HHsearch alignment for GI: 254781019 and conserved domain: pfam00108

>pfam00108 Thiolase_N Thiolase, N-terminal domain. Thiolase is reported to be structurally related to beta-ketoacyl synthase (pfam00109), and also chalcone synthase.

Probab=98.75  E-value=2.1e-07  Score=65.06  Aligned_cols=99  Identities=14%  Similarity=0.148  Sum_probs=85.2

Q ss_pred             CCCCHHHHHHHHHHHHHHHC--CHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHH
Q ss_conf             98599999999999999727--9578689999457887546005888863202687735898414203588899878999
Q gi|254781019|r   47 PDEDIVTMAAAAALPIMQNQ--DKNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMACAL  124 (396)
Q Consensus        47 ~~Ed~~tmA~~Aa~~~L~~~--~~~~Id~li~~T~t~~~~~~~~a~~v~~~Lgl~~~~~~~Di~~aC~g~~~AL~~A~~~  124 (396)
T Consensus        22 ~~~~~~~L~~~~~~~~l~r~~~~p~~Id~vi~G~~~~~g~~~n~aR~~~l~aGlp~~vp~~tvnr~C~Sgl~Ai~~Aa~~  101 (264)
T pfam00108        22 KDLSAVDLGAIAIKAALERAGVKPEDVDEVIMGNVLQAGEGQNPARQAALKAGIPDSVPAVTINKVCGSGLKAVALAAQA  101 (264)
T ss_pred             CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHH
T ss_conf             88988999999999999985999688356888436656776629999999769998886689823201799999999999


Q ss_pred             HHCCCCCEEEEEECCCCCCCC
Q ss_conf             973999769995033201458
Q gi|254781019|r  125 VAKSPERKVLIVASDVARYDL  145 (396)
Q Consensus       125 i~sg~~~~aLVV~sD~~~~~~  145 (396)
T Consensus       102 I~~G~~dv~iagGvEsmS~~P  122 (264)
T pfam00108       102 IRAGDADIVVAGGVESMSNAP  122 (264)
T ss_pred             HHCCCCCEEEEECCCCCCCCC
T ss_conf             837987667872213565452