HHsearch alignment for GI: 254781019 and conserved domain: pfam02797
>pfam02797 Chal_sti_synt_C Chalcone and stilbene synthases, C-terminal domain. This domain of chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in the N-terminal domain.
Probab=99.23 E-value=6.7e-11 Score=86.76 Aligned_cols=116 Identities=13% Similarity=0.109 Sum_probs=88.1
Q ss_pred CCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 54235660169899999999999999962988211012331145405788888641102454410013455543334445
Q gi|254781019|r 192 RTALVDGKYSTKIYLQSLEAVWHDYQKNKGHDFNDFQYFCYHQPFTRMAEKAHIRLSKIVHQNLSVAEIEKAIGITTLYN 271 (396)
Q Consensus 192 ~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~~did~~v~H~p~~k~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~ 271 (396)
T Consensus 25 Gf~~~Ls~~VP~~i~~~l~~~v~~~L~~~gl~~~d~~~wa~HPGG~~Ilda~~~~L~L~----------~~~l~~Sr~vL 94 (151)
T pfam02797 25 GLTFHLLKDVPQLISKNIEKCLVEAFDPLGISDWNSIFWIAHPGGPAILDQVEAKLGLK----------PEKLRASRHVL 94 (151)
T ss_pred CEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHCCCC----------HHHHHHHHHHH
T ss_conf 88999882636999998999999999874998332452788799789999999981999----------89999999999
Q ss_pred HHCCCCCCCHHHHHHHHHHHHC---CCCCCC---CEEEEEEECCCCCEEEEE
Q ss_conf 3238543233899999999715---743698---889998407983037787
Q gi|254781019|r 272 RLIGNSYTASLYIALISLLDHS---SENLAG---KRVGFFSYGSGCVAEFFS 317 (396)
Q Consensus 272 ~~~GN~~SASi~l~L~slLe~~---~~~~~G---~rIll~syGsG~~a~~f~ 317 (396)
T Consensus 95 ~~~GNmSS~tVlfVLe~~~~~~~~~~~~~~g~~~e~gl~~AfGPG~t~E~~L 146 (151)
T pfam02797 95 SEYGNMSSACVLFILDEMRKKSLKKGKSTTGEGLEWGVLFGFGPGLTVETVV 146 (151)
T ss_pred HHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCHHHHHHH
T ss_conf 9758618999999999999766444788888886568999968829999999