HHsearch alignment for GI: 254781020 and conserved domain: COG0134
>COG0134 TrpC Indole-3-glycerol phosphate synthase [Amino acid transport and metabolism].
Probab=98.17 E-value=0.00013 Score=45.45 Aligned_cols=95 Identities=16% Similarity=0.205 Sum_probs=64.1
Q ss_pred HHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHCCCCCCCCHHHHHCCCCHHHHHHHHHH
Q ss_conf 99999873997178504786688999999976997999458888651001231023443232443106346889999985
Q gi|254781020|r 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP 254 (337)
Q Consensus 175 i~~l~~~~~~pii~k~v~~~~~~~~~~~a~~aGad~i~v~~~gG~~~~~~~~~r~~~~~~~~~~~~~gi~~~~al~~~~~ 254 (337)
T Consensus 148 l~~~A~~LGm~~LVE----Vh~~eEl~rAl~~ga~iIGINnRdL~tf~v------------------dl~~t~~la--~~ 203 (254)
T COG0134 148 LVDRAHELGMEVLVE----VHNEEELERALKLGAKIIGINNRDLTTLEV------------------DLETTEKLA--PL 203 (254)
T ss_pred HHHHHHHCCCCEEEE----ECCHHHHHHHHHCCCCEEEEECCCCCHHEE------------------CHHHHHHHH--HH
T ss_conf 999999769923899----789999999996799889983788402100------------------688999988--44
Q ss_pred HCCCCEEEECCCCCCHHHHHHHHHHCCCEEHHHHHHHHH
Q ss_conf 228987997298888899999998388852334799998
Q gi|254781020|r 255 YCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 (337)
Q Consensus 255 ~~~~v~IiadGGIr~g~Dv~kAlalGAdaV~iGr~~l~~ 293 (337)
T Consensus 204 ~p~~~~~IsESGI~~~~dv~~l~~~ga~a~LVG~slM~~ 242 (254)
T COG0134 204 IPKDVILISESGISTPEDVRRLAKAGADAFLVGEALMRA 242 (254)
T ss_pred CCCCCEEEECCCCCCHHHHHHHHHCCCCEEEECHHHHCC
T ss_conf 877758996179899999999997489989963888569