HHsearch alignment for GI: 254781019 and conserved domain: smart00825
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=98.94 E-value=1.3e-07 Score=66.32 Aligned_cols=216 Identities=16% Similarity=0.164 Sum_probs=125.1
Q ss_pred HHHHHHHHHHHHHCC--HHHCC----EEEEECCCCCCCC------------------HH-HHHHHHHHHCCCCCCEEEEE
Q ss_conf 999999999997279--57868----9999457887546------------------00-58888632026877358984
Q gi|254781019|r 53 TMAAAAALPIMQNQD--KNLID----TLFFATESSVDQS------------------KS-AAIWLHKLLGLNSSCRVVEL 107 (396)
Q Consensus 53 tmA~~Aa~~~L~~~~--~~~Id----~li~~T~t~~~~~------------------~~-~a~~v~~~Lgl~~~~~~~Di 107 (396)
T Consensus 89 rl~L~~a~~Al~dAG~~~~~l~~~r~GV~vG~~~~d~~~~~~~~~~~~~~~~~~~~~~s~~a~ris~~~~l~Gp--~~~v 166 (424)
T smart00825 89 RLLLEVAWEALEDAGIDPESLRGSRTGVFVGAMSSDYAELLARDPEDIEGYAATGTARSFIANRISYFFDLRGP--SVTV 166 (424)
T ss_pred HHHHHHHHHHHHHCCCCHHHCCCCCEEEEEEECCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC--EEEE
T ss_conf 99999999999973998356588743899975166377776417555785202453176899999998589996--3514
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC-------------CCCCCC--------CCCCCCEEEEEECCC-
Q ss_conf 1420358889987899997399976999503320145-------------888753--------347830246884268-
Q gi|254781019|r 108 KQACYSATCALHMACALVAKSPERKVLIVASDVARYD-------------LGSSGE--------PTQGCGAVAILISSQ- 165 (396)
Q Consensus 108 ~~aC~g~~~AL~~A~~~i~sg~~~~aLVV~sD~~~~~-------------~~~~~~--------~t~GaGA~Allv~~~- 165 (396)
T Consensus 167 dtACsSsl~Al~~A~~~i~~G~~D~alvGg~~~~~~p~~~~~~~~~~~lS~~g~~rpFD~~adG~v~gEGa~~lvLk~l~ 246 (424)
T smart00825 167 DTACSSSLVALHLACQSLRSGECDMALAGGVNLILSPDTFVGFSRAGMLSPDGRCKTFDADADGYVRGEGVGVVVLKRLS 246 (424)
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHH
T ss_conf 14728999999999999976996330014266734878999986157879999875577889984104765799746599
Q ss_pred ------CCCCEEEECCCCCCCC-CCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCCH
Q ss_conf ------7630353100015678-651127588754235660169899999999999999962988211012331145405
Q gi|254781019|r 166 ------TSILEIEDITGIYTND-CMDFWRPNYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHDFNDFQYFCYHQPFTR 238 (396)
Q Consensus 166 ------~~~~~~~~~~~~~~~~-~~df~rp~~~~~~~~dg~~~~~~y~~~~~~a~~~~l~~~g~~~~did~~v~H~p~~k 238 (396)
T Consensus 247 ~A~~~g~~Iya~I~G~~~~~dG~~~~~~~P~----------------~~~~~~~~~~Al~~a~i~p~~I~yieaHgtgt~ 310 (424)
T smart00825 247 DALRDGDPILAVIRGSAVNQDGRSNGLTAPS----------------GPAQARLIRQALARAGVDPADVDYVEAHGTGTP 310 (424)
T ss_pred HHHHCCCCEEEEEECEEEECCCCCCCCCCCC----------------HHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCC
T ss_conf 9987699179999343782589878778999----------------899999999999982989664687996036687
Q ss_pred HHHHHHHHHCCHH-HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
Q ss_conf 7888886411024-544100134555433344453238543233899999999
Q gi|254781019|r 239 MAEKAHIRLSKIV-HQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALISLL 290 (396)
Q Consensus 239 ~~~~~~~~l~~~~-~~~~~~~~~e~~~~~~~~~~~~~GN~~SASi~l~L~slL 290 (396)
T Consensus 311 ~gD~~E~~al~~~f~~~~~---~~~~~~-igS~K~~~GH~~~AaG~~~lik~~ 359 (424)
T smart00825 311 LGDPIEAEALAAVFGQGRP---RDGPLL-LGSVKSNIGHLEAAAGVAGLIKVV 359 (424)
T ss_pred CCCHHHHHHHHHHHCCCCC---CCCCEE-ECCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 7799999999999623688---778425-204534423337778999999999