BLAST/PSIBLAST alignment of GI: 254781019 and GI: 54024181 at iteration 1
>gi|54024181|ref|YP_118423.1| putative 3-hydroxy-3-methylglutaryl-CoA synthase [Nocardia farcinica IFM 10152] Length = 403
>gi|54015689|dbj|BAD57059.1| putative 3-hydroxy-3-methylglutaryl-CoA synthase [Nocardia farcinica IFM 10152] Length = 403
Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust.
Identities = 195/385 (50%), Positives = 256/385 (66%), Gaps = 1/385 (0%)
Query: 2 AIGIEDISFYTTNQYLDLSVIAEKYRLDVAKFYVGIGQERMSVLNPDEDIVTMAAAAALP 61
A+GI D+SF TT+ LD ++A++ +DV KF +GIGQE MSV DED+VT+AAAAA P
Sbjct: 5 AVGIHDLSFATTHYALDHVLLADRLGVDVDKFRLGIGQETMSVAAADEDVVTLAAAAAAP 64
Query: 62 IMQNQDKNLIDTLFFATESSVDQSKSAAIWLHKLLGLNSSCRVVELKQACYSATCALHMA 121
+++ I T+ ATES VDQSKSA ++LH L+GL +S RVVELKQACY T L A
Sbjct: 65 VLERHGAEGIRTVLLATESGVDQSKSAGLYLHPLIGLPNSARVVELKQACYGGTAGLQFA 124
Query: 122 CALVAKSPERKVLIVASDVARYDLGSSGEPTQGCGAVAILISSQTSILEIEDITGIYTND 181
L+A+ P ++VL++A+DVA+YDL S GEPTQG AVA+L+++ I+ IE +G+Y+ D
Sbjct: 125 AGLIARDPTQRVLVIAADVAKYDLDSPGEPTQGAAAVAMLVTADPGIVAIETPSGLYSAD 184
Query: 182 CMDFWRPNYRRTALVDGKYSTKIYLQSLEAVWHDYQKNKGHDFNDFQYFCYHQPFTRMAE 241
MDFWRPNYR ALVDGK S Y ++ + W DY++ G D +F FCYHQPFTRMA
Sbjct: 185 IMDFWRPNYRSAALVDGKTSVNAYQKAAQEAWSDYRRRGGRDLGEFAAFCYHQPFTRMAY 244
Query: 242 KAHIRLSKIVHQNLSVAEIEKAIGITTLYNRLIGNSYTASLYIALISLLDHSSENLAGKR 301
KAH L + IE A+ TT YNR +GNSYTASLY+ L+SLLDH +++L+G+
Sbjct: 245 KAHRHLLESQGHRADPDAIESAVAHTTHYNRTVGNSYTASLYLGLMSLLDH-ADDLSGRP 303
Query: 302 VGFFSYGSGCVAEFFSGIVQKNYRKKSHQKRHQHIINSRIPISYQVYCDLHQDIIPSVEG 361
+ F SYGSG VAEFF G+V YR+ + + I +R P+ Y Y LH+ P+
Sbjct: 304 LAFVSYGSGSVAEFFGGVVVPGYRRHLRTETTRAAIATREPLGYDEYRALHEAGTPTDGR 363
Query: 362 NCTIPHTTTGPFRLATIQNHKRIYE 386
+P T PFRLA I HKRIYE
Sbjct: 364 YHALPAQTRRPFRLAAISGHKRIYE 388