate formation in human colonic bacteria .; GO: 0005524 ATP binding, 0047761 butyrate kinase activity, 0016310 phosphorylation, 0005737 cytoplasm.
Probab=21.89  E-value=50  Score=12.96  Aligned_cols=28  Identities=18%  Similarity=0.216  Sum_probs=20.9

Q ss_pred             HHHHHHHHHHCCCCHHHCCEEEECCCCC
Q ss_conf             9999999996298821101233114540
Q gi|254781019|r  210 EAVWHDYQKNKGHDFNDFQYFCYHQPFT  237 (396)
Q Consensus       210 ~~a~~~~l~~~g~~~~did~~v~H~p~~  237 (396)
                      +.+.+++.+..|.+.++.+.+|.|..++
T Consensus       158 KAvARr~A~e~gK~YE~~N~ivaHlGGG  185 (353)
T TIGR02707       158 KAVARRIAKELGKRYEEMNLIVAHLGGG  185 (353)
T ss_pred             HHHHHHHHHHCCCCCCCCCEEEEECCCC
T ss_conf             8999999997289600445489982887


No 185
>pfam02514 CobN-Mg_chel CobN/Magnesium Chelatase. This family contains a domain common to the cobN protein and to magnesium protoporphyrin chelatase. CobN is implicated in the conversion of hydrogenobyrinic acid a,c-diamide to cobyrinic acid. Magnesium protoporphyrin chelatase is involved in chlorophyll biosynthesis.
Probab=21.74  E-value=50  Score=12.94  Aligned_cols=13  Identities=23%  Similarity=0.197  Sum_probs=4.4

Q ss_pred             CCCCCHHHHHHHH
Q ss_conf             8754600588886
Q gi|254781019|r   81 SVDQSKSAAIWLH   93 (396)
Q Consensus        81 ~~~~~~~~a~~v~   93 (396)
                      +.|...|+..+++
T Consensus       264 ~LDv~~Sl~~iL~  276 (1064)
T pfam02514       264 GLDVPASLVNLLR  276 (1064)
T ss_pred             CCCHHHHHHHHHH
T ss_conf             5373999999999


No 186
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=21.21  E-value=51  Score=12.88  Aligned_cols=49  Identities=24%  Similarity=0.445  Sum_probs=30.7

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECC---------CCCHHHHHHHHHHC
Q ss_conf             6016989999999999999996298821101233114---------54057888886411
Q gi|254781019|r  198 GKYSTKIYLQSLEAVWHDYQKNKGHDFNDFQYFCYHQ---------PFTRMAEKAHIRLS  248 (396)
Q Consensus       198 g~~~~~~y~~~~~~a~~~~l~~~g~~~~did~~v~H~---------p~~k~~~~~~~~l~  248 (396)
                      |.++.+. ++.+.+-+.+.+.+.|..+++| ++|+|-         |.+.|..++..+..
T Consensus        60 G~~t~~~-~~~i~~~m~~~l~~~g~~id~i-y~CPh~p~~~c~cRKP~pGMl~~a~~~~~  117 (181)
T PRK08942         60 GLFTEAQ-LNALHEKMDWSLADRGGDLDGI-YYCPHHPEDGCDCRKPKPGMLLSIAERLN  117 (181)
T ss_pred             CCCCHHH-HHHHHHHHHHHHHHCCCCEEEE-EECCCCCCCCCCCCCCCCHHHHHHHHHCC
T ss_conf             8677999-9999999999999769943137-87689971447788998499999999809


No 187
>pfam00670 AdoHcyase_NAD S-adenosyl-L-homocysteine hydrolase, NAD binding domain.
Probab=21.17  E-value=52  Score=12.87  Aligned_cols=21  Identities=24%  Similarity=0.349  Sum_probs=12.3

Q ss_pred             HHHHCCCCCCCCEEEEEEECC
Q ss_conf             997157436988899984079
Q gi|254781019|r  289 LLDHSSENLAGKRVGFFSYGS  309 (396)
Q Consensus       289 lLe~~~~~~~G~rIll~syGs  309 (396)
                      ++.....+..|++++.+|||-
T Consensus        13 i~r~tn~llaGk~vvV~GYG~   33 (162)
T pfam00670        13 IKRATDVMIAGKVAVVCGYGD   33 (162)
T ss_pred             HHHHHCCEECCCEEEEECCCC
T ss_conf             988617657487899967876


No 188
>TIGR01246 dapE_proteo succinyl-diaminopimelate desuccinylase; InterPro: IPR005941   The lysine/diaminopimelic acid branch of the aspartate pathway produces the essential amino acid lysine via the intermediate meso-diaminopimelic acid (meso-DAP), which is also a vital cell wall component in Gram-negative bacteria . The production of dihydropicolinate from aspartate-semialdehyde controls flux into the lysine/diaminopimelic acid pathway. Three variants of this pathway exist, differing in how tetrahydropicolinate (formed by reduction of dihydropicolinate) is metabolised to meso-DAP. One variant, the most commonly found one in archaea and bacteria, uses primarily succinyl intermediates, while a second variant, found only in Bacillus, utilises primarily acetyl intermediates. In the third variant, found in some Gram-positive bacteria, a dehydrogenase converts tetrahydropicolinate directly to meso-DAP. In all variants meso-DAP is subsequently converted to lysine by a decarboxylase, or, in Gram-negative bacteria, assimilated into the cell wall. Evidence exists that a fourth, currently unknown, variant of this pathway may function in plants .    Succinyl-diaminopimelate desuccinylase (3.5.1.18 from EC) hydrolyses N-succinyl-L,L-diaminopimelic acid which is required for the bacterial synthesis of lysine and meso-diaminopimelic acid.    This group of bacterial sequences belong to the MEROPS peptidase family M20 (clan MH), subfamily M20A (non-peptidase homologs).  ; GO: 0009014 succinyl-diaminopimelate desuccinylase activity, 0009089 lysine biosynthetic process via diaminopimelate.
Probab=21.13  E-value=52  Score=12.87  Aligned_cols=201  Identities=20%  Similarity=0.190  Sum_probs=98.2

Q ss_pred             CCEEEECCCCCCHHHHHHHHHHHH---------------HHHCCH----HHCCEEEEECCC-----CCCC---C-HHHHH
Q ss_conf             324665599859999999999999---------------972795----786899994578-----8754---6-00588
Q gi|254781019|r   39 QERMSVLNPDEDIVTMAAAAALPI---------------MQNQDK----NLIDTLFFATES-----SVDQ---S-KSAAI   90 (396)
Q Consensus        39 i~~r~v~~~~Ed~~tmA~~Aa~~~---------------L~~~~~----~~Id~li~~T~t-----~~~~---~-~~~a~   90 (396)
                      |+..||.+.|++...|=++-.+++               ..+.+-    +.=-.|.|+--|     |++.   + ||...
T Consensus         9 is~pSVTP~D~Gcq~~Ia~rL~~~gF~~e~~~f~d~kN~wa~~g~aif~~~~P~l~F~GHtDVVP~G~~e~W~~s~PF~p   88 (383)
T TIGR01246         9 ISRPSVTPNDAGCQDLIAERLKKIGFEIEILHFGDTKNLWATRGTAIFKDGEPVLAFAGHTDVVPAGPLEQWSSSPPFEP   88 (383)
T ss_pred             HCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             03788899847789999999845397589985087344454557146508876588746212113888877888769663


Q ss_pred             HHHH-HHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCC---CC-CEEEEEECCC---CC--------------CCCCC-
Q ss_conf             8863-2026877358984142035888998789999739---99-7699950332---01--------------45888-
Q gi|254781019|r   91 WLHK-LLGLNSSCRVVELKQACYSATCALHMACALVAKS---PE-RKVLIVASDV---AR--------------YDLGS-  147 (396)
Q Consensus        91 ~v~~-~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i~sg---~~-~~aLVV~sD~---~~--------------~~~~~-  147 (396)
                      .+.. .|=.+   -+.||+.+-++|+.|   |..||+.+   ++ +-+|+|+||=   +.              +.+|+ 
T Consensus        89 ~~~dG~lYGR---GAaDMKGs~Aafv~A---aerFv~~~pdhkGa~islLiTSDEEG~A~dGT~~vve~L~~r~~~IDyc  162 (383)
T TIGR01246        89 VERDGKLYGR---GAADMKGSLAAFVVA---AERFVKKNPDHKGASISLLITSDEEGEAIDGTKKVVETLMARDELIDYC  162 (383)
T ss_pred             EEECCCEECC---CCCCHHHHHHHHHHH---HHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEE
T ss_conf             4621217626---562146789999999---9999984777784053443330001331136889999999725899789


Q ss_pred             -CCCCC----CCCCEEEEEECCCCCC---CEEEECCCC------------------------CCCCCCCCCCCCC-----
Q ss_conf             -75334----7830246884268763---035310001------------------------5678651127588-----
Q gi|254781019|r  148 -SGEPT----QGCGAVAILISSQTSI---LEIEDITGI------------------------YTNDCMDFWRPNY-----  190 (396)
Q Consensus       148 -~~~~t----~GaGA~Allv~~~~~~---~~~~~~~~~------------------------~~~~~~df~rp~~-----  190 (396)
                       -+|||    -||   .+=+|++..+   +.+.+..|+                        ...+-.+|+.|..     
T Consensus       163 ~VGEPss~k~~GD---~iK~GRRGSi~g~L~i~G~QGHVAYPh~A~NP~H~~~p~L~~L~~~~lD~G~e~F~ptsl~I~N  239 (383)
T TIGR01246       163 IVGEPSSVKKLGD---VIKNGRRGSITGNLTIKGIQGHVAYPHLANNPVHKAAPVLAELTAIKLDEGNEFFPPTSLQITN  239 (383)
T ss_pred             EEECCCCCCCCCC---EEEECCCEEEEEEEEEEEEECCCCCHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECC
T ss_conf             8606535111688---6784231135444789887511046454158703699999998611288963435897532245


Q ss_pred             -------------CCCEEECCHHHHHHHHHHHHHHHHHHHHHC----CCCHHHCCEEEE----CCC--CCHHHHHHHHHH
Q ss_conf             -------------754235660169899999999999999962----988211012331----145--405788888641
Q gi|254781019|r  191 -------------RRTALVDGKYSTKIYLQSLEAVWHDYQKNK----GHDFNDFQYFCY----HQP--FTRMAEKAHIRL  247 (396)
Q Consensus       191 -------------~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~----g~~~~did~~v~----H~p--~~k~~~~~~~~l  247 (396)
                                   .-+..++=||+.+.-.+.+++-+...++++    +++. ++.|-.=    =|.  -+++++++...+
T Consensus       240 I~aGtG~~NVIPg~L~v~FN~Rfs~e~~~e~~k~~v~~il~~hCkeY~l~Y-~lew~~Sg~pFlT~P~~g~l~~~~~~~i  318 (383)
T TIGR01246       240 IHAGTGANNVIPGELKVQFNIRFSTEVSEETLKSRVEAILDQHCKEYGLDY-DLEWSLSGEPFLTNPIDGKLIDKVREAI  318 (383)
T ss_pred             CCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCE-EEEECCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf             578889887661112001341028667717899999999974220038841-6987215855278888763899999999


Q ss_pred             CC
Q ss_conf             10
Q gi|254781019|r  248 SK  249 (396)
Q Consensus       248 ~~  249 (396)
                      .+
T Consensus       319 ~~  320 (383)
T TIGR01246       319 EE  320 (383)
T ss_pred             HH
T ss_conf             99


No 189
>cd05125 Mth938_2P1-like Mth938_2P1-like domain. This model contains sequences that are similar to 2P1, a partially characterized nuclear protein, which is homologous to E3-3 from rat and known to be alternatively spliced. Its function is unknown. This family is part of the Mth938 family, for which structures, but no functional data are available.
Probab=21.08  E-value=52  Score=12.86  Aligned_cols=42  Identities=24%  Similarity=0.362  Sum_probs=27.4

Q ss_pred             HCCEEEEECCCCCCC-CHHHHHHHHHHHCCCCCCEEEEECCCHHHH
Q ss_conf             868999945788754-600588886320268773589841420358
Q gi|254781019|r   70 LIDTLFFATESSVDQ-SKSAAIWLHKLLGLNSSCRVVELKQACYSA  114 (396)
Q Consensus        70 ~Id~li~~T~t~~~~-~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~  114 (396)
                      .+|.|++||-..... .|..-..+ +..|+  .+.++|...||.-|
T Consensus        54 ~peilliGtG~~~~~~~~~~~~~l-~~~gI--~vE~M~T~aAcrTy   96 (114)
T cd05125          54 RPEILVIGTGRKSRPLSPELRKYF-KKLGI--AVEVVDTRNACATF   96 (114)
T ss_pred             CCCEEEECCCCCCCCCCHHHHHHH-HHCCC--EEEEECHHHHHHHH
T ss_conf             999999866998778999999999-97599--17995839999998


No 190
>TIGR02771 TraF_Ti conjugative transfer signal peptidase TraF; InterPro: IPR014139   Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes . They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence . Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases .   Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base . The geometric orientations of the catalytic residues are similar between families, despite different protein folds . The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) , .   Peptidases are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry. Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins.   Families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule.    This entry contains the conjugative transfer signal peptidase (TraF), which belongs to MEROPS peptidase family S26, subfamily S26C (TraF signal peptidase, clan SF). It is found in operons that encode elements of conjugative transfer systems. This family is homologous to a broader family of signal (leader) peptidases such as LepB. This family is present in both Ti-type and I-type conjugative systems ..
Probab=20.93  E-value=52  Score=12.84  Aligned_cols=30  Identities=33%  Similarity=0.274  Sum_probs=22.5

Q ss_pred             CCCCCHHHHHHHH-HHHHCCCCCCCCEEEEEE
Q ss_conf             5432338999999-997157436988899984
Q gi|254781019|r  276 NSYTASLYIALIS-LLDHSSENLAGKRVGFFS  306 (396)
Q Consensus       276 N~~SASi~l~L~s-lLe~~~~~~~G~rIll~s  306 (396)
                      |+ |.|+|+.|.. +.+.+.+...|+-|++|=
T Consensus        30 N~-t~S~P~g~y~r~~~~~~~v~~G~yV~fcp   60 (183)
T TIGR02771        30 NT-TKSLPLGLYWRLTTSSKPVERGDYVVFCP   60 (183)
T ss_pred             EC-CCCCHHHHHHHHHHHCCCCCCCCEEEEEC
T ss_conf             30-34533776655653126877787789835


No 191
>cd00248 Mth938-like Mth938-like domain. The members of this family include: Mth938, 2P1, Xcr35, Rpa2829, and several uncharacterized sequences. Mth938 is a hypothetical protein encoded by the Methanobacterium thermoautotrophicum (Mth) genome. This protein crystallizes as a dimer, although it is monomeric in solution, with one disulfide bond in each monomer.  2P1 is a partially characterized nuclear protein which is homologous to E3-3 from rat and known to be alternately spliced. Xcr35 and Rpa2829 are hypothetical proteins of unknown function from the Xanthomonas campestris and Rhodopseudomonas palustris genomes, respectively, for which the crystal structures have been determined.
Probab=20.72  E-value=53  Score=12.81  Aligned_cols=60  Identities=18%  Similarity=0.318  Sum_probs=35.2

Q ss_pred             CCHHHHHHHHHHHHHHHCCHHHCCEEEEECCCCCCCCH-HHHHHHHHHHCCCCCCEEEEECCCHHHH
Q ss_conf             59999999999999972795786899994578875460-0588886320268773589841420358
Q gi|254781019|r   49 EDIVTMAAAAALPIMQNQDKNLIDTLFFATESSVDQSK-SAAIWLHKLLGLNSSCRVVELKQACYSA  114 (396)
Q Consensus        49 Ed~~tmA~~Aa~~~L~~~~~~~Id~li~~T~t~~~~~~-~~a~~v~~~Lgl~~~~~~~Di~~aC~g~  114 (396)
                      ++..++..+....+++.   ..++.|++||-......+ .....+ ...|.  .+.+++...||.-|
T Consensus        34 ~~~~~i~~~~l~~~l~~---~~peilliGtG~~~~~~~~~~~~~l-~~~gI--~~E~M~T~aAcrTf   94 (109)
T cd00248          34 TSLSDLDPEALLPLLAE---DRPDILLIGTGAEIAFLPRALRAAL-RAAGI--GVEVMSTGAACRTY   94 (109)
T ss_pred             CCHHHCCHHHHHHHHCC---CCCCEEEECCCCCCCCCCHHHHHHH-HHCCC--EEEEECHHHHHHHH
T ss_conf             88112799999999736---8984899865897778999999999-98799--49996709999999


No 192
>pfam00012 HSP70 Hsp70 protein. Hsp70 chaperones help to fold many proteins. Hsp70 assisted folding involves repeated cycles of substrate binding and release. Hsp70 activity is ATP dependent. Hsp70 proteins are made up of two regions: the amino terminus is the ATPase domain and the carboxyl terminus is the substrate binding region.
Probab=20.63  E-value=53  Score=12.80  Aligned_cols=37  Identities=8%  Similarity=-0.026  Sum_probs=30.8

Q ss_pred             HHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCCHHHH
Q ss_conf             9999999999999962988211012331145405788
Q gi|254781019|r  205 YLQSLEAVWHDYQKNKGHDFNDFQYFCYHQPFTRMAE  241 (396)
Q Consensus       205 y~~~~~~a~~~~l~~~g~~~~did~~v~H~p~~k~~~  241 (396)
                      .++.+...+++.++.++++.+||+.+++.-+..+|+.
T Consensus       304 l~~r~~~~i~~~L~~a~l~~~dId~ViLvGGssRiP~  340 (598)
T pfam00012       304 LFERTLEPVEKALKDAKLSKSEIDEVVLVGGSTRIPA  340 (598)
T ss_pred             HHHHHHHHHHHHHHHHCCCHHHEEEEEECCCCCCCHH
T ss_conf             9999999998789872899545125786188656768


No 193
>PRK09605 O-sialoglycoprotein endopeptidase/protein kinase; Reviewed
Probab=20.56  E-value=53  Score=12.79  Aligned_cols=78  Identities=12%  Similarity=0.152  Sum_probs=45.8

Q ss_pred             HHHHHHHHHHHHCC--HHHCCEEEEECCCCCCCCHHH--HHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCC-
Q ss_conf             99999999997279--578689999457887546005--8888632026877358984142035888998789999739-
Q gi|254781019|r   54 MAAAAALPIMQNQD--KNLIDTLFFATESSVDQSKSA--AIWLHKLLGLNSSCRVVELKQACYSATCALHMACALVAKS-  128 (396)
Q Consensus        54 mA~~Aa~~~L~~~~--~~~Id~li~~T~t~~~~~~~~--a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~i~sg-  128 (396)
                      -....++++|++++  ++|||.|-+  +.+|-..++.  -...++.|.+.-+.+.+-++| |-|=+.     ...+.++ 
T Consensus        52 ~i~~vv~~aL~~A~i~~~dIdaIA~--T~GPGL~g~L~VG~~~Ak~La~~~~~PligVnH-~~gHi~-----~~rl~~~~  123 (536)
T PRK09605         52 AIPKVIKEALEEAGIKKGDIDLVAF--SQGPGLGPCLRVVATAARALALSLDVPLIGVNH-CIAHVE-----IGRLTTGA  123 (536)
T ss_pred             HHHHHHHHHHHHCCCCHHHCCEEEE--CCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCH-HHHHHH-----HHHHCCCC
T ss_conf             9999999999984999888989999--069981786899999999999984998500340-898874-----42310698


Q ss_pred             CCCEEEEEECC
Q ss_conf             99769995033
Q gi|254781019|r  129 PERKVLIVASD  139 (396)
Q Consensus       129 ~~~~aLVV~sD  139 (396)
                      ...-+|+|+.-
T Consensus       124 ~~Pl~L~VSGG  134 (536)
T PRK09605        124 RDPVTLYVSGG  134 (536)
T ss_pred             CCCCEEEEECC
T ss_conf             78856999768


No 194
>cd06449 ACCD Aminocyclopropane-1-carboxylate deaminase (ACCD): Pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of 1-aminocyclopropane-L-carboxylate (ACC), a precursor of the plant hormone ethylene, to alpha-ketobutyrate and ammonia.
Probab=20.44  E-value=53  Score=12.78  Aligned_cols=34  Identities=24%  Similarity=0.369  Sum_probs=28.4

Q ss_pred             CCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEC
Q ss_conf             38543233899999999715743698889998407
Q gi|254781019|r  274 IGNSYTASLYIALISLLDHSSENLAGKRVGFFSYG  308 (396)
Q Consensus       274 ~GN~~SASi~l~L~slLe~~~~~~~G~rIll~syG  308 (396)
                      +-.+|||-.+.+|..++. .++..+|++|+++--|
T Consensus       273 lDPvYTgKa~~gl~~~i~-~g~~~~~~~IlfiHTG  306 (307)
T cd06449         273 TDPVYEGKSMQGMIDLVR-NGEFKEGSKVLFIHLG  306 (307)
T ss_pred             CCCHHHHHHHHHHHHHHH-CCCCCCCCCEEEEECC
T ss_conf             370278999999999998-6999997918999599


No 195
>PRK05305 phosphatidylserine decarboxylase; Provisional
Probab=20.34  E-value=54  Score=12.77  Aligned_cols=22  Identities=27%  Similarity=0.504  Sum_probs=17.0

Q ss_pred             HHCCCCCCCCEEEEEEECCCCC
Q ss_conf             7157436988899984079830
Q gi|254781019|r  291 DHSSENLAGKRVGFFSYGSGCV  312 (396)
Q Consensus       291 e~~~~~~~G~rIll~syGsG~~  312 (396)
                      +....++.|+|+++.-|||-.+
T Consensus       163 ~~g~~l~~G~r~G~I~fGSrvd  184 (214)
T PRK05305        163 EEGDELERGERFGLIRFGSRVD  184 (214)
T ss_pred             CCCCEEECCCEEEEEECCCCEE
T ss_conf             7897885377773796087279


Done!